BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011180
(491 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 204 bits (520), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 183/304 (60%), Gaps = 17/304 (5%)
Query: 119 QLRKFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD 178
QL++F +L++A+ NF +++LG GGFG V+KG + G VAVK L +
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKG----------RLADGTLVAVKRLKEE 73
Query: 179 GLQGHK-EWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK--GS 235
QG + ++ EV + +H NL++L G+C+ +RLLVY +M GS+ + L +
Sbjct: 74 RXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ 133
Query: 236 LPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAP 295
PL W R +IALG+A+GLA+LH+ + +I+RD K +NILLD ++ A + DFGLAK
Sbjct: 134 PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LM 192
Query: 296 EDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
+ HV V GT G+ APEY+ TG + K+DV+ +GV+LLE++TG+R+ D R +
Sbjct: 193 DYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD 252
Query: 356 N--LVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVV 413
+ L++W + L +K + L+D L+G++ + ++ Q+A C P RP+MSEVV
Sbjct: 253 DVMLLDWVKGLLKEK-KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 311
Query: 414 ETLK 417
L+
Sbjct: 312 RMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 182/304 (59%), Gaps = 17/304 (5%)
Query: 119 QLRKFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD 178
QL++F +L++A+ NF +++LG GGFG V+KG + G VAVK L +
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKG----------RLADGXLVAVKRLKEE 65
Query: 179 GLQGHK-EWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK--GS 235
QG + ++ EV + +H NL++L G+C+ +RLLVY +M GS+ + L +
Sbjct: 66 RTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ 125
Query: 236 LPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAP 295
PL W R +IALG+A+GLA+LH+ + +I+RD K +NILLD ++ A + DFGLAK
Sbjct: 126 PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LM 184
Query: 296 EDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
+ HV V G G+ APEY+ TG + K+DV+ +GV+LLE++TG+R+ D R +
Sbjct: 185 DYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD 244
Query: 356 N--LVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVV 413
+ L++W + L +K + L+D L+G++ + ++ Q+A C P RP+MSEVV
Sbjct: 245 DVMLLDWVKGLLKEK-KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 303
Query: 414 ETLK 417
L+
Sbjct: 304 RMLE 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/301 (37%), Positives = 175/301 (58%), Gaps = 18/301 (5%)
Query: 127 DLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 186
DL+ AT NF + L+G G FG V+KG + + G VA+K + QG +E+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRD----------GAKVALKRRTPESSQGIEEF 82
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKG--SLPLPWSIRM 244
E+ L HP+LV L+G+C E ++ +L+Y++M G+L+ HL+ ++ + W R+
Sbjct: 83 ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
+I +GAA+GL +LH A +I+RD K+ NILLD ++ K++DFG++K E G+TH+
Sbjct: 143 EICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXX 199
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWA-RP 363
V GT GY PEY + G LT KSDVYSFGVVL E+L R ++ ++ P NL EWA
Sbjct: 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES 259
Query: 364 HLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPLQNLK 423
H + + +++DP L + +K A +CL+ + RP M +V+ L+ L+
Sbjct: 260 H--NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317
Query: 424 D 424
+
Sbjct: 318 E 318
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/301 (36%), Positives = 174/301 (57%), Gaps = 18/301 (5%)
Query: 127 DLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 186
DL+ AT NF + L+G G FG V+KG + + G VA+K + QG +E+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRD----------GAKVALKRRTPESSQGIEEF 82
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKG--SLPLPWSIRM 244
E+ L HP+LV L+G+C E ++ +L+Y++M G+L+ HL+ ++ + W R+
Sbjct: 83 ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
+I +GAA+GL +LH A +I+RD K+ NILLD ++ K++DFG++K E +TH+
Sbjct: 143 EICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXX 199
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWA-RP 363
V GT GY PEY + G LT KSDVYSFGVVL E+L R ++ ++ P NL EWA
Sbjct: 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES 259
Query: 364 HLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPLQNLK 423
H + + +++DP L + +K A +CL+ + RP M +V+ L+ L+
Sbjct: 260 H--NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317
Query: 424 D 424
+
Sbjct: 318 E 318
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/309 (35%), Positives = 172/309 (55%), Gaps = 21/309 (6%)
Query: 118 SQLRKFMFNDLKLATRNF--RPESL----LGEGGFGCVFKGWVEENGTAPVKPGTGLTVA 171
++ F F +LK T NF RP S+ +GEGGFG V+KG+V A K + +
Sbjct: 10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDIT 69
Query: 172 VKTLNHDGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL- 230
+ L +++ E+ + H NLV+L+G+ + D LVY +MP GSL + L
Sbjct: 70 TEELK-------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS 122
Query: 231 FRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGL 290
G+ PL W +R KIA GAA G+ FLHE I+RD K++NILLD + AK+SDFGL
Sbjct: 123 CLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGL 179
Query: 291 AKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNR 350
A+ + + +T + +R++GT Y APE + G +T KSD+YSFGVVLLE++TG ++D++R
Sbjct: 180 ARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR 238
Query: 351 PNGEHNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMS 410
L++ +++ +D ++ S + +A+QCL RP +
Sbjct: 239 E--PQLLLDIKEEIEDEEKTIEDYIDKKMNDADS-TSVEAMYSVASQCLHEKKNKRPDIK 295
Query: 411 EVVETLKPL 419
+V + L+ +
Sbjct: 296 KVQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/309 (35%), Positives = 171/309 (55%), Gaps = 21/309 (6%)
Query: 118 SQLRKFMFNDLKLATRNF--RPESL----LGEGGFGCVFKGWVEENGTAPVKPGTGLTVA 171
++ F F +LK T NF RP S+ +GEGGFG V+KG+V A K + +
Sbjct: 10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDIT 69
Query: 172 VKTLNHDGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL- 230
+ L +++ E+ + H NLV+L+G+ + D LVY +MP GSL + L
Sbjct: 70 TEELK-------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS 122
Query: 231 FRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGL 290
G+ PL W +R KIA GAA G+ FLHE I+RD K++NILLD + AK+SDFGL
Sbjct: 123 CLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGL 179
Query: 291 AKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNR 350
A+ + + +T + R++GT Y APE + G +T KSD+YSFGVVLLE++TG ++D++R
Sbjct: 180 ARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR 238
Query: 351 PNGEHNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMS 410
L++ +++ +D ++ S + +A+QCL RP +
Sbjct: 239 E--PQLLLDIKEEIEDEEKTIEDYIDKKMNDADS-TSVEAMYSVASQCLHEKKNKRPDIK 295
Query: 411 EVVETLKPL 419
+V + L+ +
Sbjct: 296 KVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 170/309 (55%), Gaps = 21/309 (6%)
Query: 118 SQLRKFMFNDLKLATRNF--RPESL----LGEGGFGCVFKGWVEENGTAPVKPGTGLTVA 171
++ F F +LK T NF RP S+ +GEGGFG V+KG+V A K + +
Sbjct: 4 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDIT 63
Query: 172 VKTLNHDGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL- 230
+ L +++ E+ + H NLV+L+G+ + D LVY +MP GSL + L
Sbjct: 64 TEELK-------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS 116
Query: 231 FRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGL 290
G+ PL W +R KIA GAA G+ FLHE I+RD K++NILLD + AK+SDFGL
Sbjct: 117 CLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGL 173
Query: 291 AKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNR 350
A+ + + + + R++GT Y APE + G +T KSD+YSFGVVLLE++TG ++D++R
Sbjct: 174 ARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR 232
Query: 351 PNGEHNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMS 410
L++ +++ +D ++ S + +A+QCL RP +
Sbjct: 233 E--PQLLLDIKEEIEDEEKTIEDYIDKKMNDADS-TSVEAMYSVASQCLHEKKNKRPDIK 289
Query: 411 EVVETLKPL 419
+V + L+ +
Sbjct: 290 KVQQLLQEM 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 164/307 (53%), Gaps = 21/307 (6%)
Query: 118 SQLRKFMFNDLKLATRNF--RPESL----LGEGGFGCVFKGWVEENGTAPVKPGTGLTVA 171
++ F F +LK T NF RP S+ GEGGFG V+KG+V A K + +
Sbjct: 1 TRFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDIT 60
Query: 172 VKTLNHDGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL- 230
+ L +++ E+ H NLV+L+G+ + D LVY + P GSL + L
Sbjct: 61 TEELK-------QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLS 113
Query: 231 FRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGL 290
G+ PL W R KIA GAA G+ FLHE I+RD K++NILLD + AK+SDFGL
Sbjct: 114 CLDGTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGL 170
Query: 291 AKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNR 350
A+ + + + +R++GT Y APE + G +T KSD+YSFGVVLLE++TG ++D++R
Sbjct: 171 ARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR 229
Query: 351 PNGEHNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMS 410
L++ +++ +D + S + +A+QCL RP +
Sbjct: 230 E--PQLLLDIKEEIEDEEKTIEDYIDKKXNDADS-TSVEAXYSVASQCLHEKKNKRPDIK 286
Query: 411 EVVETLK 417
+V + L+
Sbjct: 287 KVQQLLQ 293
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 142/298 (47%), Gaps = 34/298 (11%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 188
LA E +G+GGFG V KG V++ +K L + + ++ +E+
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIK---SLILGDSEGETEMIEKFQEFQR 72
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL 248
EV + NL HPN+VKL G + + +V EF+P G L + L K P+ WS+++++ L
Sbjct: 73 EVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAH-PIKWSVKLRLML 129
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILL-----DADYNAKLSDFGLAKDAPEDGKTHVS 303
A G+ ++ + P+++RD ++ NI L +A AK++DFGL++ + H
Sbjct: 130 DIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS-----VHSV 183
Query: 304 TRVMGTYGYAAPEYVMTGH--LTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWA 361
+ ++G + + APE + T K+D YSF ++L +LTG D+ G+ +
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS-YGKIKFINMI 242
Query: 362 RPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
R G + PRL + C S DPK RP S +V+ L L
Sbjct: 243 REE-GLRPTIPEDCPPRLRNVIEL------------CWSGDPKKRPHFSYIVKELSEL 287
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 141/292 (48%), Gaps = 43/292 (14%)
Query: 133 RNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVN 191
+ E ++G G FG V K W ++ VA+K + + + K ++ E+
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWRAKD------------VAIKQIESESER--KAFIVELR 54
Query: 192 FLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPW---SIRMKIAL 248
L + HPN+VKL G C+ + LV E+ GSL N L G+ PLP+ + M L
Sbjct: 55 QLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVL--HGAEPLPYYTAAHAMSWCL 110
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNA-KLSDFGLAKDAPEDGKTHVSTRVM 307
++G+A+LH K +I+RD K N+LL A K+ DFG A D +TH+ T
Sbjct: 111 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI----QTHM-TNNK 165
Query: 308 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
G+ + APE + + K DV+S+G++L E++T R+ D+ G + WA H G
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWAV-HNGT 222
Query: 368 KRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
+ + L +E L +C S+DP RP M E+V+ + L
Sbjct: 223 RPPLIKNLPKPIES------------LMTRCWSKDPSQRPSMEEIVKIMTHL 262
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 134/280 (47%), Gaps = 34/280 (12%)
Query: 141 LGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
+G G FG V G W+ ++ VA+KT+ +G ++++ E + L HP
Sbjct: 15 IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 62
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LV+L G C+E LV+EFM G L ++L + L ++ + + L +G+A+L E
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEE 121
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+ VI+RD N L+ + K+SDFG+ + +D T ST +A+PE
Sbjct: 122 AS---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFS 177
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPRL 379
+SKSDV+SFGV++ E+ + + +NR N E +VE D +RL PRL
Sbjct: 178 FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VVE-------DISTGFRLYKPRL 228
Query: 380 EGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
S Q+ C P+ RP S ++ L +
Sbjct: 229 -------ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAAI 261
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 141/292 (48%), Gaps = 43/292 (14%)
Query: 133 RNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVN 191
+ E ++G G FG V K W ++ VA+K + + + K ++ E+
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWRAKD------------VAIKQIESESER--KAFIVELR 53
Query: 192 FLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPW---SIRMKIAL 248
L + HPN+VKL G C+ + LV E+ GSL N L G+ PLP+ + M L
Sbjct: 54 QLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVL--HGAEPLPYYTAAHAMSWCL 109
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNA-KLSDFGLAKDAPEDGKTHVSTRVM 307
++G+A+LH K +I+RD K N+LL A K+ DFG A D +TH+ T
Sbjct: 110 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI----QTHM-TNNK 164
Query: 308 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
G+ + APE + + K DV+S+G++L E++T R+ D+ G + WA H G
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWAV-HNGT 221
Query: 368 KRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
+ + L +E L +C S+DP RP M E+V+ + L
Sbjct: 222 RPPLIKNLPKPIES------------LMTRCWSKDPSQRPSMEEIVKIMTHL 261
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 141/298 (47%), Gaps = 34/298 (11%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 188
LA E +G+GGFG V KG V++ +K L + + ++ +E+
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIK---SLILGDSEGETEMIEKFQEFQR 72
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL 248
EV + NL HPN+VKL G + + +V EF+P G L + L K P+ WS+++++ L
Sbjct: 73 EVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAH-PIKWSVKLRLML 129
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILL-----DADYNAKLSDFGLAKDAPEDGKTHVS 303
A G+ ++ + P+++RD ++ NI L +A AK++DFG ++ + H
Sbjct: 130 DIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQS-----VHSV 183
Query: 304 TRVMGTYGYAAPEYVMTGH--LTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWA 361
+ ++G + + APE + T K+D YSF ++L +LTG D+ G+ +
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS-YGKIKFINMI 242
Query: 362 RPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
R G + PRL + C S DPK RP S +V+ L L
Sbjct: 243 REE-GLRPTIPEDCPPRLRNVIEL------------CWSGDPKKRPHFSYIVKELSEL 287
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 133/280 (47%), Gaps = 34/280 (12%)
Query: 141 LGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
+G G FG V G W+ ++ VA+KT+ +G ++++ E + L HP
Sbjct: 15 IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 62
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LV+L G C+E LV+EFM G L ++L + L ++ + + L +G+A+L E
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEE 121
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
VI+RD N L+ + K+SDFG+ + +D T ST +A+PE
Sbjct: 122 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFS 177
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPRL 379
+SKSDV+SFGV++ E+ + + +NR N E +VE D +RL PRL
Sbjct: 178 FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VVE-------DISTGFRLYKPRL 228
Query: 380 EGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
S Q+ C P+ RP S ++ L +
Sbjct: 229 -------ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 261
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 141/298 (47%), Gaps = 34/298 (11%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 188
LA E +G+GGFG V KG V++ +K L + + ++ +E+
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIK---SLILGDSEGETEMIEKFQEFQR 72
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL 248
EV + NL HPN+VKL G + + +V EF+P G L + L K P+ WS+++++ L
Sbjct: 73 EVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAH-PIKWSVKLRLML 129
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILL-----DADYNAKLSDFGLAKDAPEDGKTHVS 303
A G+ ++ + P+++RD ++ NI L +A AK++DF L++ + H
Sbjct: 130 DIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS-----VHSV 183
Query: 304 TRVMGTYGYAAPEYVMTGH--LTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWA 361
+ ++G + + APE + T K+D YSF ++L +LTG D+ G+ +
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS-YGKIKFINMI 242
Query: 362 RPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
R G + PRL + C S DPK RP S +V+ L L
Sbjct: 243 REE-GLRPTIPEDCPPRLRNVIEL------------CWSGDPKKRPHFSYIVKELSEL 287
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 133/280 (47%), Gaps = 34/280 (12%)
Query: 141 LGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
+G G FG V G W+ ++ VA+KT+ +G ++++ E + L HP
Sbjct: 18 IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 65
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LV+L G C+E LV+EFM G L ++L + L ++ + + L +G+A+L E
Sbjct: 66 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEE 124
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
VI+RD N L+ + K+SDFG+ + +D T ST +A+PE
Sbjct: 125 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFS 180
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPRL 379
+SKSDV+SFGV++ E+ + + +NR N E +VE D +RL PRL
Sbjct: 181 FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VVE-------DISTGFRLYKPRL 231
Query: 380 EGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
S Q+ C P+ RP S ++ L +
Sbjct: 232 -------ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 264
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 133/280 (47%), Gaps = 34/280 (12%)
Query: 141 LGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
+G G FG V G W+ ++ VA+KT+ +G ++++ E + L HP
Sbjct: 13 IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 60
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LV+L G C+E LV+EFM G L ++L + L ++ + + L +G+A+L E
Sbjct: 61 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEE 119
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
VI+RD N L+ + K+SDFG+ + +D T ST +A+PE
Sbjct: 120 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFS 175
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPRL 379
+SKSDV+SFGV++ E+ + + +NR N E +VE D +RL PRL
Sbjct: 176 FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VVE-------DISTGFRLYKPRL 226
Query: 380 EGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
S Q+ C P+ RP S ++ L +
Sbjct: 227 -------ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 259
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 132/280 (47%), Gaps = 34/280 (12%)
Query: 141 LGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
+G G FG V G W+ ++ VA+KT+ +G +++ E + L HP
Sbjct: 35 IGSGQFGLVHLGYWLNKD-----------KVAIKTIK-EGSMSEDDFIEEAEVMMKLSHP 82
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LV+L G C+E LV+EFM G L ++L + L ++ + + L +G+A+L E
Sbjct: 83 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEE 141
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
VI+RD N L+ + K+SDFG+ + +D T ST +A+PE
Sbjct: 142 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFS 197
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPRL 379
+SKSDV+SFGV++ E+ + + +NR N E +VE D +RL PRL
Sbjct: 198 FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VVE-------DISTGFRLYKPRL 248
Query: 380 EGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
S Q+ C P+ RP S ++ L +
Sbjct: 249 -------ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 281
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 132/280 (47%), Gaps = 34/280 (12%)
Query: 141 LGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
+G G FG V G W+ ++ VA+KT+ +G ++++ E + L HP
Sbjct: 16 IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 63
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LV+L G C+E LV EFM G L ++L + L ++ + + L +G+A+L E
Sbjct: 64 KLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEE 122
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
VI+RD N L+ + K+SDFG+ + +D T ST +A+PE
Sbjct: 123 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFS 178
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPRL 379
+SKSDV+SFGV++ E+ + + +NR N E +VE D +RL PRL
Sbjct: 179 FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VVE-------DISTGFRLYKPRL 229
Query: 380 EGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
S Q+ C P+ RP S ++ L +
Sbjct: 230 -------ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 111/218 (50%), Gaps = 32/218 (14%)
Query: 138 ESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA----EVNF 192
E ++G GGFG V++ W+ G VAVK HD + + + E
Sbjct: 12 EEIIGIGGFGKVYRAFWI------------GDEVAVKAARHDPDEDISQTIENVRQEAKL 59
Query: 193 LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
L HPN++ L G C+++ LV EF G L L K +P I + A+ A+
Sbjct: 60 FAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR---IPPDILVNWAVQIAR 116
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILL-----DADYN---AKLSDFGLAKDAPEDGKTHVST 304
G+ +LH+EA P+I+RD K+SNIL+ + D + K++DFGLA++ K +
Sbjct: 117 GMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAA- 175
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
G Y + APE + + SDV+S+GV+L E+LTG
Sbjct: 176 ---GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 139/297 (46%), Gaps = 33/297 (11%)
Query: 126 NDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK- 184
+D+ + + + +G G FG V + E +G+ VAVK L +
Sbjct: 30 DDMDIPWCDLNIKEKIGAGSFGTVHRA--EWHGS---------DVAVKILMEQDFHAERV 78
Query: 185 -EWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLP-LPWSI 242
E+L EV + L HPN+V +G + +V E++ RGSL L + G+ L
Sbjct: 79 NEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERR 138
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
R+ +A AKG+ +LH P+++RD K+ N+L+D Y K+ DFGL++ +
Sbjct: 139 RLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR--LKASXFLX 195
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWAR 362
S GT + APE + KSDVYSFGV+L E+ T + +P G N +
Sbjct: 196 SKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQ------QPWGNLNPAQ-VV 248
Query: 363 PHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
+G K + RL PR + + + C + +P RP + +++ L+PL
Sbjct: 249 AAVGFKCK--RLEIPR-------NLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 142/298 (47%), Gaps = 35/298 (11%)
Query: 126 NDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK- 184
+D+ + + + +G G FG V + E +G+ VAVK L +
Sbjct: 30 DDMDIPWCDLNIKEKIGAGSFGTVHRA--EWHGS---------DVAVKILMEQDFHAERV 78
Query: 185 -EWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLP-LPWSI 242
E+L EV + L HPN+V +G + +V E++ RGSL L + G+ L
Sbjct: 79 NEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERR 138
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
R+ +A AKG+ +LH P+++R+ K+ N+L+D Y K+ DFGL++ T +
Sbjct: 139 RLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR---LKASTFL 194
Query: 303 STR-VMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWA 361
S++ GT + APE + KSDVYSFGV+L E+ T + +P G N +
Sbjct: 195 SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQ------QPWGNLNPAQ-V 247
Query: 362 RPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
+G K + RL PR + + + C + +P RP + +++ L+PL
Sbjct: 248 VAAVGFKCK--RLEIPR-------NLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LGEG FG VF E +P K + VAVK L L K++ E L NL H +
Sbjct: 23 LGEGAFGKVFLA--ECYNLSPTK--DKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLF--------------RKGSLPLPWSIRMKI 246
+VK G C + D ++V+E+M G L L R+ L S + I
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
A A G+ +L A + ++RD T N L+ A+ K+ DFG+++D V
Sbjct: 139 ASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195
Query: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
M + PE +M T++SDV+SFGV+L E+ T
Sbjct: 196 MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LGEG FG VF E P + + VAVKTL K++ E L NL H +
Sbjct: 21 LGEGAFGKVFLA--ECYNLCPEQ--DKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHL---------FRKGSLP--LPWSIRMKIALG 249
+VK G C+E D ++V+E+M G L L +G+ P L S + IA
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
A G+ +L A + ++RD T N L+ + K+ DFG+++D V M
Sbjct: 137 IAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 193
Query: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ PE +M T++SDV+S GVVL E+ T
Sbjct: 194 IRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 145/325 (44%), Gaps = 45/325 (13%)
Query: 123 FMFNDLKLATRNF---------RPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVK 173
F F D A R F + E ++G G FG V G ++ G + VA+K
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREI------FVAIK 67
Query: 174 TLNHDGLQGHK-EWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFR 232
TL + + ++L+E + +G HPN++ L G + +++ EFM GSL++ L R
Sbjct: 68 TLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL-R 126
Query: 233 KGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAK 292
+ + + G A G+ +L A+ ++RD NIL++++ K+SDFGL++
Sbjct: 127 QNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSR 183
Query: 293 DAPEDGKTHVSTRVMG---TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT-GRRSMDK 348
+D T +G + APE + TS SDV+S+G+V+ E+++ G R
Sbjct: 184 FLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD 243
Query: 349 NRPNGEHNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPR 408
N +E + YRL P + QL C +D RP+
Sbjct: 244 MTNQDVINAIE----------QDYRLPPP-------MDCPSALHQLMLDCWQKDRNHRPK 286
Query: 409 MSEVVETLKPL----QNLKDMASSS 429
++V TL + +LK MA S
Sbjct: 287 FGQIVNTLDKMIRNPNSLKAMAPLS 311
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 18/208 (8%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLLH 198
++G G FGCV+ G + +N G + AVK+LN G ++L E + + H
Sbjct: 42 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 95
Query: 199 PNLVKLVGYCIEDDQR-LLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG--AAKGLA 255
PN++ L+G C+ + L+V +M G L N + + P +++ I G AKG+
Sbjct: 96 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMK 152
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA--PEDGKTHVSTRVMGTYGYA 313
FL A K ++RD N +LD + K++DFGLA+D E H T +
Sbjct: 153 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 209
Query: 314 APEYVMTGHLTSKSDVYSFGVVLLEMLT 341
A E + T T+KSDV+SFGV+L E++T
Sbjct: 210 ALESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 18/208 (8%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLLH 198
++G G FGCV+ G + +N G + AVK+LN G ++L E + + H
Sbjct: 38 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 199 PNLVKLVGYCIEDDQR-LLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG--AAKGLA 255
PN++ L+G C+ + L+V +M G L N + + P +++ I G AKG+
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMK 148
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA--PEDGKTHVSTRVMGTYGYA 313
FL A K ++RD N +LD + K++DFGLA+D E H T +
Sbjct: 149 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 205
Query: 314 APEYVMTGHLTSKSDVYSFGVVLLEMLT 341
A E + T T+KSDV+SFGV+L E++T
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 18/208 (8%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLLH 198
++G G FGCV+ G + +N G + AVK+LN G ++L E + + H
Sbjct: 35 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 199 PNLVKLVGYCIEDD-QRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG--AAKGLA 255
PN++ L+G C+ + L+V +M G L N + + P +++ I G AKG+
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMK 145
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA--PEDGKTHVSTRVMGTYGYA 313
FL A K ++RD N +LD + K++DFGLA+D E H T +
Sbjct: 146 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 202
Query: 314 APEYVMTGHLTSKSDVYSFGVVLLEMLT 341
A E + T T+KSDV+SFGV+L E++T
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 18/208 (8%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLLH 198
++G G FGCV+ G + +N G + AVK+LN G ++L E + + H
Sbjct: 38 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 199 PNLVKLVGYCIEDDQR-LLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG--AAKGLA 255
PN++ L+G C+ + L+V +M G L N + + P +++ I G AKG+
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMK 148
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA--PEDGKTHVSTRVMGTYGYA 313
FL A K ++RD N +LD + K++DFGLA+D E H T +
Sbjct: 149 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWM 205
Query: 314 APEYVMTGHLTSKSDVYSFGVVLLEMLT 341
A E + T T+KSDV+SFGV+L E++T
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 18/208 (8%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLLH 198
++G G FGCV+ G + +N G + AVK+LN G ++L E + + H
Sbjct: 37 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 199 PNLVKLVGYCIEDD-QRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG--AAKGLA 255
PN++ L+G C+ + L+V +M G L N + + P +++ I G AKG+
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMK 147
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA--PEDGKTHVSTRVMGTYGYA 313
FL A K ++RD N +LD + K++DFGLA+D E H T +
Sbjct: 148 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 204
Query: 314 APEYVMTGHLTSKSDVYSFGVVLLEMLT 341
A E + T T+KSDV+SFGV+L E++T
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 18/208 (8%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLLH 198
++G G FGCV+ G + +N G + AVK+LN G ++L E + + H
Sbjct: 96 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 149
Query: 199 PNLVKLVGYCIEDD-QRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG--AAKGLA 255
PN++ L+G C+ + L+V +M G L N + + P +++ I G AKG+
Sbjct: 150 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMK 206
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA--PEDGKTHVSTRVMGTYGYA 313
FL A K ++RD N +LD + K++DFGLA+D E H T +
Sbjct: 207 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 263
Query: 314 APEYVMTGHLTSKSDVYSFGVVLLEMLT 341
A E + T T+KSDV+SFGV+L E++T
Sbjct: 264 ALESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 18/208 (8%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLLH 198
++G G FGCV+ G + +N G + AVK+LN G ++L E + + H
Sbjct: 37 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 199 PNLVKLVGYCIEDD-QRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG--AAKGLA 255
PN++ L+G C+ + L+V +M G L N + + P +++ I G AKG+
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMK 147
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA--PEDGKTHVSTRVMGTYGYA 313
FL A K ++RD N +LD + K++DFGLA+D E H T +
Sbjct: 148 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 204
Query: 314 APEYVMTGHLTSKSDVYSFGVVLLEMLT 341
A E + T T+KSDV+SFGV+L E++T
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 18/208 (8%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLLH 198
++G G FGCV+ G + +N G + AVK+LN G ++L E + + H
Sbjct: 36 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 199 PNLVKLVGYCIEDD-QRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG--AAKGLA 255
PN++ L+G C+ + L+V +M G L N + + P +++ I G AKG+
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMK 146
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA--PEDGKTHVSTRVMGTYGYA 313
+L A K ++RD N +LD + K++DFGLA+D E H T +
Sbjct: 147 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWM 203
Query: 314 APEYVMTGHLTSKSDVYSFGVVLLEMLT 341
A E + T T+KSDV+SFGV+L E++T
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 102/206 (49%), Gaps = 17/206 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGNLLHP 199
LGEG FG V P GTG VAVK L D G Q W E++ L L H
Sbjct: 22 LGEGHFG-----KVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 200 NLVKLVGYCIEDDQR--LLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFL 257
+++K G C + ++ LV E++P GSL ++L R + + + A +G+A+L
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYL 133
Query: 258 HEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT--YGYAAP 315
H + I+R+ N+LLD D K+ DFGLAK PE G + R G + AP
Sbjct: 134 HSQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPE-GHEYYRVREDGDSPVFWYAP 189
Query: 316 EYVMTGHLTSKSDVYSFGVVLLEMLT 341
E + SDV+SFGV L E+LT
Sbjct: 190 ECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 102/206 (49%), Gaps = 17/206 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGNLLHP 199
LGEG FG V P GTG VAVK L D G Q W E++ L L H
Sbjct: 22 LGEGHFG-----KVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 200 NLVKLVGYCIEDDQR--LLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFL 257
+++K G C + ++ LV E++P GSL ++L R + + + A +G+A+L
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYL 133
Query: 258 HEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT--YGYAAP 315
H + I+R+ N+LLD D K+ DFGLAK PE G + R G + AP
Sbjct: 134 HAQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPE-GHEYYRVREDGDSPVFWYAP 189
Query: 316 EYVMTGHLTSKSDVYSFGVVLLEMLT 341
E + SDV+SFGV L E+LT
Sbjct: 190 ECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 18/208 (8%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLLH 198
++G G FGCV+ G + +N G + AVK+LN G ++L E + + H
Sbjct: 36 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 199 PNLVKLVGYCIEDD-QRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG--AAKGLA 255
PN++ L+G C+ + L+V +M G L N + + P +++ I G AKG+
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMK 146
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA--PEDGKTHVSTRVMGTYGYA 313
+L A K ++RD N +LD + K++DFGLA+D E H T +
Sbjct: 147 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 203
Query: 314 APEYVMTGHLTSKSDVYSFGVVLLEMLT 341
A E + T T+KSDV+SFGV+L E++T
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 18/208 (8%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLLH 198
++G G FGCV+ G + +N G + AVK+LN G ++L E + + H
Sbjct: 37 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 199 PNLVKLVGYCIEDD-QRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG--AAKGLA 255
PN++ L+G C+ + L+V +M G L N + + P +++ I G AKG+
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMK 147
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA--PEDGKTHVSTRVMGTYGYA 313
+L A K ++RD N +LD + K++DFGLA+D E H T +
Sbjct: 148 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 204
Query: 314 APEYVMTGHLTSKSDVYSFGVVLLEMLT 341
A E + T T+KSDV+SFGV+L E++T
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 18/208 (8%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLLH 198
++G G FGCV+ G + +N G + AVK+LN G ++L E + + H
Sbjct: 29 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 82
Query: 199 PNLVKLVGYCIEDD-QRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG--AAKGLA 255
PN++ L+G C+ + L+V +M G L N + + P +++ I G AKG+
Sbjct: 83 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMK 139
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA--PEDGKTHVSTRVMGTYGYA 313
+L A K ++RD N +LD + K++DFGLA+D E H T +
Sbjct: 140 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 196
Query: 314 APEYVMTGHLTSKSDVYSFGVVLLEMLT 341
A E + T T+KSDV+SFGV+L E++T
Sbjct: 197 ALESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 18/208 (8%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLLH 198
++G G FGCV+ G + +N G + AVK+LN G ++L E + + H
Sbjct: 55 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 108
Query: 199 PNLVKLVGYCIEDD-QRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG--AAKGLA 255
PN++ L+G C+ + L+V +M G L N + + P +++ I G AKG+
Sbjct: 109 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMK 165
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA--PEDGKTHVSTRVMGTYGYA 313
+L A K ++RD N +LD + K++DFGLA+D E H T +
Sbjct: 166 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 222
Query: 314 APEYVMTGHLTSKSDVYSFGVVLLEMLT 341
A E + T T+KSDV+SFGV+L E++T
Sbjct: 223 ALESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 12/204 (5%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG+G FG V E P++ TG VAVK L H + +++ E+ L +L H N
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 201 LVKLVGYCIEDDQR--LLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLH 258
+VK G C +R L+ EF+P GSL +L +K + ++ KG+ +L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYL-QKHKERIDHIKLLQYTSQICKGMEYL- 133
Query: 259 EEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGK-THVSTRVMGTYGYAAPEY 317
K I+RD T NIL++ + K+ DFGL K P+D + V + APE
Sbjct: 134 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 318 VMTGHLTSKSDVYSFGVVLLEMLT 341
+ + SDV+SFGVVL E+ T
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 18/208 (8%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLLH 198
++G G FGCV+ G + +N G + AVK+LN G ++L E + + H
Sbjct: 37 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 199 PNLVKLVGYCIEDD-QRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG--AAKGLA 255
PN++ L+G C+ + L+V +M G L N + + P +++ I G AKG+
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMK 147
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA--PEDGKTHVSTRVMGTYGYA 313
+L A K ++RD N +LD + K++DFGLA+D E H T +
Sbjct: 148 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 204
Query: 314 APEYVMTGHLTSKSDVYSFGVVLLEMLT 341
A E + T T+KSDV+SFGV+L E++T
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 18/208 (8%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLLH 198
++G G FGCV+ G + +N G + AVK+LN G ++L E + + H
Sbjct: 56 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 109
Query: 199 PNLVKLVGYCIEDD-QRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG--AAKGLA 255
PN++ L+G C+ + L+V +M G L N + + P +++ I G AKG+
Sbjct: 110 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMK 166
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA--PEDGKTHVSTRVMGTYGYA 313
+L A K ++RD N +LD + K++DFGLA+D E H T +
Sbjct: 167 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 223
Query: 314 APEYVMTGHLTSKSDVYSFGVVLLEMLT 341
A E + T T+KSDV+SFGV+L E++T
Sbjct: 224 ALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 18/208 (8%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLLH 198
++G G FGCV+ G + +N G + AVK+LN G ++L E + + H
Sbjct: 35 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 199 PNLVKLVGYCIEDD-QRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG--AAKGLA 255
PN++ L+G C+ + L+V +M G L N + + P +++ I G AKG+
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMK 145
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA--PEDGKTHVSTRVMGTYGYA 313
+L A K ++RD N +LD + K++DFGLA+D E H T +
Sbjct: 146 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 202
Query: 314 APEYVMTGHLTSKSDVYSFGVVLLEMLT 341
A E + T T+KSDV+SFGV+L E++T
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 18/208 (8%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLLH 198
++G G FGCV+ G + +N G + AVK+LN G ++L E + + H
Sbjct: 34 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 87
Query: 199 PNLVKLVGYCIEDD-QRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG--AAKGLA 255
PN++ L+G C+ + L+V +M G L N + + P +++ I G AKG+
Sbjct: 88 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMK 144
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA--PEDGKTHVSTRVMGTYGYA 313
+L A K ++RD N +LD + K++DFGLA+D E H T +
Sbjct: 145 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 201
Query: 314 APEYVMTGHLTSKSDVYSFGVVLLEMLT 341
A E + T T+KSDV+SFGV+L E++T
Sbjct: 202 ALESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 18/208 (8%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLLH 198
++G G FGCV+ G + +N G + AVK+LN G ++L E + + H
Sbjct: 32 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 85
Query: 199 PNLVKLVGYCIEDD-QRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG--AAKGLA 255
PN++ L+G C+ + L+V +M G L N + + P +++ I G AKG+
Sbjct: 86 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMK 142
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA--PEDGKTHVSTRVMGTYGYA 313
+L A K ++RD N +LD + K++DFGLA+D E H T +
Sbjct: 143 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 199
Query: 314 APEYVMTGHLTSKSDVYSFGVVLLEMLT 341
A E + T T+KSDV+SFGV+L E++T
Sbjct: 200 ALESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 132/281 (46%), Gaps = 34/281 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V++G V LTVAVKTL D ++ +E+L E + + HPN
Sbjct: 19 LGGGQFGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 126
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT-HVSTRVMGTYGYAAPEYVM 319
+K I+RD N L+ ++ K++DFGL++ D T H + + APE +
Sbjct: 127 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPESLA 183
Query: 320 TGHLTSKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPR 378
+ KSDV++FGV+L E+ T G P+ + L+E + YR+ P
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE----------KDYRMERP- 232
Query: 379 LEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
EG +K +L C +P RP +E+ + + +
Sbjct: 233 -EG-----CPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 106/216 (49%), Gaps = 12/216 (5%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 188
+ R+ + LG+G FG V E P++ TG VAVK L H + +++
Sbjct: 5 QFEERHLKFLQQLGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 59
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQR--LLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
E+ L +L H N+VK G C +R L+ E++P GSL ++L +K + ++
Sbjct: 60 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQY 118
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGK-THVSTR 305
KG+ +L K I+RD T NIL++ + K+ DFGL K P+D + V
Sbjct: 119 TSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 175
Query: 306 VMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ APE + + SDV+SFGVVL E+ T
Sbjct: 176 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 106/216 (49%), Gaps = 12/216 (5%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 188
+ R+ + LG+G FG V E P++ TG VAVK L H + +++
Sbjct: 9 QFEERHLKFLQQLGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 63
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQR--LLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
E+ L +L H N+VK G C +R L+ E++P GSL ++L +K + ++
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQY 122
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGK-THVSTR 305
KG+ +L K I+RD T NIL++ + K+ DFGL K P+D + V
Sbjct: 123 TSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 179
Query: 306 VMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ APE + + SDV+SFGVVL E+ T
Sbjct: 180 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 107/219 (48%), Gaps = 12/219 (5%)
Query: 126 NDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE 185
N + R+ + LG+G FG V E P++ TG VAVK L H + ++
Sbjct: 21 NMTQFEERHLKFLQQLGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 75
Query: 186 WLAEVNFLGNLLHPNLVKLVGYCIEDDQR--LLVYEFMPRGSLENHLFRKGSLPLPWSIR 243
+ E+ L +L H N+VK G C +R L+ E++P GSL ++L +K +
Sbjct: 76 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKL 134
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGK-THV 302
++ KG+ +L K I+RD T NIL++ + K+ DFGL K P+D + V
Sbjct: 135 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 191
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ APE + + SDV+SFGVVL E+ T
Sbjct: 192 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 106/216 (49%), Gaps = 12/216 (5%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 188
+ R+ + LG+G FG V E P++ TG VAVK L H + +++
Sbjct: 11 QFEERHLKFLQQLGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 65
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQR--LLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
E+ L +L H N+VK G C +R L+ E++P GSL ++L +K + ++
Sbjct: 66 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQY 124
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGK-THVSTR 305
KG+ +L K I+RD T NIL++ + K+ DFGL K P+D + V
Sbjct: 125 TSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 181
Query: 306 VMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ APE + + SDV+SFGVVL E+ T
Sbjct: 182 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 106/216 (49%), Gaps = 12/216 (5%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 188
+ R+ + LG+G FG V E P++ TG VAVK L H + +++
Sbjct: 6 QFEERHLKFLQQLGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 60
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQR--LLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
E+ L +L H N+VK G C +R L+ E++P GSL ++L +K + ++
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQY 119
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGK-THVSTR 305
KG+ +L K I+RD T NIL++ + K+ DFGL K P+D + V
Sbjct: 120 TSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 176
Query: 306 VMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ APE + + SDV+SFGVVL E+ T
Sbjct: 177 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 107/219 (48%), Gaps = 12/219 (5%)
Query: 126 NDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE 185
N + R+ + LG+G FG V E P++ TG VAVK L H + ++
Sbjct: 21 NMTQFEERHLKFLQQLGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 75
Query: 186 WLAEVNFLGNLLHPNLVKLVGYCIEDDQR--LLVYEFMPRGSLENHLFRKGSLPLPWSIR 243
+ E+ L +L H N+VK G C +R L+ E++P GSL ++L +K +
Sbjct: 76 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKL 134
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGK-THV 302
++ KG+ +L K I+RD T NIL++ + K+ DFGL K P+D + V
Sbjct: 135 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 191
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ APE + + SDV+SFGVVL E+ T
Sbjct: 192 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 106/216 (49%), Gaps = 12/216 (5%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 188
+ R+ + LG+G FG V E P++ TG VAVK L H + +++
Sbjct: 6 QFEERHLKFLQQLGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 60
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQR--LLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
E+ L +L H N+VK G C +R L+ E++P GSL ++L +K + ++
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQY 119
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGK-THVSTR 305
KG+ +L K I+RD T NIL++ + K+ DFGL K P+D + V
Sbjct: 120 TSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 176
Query: 306 VMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ APE + + SDV+SFGVVL E+ T
Sbjct: 177 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 107/217 (49%), Gaps = 14/217 (6%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 188
+ R+ + LG+G FG V E P++ TG VAVK L H + +++
Sbjct: 6 QFEERHLKFLQQLGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 60
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQR--LLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
E+ L +L H N+VK G C +R L+ E++P GSL ++L +K + ++
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQY 119
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
KG+ +L K I+RD T NIL++ + K+ DFGL K P+D K +
Sbjct: 120 TSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD-KEFFKVKE 175
Query: 307 MGT--YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
G + APE + + SDV+SFGVVL E+ T
Sbjct: 176 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 106/216 (49%), Gaps = 12/216 (5%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 188
+ R+ + LG+G FG V E P++ TG VAVK L H + +++
Sbjct: 13 QFEERHLKFLQQLGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 67
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQR--LLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
E+ L +L H N+VK G C +R L+ E++P GSL ++L +K + ++
Sbjct: 68 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQY 126
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGK-THVSTR 305
KG+ +L K I+RD T NIL++ + K+ DFGL K P+D + V
Sbjct: 127 TSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 183
Query: 306 VMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ APE + + SDV+SFGVVL E+ T
Sbjct: 184 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 106/216 (49%), Gaps = 12/216 (5%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 188
+ R+ + LG+G FG V E P++ TG VAVK L H + +++
Sbjct: 4 QFEERHLKFLQQLGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 58
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQR--LLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
E+ L +L H N+VK G C +R L+ E++P GSL ++L +K + ++
Sbjct: 59 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQY 117
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGK-THVSTR 305
KG+ +L K I+RD T NIL++ + K+ DFGL K P+D + V
Sbjct: 118 TSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 174
Query: 306 VMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ APE + + SDV+SFGVVL E+ T
Sbjct: 175 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 106/216 (49%), Gaps = 12/216 (5%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 188
+ R+ + LG+G FG V E P++ TG VAVK L H + +++
Sbjct: 10 QFEERHLKFLQQLGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 64
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQR--LLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
E+ L +L H N+VK G C +R L+ E++P GSL ++L +K + ++
Sbjct: 65 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQY 123
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGK-THVSTR 305
KG+ +L K I+RD T NIL++ + K+ DFGL K P+D + V
Sbjct: 124 TSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 180
Query: 306 VMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ APE + + SDV+SFGVVL E+ T
Sbjct: 181 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 106/216 (49%), Gaps = 12/216 (5%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 188
+ R+ + LG+G FG V E P++ TG VAVK L H + +++
Sbjct: 12 QFEERHLKFLQQLGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 66
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQR--LLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
E+ L +L H N+VK G C +R L+ E++P GSL ++L +K + ++
Sbjct: 67 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQY 125
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGK-THVSTR 305
KG+ +L K I+RD T NIL++ + K+ DFGL K P+D + V
Sbjct: 126 TSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 182
Query: 306 VMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ APE + + SDV+SFGVVL E+ T
Sbjct: 183 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 106/216 (49%), Gaps = 12/216 (5%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 188
+ R+ + LG+G FG V E P++ TG VAVK L H + +++
Sbjct: 37 QFEERHLKFLQQLGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 91
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQR--LLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
E+ L +L H N+VK G C +R L+ E++P GSL ++L +K + ++
Sbjct: 92 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQY 150
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGK-THVSTR 305
KG+ +L K I+RD T NIL++ + K+ DFGL K P+D + V
Sbjct: 151 TSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 207
Query: 306 VMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ APE + + SDV+SFGVVL E+ T
Sbjct: 208 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGNLLHP 199
LGEG FG V P GTG VAVK L D G Q W E++ L L H
Sbjct: 39 LGEGHFG-----KVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHE 93
Query: 200 NLVKLVGYCIEDD---QRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAF 256
+++K G C ED LV E++P GSL ++L R + + + A +G+A+
Sbjct: 94 HIIKYKG-CCEDAGAASLQLVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAY 149
Query: 257 LHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT--YGYAA 314
LH + I+RD N+LLD D K+ DFGLAK PE G R G + A
Sbjct: 150 LHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE-GHEXYRVREDGDSPVFWYA 205
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLT 341
PE + SDV+SFGV L E+LT
Sbjct: 206 PECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 34/288 (11%)
Query: 138 ESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGNL 196
E ++G G FG V +G ++ AP K + VA+KTL + + E+L+E + +G
Sbjct: 21 EEVIGAGEFGEVCRGRLK----APGKKES--CVAIKTLKGGYTERQRREFLSEASIMGQF 74
Query: 197 LHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL-FRKGSLPLPWSIRMKIALGAAKGLA 255
HPN+++L G +++ EFM G+L++ L G + + M G A G+
Sbjct: 75 EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGM--LRGIASGMR 132
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG---TYGY 312
+L AE ++RD NIL++++ K+SDFGL++ E+ T +G +
Sbjct: 133 YL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRW 189
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGDKRRF 371
APE + TS SD +S+G+V+ E+++ G R N +E +
Sbjct: 190 TAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIE----------QD 239
Query: 372 YRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
YRL P QL C +D ARPR +VV L +
Sbjct: 240 YRLPPPP-------DCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 132/281 (46%), Gaps = 34/281 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G +G V++G V LTVAVKTL D ++ +E+L E + + HPN
Sbjct: 19 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 69 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 126
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT-HVSTRVMGTYGYAAPEYVM 319
+K I+RD N L+ ++ K++DFGL++ D T H + + APE +
Sbjct: 127 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPESLA 183
Query: 320 TGHLTSKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPR 378
+ KSDV++FGV+L E+ T G P+ + L+E + YR+ P
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE----------KDYRMERP- 232
Query: 379 LEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
EG +K +L C +P RP +E+ + + +
Sbjct: 233 -EG-----CPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 34/288 (11%)
Query: 138 ESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGNL 196
E ++G G FG V +G ++ AP K + VA+KTL + + E+L+E + +G
Sbjct: 19 EEVIGAGEFGEVCRGRLK----APGKKES--CVAIKTLKGGYTERQRREFLSEASIMGQF 72
Query: 197 LHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL-FRKGSLPLPWSIRMKIALGAAKGLA 255
HPN+++L G +++ EFM G+L++ L G + + M G A G+
Sbjct: 73 EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGM--LRGIASGMR 130
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG---TYGY 312
+L AE ++RD NIL++++ K+SDFGL++ E+ T +G +
Sbjct: 131 YL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRW 187
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGDKRRF 371
APE + TS SD +S+G+V+ E+++ G R N +E +
Sbjct: 188 TAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIE----------QD 237
Query: 372 YRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
YRL P QL C +D ARPR +VV L +
Sbjct: 238 YRLPPPP-------DCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 108/217 (49%), Gaps = 14/217 (6%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 188
+ R+ + LG+G FG V E P++ TG VAVK L H + +++
Sbjct: 7 QFEERHLKFLQQLGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 61
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQR--LLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
E+ L +L H N+VK G C +R L+ E++P GSL ++L +K + ++
Sbjct: 62 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQY 120
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
KG+ +L K I+R+ T NIL++ + K+ DFGL K P+D K + +
Sbjct: 121 TSQICKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQD-KEYYKVKE 176
Query: 307 MGT--YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
G + APE + + SDV+SFGVVL E+ T
Sbjct: 177 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 128/281 (45%), Gaps = 34/281 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G +G V++G V LTVAVKTL D ++ +E+L E + + HPN
Sbjct: 22 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 71
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 72 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 129
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT-HVSTRVMGTYGYAAPEYVM 319
+K I+RD N L+ ++ K++DFGL++ D T H + + APE +
Sbjct: 130 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPESLA 186
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG-DKRRFYRLLDPR 378
+ KSDV++FGV+L E+ T S P+ G D + Y LL+
Sbjct: 187 YNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELLEKD 229
Query: 379 LEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
+K +L C +P RP +E+ + + +
Sbjct: 230 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 128/281 (45%), Gaps = 34/281 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G +G V++G V LTVAVKTL D ++ +E+L E + + HPN
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT-HVSTRVMGTYGYAAPEYVM 319
+K I+RD N L+ ++ K++DFGL++ D T H + + APE +
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 185
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG-DKRRFYRLLDPR 378
+ KSDV++FGV+L E+ T S P+ G D + Y LL+
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELLEKD 228
Query: 379 LEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
+K +L C +P RP +E+ + + +
Sbjct: 229 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 128/281 (45%), Gaps = 34/281 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G +G V++G V LTVAVKTL D ++ +E+L E + + HPN
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT-HVSTRVMGTYGYAAPEYVM 319
+K I+RD N L+ ++ K++DFGL++ D T H + + APE +
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 185
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG-DKRRFYRLLDPR 378
+ KSDV++FGV+L E+ T S P+ G D + Y LL+
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELLEKD 228
Query: 379 LEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
+K +L C +P RP +E+ + + +
Sbjct: 229 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 128/281 (45%), Gaps = 34/281 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G +G V++G V LTVAVKTL D ++ +E+L E + + HPN
Sbjct: 26 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 133
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT-HVSTRVMGTYGYAAPEYVM 319
+K I+RD N L+ ++ K++DFGL++ D T H + + APE +
Sbjct: 134 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 190
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG-DKRRFYRLLDPR 378
+ KSDV++FGV+L E+ T S P+ G D + Y LL+
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELLEKD 233
Query: 379 LEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
+K +L C +P RP +E+ + + +
Sbjct: 234 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 128/281 (45%), Gaps = 34/281 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G +G V++G V LTVAVKTL D ++ +E+L E + + HPN
Sbjct: 26 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 133
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT-HVSTRVMGTYGYAAPEYVM 319
+K I+RD N L+ ++ K++DFGL++ D T H + + APE +
Sbjct: 134 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 190
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG-DKRRFYRLLDPR 378
+ KSDV++FGV+L E+ T S P+ G D + Y LL+
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELLEKD 233
Query: 379 LEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
+K +L C +P RP +E+ + + +
Sbjct: 234 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 128/281 (45%), Gaps = 34/281 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G +G V++G V LTVAVKTL D ++ +E+L E + + HPN
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT-HVSTRVMGTYGYAAPEYVM 319
+K I+RD N L+ ++ K++DFGL++ D T H + + APE +
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 185
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG-DKRRFYRLLDPR 378
+ KSDV++FGV+L E+ T S P+ G D + Y LL+
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELLEKD 228
Query: 379 LEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
+K +L C +P RP +E+ + + +
Sbjct: 229 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 128/281 (45%), Gaps = 34/281 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G +G V++G V LTVAVKTL D ++ +E+L E + + HPN
Sbjct: 26 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 133
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT-HVSTRVMGTYGYAAPEYVM 319
+K I+RD N L+ ++ K++DFGL++ D T H + + APE +
Sbjct: 134 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPESLA 190
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG-DKRRFYRLLDPR 378
+ KSDV++FGV+L E+ T S P+ G D + Y LL+
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELLEKD 233
Query: 379 LEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
+K +L C +P RP +E+ + + +
Sbjct: 234 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 128/281 (45%), Gaps = 34/281 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G +G V++G V LTVAVKTL D ++ +E+L E + + HPN
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT-HVSTRVMGTYGYAAPEYVM 319
+K I+RD N L+ ++ K++DFGL++ D T H + + APE +
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 185
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG-DKRRFYRLLDPR 378
+ KSDV++FGV+L E+ T S P+ G D + Y LL+
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELLEKD 228
Query: 379 LEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
+K +L C +P RP +E+ + + +
Sbjct: 229 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGNLLHP 199
LGEG FG VE P TG VAVK+L + H L E+ L NL H
Sbjct: 29 LGEGHFG-----KVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 83
Query: 200 NLVKLVGYCIED--DQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFL 257
N+VK G C ED + L+ EF+P GSL+ +L K + ++K A+ KG+ +L
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYL 142
Query: 258 HEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGK--THVSTRVMGTYGYAAP 315
+ ++RD N+L+++++ K+ DFGL K D + T R + Y AP
Sbjct: 143 ---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-AP 198
Query: 316 EYVMTGHLTSKSDVYSFGVVLLEMLT 341
E +M SDV+SFGV L E+LT
Sbjct: 199 ECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 106/216 (49%), Gaps = 12/216 (5%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 188
+ R+ + LG+G FG V E P++ TG VAVK L H + +++
Sbjct: 9 QFEERHLKFLQQLGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 63
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQR--LLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
E+ L +L H N+VK G C +R L+ E++P GSL ++L + + + ++
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QAHAERIDHIKLLQY 122
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGK-THVSTR 305
KG+ +L K I+RD T NIL++ + K+ DFGL K P+D + V
Sbjct: 123 TSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP 179
Query: 306 VMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ APE + + SDV+SFGVVL E+ T
Sbjct: 180 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 128/281 (45%), Gaps = 34/281 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G +G V++G V LTVAVKTL D ++ +E+L E + + HPN
Sbjct: 26 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 133
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT-HVSTRVMGTYGYAAPEYVM 319
+K I+RD N L+ ++ K++DFGL++ D T H + + APE +
Sbjct: 134 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 190
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG-DKRRFYRLLDPR 378
+ KSDV++FGV+L E+ T S P+ G D + Y LL+
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELLEKD 233
Query: 379 LEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
+K +L C +P RP +E+ + + +
Sbjct: 234 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGNLLHP 199
LGEG FG VE P TG VAVK+L + H L E+ L NL H
Sbjct: 17 LGEGHFG-----KVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 71
Query: 200 NLVKLVGYCIED--DQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFL 257
N+VK G C ED + L+ EF+P GSL+ +L K + ++K A+ KG+ +L
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYL 130
Query: 258 HEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGK--THVSTRVMGTYGYAAP 315
+ ++RD N+L+++++ K+ DFGL K D + T R + Y AP
Sbjct: 131 ---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-AP 186
Query: 316 EYVMTGHLTSKSDVYSFGVVLLEMLT 341
E +M SDV+SFGV L E+LT
Sbjct: 187 ECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 116/231 (50%), Gaps = 30/231 (12%)
Query: 118 SQLRKFMFNDLKLATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLN 176
+QLR +LK +LG G FG V+KG WV E T + VA+K LN
Sbjct: 30 AQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKI------PVAIKILN 76
Query: 177 HD-GLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-- 233
G + + E++ E + ++ HP+LV+L+G C+ +L V + MP G L ++
Sbjct: 77 ETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKD 135
Query: 234 ---GSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGL 290
L L W +++ AKG+ +L E + +++RD N+L+ + + K++DFGL
Sbjct: 136 NIGSQLLLNWCVQI------AKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGL 186
Query: 291 AKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
A+ D K + + + A E + T +SDV+S+GV + E++T
Sbjct: 187 ARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 128/281 (45%), Gaps = 34/281 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G +G V++G V LTVAVKTL D ++ +E+L E + + HPN
Sbjct: 23 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 130
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT-HVSTRVMGTYGYAAPEYVM 319
+K I+RD N L+ ++ K++DFGL++ D T H + + APE +
Sbjct: 131 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 187
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG-DKRRFYRLLDPR 378
+ KSDV++FGV+L E+ T S P+ G D + Y LL+
Sbjct: 188 YNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELLEKD 230
Query: 379 LEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
+K +L C +P RP +E+ + + +
Sbjct: 231 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 128/281 (45%), Gaps = 34/281 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G +G V++G V LTVAVKTL D ++ +E+L E + + HPN
Sbjct: 25 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 74
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 75 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 132
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT-HVSTRVMGTYGYAAPEYVM 319
+K I+RD N L+ ++ K++DFGL++ D T H + + APE +
Sbjct: 133 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 189
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG-DKRRFYRLLDPR 378
+ KSDV++FGV+L E+ T S P+ G D + Y LL+
Sbjct: 190 YNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELLEKD 232
Query: 379 LEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
+K +L C +P RP +E+ + + +
Sbjct: 233 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 273
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 128/281 (45%), Gaps = 34/281 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G +G V++G V LTVAVKTL D ++ +E+L E + + HPN
Sbjct: 26 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 133
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT-HVSTRVMGTYGYAAPEYVM 319
+K I+RD N L+ ++ K++DFGL++ D T H + + APE +
Sbjct: 134 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 190
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG-DKRRFYRLLDPR 378
+ KSDV++FGV+L E+ T S P+ G D + Y LL+
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELLEKD 233
Query: 379 LEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
+K +L C +P RP +E+ + + +
Sbjct: 234 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 136/303 (44%), Gaps = 42/303 (13%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G +G V++G V LTVAVKTL D ++ +E+L E + + HPN
Sbjct: 267 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 316
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 317 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 374
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT-HVSTRVMGTYGYAAPEYVM 319
+K I+R+ N L+ ++ K++DFGL++ D T H + + APE +
Sbjct: 375 -KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 431
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG-DKRRFYRLLDPR 378
+ KSDV++FGV+L E+ T S P+ G D + Y LL+
Sbjct: 432 YNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELLEKD 474
Query: 379 LEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL--------QNLKDMASSSY 430
+K +L C +P RP +E+ + + + + K++ +
Sbjct: 475 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKELGKENL 534
Query: 431 YFQ 433
YFQ
Sbjct: 535 YFQ 537
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 132/281 (46%), Gaps = 34/281 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G +G V++G V LTVAVKTL D ++ +E+L E + + HPN
Sbjct: 19 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 126
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT-HVSTRVMGTYGYAAPEYVM 319
+K I+RD N L+ ++ K++DFGL++ D T H + + APE +
Sbjct: 127 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKF--PIKWTAPESLA 183
Query: 320 TGHLTSKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPR 378
+ KSDV++FGV+L E+ T G P+ + L+E + YR+ P
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE----------KDYRMERP- 232
Query: 379 LEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
EG +K +L C +P RP +E+ + + +
Sbjct: 233 -EG-----CPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 128/281 (45%), Gaps = 34/281 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G +G V++G V LTVAVKTL D ++ +E+L E + + HPN
Sbjct: 23 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 130
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT-HVSTRVMGTYGYAAPEYVM 319
+K I+RD N L+ ++ K++DFGL++ D T H + + APE +
Sbjct: 131 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 187
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG-DKRRFYRLLDPR 378
+ KSDV++FGV+L E+ T S P+ G D + Y LL+
Sbjct: 188 YNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELLEKD 230
Query: 379 LEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
+K +L C +P RP +E+ + + +
Sbjct: 231 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 128/281 (45%), Gaps = 34/281 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G +G V++G V LTVAVKTL D ++ +E+L E + + HPN
Sbjct: 34 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 83
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 84 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 141
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT-HVSTRVMGTYGYAAPEYVM 319
+K I+RD N L+ ++ K++DFGL++ D T H + + APE +
Sbjct: 142 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 198
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG-DKRRFYRLLDPR 378
+ KSDV++FGV+L E+ T S P+ G D + Y LL+
Sbjct: 199 YNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELLEKD 241
Query: 379 LEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
+K +L C +P RP +E+ + + +
Sbjct: 242 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 282
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 128/281 (45%), Gaps = 34/281 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G +G V++G V LTVAVKTL D ++ +E+L E + + HPN
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 128
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT-HVSTRVMGTYGYAAPEYVM 319
+K I+RD N L+ ++ K++DFGL++ D T H + + APE +
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 185
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG-DKRRFYRLLDPR 378
+ KSDV++FGV+L E+ T S P+ G D + Y LL+
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELLEKD 228
Query: 379 LEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
+K +L C +P RP +E+ + + +
Sbjct: 229 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 23/209 (11%)
Query: 140 LLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGNLL 197
+LG G FG V+KG WV E T + VA+K LN G + + E++ E + ++
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKI------PVAIKILNETTGPKANVEFMDEALIMASMD 75
Query: 198 HPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----GSLPLPWSIRMKIALGAAK 252
HP+LV+L+G C+ +L V + MP G L ++ L L W +++ AK
Sbjct: 76 HPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AK 128
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ +L E + +++RD N+L+ + + K++DFGLA+ D K + + +
Sbjct: 129 GMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKW 185
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
A E + T +SDV+S+GV + E++T
Sbjct: 186 MALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 128/281 (45%), Gaps = 34/281 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G +G V++G V LTVAVKTL D ++ +E+L E + + HPN
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 128
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT-HVSTRVMGTYGYAAPEYVM 319
+K I+RD N L+ ++ K++DFGL++ D T H + + APE +
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 185
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG-DKRRFYRLLDPR 378
+ KSDV++FGV+L E+ T S P+ G D + Y LL+
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELLEKD 228
Query: 379 LEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
+K +L C +P RP +E+ + + +
Sbjct: 229 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 128/281 (45%), Gaps = 34/281 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G +G V++G V LTVAVKTL D ++ +E+L E + + HPN
Sbjct: 228 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 277
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 278 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 335
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT-HVSTRVMGTYGYAAPEYVM 319
+K I+R+ N L+ ++ K++DFGL++ D T H + + APE +
Sbjct: 336 -KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 392
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG-DKRRFYRLLDPR 378
+ KSDV++FGV+L E+ T S P+ G D + Y LL+
Sbjct: 393 YNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELLEKD 435
Query: 379 LEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
+K +L C +P RP +E+ + + +
Sbjct: 436 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 128/281 (45%), Gaps = 34/281 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G +G V++G V LTVAVKTL D ++ +E+L E + + HPN
Sbjct: 225 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 274
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 275 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 332
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT-HVSTRVMGTYGYAAPEYVM 319
+K I+R+ N L+ ++ K++DFGL++ D T H + + APE +
Sbjct: 333 -KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 389
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG-DKRRFYRLLDPR 378
+ KSDV++FGV+L E+ T S P+ G D + Y LL+
Sbjct: 390 YNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELLEKD 432
Query: 379 LEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
+K +L C +P RP +E+ + + +
Sbjct: 433 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 473
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 122/267 (45%), Gaps = 32/267 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 27 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 75
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L + + ++ E+M GSL + L + L + + +A A+G+AF+ E
Sbjct: 76 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 133
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMT 320
+ I+RD + +NIL+ + K++DFGLA+ ED + + APE +
Sbjct: 134 --RNYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINY 190
Query: 321 GHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPRLE 380
G T KSDV+SFG++L E++T R N E + + R YR++ P
Sbjct: 191 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPD-- 239
Query: 381 GHFSIKGSQKATQLAAQCLSRDPKARP 407
++ QL C P+ RP
Sbjct: 240 -----NCPEELYQLMRLCWKERPEDRP 261
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 122/267 (45%), Gaps = 32/267 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 29 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 77
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L + + ++ E+M GSL + L + L + + +A A+G+AF+ E
Sbjct: 78 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 135
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMT 320
+ I+RD + +NIL+ + K++DFGLA+ ED + + APE +
Sbjct: 136 --RNYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINY 192
Query: 321 GHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPRLE 380
G T KSDV+SFG++L E++T R N E + + R YR++ P
Sbjct: 193 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPD-- 241
Query: 381 GHFSIKGSQKATQLAAQCLSRDPKARP 407
++ QL C P+ RP
Sbjct: 242 -----NCPEELYQLMRLCWKERPEDRP 263
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGNLLHP 199
LGEG FG V P GTG VAVK L G Q W E+ L L H
Sbjct: 16 LGEGHFG-----KVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 70
Query: 200 NLVKLVGYCIEDDQR--LLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFL 257
++VK G C + ++ LV E++P GSL ++L R + + + A +G+A+L
Sbjct: 71 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC---VGLAQLLLFAQQICEGMAYL 127
Query: 258 HEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT--YGYAAP 315
H + I+R N+LLD D K+ DFGLAK PE G + R G + AP
Sbjct: 128 HAQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPE-GHEYYRVREDGDSPVFWYAP 183
Query: 316 EYVMTGHLTSKSDVYSFGVVLLEMLT 341
E + SDV+SFGV L E+LT
Sbjct: 184 ECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 122/267 (45%), Gaps = 32/267 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 30 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 78
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L + + ++ E+M GSL + L + L + + +A A+G+AF+ E
Sbjct: 79 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 136
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMT 320
+ I+RD + +NIL+ + K++DFGLA+ ED + + APE +
Sbjct: 137 --RNYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINY 193
Query: 321 GHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPRLE 380
G T KSDV+SFG++L E++T R N E + + R YR++ P
Sbjct: 194 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPD-- 242
Query: 381 GHFSIKGSQKATQLAAQCLSRDPKARP 407
++ QL C P+ RP
Sbjct: 243 -----NCPEELYQLMRLCWKERPEDRP 264
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGNLLHP 199
LGEG FG V P GTG VAVK L G Q W E+ L L H
Sbjct: 17 LGEGHFG-----KVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 71
Query: 200 NLVKLVGYCIEDDQR--LLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFL 257
++VK G C + ++ LV E++P GSL ++L R + + + A +G+A+L
Sbjct: 72 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC---VGLAQLLLFAQQICEGMAYL 128
Query: 258 HEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT--YGYAAP 315
H + I+R N+LLD D K+ DFGLAK PE G + R G + AP
Sbjct: 129 HAQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPE-GHEYYRVREDGDSPVFWYAP 184
Query: 316 EYVMTGHLTSKSDVYSFGVVLLEMLT 341
E + SDV+SFGV L E+LT
Sbjct: 185 ECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 129/288 (44%), Gaps = 36/288 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGNLLHP 199
LG+G FG V++G N +K VAVKT+N L+ E+L E + +
Sbjct: 22 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 77
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLF--------RKGSLPLPWSIRMKIALGAA 251
++V+L+G + L+V E M G L+++L G P +++A A
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 252 KGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYG 311
G+A+L+ K ++RD N ++ D+ K+ DFG+ +D E + +
Sbjct: 138 DGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 194
Query: 312 YAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRF 371
+ APE + G T+ SD++SFGVVL E+ + L E L +++
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVL 239
Query: 372 YRLLDPRLEGHFSIKGS--QKATQLAAQCLSRDPKARPRMSEVVETLK 417
++D G+ + ++ T L C +PK RP E+V LK
Sbjct: 240 KFVMDG---GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 284
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 122/267 (45%), Gaps = 32/267 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 31 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 79
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L + + ++ E+M GSL + L + L + + +A A+G+AF+ E
Sbjct: 80 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 137
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMT 320
+ I+RD + +NIL+ + K++DFGLA+ ED + + APE +
Sbjct: 138 --RNYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINY 194
Query: 321 GHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPRLE 380
G T KSDV+SFG++L E++T R N E + + R YR++ P
Sbjct: 195 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPD-- 243
Query: 381 GHFSIKGSQKATQLAAQCLSRDPKARP 407
++ QL C P+ RP
Sbjct: 244 -----NCPEELYQLMRLCWKERPEDRP 265
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 127/280 (45%), Gaps = 32/280 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G +G V++G V LTVAVKTL D ++ +E+L E + + HPN
Sbjct: 22 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 71
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 72 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 129
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMT 320
+K I+RD N L+ ++ K++DFGL++ D T + + APE +
Sbjct: 130 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-KWTAPESLAY 187
Query: 321 GHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG-DKRRFYRLLDPRL 379
+ KSDV++FGV+L E+ T S P+ G D + Y LL+
Sbjct: 188 NKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELLEKDY 230
Query: 380 EGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
+K +L C +P RP +E+ + + +
Sbjct: 231 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 122/267 (45%), Gaps = 32/267 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 21 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 69
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L + + ++ E+M GSL + L + L + + +A A+G+AF+ E
Sbjct: 70 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 127
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMT 320
+ I+RD + +NIL+ + K++DFGLA+ ED + + APE +
Sbjct: 128 --RNYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINY 184
Query: 321 GHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPRLE 380
G T KSDV+SFG++L E++T R N E + + R YR++ P
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPD-- 233
Query: 381 GHFSIKGSQKATQLAAQCLSRDPKARP 407
++ QL C P+ RP
Sbjct: 234 -----NCPEELYQLMRLCWKERPEDRP 255
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 129/288 (44%), Gaps = 36/288 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGNLLHP 199
LG+G FG V++G N +K VAVKT+N L+ E+L E + +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLF--------RKGSLPLPWSIRMKIALGAA 251
++V+L+G + L+V E M G L+++L G P +++A A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 252 KGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYG 311
G+A+L+ K ++RD N ++ D+ K+ DFG+ +D E + +
Sbjct: 141 DGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 312 YAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRF 371
+ APE + G T+ SD++SFGVVL E+ + L E L +++
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVL 242
Query: 372 YRLLDPRLEGHFSIKGS--QKATQLAAQCLSRDPKARPRMSEVVETLK 417
++D G+ + ++ T L C +PK RP E+V LK
Sbjct: 243 KFVMDG---GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 136/298 (45%), Gaps = 36/298 (12%)
Query: 138 ESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGNL 196
E ++G G FG V G ++ G + VA+KTL + + ++L+E + +G
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREI------FVAIKTLKSGYTEKQRRDFLSEASIMGQF 65
Query: 197 LHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAF 256
HPN++ L G + +++ EFM GSL++ L R+ + + G A G+ +
Sbjct: 66 DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL-RQNDGQFTVIQLVGMLRGIAAGMKY 124
Query: 257 LHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG---TYGYA 313
L A+ ++R NIL++++ K+SDFGL++ +D T +G +
Sbjct: 125 L---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWT 181
Query: 314 APEYVMTGHLTSKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGDKRRFY 372
APE + TS SDV+S+G+V+ E+++ G R N +E + Y
Sbjct: 182 APEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE----------QDY 231
Query: 373 RLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL----QNLKDMA 426
RL P + QL C +D RP+ ++V TL + +LK MA
Sbjct: 232 RLPPP-------MDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNSLKAMA 282
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 122/267 (45%), Gaps = 32/267 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 23 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 71
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L + + ++ E+M GSL + L + L + + +A A+G+AF+ E
Sbjct: 72 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 129
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMT 320
+ I+RD + +NIL+ + K++DFGLA+ ED + + APE +
Sbjct: 130 --RNYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINY 186
Query: 321 GHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPRLE 380
G T KSDV+SFG++L E++T R N E + + R YR++ P
Sbjct: 187 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPD-- 235
Query: 381 GHFSIKGSQKATQLAAQCLSRDPKARP 407
++ QL C P+ RP
Sbjct: 236 -----NCPEELYQLMRLCWKERPEDRP 257
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 122/267 (45%), Gaps = 32/267 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 26 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 74
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L + + ++ E+M GSL + L + L + + +A A+G+AF+ E
Sbjct: 75 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 132
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMT 320
+ I+RD + +NIL+ + K++DFGLA+ ED + + APE +
Sbjct: 133 --RNYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINY 189
Query: 321 GHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPRLE 380
G T KSDV+SFG++L E++T R N E + + R YR++ P
Sbjct: 190 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPD-- 238
Query: 381 GHFSIKGSQKATQLAAQCLSRDPKARP 407
++ QL C P+ RP
Sbjct: 239 -----NCPEELYQLMRLCWKERPEDRP 260
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 122/267 (45%), Gaps = 32/267 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 27 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 75
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L + + ++ E+M GSL + L + L + + +A A+G+AF+ E
Sbjct: 76 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 133
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMT 320
+ I+RD + +NIL+ + K++DFGLA+ ED + + APE +
Sbjct: 134 --RNYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINY 190
Query: 321 GHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPRLE 380
G T KSDV+SFG++L E++T R N E + + R YR++ P
Sbjct: 191 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPD-- 239
Query: 381 GHFSIKGSQKATQLAAQCLSRDPKARP 407
++ QL C P+ RP
Sbjct: 240 -----NCPEELYQLMRLCWKERPEDRP 261
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 127/280 (45%), Gaps = 32/280 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G +G V++G V LTVAVKTL D ++ +E+L E + + HPN
Sbjct: 23 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 130
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMT 320
+K I+RD N L+ ++ K++DFGL++ D T + + APE +
Sbjct: 131 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-KWTAPESLAY 188
Query: 321 GHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG-DKRRFYRLLDPRL 379
+ KSDV++FGV+L E+ T S P+ G D + Y LL+
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELLEKDY 231
Query: 380 EGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
+K +L C +P RP +E+ + + +
Sbjct: 232 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 122/267 (45%), Gaps = 32/267 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 21 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 69
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L + + ++ E+M GSL + L + L + + +A A+G+AF+ E
Sbjct: 70 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 127
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMT 320
+ I+RD + +NIL+ + K++DFGLA+ ED + + APE +
Sbjct: 128 --RNYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINY 184
Query: 321 GHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPRLE 380
G T KSDV+SFG++L E++T R N E + + R YR++ P
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPD-- 233
Query: 381 GHFSIKGSQKATQLAAQCLSRDPKARP 407
++ QL C P+ RP
Sbjct: 234 -----NCPEELYQLMRLCWKERPEDRP 255
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 122/267 (45%), Gaps = 32/267 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 22 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 70
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L + + ++ E+M GSL + L + L + + +A A+G+AF+ E
Sbjct: 71 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 128
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMT 320
+ I+RD + +NIL+ + K++DFGLA+ ED + + APE +
Sbjct: 129 --RNYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINY 185
Query: 321 GHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPRLE 380
G T KSDV+SFG++L E++T R N E + + R YR++ P
Sbjct: 186 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPD-- 234
Query: 381 GHFSIKGSQKATQLAAQCLSRDPKARP 407
++ QL C P+ RP
Sbjct: 235 -----NCPEELYQLMRLCWKERPEDRP 256
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 122/287 (42%), Gaps = 32/287 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGNL-LH 198
LG G FG V VE K L VAVK L KE L +E+ + +L H
Sbjct: 54 LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPL------PWSIR--MKIALGA 250
N+V L+G C L++ E+ G L N L RK L P +R + +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 169
Query: 251 AKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTY 310
A+G+AFL A K I+RD N+LL + AK+ DFGLA+D D V
Sbjct: 170 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 226
Query: 311 GYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRR 370
+ APE + T +SDV+S+G++L E+ S+ N P + +
Sbjct: 227 KWMAPESIFDCVYTVQSDVWSYGILLWEIF----SLGLN-----------PYPGILVNSK 271
Query: 371 FYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLK 417
FY+L+ + + + C + +P RP ++ L+
Sbjct: 272 FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 318
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 122/287 (42%), Gaps = 32/287 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGNL-LH 198
LG G FG V VE K L VAVK L KE L +E+ + +L H
Sbjct: 46 LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 101
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPL------PWSIR--MKIALGA 250
N+V L+G C L++ E+ G L N L RK L P +R + +
Sbjct: 102 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 161
Query: 251 AKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTY 310
A+G+AFL A K I+RD N+LL + AK+ DFGLA+D D V
Sbjct: 162 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 218
Query: 311 GYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRR 370
+ APE + T +SDV+S+G++L E+ S+ N P + +
Sbjct: 219 KWMAPESIFDCVYTVQSDVWSYGILLWEIF----SLGLN-----------PYPGILVNSK 263
Query: 371 FYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLK 417
FY+L+ + + + C + +P RP ++ L+
Sbjct: 264 FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 310
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 137/293 (46%), Gaps = 28/293 (9%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 187
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSKKE--ISVAIKTLKVGYTEKQRRDFL 94
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
E + +G HPN+++L G + ++V E+M GSL++ L RK + +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGML 153
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
G A G+ +L ++ ++RD NIL++++ K+SDFGLA+ +D + +TR
Sbjct: 154 RGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGG 210
Query: 308 GT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
+ +PE + TS SDV+S+G+VL E+++ RP E + + +
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIK 261
Query: 367 DKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
YRL P + QL C +D RP+ ++V L L
Sbjct: 262 AVDEGYRLPPP-------MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 122/267 (45%), Gaps = 32/267 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 21 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 69
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L + + ++ E+M GSL + L + L + + +A A+G+AF+ E
Sbjct: 70 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 127
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMT 320
+ I+RD + +NIL+ + K++DFGLA+ ED + + APE +
Sbjct: 128 --RNYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINY 184
Query: 321 GHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPRLE 380
G T KSDV+SFG++L E++T R N E + + R YR++ P
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPD-- 233
Query: 381 GHFSIKGSQKATQLAAQCLSRDPKARP 407
++ QL C P+ RP
Sbjct: 234 -----NCPEELYQLMRLCWKERPEDRP 255
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 122/267 (45%), Gaps = 32/267 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 16 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 64
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L + + ++ E+M GSL + L + L + + +A A+G+AF+ E
Sbjct: 65 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 122
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMT 320
+ I+RD + +NIL+ + K++DFGLA+ ED + + APE +
Sbjct: 123 --RNYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINY 179
Query: 321 GHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPRLE 380
G T KSDV+SFG++L E++T R N E + + R YR++ P
Sbjct: 180 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPD-- 228
Query: 381 GHFSIKGSQKATQLAAQCLSRDPKARP 407
++ QL C P+ RP
Sbjct: 229 -----NCPEELYQLMRLCWKERPEDRP 250
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 129/288 (44%), Gaps = 36/288 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGNLLHP 199
LG+G FG V++G N +K VAVKT+N L+ E+L E + +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLF--------RKGSLPLPWSIRMKIALGAA 251
++V+L+G + L+V E M G L+++L G P +++A A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 252 KGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYG 311
G+A+L+ K ++RD N ++ D+ K+ DFG+ +D E + +
Sbjct: 141 DGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR 197
Query: 312 YAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRF 371
+ APE + G T+ SD++SFGVVL E+ + L E L +++
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVL 242
Query: 372 YRLLDPRLEGHFSIKGS--QKATQLAAQCLSRDPKARPRMSEVVETLK 417
++D G+ + ++ T L C +PK RP E+V LK
Sbjct: 243 KFVMDG---GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 137/293 (46%), Gaps = 28/293 (9%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 187
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSKKE--ISVAIKTLKVGYTEKQRRDFL 94
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
E + +G HPN+++L G + ++V E+M GSL++ L RK + +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGML 153
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
G A G+ +L ++ ++RD NIL++++ K+SDFGL++ +D + +TR
Sbjct: 154 RGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 308 GT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
+ +PE + TS SDV+S+G+VL E+++ RP E + + +
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIK 261
Query: 367 DKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
YRL P + QL C +D RP+ ++V L L
Sbjct: 262 AVDEGYRLPPP-------MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 137/293 (46%), Gaps = 28/293 (9%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 187
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSKKE--ISVAIKTLKVGYTEKQRRDFL 94
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
E + +G HPN+++L G + ++V E+M GSL++ L RK + +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGML 153
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
G A G+ +L ++ ++RD NIL++++ K+SDFGL++ +D + +TR
Sbjct: 154 RGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 308 GT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
+ +PE + TS SDV+S+G+VL E+++ RP E + + +
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIK 261
Query: 367 DKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
YRL P + QL C +D RP+ ++V L L
Sbjct: 262 AVDEGYRLPPP-------MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 129/288 (44%), Gaps = 36/288 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGNLLHP 199
LG+G FG V++G N +K VAVKT+N L+ E+L E + +
Sbjct: 24 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 79
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLF--------RKGSLPLPWSIRMKIALGAA 251
++V+L+G + L+V E M G L+++L G P +++A A
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 252 KGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYG 311
G+A+L+ K ++RD N ++ D+ K+ DFG+ +D E + +
Sbjct: 140 DGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 312 YAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRF 371
+ APE + G T+ SD++SFGVVL E+ + L E L +++
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVL 241
Query: 372 YRLLDPRLEGHFSIKGS--QKATQLAAQCLSRDPKARPRMSEVVETLK 417
++D G+ + ++ T L C +PK RP E+V LK
Sbjct: 242 KFVMDG---GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 129/288 (44%), Gaps = 36/288 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGNLLHP 199
LG+G FG V++G N +K VAVKT+N L+ E+L E + +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLF--------RKGSLPLPWSIRMKIALGAA 251
++V+L+G + L+V E M G L+++L G P +++A A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 252 KGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYG 311
G+A+L+ K ++RD N ++ D+ K+ DFG+ +D E + +
Sbjct: 141 DGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 312 YAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRF 371
+ APE + G T+ SD++SFGVVL E+ + L E L +++
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVL 242
Query: 372 YRLLDPRLEGHFSIKGS--QKATQLAAQCLSRDPKARPRMSEVVETLK 417
++D G+ + ++ T L C +PK RP E+V LK
Sbjct: 243 KFVMDG---GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 137/293 (46%), Gaps = 28/293 (9%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 187
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSKKE--ISVAIKTLKVGYTEKQRRDFL 94
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
E + +G HPN+++L G + ++V E+M GSL++ L RK + +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGML 153
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
G A G+ +L ++ ++RD NIL++++ K+SDFGL++ +D + +TR
Sbjct: 154 RGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 308 GT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
+ +PE + TS SDV+S+G+VL E+++ RP E + + +
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIK 261
Query: 367 DKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
YRL P + QL C +D RP+ ++V L L
Sbjct: 262 AVDEGYRLPPP-------MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 137/293 (46%), Gaps = 28/293 (9%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 187
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSKKE--ISVAIKTLKVGYTEKQRRDFL 94
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
E + +G HPN+++L G + ++V E+M GSL++ L RK + +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGML 153
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
G A G+ +L ++ ++RD NIL++++ K+SDFGL++ +D + +TR
Sbjct: 154 RGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 308 GT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
+ +PE + TS SDV+S+G+VL E+++ RP E + + +
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIK 261
Query: 367 DKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
YRL P + QL C +D RP+ ++V L L
Sbjct: 262 AVDEGYRLPPP-------MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 137/293 (46%), Gaps = 28/293 (9%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 187
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSKKE--ISVAIKTLKVGYTEKQRRDFL 94
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
E + +G HPN+++L G + ++V E+M GSL++ L RK + +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGML 153
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
G A G+ +L ++ ++RD NIL++++ K+SDFGL++ +D + +TR
Sbjct: 154 RGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 308 GT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
+ +PE + TS SDV+S+G+VL E+++ RP E + + +
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIK 261
Query: 367 DKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
YRL P + QL C +D RP+ ++V L L
Sbjct: 262 AVDEGYRLPPP-------MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 137/293 (46%), Gaps = 28/293 (9%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 187
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSKKE--ISVAIKTLKVGYTEKQRRDFL 65
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
E + +G HPN+++L G + ++V E+M GSL++ L RK + +
Sbjct: 66 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGML 124
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
G A G+ +L ++ ++RD NIL++++ K+SDFGL++ +D + +TR
Sbjct: 125 RGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 181
Query: 308 GT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
+ +PE + TS SDV+S+G+VL E+++ RP E + + +
Sbjct: 182 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIK 232
Query: 367 DKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
YRL P + QL C +D RP+ ++V L L
Sbjct: 233 AVDEGYRLPPP-------MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 137/293 (46%), Gaps = 28/293 (9%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 187
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSKKE--ISVAIKTLKVGYTEKQRRDFL 82
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
E + +G HPN+++L G + ++V E+M GSL++ L RK + +
Sbjct: 83 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGML 141
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
G A G+ +L ++ ++RD NIL++++ K+SDFGL++ +D + +TR
Sbjct: 142 RGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 198
Query: 308 GT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
+ +PE + TS SDV+S+G+VL E+++ RP E + + +
Sbjct: 199 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIK 249
Query: 367 DKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
YRL P + QL C +D RP+ ++V L L
Sbjct: 250 AVDEGYRLPPP-------MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 128/288 (44%), Gaps = 36/288 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGNLLHP 199
LG+G FG V++G N +K VAVKT+N L+ E+L E + +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLF--------RKGSLPLPWSIRMKIALGAA 251
++V+L+G + L+V E M G L+++L G P +++A A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 252 KGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYG 311
G+A+L+ K ++RD N ++ D+ K+ DFG+ +D E + +
Sbjct: 141 DGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 312 YAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRF 371
+ APE + G T+ SD++SFGVVL E+ + L E L +++
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVL 242
Query: 372 YRLLDPRLEGHFSIKGS--QKATQLAAQCLSRDPKARPRMSEVVETLK 417
++D G+ + ++ T L C +P RP E+V LK
Sbjct: 243 KFVMDG---GYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 137/293 (46%), Gaps = 28/293 (9%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 187
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 92
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
E + +G HPN+++L G + ++V E+M GSL++ L RK + +
Sbjct: 93 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGML 151
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
G A G+ +L ++ ++RD NIL++++ K+SDFGL++ +D + +TR
Sbjct: 152 RGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 208
Query: 308 GT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
+ +PE + TS SDV+S+G+VL E+++ RP E + + +
Sbjct: 209 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIK 259
Query: 367 DKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
YRL P + QL C +D RP+ ++V L L
Sbjct: 260 AVDEGYRLPPP-------MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 137/293 (46%), Gaps = 35/293 (11%)
Query: 138 ESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGNL 196
+ ++G G FG V+KG ++ + P VA+KTL + + ++L E +G
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVP-----VAIKTLKAGYTEKQRVDFLGEAGIMGQF 103
Query: 197 LHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL--GAAKGL 254
H N+++L G + +++ E+M G+L+ L K +S+ + + G A G+
Sbjct: 104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDG---EFSVLQLVGMLRGIAAGM 160
Query: 255 AFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAK---DAPEDGKTHVSTRVMGTYG 311
+L A ++RD NIL++++ K+SDFGL++ D PE T ++
Sbjct: 161 KYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI--PIR 215
Query: 312 YAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRF 371
+ APE + TS SDV+SFG+V+ E++T RP E + E + + D
Sbjct: 216 WTAPEAISYRKFTSASDVWSFGIVMWEVMTY-----GERPYWELSNHEVMKA-INDG--- 266
Query: 372 YRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPLQNLKD 424
+RL P + QL QC ++ RP+ +++V L L D
Sbjct: 267 FRLPTP-------MDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 126/279 (45%), Gaps = 42/279 (15%)
Query: 134 NFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 192
+ R E LG+G FG V+ G W NGT VA+KTL G + +L E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFLQEAQV 66
Query: 193 LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGS----LPLPWSIRMKIAL 248
+ L H LV+L + ++ +V E+M +GSL + F KG L LP + M A
Sbjct: 67 MKKLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLD--FLKGEMGKYLRLPQLVDM--AA 121
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
A G+A++ ++RD + +NIL+ + K++DFGLA+ ED +
Sbjct: 122 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEXTARQGAKF 177
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDK 368
+ APE + G T KSDV+SFG++L E+ T R N R L
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQV 228
Query: 369 RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARP 407
R YR+ P + + L QC +DP+ RP
Sbjct: 229 ERGYRMPCPP-------ECPESLHDLMCQCWRKDPEERP 260
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 136/293 (46%), Gaps = 28/293 (9%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 187
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 94
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
E + +G HPN+++L G + ++V E+M GSL++ L RK + +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGML 153
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
G A G+ +L ++ ++RD NIL++++ K+SDFGL + +D + +TR
Sbjct: 154 RGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGG 210
Query: 308 GT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
+ +PE + TS SDV+S+G+VL E+++ RP E + + +
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIK 261
Query: 367 DKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
YRL P + QL C +D RP+ ++V L L
Sbjct: 262 AVDEGYRLPPP-------MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 127/287 (44%), Gaps = 34/287 (11%)
Query: 138 ESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGNL 196
E ++G G G V G + G V VA+K L + + ++L+E + +G
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVP------VAIKALKAGYTERQRRDFLSEASIMGQF 107
Query: 197 LHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL-FRKGSLPLPWSIRMKIALGAAKGLA 255
HPN+++L G ++V E+M GSL+ L G + + M +GA G+
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGA--GMR 165
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAK---DAPEDGKTHVSTRVMGTYGY 312
+L ++ ++RD N+L+D++ K+SDFGL++ D P+ T ++ +
Sbjct: 166 YL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKI--PIRW 220
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFY 372
APE + +S SDV+SFGVV+ E+L N N R + Y
Sbjct: 221 TAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN---------RDVISSVEEGY 271
Query: 373 RLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
RL P + QL C +D RPR S++V L L
Sbjct: 272 RLPAP-------MGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 122/267 (45%), Gaps = 32/267 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 17 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 65
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L + + ++ E+M GSL + L + L + + +A A+G+AF+ E
Sbjct: 66 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 123
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMT 320
+ I+R+ + +NIL+ + K++DFGLA+ ED + + APE +
Sbjct: 124 --RNYIHRNLRAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINY 180
Query: 321 GHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPRLE 380
G T KSDV+SFG++L E++T R N E + + R YR++ P
Sbjct: 181 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPD-- 229
Query: 381 GHFSIKGSQKATQLAAQCLSRDPKARP 407
++ QL C P+ RP
Sbjct: 230 -----NCPEELYQLMRLCWKERPEDRP 251
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 126/279 (45%), Gaps = 42/279 (15%)
Query: 134 NFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 192
+ R E LG+G FG V+ G W NGT VA+KTL G + +L E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFLQEAQV 66
Query: 193 LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGS----LPLPWSIRMKIAL 248
+ L H LV+L + ++ +V E+M +GSL + F KG L LP + M A
Sbjct: 67 MKKLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLD--FLKGEMGKYLRLPQLVDM--AA 121
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
A G+A++ ++RD + +NIL+ + K++DFGLA+ ED +
Sbjct: 122 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKF 177
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDK 368
+ APE + G T KSDV+SFG++L E+ T R N R L
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQV 228
Query: 369 RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARP 407
R YR+ P + + L QC +DP+ RP
Sbjct: 229 ERGYRMPCPP-------ECPESLHDLMCQCWRKDPEERP 260
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 134/301 (44%), Gaps = 38/301 (12%)
Query: 138 ESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGNL 196
E ++G G G V G + G V VA+K L + + ++L+E + +G
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVP------VAIKALKAGYTERQRRDFLSEASIMGQF 107
Query: 197 LHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL-FRKGSLPLPWSIRMKIALGAAKGLA 255
HPN+++L G ++V E+M GSL+ L G + + M +GA G+
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGA--GMR 165
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAK---DAPEDGKTHVSTRVMGTYGY 312
+L ++ ++RD N+L+D++ K+SDFGL++ D P+ T ++ +
Sbjct: 166 YL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKI--PIRW 220
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFY 372
APE + +S SDV+SFGVV+ E+L N N R + Y
Sbjct: 221 TAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN---------RDVISSVEEGY 271
Query: 373 RLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL----QNLKDMASS 428
RL P + QL C +D RPR S++V L L ++L+ A+
Sbjct: 272 RLPAP-------MGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESLRATATV 324
Query: 429 S 429
S
Sbjct: 325 S 325
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 126/279 (45%), Gaps = 42/279 (15%)
Query: 134 NFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 192
+ R E LG+G FG V+ G W NGT VA+KTL G + +L E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFLQEAQV 66
Query: 193 LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGS----LPLPWSIRMKIAL 248
+ L H LV+L + ++ +V E+M +GSL + F KG L LP + M A
Sbjct: 67 MKKLRHEKLVQLYA-VVSEEPIYIVCEYMSKGSLLD--FLKGEMGKYLRLPQLVDM--AA 121
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
A G+A++ ++RD + +NIL+ + K++DFGLA+ ED +
Sbjct: 122 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKF 177
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDK 368
+ APE + G T KSDV+SFG++L E+ T R N R L
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQV 228
Query: 369 RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARP 407
R YR+ P + + L QC +DP+ RP
Sbjct: 229 ERGYRMPCPP-------ECPESLHDLMCQCWRKDPEERP 260
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 126/279 (45%), Gaps = 42/279 (15%)
Query: 134 NFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 192
+ R E LG+G FG V+ G W NGT VA+KTL G + +L E
Sbjct: 8 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFLQEAQV 55
Query: 193 LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGS----LPLPWSIRMKIAL 248
+ L H LV+L + ++ +V E+M +GSL + F KG L LP + M A
Sbjct: 56 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDM--AA 110
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
A G+A++ ++RD + +NIL+ + K++DFGLA+ ED +
Sbjct: 111 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKF 166
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDK 368
+ APE + G T KSDV+SFG++L E+ T R N R L
Sbjct: 167 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQV 217
Query: 369 RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARP 407
R YR+ P + + L QC +DP+ RP
Sbjct: 218 ERGYRMPCPP-------ECPESLHDLMCQCWRKDPEERP 249
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 126/279 (45%), Gaps = 42/279 (15%)
Query: 134 NFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 192
+ R E LG+G FG V+ G W NGT VA+KTL G + +L E
Sbjct: 10 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFLQEAQV 57
Query: 193 LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGS----LPLPWSIRMKIAL 248
+ L H LV+L + ++ +V E+M +GSL + F KG L LP + M A
Sbjct: 58 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDM--AA 112
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
A G+A++ ++RD + +NIL+ + K++DFGLA+ ED +
Sbjct: 113 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKF 168
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDK 368
+ APE + G T KSDV+SFG++L E+ T R N R L
Sbjct: 169 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQV 219
Query: 369 RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARP 407
R YR+ P + + L QC +DP+ RP
Sbjct: 220 ERGYRMPCPP-------ECPESLHDLMCQCWRKDPEERP 251
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 126/279 (45%), Gaps = 42/279 (15%)
Query: 134 NFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 192
+ R E LG+G FG V+ G W NGT VA+KTL G + +L E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFLQEAQV 66
Query: 193 LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGS----LPLPWSIRMKIAL 248
+ L H LV+L + ++ +V E+M +GSL + F KG L LP + M A
Sbjct: 67 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDM--AA 121
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
A G+A++ ++RD + +NIL+ + K++DFGLA+ ED +
Sbjct: 122 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKF 177
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDK 368
+ APE + G T KSDV+SFG++L E+ T R N R L
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQV 228
Query: 369 RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARP 407
R YR+ P + + L QC +DP+ RP
Sbjct: 229 ERGYRMPCPP-------ECPESLHDLMCQCWRKDPEERP 260
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 136/293 (46%), Gaps = 28/293 (9%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 187
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 94
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
E + +G HPN+++L G + ++V E M GSL++ L RK + +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL-RKHDAQFTVIQLVGML 153
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
G A G+ +L ++ ++RD NIL++++ K+SDFGL++ +D + +TR
Sbjct: 154 RGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 308 GT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
+ +PE + TS SDV+S+G+VL E+++ RP E + + +
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIK 261
Query: 367 DKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
YRL P + QL C +D RP+ ++V L L
Sbjct: 262 AVDEGYRLPPP-------MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 121/267 (45%), Gaps = 32/267 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G G V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 21 LGAGQAGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 69
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L + + ++ E+M GSL + L + L + + +A A+G+AF+ E
Sbjct: 70 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 127
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMT 320
+ I+RD + +NIL+ + K++DFGLA+ ED + + APE +
Sbjct: 128 --RNYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDAEXTAREGAKFPIKWTAPEAINY 184
Query: 321 GHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPRLE 380
G T KSDV+SFG++L E++T R N E + + R YR++ P
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPD-- 233
Query: 381 GHFSIKGSQKATQLAAQCLSRDPKARP 407
++ QL C P+ RP
Sbjct: 234 -----NCPEELYQLMRLCWKERPEDRP 255
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 118/297 (39%), Gaps = 44/297 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE----VNFLGNL 196
LG G FG V VE +K +TVAVK L +E L +++LGN
Sbjct: 47 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 101
Query: 197 LHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK----------------GSLPLPW 240
H N+V L+G C L++ E+ G L N L RK L L
Sbjct: 102 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 160
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT 300
+ + AKG+AFL A K I+RD NILL K+ DFGLA+D D
Sbjct: 161 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 217
Query: 301 HVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEW 360
V + APE + T +SDV+S+G+ L E+ + S
Sbjct: 218 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS--------------- 262
Query: 361 ARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLK 417
P + +FY+++ + + C DP RP ++V+ ++
Sbjct: 263 PYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 319
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 136/293 (46%), Gaps = 28/293 (9%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 187
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 94
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
E + +G HPN+++L G + ++V E M GSL++ L RK + +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL-RKHDAQFTVIQLVGML 153
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
G A G+ +L ++ ++RD NIL++++ K+SDFGL++ +D + +TR
Sbjct: 154 RGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 308 GT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
+ +PE + TS SDV+S+G+VL E+++ RP E + + +
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIK 261
Query: 367 DKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
YRL P + QL C +D RP+ ++V L L
Sbjct: 262 AVDEGYRLPPP-------MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 109/234 (46%), Gaps = 35/234 (14%)
Query: 133 RNFRPESL-----LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 187
R FRP L LG+G FG K E TG + +K L + + +L
Sbjct: 5 RIFRPSDLIHGEVLGKGCFGQAIKVTHRE---------TGEVMVMKELIRFDEETQRTFL 55
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
EV + L HPN++K +G +D + + E++ G+L + + PWS R+ A
Sbjct: 56 KEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRG-IIKSMDSQYPWSQRVSFA 114
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLA------KDAPE----- 296
A G+A+LH +I+RD + N L+ + N ++DFGLA K PE
Sbjct: 115 KDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSL 171
Query: 297 ---DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMD 347
D K + V+G + APE + K DV+SFG+VL E++ GR + D
Sbjct: 172 KKPDRKKRYT--VVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNAD 222
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 118/297 (39%), Gaps = 44/297 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE----VNFLGNL 196
LG G FG V VE +K +TVAVK L +E L +++LGN
Sbjct: 49 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 103
Query: 197 LHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK----------------GSLPLPW 240
H N+V L+G C L++ E+ G L N L RK L L
Sbjct: 104 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 162
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT 300
+ + AKG+AFL A K I+RD NILL K+ DFGLA+D D
Sbjct: 163 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 219
Query: 301 HVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEW 360
V + APE + T +SDV+S+G+ L E+ + S
Sbjct: 220 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS--------------- 264
Query: 361 ARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLK 417
P + +FY+++ + + C DP RP ++V+ ++
Sbjct: 265 PYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 321
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 136/293 (46%), Gaps = 28/293 (9%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 187
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSKKE--ISVAIKTLKVGYTEKQRRDFL 65
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
E + +G HPN+++L G + ++V E M GSL++ L RK + +
Sbjct: 66 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL-RKHDAQFTVIQLVGML 124
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
G A G+ +L ++ ++RD NIL++++ K+SDFGL++ +D + +TR
Sbjct: 125 RGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 181
Query: 308 GT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
+ +PE + TS SDV+S+G+VL E+++ RP E + + +
Sbjct: 182 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIK 232
Query: 367 DKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
YRL P + QL C +D RP+ ++V L L
Sbjct: 233 AVDEGYRLPPP-------MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 118/297 (39%), Gaps = 44/297 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE----VNFLGNL 196
LG G FG V VE +K +TVAVK L +E L +++LGN
Sbjct: 31 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 85
Query: 197 LHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK----------------GSLPLPW 240
H N+V L+G C L++ E+ G L N L RK L L
Sbjct: 86 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT 300
+ + AKG+AFL A K I+RD NILL K+ DFGLA+D D
Sbjct: 145 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 201
Query: 301 HVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEW 360
V + APE + T +SDV+S+G+ L E+ + S
Sbjct: 202 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS--------------- 246
Query: 361 ARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLK 417
P + +FY+++ + + C DP RP ++V+ ++
Sbjct: 247 PYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 125/281 (44%), Gaps = 34/281 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G +G V+ G V LTVAVKTL D ++ +E+L E + + HPN
Sbjct: 40 LGGGQYGEVYVG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 89
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L+G C + +V E+MP G+L ++L + + + +A + + +L
Sbjct: 90 LVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE-- 147
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT-HVSTRVMGTYGYAAPEYVM 319
+K I+RD N L+ ++ K++DFGL++ D T H + + APE +
Sbjct: 148 -KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLA 204
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG-DKRRFYRLLDPR 378
+ KSDV++FGV+L E+ T S P+ G D + Y LL+
Sbjct: 205 YNTFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYDLLEKG 247
Query: 379 LEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
K +L C P RP +E + + +
Sbjct: 248 YRMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFETM 288
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 125/284 (44%), Gaps = 38/284 (13%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V G K VAVK + +G E+ E + L HP
Sbjct: 16 LGSGQFGVVKLG----------KWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPK 64
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LVK G C ++ +V E++ G L N+L G P S +++ +G+AFL
Sbjct: 65 LVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEP-SQLLEMCYDVCEGMAFLESH 123
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT---YGYAAPEY 317
I+RD N L+D D K+SDFG+ + +D +VS+ +GT ++APE
Sbjct: 124 Q---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD--QYVSS--VGTKFPVKWSAPEV 176
Query: 318 VMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDP 377
+SKSDV++FG+++ E+ + + N E L + R YR P
Sbjct: 177 FHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL------KVSQGHRLYR---P 227
Query: 378 RLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPLQN 421
L S Q+ C P+ RP +++ +++PL+
Sbjct: 228 HL-------ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 118/297 (39%), Gaps = 44/297 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE----VNFLGNL 196
LG G FG V VE +K +TVAVK L +E L +++LGN
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 108
Query: 197 LHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK----------------GSLPLPW 240
H N+V L+G C L++ E+ G L N L RK L L
Sbjct: 109 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT 300
+ + AKG+AFL A K I+RD NILL K+ DFGLA+D D
Sbjct: 168 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 224
Query: 301 HVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEW 360
V + APE + T +SDV+S+G+ L E+ + S
Sbjct: 225 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS--------------- 269
Query: 361 ARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLK 417
P + +FY+++ + + C DP RP ++V+ ++
Sbjct: 270 PYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 123/293 (41%), Gaps = 41/293 (13%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK---EWLAEV 190
NFR E +G G F V++ +G + VA+K + L K + + E+
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDG---------VPVALKKVQIFDLMDAKARADCIKEI 83
Query: 191 NFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL--FRKGSLPLPWSIRMKIAL 248
+ L L HPN++K IED++ +V E G L + F+K +P K +
Sbjct: 84 DLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFV 143
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
L +H + V++RD K +N+ + A KL D GL + KT + ++G
Sbjct: 144 QLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFF--SSKTTAAHSLVG 198
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDK 368
T Y +PE + KSD++S G +L EM P GDK
Sbjct: 199 TPYYMSPERIHENGYNFKSDIWSLGCLLYEM------------------AALQSPFYGDK 240
Query: 369 RRFYRLLDPRLEGHF----SIKGSQKATQLAAQCLSRDPKARPRMSEVVETLK 417
Y L + + S S++ QL C++ DP+ RP ++ V + K
Sbjct: 241 MNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAK 293
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 126/279 (45%), Gaps = 42/279 (15%)
Query: 134 NFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 192
+ R E LG+G FG V+ G W NGT VA+KTL G + +L E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFLQEAQV 66
Query: 193 LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGS----LPLPWSIRMKIAL 248
+ + H LV+L + ++ +V E+M +GSL + F KG L LP + M A
Sbjct: 67 MKKIRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDM--AA 121
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
A G+A++ ++RD + +NIL+ + K++DFGLA+ ED +
Sbjct: 122 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKF 177
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDK 368
+ APE + G T KSDV+SFG++L E+ T R N R L
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQV 228
Query: 369 RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARP 407
R YR+ P + + L QC +DP+ RP
Sbjct: 229 ERGYRMPCPP-------ECPESLHDLMCQCWRKDPEERP 260
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 104/211 (49%), Gaps = 16/211 (7%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 193
+ + E LG G FG V+ ++ VAVKT+ G + +LAE N +
Sbjct: 189 SLKLEKKLGAGQFGEVWMATYNKH----------TKVAVKTMK-PGSMSVEAFLAEANVM 237
Query: 194 GNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKG 253
L H LVKL + + ++ EFM +GSL + L P + + A+G
Sbjct: 238 KTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 296
Query: 254 LAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYA 313
+AF+ + + I+RD + +NIL+ A K++DFGLA+ ED + +
Sbjct: 297 MAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLAR-VIEDNEYTAREGAKFPIKWT 352
Query: 314 APEYVMTGHLTSKSDVYSFGVVLLEMLTGRR 344
APE + G T KSDV+SFG++L+E++T R
Sbjct: 353 APEAINFGSFTIKSDVWSFGILLMEIVTYGR 383
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 115/233 (49%), Gaps = 29/233 (12%)
Query: 116 VASQLRKFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTL 175
VA+Q +F + L + + +G+G FG V G G VAVK +
Sbjct: 177 VAAQ-DEFYRSGWALNMKELKLLQTIGKGEFGDVMLG-----------DYRGNKVAVKCI 224
Query: 176 NHDGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKG 234
+D + +LAE + + L H NLV+L+G +E+ L +V E+M +GSL ++L +G
Sbjct: 225 KNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG 282
Query: 235 SLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA 294
L +K +L + + +L ++RD N+L+ D AK+SDFGL K+A
Sbjct: 283 RSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 339
Query: 295 P---EDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRR 344
+ GK V + APE + ++KSDV+SFG++L E+ + R
Sbjct: 340 SSTQDTGKLPVK--------WTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 384
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 121/293 (41%), Gaps = 38/293 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGNL-LH 198
LG G FG V VE K L VAVK L KE L +E+ + +L H
Sbjct: 54 LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIR--------------M 244
N+V L+G C L++ E+ G L N L RK L +S +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
+ A+G+AFL A K I+RD N+LL + AK+ DFGLA+D D V
Sbjct: 170 HFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 226
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPH 364
+ APE + T +SDV+S+G++L E+ S+ N P
Sbjct: 227 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF----SLGLN-----------PYPG 271
Query: 365 LGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLK 417
+ +FY+L+ + + + C + +P RP ++ L+
Sbjct: 272 ILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 324
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 125/279 (44%), Gaps = 42/279 (15%)
Query: 134 NFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 192
+ R E LG+G FG V+ G W NGT VA+KTL G + +L E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFLQEAQV 66
Query: 193 LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGS----LPLPWSIRMKIAL 248
+ L H LV+L + ++ +V E+M +GSL + F KG L LP + M A
Sbjct: 67 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDM--AA 121
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
A G+A++ ++RD +NIL+ + K++DFGLA+ ED +
Sbjct: 122 QIASGMAYVER---MNYVHRDLAAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKF 177
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDK 368
+ APE + G T KSDV+SFG++L E+ T R N R L
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQV 228
Query: 369 RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARP 407
R YR+ P + + L QC +DP+ RP
Sbjct: 229 ERGYRMPCPP-------ECPESLHDLMCQCWRKDPEERP 260
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 117/278 (42%), Gaps = 29/278 (10%)
Query: 131 ATRN-FRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE 189
T+N FR +LG+GGFG V V G K K+ L +
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 190 VNFLGNLLHPNLVKLVGYCIE-DDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL 248
VN V + Y E D LV M G L+ H++ G P + + A
Sbjct: 241 VN-------SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
GL LH E ++YRD K NILLD + ++SD GLA PE G+T + RV G
Sbjct: 294 EICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPE-GQT-IKGRV-G 347
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDK 368
T GY APE V T D ++ G +L EM+ G+ + + + VE
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE--------- 398
Query: 369 RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKAR 406
RL+ E +S + S +A L +Q L +DP R
Sbjct: 399 ----RLVKEVPE-EYSERFSPQARSLCSQLLCKDPAER 431
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 104/211 (49%), Gaps = 16/211 (7%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 193
+ + E LG G FG V+ ++ VAVKT+ G + +LAE N +
Sbjct: 16 SLKLEKKLGAGQFGEVWMATYNKHTK----------VAVKTMK-PGSMSVEAFLAEANVM 64
Query: 194 GNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKG 253
L H LVKL + + ++ EFM +GSL + L P + + A+G
Sbjct: 65 KTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 123
Query: 254 LAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYA 313
+AF+ + + I+RD + +NIL+ A K++DFGLA+ ED + +
Sbjct: 124 MAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLAR-VIEDNEYTAREGAKFPIKWT 179
Query: 314 APEYVMTGHLTSKSDVYSFGVVLLEMLTGRR 344
APE + G T KSDV+SFG++L+E++T R
Sbjct: 180 APEAINFGSFTIKSDVWSFGILLMEIVTYGR 210
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 138/291 (47%), Gaps = 34/291 (11%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGNLLH 198
+LGEG FG V++G V N G + VAVKT D +KE +++E + NL H
Sbjct: 31 ILGEGFFGEVYEG-VYTN-----HKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH 84
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFR-KGSLPLPWSIRMKIALGAAKGLAFL 257
P++VKL+G IE++ ++ E P G L ++L R K SL + + +L K +A+L
Sbjct: 85 PHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKV--LTLVLYSLQICKAMAYL 141
Query: 258 HEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEY 317
++RD NIL+ + KL DFGL++ ED + ++ + +PE
Sbjct: 142 E---SINCVHRDIAVRNILVASPECVKLGDFGLSRYI-EDEDYYKASVTRLPIKWMSPES 197
Query: 318 VMTGHLTSKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLD 376
+ T+ SDV+ F V + E+L+ G++ ++E GD+ L
Sbjct: 198 INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE-----KGDRLPKPDLCP 252
Query: 377 PRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPLQNL-KDMA 426
P L L +C DP RPR +E+V +L + + KD+A
Sbjct: 253 PVL------------YTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIA 291
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 125/279 (44%), Gaps = 42/279 (15%)
Query: 134 NFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 192
+ R E LG+G FG V+ G W NGT VA+KTL G + +L E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFLQEAQV 66
Query: 193 LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGS----LPLPWSIRMKIAL 248
+ L H LV+L + ++ +V E+M +G L + F KG L LP + M A
Sbjct: 67 MKKLRHEKLVQLYA-VVSEEPIYIVMEYMSKGCLLD--FLKGEMGKYLRLPQLVDM--AA 121
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
A G+A++ ++RD + +NIL+ + K++DFGLA+ ED +
Sbjct: 122 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKF 177
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDK 368
+ APE + G T KSDV+SFG++L E+ T R N R L
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQV 228
Query: 369 RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARP 407
R YR+ P + + L QC +DP+ RP
Sbjct: 229 ERGYRMPCPP-------ECPESLHDLMCQCWRKDPEERP 260
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 114/230 (49%), Gaps = 29/230 (12%)
Query: 116 VASQLRKFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTL 175
VA+Q +F + L + + +G+G FG V G N VAVK +
Sbjct: 5 VAAQ-DEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGN-----------KVAVKCI 52
Query: 176 NHDGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKG 234
+D + +LAE + + L H NLV+L+G +E+ L +V E+M +GSL ++L +G
Sbjct: 53 KNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG 110
Query: 235 SLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA 294
L +K +L + + +L ++RD N+L+ D AK+SDFGL K+A
Sbjct: 111 RSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 167
Query: 295 P---EDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ GK V + APE + ++KSDV+SFG++L E+ +
Sbjct: 168 SSTQDTGKLPVK--------WTAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 138/291 (47%), Gaps = 34/291 (11%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGNLLH 198
+LGEG FG V++G V N G + VAVKT D +KE +++E + NL H
Sbjct: 15 ILGEGFFGEVYEG-VYTN-----HKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH 68
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFR-KGSLPLPWSIRMKIALGAAKGLAFL 257
P++VKL+G IE++ ++ E P G L ++L R K SL + + +L K +A+L
Sbjct: 69 PHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKV--LTLVLYSLQICKAMAYL 125
Query: 258 HEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEY 317
++RD NIL+ + KL DFGL++ ED + ++ + +PE
Sbjct: 126 E---SINCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPES 181
Query: 318 VMTGHLTSKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLD 376
+ T+ SDV+ F V + E+L+ G++ ++E GD+ L
Sbjct: 182 INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE-----KGDRLPKPDLCP 236
Query: 377 PRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPLQNL-KDMA 426
P L L +C DP RPR +E+V +L + + KD+A
Sbjct: 237 PVL------------YTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIA 275
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 126/279 (45%), Gaps = 42/279 (15%)
Query: 134 NFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 192
+ R E LG+G FG V+ G W NGT VA+KTL G + +L E
Sbjct: 9 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFLQEAQV 56
Query: 193 LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGS----LPLPWSIRMKIAL 248
+ L H LV+L + ++ +V E+M +GSL + F KG L LP + M A
Sbjct: 57 MKKLRHEKLVQLYA-VVSEEPIXIVTEYMSKGSLLD--FLKGETGKYLRLPQLVDM--AA 111
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
A G+A++ ++RD + +NIL+ + K++DFGLA+ ED +
Sbjct: 112 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEXTARQGAKF 167
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDK 368
+ APE + G T KSDV+SFG++L E+ T R N R L
Sbjct: 168 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQV 218
Query: 369 RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARP 407
R YR+ P + + L QC ++P+ RP
Sbjct: 219 ERGYRMPCPP-------ECPESLHDLMCQCWRKEPEERP 250
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 117/278 (42%), Gaps = 29/278 (10%)
Query: 131 ATRN-FRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE 189
T+N FR +LG+GGFG V V G K K+ L +
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 190 VNFLGNLLHPNLVKLVGYCIE-DDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL 248
VN V + Y E D LV M G L+ H++ G P + + A
Sbjct: 241 VN-------SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
GL LH E ++YRD K NILLD + ++SD GLA PE G+T + RV G
Sbjct: 294 EICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPE-GQT-IKGRV-G 347
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDK 368
T GY APE V T D ++ G +L EM+ G+ + + + VE
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE--------- 398
Query: 369 RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKAR 406
RL+ E +S + S +A L +Q L +DP R
Sbjct: 399 ----RLVKEVPE-EYSERFSPQARSLCSQLLCKDPAER 431
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 125/279 (44%), Gaps = 42/279 (15%)
Query: 134 NFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 192
+ R E LG+G FG V+ G W NGT VA+KTL G + +L E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFLQEAQV 66
Query: 193 LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGS----LPLPWSIRMKIAL 248
+ L H LV+L + ++ +V E+M +G L + F KG L LP + M A
Sbjct: 67 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGCLLD--FLKGEMGKYLRLPQLVDM--AA 121
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
A G+A++ ++RD + +NIL+ + K++DFGLA+ ED +
Sbjct: 122 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKF 177
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDK 368
+ APE + G T KSDV+SFG++L E+ T R N R L
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQV 228
Query: 369 RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARP 407
R YR+ P + + L QC +DP+ RP
Sbjct: 229 ERGYRMPCPP-------ECPESLHDLMCQCWRKDPEERP 260
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 138/291 (47%), Gaps = 34/291 (11%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGNLLH 198
+LGEG FG V++G V N G + VAVKT D +KE +++E + NL H
Sbjct: 19 ILGEGFFGEVYEG-VYTN-----HKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH 72
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFR-KGSLPLPWSIRMKIALGAAKGLAFL 257
P++VKL+G IE++ ++ E P G L ++L R K SL + + +L K +A+L
Sbjct: 73 PHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKV--LTLVLYSLQICKAMAYL 129
Query: 258 HEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEY 317
++RD NIL+ + KL DFGL++ ED + ++ + +PE
Sbjct: 130 E---SINCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPES 185
Query: 318 VMTGHLTSKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLD 376
+ T+ SDV+ F V + E+L+ G++ ++E GD+ L
Sbjct: 186 INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE-----KGDRLPKPDLCP 240
Query: 377 PRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPLQNL-KDMA 426
P L L +C DP RPR +E+V +L + + KD+A
Sbjct: 241 PVL------------YTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIA 279
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 126/279 (45%), Gaps = 42/279 (15%)
Query: 134 NFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 192
+ R E LG+G FG V+ G W NGT VA+KTL G + +L E
Sbjct: 12 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFLQEAQV 59
Query: 193 LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGS----LPLPWSIRMKIAL 248
+ L H LV+L + ++ +V E+M +GSL + F KG L LP + M A
Sbjct: 60 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGETGKYLRLPQLVDM--AA 114
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
A G+A++ ++RD + +NIL+ + K++DFGLA+ ED +
Sbjct: 115 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKF 170
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDK 368
+ APE + G T KSDV+SFG++L E+ T R N R L
Sbjct: 171 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQV 221
Query: 369 RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARP 407
R YR+ P + + L QC ++P+ RP
Sbjct: 222 ERGYRMPCPP-------ECPESLHDLMCQCWRKEPEERP 253
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 108/219 (49%), Gaps = 28/219 (12%)
Query: 130 LATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE 189
L + + +G+G FG V G N VAVK + +D + +LAE
Sbjct: 9 LNMKELKLLQTIGKGEFGDVMLGDYRGN-----------KVAVKCIKNDATA--QAFLAE 55
Query: 190 VNFLGNLLHPNLVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL 248
+ + L H NLV+L+G +E+ L +V E+M +GSL ++L +G L +K +L
Sbjct: 56 ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL 115
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAP---EDGKTHVSTR 305
+ + +L ++RD N+L+ D AK+SDFGL K+A + GK V
Sbjct: 116 DVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK-- 170
Query: 306 VMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRR 344
+ APE + ++KSDV+SFG++L E+ + R
Sbjct: 171 ------WTAPEALREAAFSTKSDVWSFGILLWEIYSFGR 203
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LGEG FG VF E + P + + VAVK L +++ E L L H +
Sbjct: 20 LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 75
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSL-------------PLPWSIRMKIA 247
+V+ G C E L+V+E+M G L L G PL + +A
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 135
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
A G+ +L A ++RD T N L+ K+ DFG+++D V R M
Sbjct: 136 SQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 192
Query: 308 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ PE ++ T++SDV+SFGVVL E+ T
Sbjct: 193 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 126/279 (45%), Gaps = 42/279 (15%)
Query: 134 NFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 192
+ R E LG+G FG V+ G W NGT VA+KTL G + +L E
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFLQEAQV 232
Query: 193 LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGS----LPLPWSIRMKIAL 248
+ L H LV+L + ++ +V E+M +GSL + F KG L LP + M A
Sbjct: 233 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGETGKYLRLPQLVDM--AA 287
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
A G+A++ ++RD + +NIL+ + K++DFGLA+ ED +
Sbjct: 288 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKF 343
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDK 368
+ APE + G T KSDV+SFG++L E+ T R N R L
Sbjct: 344 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQV 394
Query: 369 RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARP 407
R YR+ P + + L QC ++P+ RP
Sbjct: 395 ERGYRMPCPP-------ECPESLHDLMCQCWRKEPEERP 426
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 126/279 (45%), Gaps = 42/279 (15%)
Query: 134 NFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 192
+ R E LG+G FG V+ G W NGT VA+KTL G + +L E
Sbjct: 268 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFLQEAQV 315
Query: 193 LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGS----LPLPWSIRMKIAL 248
+ L H LV+L + ++ +V E+M +GSL + F KG L LP + M A
Sbjct: 316 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGETGKYLRLPQLVDM--AA 370
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
A G+A++ ++RD + +NIL+ + K++DFGLA+ ED +
Sbjct: 371 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKF 426
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDK 368
+ APE + G T KSDV+SFG++L E+ T R N R L
Sbjct: 427 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQV 477
Query: 369 RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARP 407
R YR+ P + + L QC ++P+ RP
Sbjct: 478 ERGYRMPCPP-------ECPESLHDLMCQCWRKEPEERP 509
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 126/279 (45%), Gaps = 42/279 (15%)
Query: 134 NFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 192
+ R E LG+G FG V+ G W NGT VA+KTL G + +L E
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFLQEAQV 232
Query: 193 LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGS----LPLPWSIRMKIAL 248
+ L H LV+L + ++ +V E+M +GSL + F KG L LP + M A
Sbjct: 233 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGETGKYLRLPQLVDM--AA 287
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
A G+A++ ++RD + +NIL+ + K++DFGLA+ ED +
Sbjct: 288 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKF 343
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDK 368
+ APE + G T KSDV+SFG++L E+ T R N R L
Sbjct: 344 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQV 394
Query: 369 RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARP 407
R YR+ P + + L QC ++P+ RP
Sbjct: 395 ERGYRMPCPP-------ECPESLHDLMCQCWRKEPEERP 426
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LGEG FG VF E + P + + VAVK L +++ E L L H +
Sbjct: 26 LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 81
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSL-------------PLPWSIRMKIA 247
+V+ G C E L+V+E+M G L L G PL + +A
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 141
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
A G+ +L A ++RD T N L+ K+ DFG+++D V R M
Sbjct: 142 SQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 198
Query: 308 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ PE ++ T++SDV+SFGVVL E+ T
Sbjct: 199 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LGEG FG VF E + P + + VAVK L +++ E L L H +
Sbjct: 49 LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 104
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSL-------------PLPWSIRMKIA 247
+V+ G C E L+V+E+M G L L G PL + +A
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
A G+ +L A ++RD T N L+ K+ DFG+++D V R M
Sbjct: 165 SQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 221
Query: 308 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ PE ++ T++SDV+SFGVVL E+ T
Sbjct: 222 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 108/219 (49%), Gaps = 28/219 (12%)
Query: 130 LATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE 189
L + + +G+G FG V G G VAVK + +D + +LAE
Sbjct: 3 LNMKELKLLQTIGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAE 49
Query: 190 VNFLGNLLHPNLVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL 248
+ + L H NLV+L+G +E+ L +V E+M +GSL ++L +G L +K +L
Sbjct: 50 ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL 109
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAP---EDGKTHVSTR 305
+ + +L ++RD N+L+ D AK+SDFGL K+A + GK V
Sbjct: 110 DVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK-- 164
Query: 306 VMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRR 344
+ APE + ++KSDV+SFG++L E+ + R
Sbjct: 165 ------WTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 197
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 126/279 (45%), Gaps = 42/279 (15%)
Query: 134 NFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 192
+ R E LG+G FG V+ G W NGT VA+KTL G + +L E
Sbjct: 16 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFLQEAQV 63
Query: 193 LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGS----LPLPWSIRMKIAL 248
+ L H LV+L + ++ +V E+M +GSL + F KG L LP + M +
Sbjct: 64 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLD--FLKGETGKYLRLPQLVDMSAQI 120
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
A G+A++ ++RD + +NIL+ + K++DFGLA+ ED +
Sbjct: 121 --ASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKF 174
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDK 368
+ APE + G T KSDV+SFG++L E+ T R N R L
Sbjct: 175 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQV 225
Query: 369 RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARP 407
R YR+ P + + L QC ++P+ RP
Sbjct: 226 ERGYRMPCPP-------ECPESLHDLMCQCWRKEPEERP 257
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 126/279 (45%), Gaps = 42/279 (15%)
Query: 134 NFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 192
+ R E LG+G FG V+ G W NGT VA+KTL G + +L E
Sbjct: 16 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFLQEAQV 63
Query: 193 LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGS----LPLPWSIRMKIAL 248
+ L H LV+L + ++ +V E+M +GSL + F KG L LP + M +
Sbjct: 64 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLD--FLKGETGKYLRLPQLVDMSAQI 120
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
A G+A++ ++RD + +NIL+ + K++DFGLA+ ED +
Sbjct: 121 --ASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEWTARQGAKF 174
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDK 368
+ APE + G T KSDV+SFG++L E+ T R N R L
Sbjct: 175 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQV 225
Query: 369 RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARP 407
R YR+ P + + L QC ++P+ RP
Sbjct: 226 ERGYRMPCPP-------ECPESLHDLMCQCWRKEPEERP 257
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 131/285 (45%), Gaps = 30/285 (10%)
Query: 138 ESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGNL 196
E ++G G FG V G ++ G L VA+KTL + + ++L E + +G
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRE------LPVAIKTLKVGYTEKQRRDFLGEASIMGQF 80
Query: 197 LHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-GSLPLPWSIRMKIALGAAKGLA 255
HPN++ L G + ++V E+M GSL+ L + G + + M G + G+
Sbjct: 81 DHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGM--LRGISAGMK 138
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT-YGYAA 314
+L ++ ++RD NIL++++ K+SDFGL++ +D + +TR + A
Sbjct: 139 YL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTA 195
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRL 374
PE + TS SDV+S+G+V+ E+++ RP E + + YRL
Sbjct: 196 PEAIAFRKFTSASDVWSYGIVMWEVVSY-----GERPYWEMT----NQDVIKAVEEGYRL 246
Query: 375 LDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
P + QL C ++ +RP+ E+V L L
Sbjct: 247 PSP-------MDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 113/230 (49%), Gaps = 21/230 (9%)
Query: 123 FMFNDLKLATRNF---------RPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVK 173
F F D A R F + E ++G G FG V G ++ G + VA+K
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREI------CVAIK 63
Query: 174 TLNHDGL-QGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFR 232
TL + +++L+E + +G HPN++ L G + +++ E+M GSL+ L R
Sbjct: 64 TLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL-R 122
Query: 233 KGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAK 292
K + + G G+ +L ++ ++RD NIL++++ K+SDFG+++
Sbjct: 123 KNDGRFTVIQLVGMLRGIGSGMKYL---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSR 179
Query: 293 DAPEDGKTHVSTRVMGT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+D + +TR + APE + TS SDV+S+G+V+ E+++
Sbjct: 180 VLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 36/288 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGNLLHP 199
LG+G FG V++G N +K VAVKT+N L+ E+L E + +
Sbjct: 26 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 81
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLF--------RKGSLPLPWSIRMKIALGAA 251
++V+L+G + L+V E M G L+++L G P +++A A
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 252 KGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYG 311
G+A+L+ K ++R+ N ++ D+ K+ DFG+ +D E + +
Sbjct: 142 DGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 312 YAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRF 371
+ APE + G T+ SD++SFGVVL E+ + L E L +++
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVL 243
Query: 372 YRLLDPRLEGHFSIKGS--QKATQLAAQCLSRDPKARPRMSEVVETLK 417
++D G+ + ++ T L C +P RP E+V LK
Sbjct: 244 KFVMDG---GYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 36/288 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGNLLHP 199
LG+G FG V++G N +K VAVKT+N L+ E+L E + +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLF--------RKGSLPLPWSIRMKIALGAA 251
++V+L+G + L+V E M G L+++L G P +++A A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 252 KGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYG 311
G+A+L+ K ++R+ N ++ D+ K+ DFG+ +D E + +
Sbjct: 141 DGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 312 YAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRF 371
+ APE + G T+ SD++SFGVVL E+ + L E L +++
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVL 242
Query: 372 YRLLDPRLEGHFSIKGS--QKATQLAAQCLSRDPKARPRMSEVVETLK 417
++D G+ + ++ T L C +P RP E+V LK
Sbjct: 243 KFVMDG---GYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 126/279 (45%), Gaps = 42/279 (15%)
Query: 134 NFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 192
+ R E LG+G FG V+ G W NGT VA+KTL G + +L E
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFLQEAQV 232
Query: 193 LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGS----LPLPWSIRMKIAL 248
+ L H LV+L + ++ +V E+M +GSL + F KG L LP + M A
Sbjct: 233 MKKLRHEKLVQLYA-VVSEEPIYIVGEYMSKGSLLD--FLKGETGKYLRLPQLVDM--AA 287
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
A G+A++ ++RD + +NIL+ + K++DFGLA+ ED +
Sbjct: 288 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKF 343
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDK 368
+ APE + G T KSDV+SFG++L E+ T R N R L
Sbjct: 344 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQV 394
Query: 369 RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARP 407
R YR+ P + + L QC ++P+ RP
Sbjct: 395 ERGYRMPCPP-------ECPESLHDLMCQCWRKEPEERP 426
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V+ G+ N T VAVKTL G + +L E N + L H
Sbjct: 21 LGAGQFGEVWMGYYN-NST---------KVAVKTLKP-GTMSVQAFLEEANLMKTLQHDK 69
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK--GSLPLPWSIRMKIALGAAKGLAFLH 258
LV+L ++ ++ E+M +GSL + L G + LP I + A+G+A++
Sbjct: 70 LVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQI--AEGMAYIE 127
Query: 259 EEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYV 318
K I+RD + +N+L+ K++DFGLA+ ED + + APE +
Sbjct: 128 R---KNYIHRDLRAANVLVSESLMCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAI 183
Query: 319 MTGHLTSKSDVYSFGVVLLEMLT 341
G T KSDV+SFG++L E++T
Sbjct: 184 NFGCFTIKSDVWSFGILLYEIVT 206
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 128/289 (44%), Gaps = 44/289 (15%)
Query: 141 LGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDG-----LQGHKEWLAEVNFLG 194
+G G FG V+KG W + VAVK LN LQ K EV L
Sbjct: 32 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKN---EVGVLR 75
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGL 254
H N++ +GY + Q +V ++ SL +HL + IA A+G+
Sbjct: 76 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGM 133
Query: 255 AFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
+LH K +I+RD K++NI L D K+ DFGLA + +H ++ G+ + A
Sbjct: 134 DYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 190
Query: 315 PEYVM---TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWA-RPHLGDKRR 370
PE + + + +SDVY+FG+VL E++TG+ + + N ++E R L
Sbjct: 191 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIEMVGRGSLSPDLS 248
Query: 371 FYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
R P+ + +L A+CL + RP ++ ++ L
Sbjct: 249 KVRSNCPK-----------RMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 131/289 (45%), Gaps = 38/289 (13%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGNLLHP 199
LG+G FG V++G + G +P T VA+KT+N ++ E+L E + +
Sbjct: 18 LGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 73
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHL------FRKGSLPLPWSIRMKIALGA--A 251
++V+L+G + L++ E M RG L+++L + P S+ I + A
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 133
Query: 252 KGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYG 311
G+A+L+ ++RD N ++ D+ K+ DFG+ +D E + +
Sbjct: 134 DGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 190
Query: 312 YAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRF 371
+ +PE + G T+ SDV+SFGVVL E+ T L E +P+ G
Sbjct: 191 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAE--QPYQGLSNE- 232
Query: 372 YRLLDPRLEGHFSIKGSQ---KATQLAAQCLSRDPKARPRMSEVVETLK 417
++L +EG K +L C +PK RP E++ ++K
Sbjct: 233 -QVLRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIK 280
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 120/291 (41%), Gaps = 36/291 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGNL-LH 198
LG G FG V VE K L VAVK L KE L +E+ + +L H
Sbjct: 54 LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSL------------PLPWSIRMKI 246
N+V L+G C L++ E+ G L N L RK + L +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHF 169
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
+ A+G+AFL A K I+RD N+LL + AK+ DFGLA+D D V
Sbjct: 170 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
+ APE + T +SDV+S+G++L E+ S+ N P +
Sbjct: 227 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF----SLGLN-----------PYPGIL 271
Query: 367 DKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLK 417
+FY+L+ + + + C + +P RP ++ L+
Sbjct: 272 VNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 125/279 (44%), Gaps = 42/279 (15%)
Query: 134 NFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 192
+ R E LG+G FG V+ G W NGT VA+KTL G + +L E
Sbjct: 186 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGNMSPEAFLQEAQV 233
Query: 193 LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGS----LPLPWSIRMKIAL 248
+ L H LV+L + ++ +V E+M +GSL + F KG L LP + M A
Sbjct: 234 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLD--FLKGEMGKYLRLPQLVDM--AA 288
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
A G+A++ ++RD + +NIL+ + K++DFGL + ED +
Sbjct: 289 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLGR-LIEDNEYTARQGAKF 344
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDK 368
+ APE + G T KSDV+SFG++L E+ T R N R L
Sbjct: 345 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQV 395
Query: 369 RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARP 407
R YR+ P + + L QC +DP+ RP
Sbjct: 396 ERGYRMPCPP-------ECPESLHDLMCQCWRKDPEERP 427
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V+ G+ N T VAVKTL G + +L E N + L H
Sbjct: 20 LGAGQFGEVWMGYYN-NST---------KVAVKTLK-PGTMSVQAFLEEANLMKTLQHDK 68
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK--GSLPLPWSIRMKIALGAAKGLAFLH 258
LV+L +++ ++ EFM +GSL + L G + LP I + A+G+A++
Sbjct: 69 LVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQI--AEGMAYIE 126
Query: 259 EEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYV 318
K I+RD + +N+L+ K++DFGLA+ ED + + APE +
Sbjct: 127 R---KNYIHRDLRAANVLVSESLMCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAI 182
Query: 319 MTGHLTSKSDVYSFGVVLLEMLT 341
G T KS+V+SFG++L E++T
Sbjct: 183 NFGCFTIKSNVWSFGILLYEIVT 205
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 122/300 (40%), Gaps = 45/300 (15%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGNL-LH 198
LG G FG V VE K L VAVK L KE L +E+ + +L H
Sbjct: 39 LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 94
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPL-------------------P 239
N+V L+G C L++ E+ G L N L RK L P
Sbjct: 95 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRP 154
Query: 240 WSIR--MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPED 297
+R + + A+G+AFL A K I+RD N+LL + AK+ DFGLA+D D
Sbjct: 155 LELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 211
Query: 298 GKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL 357
V + APE + T +SDV+S+G++L E+ S+ N
Sbjct: 212 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF----SLGLN-------- 259
Query: 358 VEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLK 417
P + +FY+L+ + + + C + +P RP ++ L+
Sbjct: 260 ---PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 316
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 131/289 (45%), Gaps = 38/289 (13%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGNLLHP 199
LG+G FG V++G + G +P T VA+KT+N ++ E+L E + +
Sbjct: 27 LGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHL------FRKGSLPLPWSIRMKIALGA--A 251
++V+L+G + L++ E M RG L+++L + P S+ I + A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 252 KGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYG 311
G+A+L+ ++RD N ++ D+ K+ DFG+ +D E + +
Sbjct: 143 DGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 199
Query: 312 YAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRF 371
+ +PE + G T+ SDV+SFGVVL E+ T L E +P+ G
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAE--QPYQGLSNE- 241
Query: 372 YRLLDPRLEGHFSIKGSQ---KATQLAAQCLSRDPKARPRMSEVVETLK 417
++L +EG K +L C +PK RP E++ ++K
Sbjct: 242 -QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 108/217 (49%), Gaps = 16/217 (7%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 187
+L + E ++G G FG V G ++ G V VA+KTL + + ++L
Sbjct: 39 ELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDV------AVAIKTLKVGYTEKQRRDFL 92
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
E + +G HPN+V L G ++V EFM G+L+ L RK + +
Sbjct: 93 CEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFL-RKHDGQFTVIQLVGML 151
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAK---DAPEDGKTHVST 304
G A G+ +L A+ ++RD NIL++++ K+SDFGL++ D PE T
Sbjct: 152 RGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGG 208
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
++ + APE + TS SDV+S+G+V+ E+++
Sbjct: 209 KI--PVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 127/289 (43%), Gaps = 44/289 (15%)
Query: 141 LGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDG-----LQGHKEWLAEVNFLG 194
+G G FG V+KG W + VAVK LN LQ K EV L
Sbjct: 32 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKN---EVGVLR 75
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGL 254
H N++ +GY Q +V ++ SL +HL + IA A+G+
Sbjct: 76 KTRHVNILLFMGYSTAP-QLAIVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGM 133
Query: 255 AFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
+LH K +I+RD K++NI L D K+ DFGLA + +H ++ G+ + A
Sbjct: 134 DYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 190
Query: 315 PEYVM---TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWA-RPHLGDKRR 370
PE + + + +SDVY+FG+VL E++TG+ + + N ++E R L
Sbjct: 191 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIEMVGRGSLSPDLS 248
Query: 371 FYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
R P+ + +L A+CL + RP ++ ++ L
Sbjct: 249 KVRSNCPK-----------RMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 104/213 (48%), Gaps = 14/213 (6%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 192
R+ + S LG+G FG V E P+ TG VAVK L H G +++ E+
Sbjct: 10 RHLKYISQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 64
Query: 193 LGNLLHPNLVKL--VGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGA 250
L L +VK V Y LV E++P G L + L R + L S + +
Sbjct: 65 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQI 123
Query: 251 AKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT- 309
KG+ +L + ++RD NIL++++ + K++DFGLAK P D K + R G
Sbjct: 124 CKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD-KDYYVVREPGQS 179
Query: 310 -YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ APE + + +SDV+SFGVVL E+ T
Sbjct: 180 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 104/213 (48%), Gaps = 14/213 (6%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 192
R+ + S LG+G FG V E P+ TG VAVK L H G +++ E+
Sbjct: 11 RHLKYISQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 65
Query: 193 LGNLLHPNLVKL--VGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGA 250
L L +VK V Y LV E++P G L + L R + L S + +
Sbjct: 66 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQI 124
Query: 251 AKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT- 309
KG+ +L + ++RD NIL++++ + K++DFGLAK P D K + R G
Sbjct: 125 CKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD-KDYYVVREPGQS 180
Query: 310 -YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ APE + + +SDV+SFGVVL E+ T
Sbjct: 181 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 106/214 (49%), Gaps = 22/214 (10%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK--EWLAEVNFLGNLL 197
+LGEG FG V +G +++ + GT L VAVKT+ D + E+L+E + +
Sbjct: 41 ILGEGEFGSVMEGNLKQ------EDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFS 94
Query: 198 HPNLVKLVGYCIEDDQR-----LLVYEFMPRGSLENHL----FRKGSLPLPWSIRMKIAL 248
HPN+++L+G CIE + +++ FM G L +L G +P +K +
Sbjct: 95 HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMV 154
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
A G+ +L + + ++RD N +L D ++DFGL+K G + R+
Sbjct: 155 DIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKI-YSGDYYRQGRIAK 210
Query: 309 T-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ A E + TSKSDV++FGV + E+ T
Sbjct: 211 MPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 117/297 (39%), Gaps = 44/297 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE----VNFLGNL 196
LG G FG V VE +K +TVAVK L +E L +++LGN
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 108
Query: 197 LHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK----------------GSLPLPW 240
H N+V L+G C L++ E+ G L N L RK L L
Sbjct: 109 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT 300
+ + AKG+AFL A K I+RD NILL K+ DFGLA+ D
Sbjct: 168 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNY 224
Query: 301 HVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEW 360
V + APE + T +SDV+S+G+ L E+ + S
Sbjct: 225 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS--------------- 269
Query: 361 ARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLK 417
P + +FY+++ + + C DP RP ++V+ ++
Sbjct: 270 PYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 104/213 (48%), Gaps = 14/213 (6%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 192
R+ + S LG+G FG V E P+ TG VAVK L H G +++ E+
Sbjct: 23 RHLKYISQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 77
Query: 193 LGNLLHPNLVKL--VGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGA 250
L L +VK V Y LV E++P G L + L R + L S + +
Sbjct: 78 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQI 136
Query: 251 AKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT- 309
KG+ +L + ++RD NIL++++ + K++DFGLAK P D K + R G
Sbjct: 137 CKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD-KDYYVVREPGQS 192
Query: 310 -YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ APE + + +SDV+SFGVVL E+ T
Sbjct: 193 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 121/291 (41%), Gaps = 36/291 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGNL-LH 198
LG G FG V VE K L VAVK L KE L +E+ + +L H
Sbjct: 54 LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKG-------SLPLPWSIR-----MKI 246
N+V L+G C L++ E+ G L N L RK + + S +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF 169
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
+ A+G+AFL A K I+RD N+LL + AK+ DFGLA+D D V
Sbjct: 170 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
+ APE + T +SDV+S+G++L E+ S+ N P +
Sbjct: 227 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF----SLGLN-----------PYPGIL 271
Query: 367 DKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLK 417
+FY+L+ + + + C + +P RP ++ L+
Sbjct: 272 VNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 138/307 (44%), Gaps = 38/307 (12%)
Query: 123 FMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDG-LQ 181
F+ ++ ++A LG+G FG V++G + G +P T VA+KT+N ++
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMR 61
Query: 182 GHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL------FRKGS 235
E+L E + + ++V+L+G + L++ E M RG L+++L
Sbjct: 62 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 121
Query: 236 LPLPWSIRMKIALGA--AKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKD 293
+ P S+ I + A G+A+L+ ++RD N ++ D+ K+ DFG+ +D
Sbjct: 122 VLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 178
Query: 294 APEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNG 353
E + + + +PE + G T+ SDV+SFGVVL E+ T
Sbjct: 179 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------------ 226
Query: 354 EHNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQ---KATQLAAQCLSRDPKARPRMS 410
L E +P+ G ++L +EG K +L C +PK RP
Sbjct: 227 ---LAE--QPYQGLSNE--QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFL 279
Query: 411 EVVETLK 417
E++ ++K
Sbjct: 280 EIISSIK 286
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 138/311 (44%), Gaps = 38/311 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGNLLHP 199
LG+G FG V++G + G +P T VA+KT+N ++ E+L E + +
Sbjct: 26 LGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHL------FRKGSLPLPWSIRMKIALGA--A 251
++V+L+G + L++ E M RG L+++L + P S+ I + A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 252 KGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYG 311
G+A+L+ ++RD N ++ D+ K+ DFG+ +D E + +
Sbjct: 142 DGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 312 YAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRF 371
+ +PE + G T+ SDV+SFGVVL E+ T L E +P+ G
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAE--QPYQGLSNE- 240
Query: 372 YRLLDPRLEGHFSIKGSQ---KATQLAAQCLSRDPKARPRMSEVVETLKPLQNLKDMASS 428
++L +EG K +L C +PK RP E++ ++K S
Sbjct: 241 -QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS 299
Query: 429 SYYFQTMQADN 439
YY + + +N
Sbjct: 300 FYYSEENKMEN 310
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 123/295 (41%), Gaps = 43/295 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNL-LH 198
LGEG FG V E G KP VAVK L D + + ++E+ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIR--------------M 244
N++ L+G C +D ++ E+ +G+L +L + L +S +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
A A+G+ +L A K I+RD N+L+ D K++DFGLA+D +T
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTT 210
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPH 364
+ APE + T +SDV+SFGV+L E+ T S P E
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---------- 260
Query: 365 LGDKRRFYRLLDPRLEGHFSIKGSQKATQLAA---QCLSRDPKARPRMSEVVETL 416
++LL EGH K S +L C P RP ++VE L
Sbjct: 261 ------LFKLLK---EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 104/213 (48%), Gaps = 14/213 (6%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 192
R+ + S LG+G FG V E P+ TG VAVK L H G +++ E+
Sbjct: 7 RHLKYISQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 61
Query: 193 LGNLLHPNLVKL--VGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGA 250
L L +VK V Y + LV E++P G L + L R + L S + +
Sbjct: 62 LKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQI 120
Query: 251 AKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT- 309
KG+ +L + ++RD NIL++++ + K++DFGLAK P D V R G
Sbjct: 121 CKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXV-VREPGQS 176
Query: 310 -YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ APE + + +SDV+SFGVVL E+ T
Sbjct: 177 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 127/289 (43%), Gaps = 44/289 (15%)
Query: 141 LGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDG-----LQGHKEWLAEVNFLG 194
+G G FG V+KG W + VAVK LN LQ K EV L
Sbjct: 20 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKN---EVGVLR 63
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGL 254
H N++ +GY + Q +V ++ SL +HL + IA A+G+
Sbjct: 64 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGM 121
Query: 255 AFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
+LH K +I+RD K++NI L D K+ DFGLA +H ++ G+ + A
Sbjct: 122 DYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 178
Query: 315 PEYVM---TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWA-RPHLGDKRR 370
PE + + + +SDVY+FG+VL E++TG+ + + N ++E R L
Sbjct: 179 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIEMVGRGSLSPDLS 236
Query: 371 FYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
R P+ + +L A+CL + RP ++ ++ L
Sbjct: 237 KVRSNCPK-----------RMKRLMAECLKKKRDERPSFPRILAEIEEL 274
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 131/289 (45%), Gaps = 38/289 (13%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGNLLHP 199
LG+G FG V++G + G +P T VA+KT+N ++ E+L E + +
Sbjct: 20 LGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHL------FRKGSLPLPWSIRMKIALGA--A 251
++V+L+G + L++ E M RG L+++L + P S+ I + A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 252 KGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYG 311
G+A+L+ ++RD N ++ D+ K+ DFG+ +D E + +
Sbjct: 136 DGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 192
Query: 312 YAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRF 371
+ +PE + G T+ SDV+SFGVVL E+ T L E +P+ G
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAE--QPYQGLSNE- 234
Query: 372 YRLLDPRLEGHFSIKGSQ---KATQLAAQCLSRDPKARPRMSEVVETLK 417
++L +EG K +L C +PK RP E++ ++K
Sbjct: 235 -QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 133/289 (46%), Gaps = 38/289 (13%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGNLLHP 199
LG+G FG V++G + G +P T VA+KT+N ++ E+L E + +
Sbjct: 33 LGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHL------FRKGSLPLPWSIRMKIALGA--A 251
++V+L+G + L++ E M RG L+++L + P S+ I + A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 148
Query: 252 KGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYG 311
G+A+L+ A K ++RD N ++ D+ K+ DFG+ +D E + +
Sbjct: 149 DGMAYLN--ANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 312 YAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRF 371
+ +PE + G T+ SDV+SFGVVL E+ T L E +P+ G
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAE--QPYQGLSNE- 247
Query: 372 YRLLDPRLEGHFSIKGS---QKATQLAAQCLSRDPKARPRMSEVVETLK 417
++L +EG K +L C +PK RP E++ ++K
Sbjct: 248 -QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 295
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 128/288 (44%), Gaps = 42/288 (14%)
Query: 141 LGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDG-----LQGHKEWLAEVNFLG 194
+G G FG V+KG W + VAVK LN LQ K EV L
Sbjct: 44 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKN---EVGVLR 87
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGL 254
H N++ +GY + Q +V ++ SL +HL + + IA A+G+
Sbjct: 88 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGM 145
Query: 255 AFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
+LH K +I+RD K++NI L D K+ DFGLA + +H ++ G+ + A
Sbjct: 146 DYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 202
Query: 315 PEYVMTGH---LTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRF 371
PE + + +SDVY+FG+VL E++TG+ N N + + R +L
Sbjct: 203 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSK 261
Query: 372 YRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
R P+ +L A+CL + RP +++ +++ L
Sbjct: 262 VRSNCPK-----------AMKRLMAECLKKKRDERPLFPQILASIELL 298
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 128/288 (44%), Gaps = 42/288 (14%)
Query: 141 LGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDG-----LQGHKEWLAEVNFLG 194
+G G FG V+KG W + VAVK LN LQ K EV L
Sbjct: 36 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKN---EVGVLR 79
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGL 254
H N++ +GY + Q +V ++ SL +HL + + IA A+G+
Sbjct: 80 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGM 137
Query: 255 AFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
+LH K +I+RD K++NI L D K+ DFGLA + +H ++ G+ + A
Sbjct: 138 DYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 194
Query: 315 PEYVMTGH---LTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRF 371
PE + + +SDVY+FG+VL E++TG+ N N + + R +L
Sbjct: 195 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSK 253
Query: 372 YRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
R P+ +L A+CL + RP +++ +++ L
Sbjct: 254 VRSNCPK-----------AMKRLMAECLKKKRDERPLFPQILASIELL 290
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 131/289 (45%), Gaps = 38/289 (13%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGNLLHP 199
LG+G FG V++G + G +P T VA+KT+N ++ E+L E + +
Sbjct: 27 LGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHL------FRKGSLPLPWSIRMKIALGA--A 251
++V+L+G + L++ E M RG L+++L + P S+ I + A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 252 KGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYG 311
G+A+L+ ++RD N ++ D+ K+ DFG+ +D E + +
Sbjct: 143 DGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 199
Query: 312 YAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRF 371
+ +PE + G T+ SDV+SFGVVL E+ T L E +P+ G
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAE--QPYQGLSNE- 241
Query: 372 YRLLDPRLEGHFSIKGSQ---KATQLAAQCLSRDPKARPRMSEVVETLK 417
++L +EG K +L C +PK RP E++ ++K
Sbjct: 242 -QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 131/289 (45%), Gaps = 38/289 (13%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGNLLHP 199
LG+G FG V++G + G +P T VA+KT+N ++ E+L E + +
Sbjct: 55 LGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 110
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHL------FRKGSLPLPWSIRMKIALGA--A 251
++V+L+G + L++ E M RG L+++L + P S+ I + A
Sbjct: 111 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 170
Query: 252 KGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYG 311
G+A+L+ ++RD N ++ D+ K+ DFG+ +D E + +
Sbjct: 171 DGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 227
Query: 312 YAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRF 371
+ +PE + G T+ SDV+SFGVVL E+ T L E +P+ G
Sbjct: 228 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAE--QPYQGLSNE- 269
Query: 372 YRLLDPRLEGHFSIKGSQ---KATQLAAQCLSRDPKARPRMSEVVETLK 417
++L +EG K +L C +PK RP E++ ++K
Sbjct: 270 -QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 317
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 128/288 (44%), Gaps = 42/288 (14%)
Query: 141 LGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDG-----LQGHKEWLAEVNFLG 194
+G G FG V+KG W + VAVK LN LQ K EV L
Sbjct: 16 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKN---EVGVLR 59
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGL 254
H N++ +GY + Q +V ++ SL +HL + + IA A+G+
Sbjct: 60 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGM 117
Query: 255 AFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
+LH K +I+RD K++NI L D K+ DFGLA + +H ++ G+ + A
Sbjct: 118 DYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 174
Query: 315 PEYVMTGH---LTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRF 371
PE + + +SDVY+FG+VL E++TG+ N N + + R +L
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSK 233
Query: 372 YRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
R P+ +L A+CL + RP +++ +++ L
Sbjct: 234 VRSNCPK-----------AMKRLMAECLKKKRDERPLFPQILASIELL 270
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 131/289 (45%), Gaps = 38/289 (13%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGNLLHP 199
LG+G FG V++G + G +P T VA+KT+N ++ E+L E + +
Sbjct: 26 LGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHL------FRKGSLPLPWSIRMKIALGA--A 251
++V+L+G + L++ E M RG L+++L + P S+ I + A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 252 KGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYG 311
G+A+L+ ++RD N ++ D+ K+ DFG+ +D E + +
Sbjct: 142 DGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 312 YAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRF 371
+ +PE + G T+ SDV+SFGVVL E+ T L E +P+ G
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAE--QPYQGLSNE- 240
Query: 372 YRLLDPRLEGHFSIKGSQ---KATQLAAQCLSRDPKARPRMSEVVETLK 417
++L +EG K +L C +PK RP E++ ++K
Sbjct: 241 -QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 288
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 123/295 (41%), Gaps = 43/295 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNL-LH 198
LGEG FG V E G KP VAVK L D + + ++E+ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIR--------------M 244
N++ L+G C +D ++ E+ +G+L +L + L +S +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
A A+G+ +L A K I+RD N+L+ D K++DFGLA+D +T
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPH 364
+ APE + T +SDV+SFGV+L E+ T S P E
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---------- 260
Query: 365 LGDKRRFYRLLDPRLEGHFSIKGSQKATQLAA---QCLSRDPKARPRMSEVVETL 416
++LL EGH K S +L C P RP ++VE L
Sbjct: 261 ------LFKLLK---EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 123/295 (41%), Gaps = 43/295 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNL-LH 198
LGEG FG V E G KP VAVK L D + + ++E+ + + H
Sbjct: 25 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 82
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIR--------------M 244
N++ L+G C +D ++ E+ +G+L +L + L +S +
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
A A+G+ +L A K I+RD N+L+ D K++DFGLA+D +T
Sbjct: 143 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 199
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPH 364
+ APE + T +SDV+SFGV+L E+ T S P E
Sbjct: 200 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---------- 249
Query: 365 LGDKRRFYRLLDPRLEGHFSIKGSQKATQLAA---QCLSRDPKARPRMSEVVETL 416
++LL EGH K S +L C P RP ++VE L
Sbjct: 250 ------LFKLLK---EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 295
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 30/213 (14%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 193
+ + E LG G FG V+ ++ VAVKT+ G + +LAE N +
Sbjct: 183 SLKLEKKLGAGQFGEVWMATYNKHTK----------VAVKTMK-PGSMSVEAFLAEANVM 231
Query: 194 GNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKG 253
L H LVKL + + ++ EFM +GSL + L P + + A+G
Sbjct: 232 KTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 290
Query: 254 LAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTY--G 311
+AF+ + + I+RD + +NIL+ A K++DFGLA RV +
Sbjct: 291 MAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLA-------------RVGAKFPIK 334
Query: 312 YAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRR 344
+ APE + G T KSDV+SFG++L+E++T R
Sbjct: 335 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 367
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 123/295 (41%), Gaps = 43/295 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNL-LH 198
LGEG FG V E G KP VAVK L D + + ++E+ + + H
Sbjct: 29 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIR--------------M 244
N++ L+G C +D ++ E+ +G+L +L + L +S +
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
A A+G+ +L A K I+RD N+L+ D K++DFGLA+D +T
Sbjct: 147 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 203
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPH 364
+ APE + T +SDV+SFGV+L E+ T S P E
Sbjct: 204 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---------- 253
Query: 365 LGDKRRFYRLLDPRLEGHFSIKGSQKATQLAA---QCLSRDPKARPRMSEVVETL 416
++LL EGH K S +L C P RP ++VE L
Sbjct: 254 ------LFKLLK---EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 299
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 123/295 (41%), Gaps = 43/295 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNL-LH 198
LGEG FG V E G KP VAVK L D + + ++E+ + + H
Sbjct: 28 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIR--------------M 244
N++ L+G C +D ++ E+ +G+L +L + L +S +
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
A A+G+ +L A K I+RD N+L+ D K++DFGLA+D +T
Sbjct: 146 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 202
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPH 364
+ APE + T +SDV+SFGV+L E+ T S P E
Sbjct: 203 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---------- 252
Query: 365 LGDKRRFYRLLDPRLEGHFSIKGSQKATQLAA---QCLSRDPKARPRMSEVVETL 416
++LL EGH K S +L C P RP ++VE L
Sbjct: 253 ------LFKLLK---EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 298
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 123/295 (41%), Gaps = 43/295 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNL-LH 198
LGEG FG V E G KP VAVK L D + + ++E+ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIR--------------M 244
N++ L+G C +D ++ E+ +G+L +L + L +S +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
A A+G+ +L A K I+RD N+L+ D K++DFGLA+D +T
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPH 364
+ APE + T +SDV+SFGV+L E+ T S P E
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---------- 260
Query: 365 LGDKRRFYRLLDPRLEGHFSIKGSQKATQLAA---QCLSRDPKARPRMSEVVETL 416
++LL EGH K S +L C P RP ++VE L
Sbjct: 261 ------LFKLLK---EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 131/289 (45%), Gaps = 38/289 (13%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGNLLHP 199
LG+G FG V++G + G +P T VA+KT+N ++ E+L E + +
Sbjct: 23 LGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 78
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHL------FRKGSLPLPWSIRMKIALGA--A 251
++V+L+G + L++ E M RG L+++L + P S+ I + A
Sbjct: 79 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 138
Query: 252 KGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYG 311
G+A+L+ ++RD N ++ D+ K+ DFG+ +D E + +
Sbjct: 139 DGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 195
Query: 312 YAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRF 371
+ +PE + G T+ SDV+SFGVVL E+ T L E +P+ G
Sbjct: 196 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAE--QPYQGLSNE- 237
Query: 372 YRLLDPRLEGHFSIKGSQ---KATQLAAQCLSRDPKARPRMSEVVETLK 417
++L +EG K +L C +PK RP E++ ++K
Sbjct: 238 -QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 285
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 133/289 (46%), Gaps = 38/289 (13%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGNLLHP 199
LG+G FG V++G + G +P T VA+KT+N ++ E+L E + +
Sbjct: 33 LGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHL------FRKGSLPLPWSIRMKIALGA--A 251
++V+L+G + L++ E M RG L+++L + P S+ I + A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148
Query: 252 KGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYG 311
G+A+L+ A K ++RD N ++ D+ K+ DFG+ +D E + +
Sbjct: 149 DGMAYLN--ANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 312 YAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRF 371
+ +PE + G T+ SDV+SFGVVL E+ T L E +P+ G
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAE--QPYQGLSNE- 247
Query: 372 YRLLDPRLEGHFSIKGSQ---KATQLAAQCLSRDPKARPRMSEVVETLK 417
++L +EG K +L C +PK RP E++ ++K
Sbjct: 248 -QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 295
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 104/231 (45%), Gaps = 44/231 (19%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGNLLHP 199
+GEG FG VF+ G P +P T VAVK L + ++ E + +P
Sbjct: 55 IGEGAFGRVFQA--RAPGLLPYEPFT--MVAVKMLKEEASADMQADFQREAALMAEFDNP 110
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----------------------GSL 236
N+VKL+G C L++E+M G L N R G
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDL-NEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 237 PLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA-- 294
PL + ++ IA A G+A+L +E+ ++RD T N L+ + K++DFGL+++
Sbjct: 170 PLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYS 226
Query: 295 ----PEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
DG + R M PE + T++SDV+++GVVL E+ +
Sbjct: 227 ADYYKADGNDAIPIRWM------PPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 123/295 (41%), Gaps = 43/295 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNL-LH 198
LGEG FG V E G KP VAVK L D + + ++E+ + + H
Sbjct: 77 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIR--------------M 244
N++ L+G C +D ++ E+ +G+L +L + L +S +
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
A A+G+ +L A K I+RD N+L+ D K++DFGLA+D +T
Sbjct: 195 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 251
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPH 364
+ APE + T +SDV+SFGV+L E+ T S P E
Sbjct: 252 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---------- 301
Query: 365 LGDKRRFYRLLDPRLEGHFSIKGSQKATQLAA---QCLSRDPKARPRMSEVVETL 416
++LL EGH K S +L C P RP ++VE L
Sbjct: 302 ------LFKLLK---EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 347
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 140/295 (47%), Gaps = 40/295 (13%)
Query: 128 LKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EW 186
++L +F S LG G G VFK KP +GL +A K ++ + + +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQI 51
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ E+ L P +V G D + + E M GSL+ L + G +P I K+
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILGKV 109
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
++ KGL +L E+ + +++RD K SNIL+++ KL DFG++ + ++
Sbjct: 110 SIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSF 163
Query: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
+GT Y +PE + H + +SD++S G+ L+EM GR + P+ + E +RP +
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP--PDAK----EDSRPPMA 217
Query: 367 DKRRFYRLLD-------PRL-EGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVV 413
+ LLD P+L G FS+ + +CL ++P R + +++
Sbjct: 218 ----IFELLDYIVNEPPPKLPSGVFSL----EFQDFVNKCLIKNPAERADLKQLM 264
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 130 LATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEW 186
+ ++ R LG+G FG V +G AP G ++VAVK L D L + ++
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRG----EWDAP--SGKTVSVAVKCLKPDVLSQPEAMDDF 62
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ EVN + +L H NL++L G + ++ V E P GSL + L RK +
Sbjct: 63 IREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRY 120
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
A+ A+G+ +L K I+RD N+LL K+ DFGL + P++ +V
Sbjct: 121 AVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 177
Query: 307 MGT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + APE + T + SD + FGV L EM T
Sbjct: 178 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 122/295 (41%), Gaps = 43/295 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGNL-LH 198
LG G FG V +E + K T TVAVK L H+ ++E+ L ++ H
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 199 PNLVKLVGYCIEDDQRLLVY-EFMPRGSLENHLFRKGSLPLPWSIR-------------- 243
N+V L+G C + L+V EF G+L +L K + +P+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVS 303
+ + AKG+ FL A + I+RD NILL K+ DFGLA+D +D
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 198
Query: 304 TRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARP 363
+ APE + T +SDV+SFGV+L E+ + A P
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASP 241
Query: 364 HLGDK--RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETL 416
+ G K F R L + + Q C +P RP SE+VE L
Sbjct: 242 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 122/295 (41%), Gaps = 43/295 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGNL-LH 198
LG G FG V +E + K T TVAVK L H+ ++E+ L ++ H
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 199 PNLVKLVGYCIEDDQRLLVY-EFMPRGSLENHLFRKGSLPLPWSIR-------------- 243
N+V L+G C + L+V EF G+L +L K + +P+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVS 303
+ + AKG+ FL A + I+RD NILL K+ DFGLA+D +D
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 198
Query: 304 TRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARP 363
+ APE + T +SDV+SFGV+L E+ + A P
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASP 241
Query: 364 HLGDK--RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETL 416
+ G K F R L + + Q C +P RP SE+VE L
Sbjct: 242 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 127/288 (44%), Gaps = 42/288 (14%)
Query: 141 LGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDG-----LQGHKEWLAEVNFLG 194
+G G FG V+KG W + VAVK LN LQ K EV L
Sbjct: 43 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKN---EVGVLR 86
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGL 254
H N++ +GY + Q +V ++ SL +HL + + IA A+G+
Sbjct: 87 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGM 144
Query: 255 AFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
+LH K +I+RD K++NI L D K+ DFGLA +H ++ G+ + A
Sbjct: 145 DYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 201
Query: 315 PEYVMTGH---LTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRF 371
PE + + +SDVY+FG+VL E++TG+ N N + + R +L
Sbjct: 202 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSK 260
Query: 372 YRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
R P+ +L A+CL + RP +++ +++ L
Sbjct: 261 VRSNCPK-----------AMKRLMAECLKKKRDERPLFPQILASIELL 297
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 130/289 (44%), Gaps = 38/289 (13%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGNLLHP 199
LG+G FG V++G + G +P T VA+KT+N ++ E+L E + +
Sbjct: 20 LGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHL------FRKGSLPLPWSIRMKIALGA--A 251
++V+L+G + L++ E M RG L+++L + P S+ I + A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 252 KGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYG 311
G+A+L+ ++RD N + D+ K+ DFG+ +D E + +
Sbjct: 136 DGMAYLNA---NKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 192
Query: 312 YAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRF 371
+ +PE + G T+ SDV+SFGVVL E+ T L E +P+ G
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAE--QPYQGLSNE- 234
Query: 372 YRLLDPRLEGHFSIKGSQ---KATQLAAQCLSRDPKARPRMSEVVETLK 417
++L +EG K +L C +PK RP E++ ++K
Sbjct: 235 -QVLRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 115/226 (50%), Gaps = 28/226 (12%)
Query: 128 LKLATRNFRPESL-----LGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTL-NHDGL 180
+K+ R F+ L LG G FG V KG W+ E + + V +K + + G
Sbjct: 3 MKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKI------PVCIKVIEDKSGR 56
Query: 181 QGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFR-KGSLP-- 237
Q + + +G+L H ++V+L+G C +L V +++P GSL +H+ + +G+L
Sbjct: 57 QSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQ 115
Query: 238 --LPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAP 295
L W +++ AKG+ +L E +++R+ N+LL + +++DFG+A P
Sbjct: 116 LLLNWGVQI------AKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLP 166
Query: 296 EDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
D K + + + A E + G T +SDV+S+GV + E++T
Sbjct: 167 PDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 107/209 (51%), Gaps = 12/209 (5%)
Query: 135 FRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFL 193
+ E ++G G FG V G ++ G + VA+KTL + +++L+E + +
Sbjct: 16 IKIEKVIGVGEFGEVCSGRLKVPGKREI------CVAIKTLKAGYTDKQRRDFLSEASIM 69
Query: 194 GNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKG 253
G HPN++ L G + +++ E+M GSL+ L RK + + G G
Sbjct: 70 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL-RKNDGRFTVIQLVGMLRGIGSG 128
Query: 254 LAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT-YGY 312
+ +L ++ ++RD NIL++++ K+SDFG+++ +D + +TR +
Sbjct: 129 MKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRW 185
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
APE + TS SDV+S+G+V+ E+++
Sbjct: 186 TAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 127/288 (44%), Gaps = 42/288 (14%)
Query: 141 LGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDG-----LQGHKEWLAEVNFLG 194
+G G FG V+KG W + VAVK LN LQ K EV L
Sbjct: 44 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKN---EVGVLR 87
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGL 254
H N++ +GY + Q +V ++ SL +HL + + IA A+G+
Sbjct: 88 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGM 145
Query: 255 AFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
+LH K +I+RD K++NI L D K+ DFGLA +H ++ G+ + A
Sbjct: 146 DYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 202
Query: 315 PEYVMTGH---LTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRF 371
PE + + +SDVY+FG+VL E++TG+ N N + + R +L
Sbjct: 203 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSK 261
Query: 372 YRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
R P+ +L A+CL + RP +++ +++ L
Sbjct: 262 VRSNCPK-----------AMKRLMAECLKKKRDERPLFPQILASIELL 298
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 127/288 (44%), Gaps = 42/288 (14%)
Query: 141 LGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDG-----LQGHKEWLAEVNFLG 194
+G G FG V+KG W + VAVK LN LQ K EV L
Sbjct: 18 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKN---EVGVLR 61
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGL 254
H N++ +GY + Q +V ++ SL +HL + + IA A+G+
Sbjct: 62 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGM 119
Query: 255 AFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
+LH K +I+RD K++NI L D K+ DFGLA +H ++ G+ + A
Sbjct: 120 DYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 176
Query: 315 PEYVMTGH---LTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRF 371
PE + + +SDVY+FG+VL E++TG+ N N + + R +L
Sbjct: 177 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSK 235
Query: 372 YRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
R P+ +L A+CL + RP +++ +++ L
Sbjct: 236 VRSNCPK-----------AMKRLMAECLKKKRDERPLFPQILASIELL 272
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 130 LATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEW 186
+ ++ R LG+G FG V +G AP G ++VAVK L D L + ++
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRG----EWDAP--SGKTVSVAVKCLKPDVLSQPEAMDDF 62
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ EVN + +L H NL++L G + ++ V E P GSL + L RK +
Sbjct: 63 IREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRY 120
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
A+ A+G+ +L K I+RD N+LL K+ DFGL + P++ +V
Sbjct: 121 AVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 177
Query: 307 MGT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + APE + T + SD + FGV L EM T
Sbjct: 178 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 130 LATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEW 186
+ ++ R LG+G FG V +G AP G ++VAVK L D L + ++
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRG----EWDAP--SGKTVSVAVKCLKPDVLSQPEAMDDF 58
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ EVN + +L H NL++L G + ++ V E P GSL + L RK +
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRY 116
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
A+ A+G+ +L K I+RD N+LL K+ DFGL + P++ +V
Sbjct: 117 AVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 173
Query: 307 MGT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + APE + T + SD + FGV L EM T
Sbjct: 174 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 125/271 (46%), Gaps = 40/271 (14%)
Query: 141 LGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
LG G FG V+ G W NG VA+KTL G + +L E + L H
Sbjct: 17 LGNGQFGEVWMGTW---NGNT--------KVAIKTLK-PGTMSPESFLEEAQIMKKLKHD 64
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKG---SLPLPWSIRMKIALGAAKGLAF 256
LV+L + ++ +V E+M +GSL + L + G +L LP + M A A G+A+
Sbjct: 65 KLVQLYA-VVSEEPIYIVTEYMNKGSLLDFL-KDGEGRALKLPNLVDM--AAQVAAGMAY 120
Query: 257 LHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPE 316
+ I+RD +++NIL+ K++DFGLA+ ED + + APE
Sbjct: 121 IER---MNYIHRDLRSANILVGNGLICKIADFGLAR-LIEDNEXTARQGAKFPIKWTAPE 176
Query: 317 YVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLD 376
+ G T KSDV+SFG++L E++T R N R L R YR+
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN---------REVLEQVERGYRMPC 227
Query: 377 PRLEGHFSIKGSQKATQLAAQCLSRDPKARP 407
P+ + S+ +L C +DP+ RP
Sbjct: 228 PQ-DCPISLH------ELMIHCWKKDPEERP 251
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 110/215 (51%), Gaps = 23/215 (10%)
Query: 134 NFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTL-NHDGLQGHKEWLAEVN 191
R +LG G FG V KG W+ E + + V +K + + G Q + +
Sbjct: 32 ELRKLKVLGSGVFGTVHKGVWIPEGESIKI------PVCIKVIEDKSGRQSFQAVTDHML 85
Query: 192 FLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFR-KGSLP----LPWSIRMKI 246
+G+L H ++V+L+G C +L V +++P GSL +H+ + +G+L L W +++
Sbjct: 86 AIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI-- 142
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
AKG+ +L E +++R+ N+LL + +++DFG+A P D K + +
Sbjct: 143 ----AKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEA 195
Query: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ A E + G T +SDV+S+GV + E++T
Sbjct: 196 KTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 107/209 (51%), Gaps = 12/209 (5%)
Query: 135 FRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFL 193
+ E ++G G FG V G ++ G + VA+KTL + +++L+E + +
Sbjct: 10 IKIEKVIGVGEFGEVCSGRLKVPGKREI------CVAIKTLKAGYTDKQRRDFLSEASIM 63
Query: 194 GNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKG 253
G HPN++ L G + +++ E+M GSL+ L RK + + G G
Sbjct: 64 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL-RKNDGRFTVIQLVGMLRGIGSG 122
Query: 254 LAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT-YGY 312
+ +L ++ ++RD NIL++++ K+SDFG+++ +D + +TR +
Sbjct: 123 MKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRW 179
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
APE + TS SDV+S+G+V+ E+++
Sbjct: 180 TAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 122/295 (41%), Gaps = 43/295 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNL-LH 198
LGEG FG V E G KP VAVK L D + + ++E+ + + H
Sbjct: 21 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIR--------------M 244
N++ L+G C +D ++ E+ +G+L +L + L + +
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
A A+G+ +L A K I+RD N+L+ D K++DFGLA+D +T
Sbjct: 139 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 195
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPH 364
+ APE + T +SDV+SFGV+L E+ T S P E
Sbjct: 196 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---------- 245
Query: 365 LGDKRRFYRLLDPRLEGHFSIKGSQKATQLAA---QCLSRDPKARPRMSEVVETL 416
++LL EGH K S +L C P RP ++VE L
Sbjct: 246 ------LFKLLK---EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 291
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 122/295 (41%), Gaps = 43/295 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGNL-LH 198
LG G FG V +E + K T TVAVK L H+ ++E+ L ++ H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 199 PNLVKLVGYCIEDDQRLLVY-EFMPRGSLENHLFRKGSLPLPWSIR-------------- 243
N+V L+G C + L+V EF G+L +L K + +P+ +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVS 303
+ + AKG+ FL A + I+RD NILL K+ DFGLA+D +D
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 304 TRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARP 363
+ APE + T +SDV+SFGV+L E+ + A P
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASP 250
Query: 364 HLGDK--RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETL 416
+ G K F R L + + Q C +P RP SE+VE L
Sbjct: 251 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 130 LATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEW 186
+ ++ R LG+G FG V +G AP G ++VAVK L D L + ++
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRG----EWDAP--SGKTVSVAVKCLKPDVLSQPEAMDDF 68
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ EVN + +L H NL++L G + ++ V E P GSL + L RK +
Sbjct: 69 IREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRY 126
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
A+ A+G+ +L K I+RD N+LL K+ DFGL + P++ +V
Sbjct: 127 AVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 183
Query: 307 MGT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + APE + T + SD + FGV L EM T
Sbjct: 184 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 128/294 (43%), Gaps = 54/294 (18%)
Query: 141 LGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDG-----LQGHKEWLAEVNFLG 194
+G G FG V+KG W + VAVK LN LQ K EV L
Sbjct: 21 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKN---EVGVLR 64
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL------FRKGSLPLPWSIRMKIAL 248
H N++ +GY + Q +V ++ SL +HL F L + IA
Sbjct: 65 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKL-------IDIAR 116
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
A+G+ +LH K +I+RD K++NI L D K+ DFGLA +H ++ G
Sbjct: 117 QTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 173
Query: 309 TYGYAAPEYVMTGH---LTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHL 365
+ + APE + + +SDVY+FG+VL E++TG+ N N + + R +L
Sbjct: 174 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYL 232
Query: 366 GDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
R P+ +L A+CL + RP +++ +++ L
Sbjct: 233 SPDLSKVRSNCPK-----------AMKRLMAECLKKKRDERPLFPQILASIELL 275
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 130 LATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEW 186
+ ++ R LG+G FG V +G AP G ++VAVK L D L + ++
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRG----EWDAP--SGKTVSVAVKCLKPDVLSQPEAMDDF 58
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ EVN + +L H NL++L G + ++ V E P GSL + L RK +
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRY 116
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
A+ A+G+ +L K I+RD N+LL K+ DFGL + P++ +V
Sbjct: 117 AVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 173
Query: 307 MGT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + APE + T + SD + FGV L EM T
Sbjct: 174 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 128/294 (43%), Gaps = 54/294 (18%)
Query: 141 LGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDG-----LQGHKEWLAEVNFLG 194
+G G FG V+KG W + VAVK LN LQ K EV L
Sbjct: 16 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKN---EVGVLR 59
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL------FRKGSLPLPWSIRMKIAL 248
H N++ +GY + Q +V ++ SL +HL F L + IA
Sbjct: 60 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKL-------IDIAR 111
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
A+G+ +LH K +I+RD K++NI L D K+ DFGLA +H ++ G
Sbjct: 112 QTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 168
Query: 309 TYGYAAPEYVMTGH---LTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHL 365
+ + APE + + +SDVY+FG+VL E++TG+ N N + + R +L
Sbjct: 169 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYL 227
Query: 366 GDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
R P+ +L A+CL + RP +++ +++ L
Sbjct: 228 SPDLSKVRSNCPK-----------AMKRLMAECLKKKRDERPLFPQILASIELL 270
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 127/288 (44%), Gaps = 42/288 (14%)
Query: 141 LGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDG-----LQGHKEWLAEVNFLG 194
+G G FG V+KG W + VAVK LN LQ K EV L
Sbjct: 21 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKN---EVGVLR 64
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGL 254
H N++ +GY + Q +V ++ SL +HL + + IA A+G+
Sbjct: 65 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGM 122
Query: 255 AFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
+LH K +I+RD K++NI L D K+ DFGLA +H ++ G+ + A
Sbjct: 123 DYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 179
Query: 315 PEYVMTGH---LTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRF 371
PE + + +SDVY+FG+VL E++TG+ N N + + R +L
Sbjct: 180 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSK 238
Query: 372 YRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
R P+ +L A+CL + RP +++ +++ L
Sbjct: 239 VRSNCPK-----------AMKRLMAECLKKKRDERPLFPQILASIELL 275
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 122/295 (41%), Gaps = 43/295 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNL-LH 198
LGEG FG V E G KP VAVK L D + + ++E+ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIR--------------M 244
N++ L+G C +D ++ E+ +G+L +L + L + +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
A A+G+ +L A K I+RD N+L+ D K++DFGLA+D +T
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPH 364
+ APE + T +SDV+SFGV+L E+ T S P E
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---------- 260
Query: 365 LGDKRRFYRLLDPRLEGHFSIKGSQKATQLAA---QCLSRDPKARPRMSEVVETL 416
++LL EGH K S +L C P RP ++VE L
Sbjct: 261 ------LFKLLK---EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 122/295 (41%), Gaps = 43/295 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGNL-LH 198
LG G FG V +E + K T TVAVK L H+ ++E+ L ++ H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 199 PNLVKLVGYCIEDDQRLLVY-EFMPRGSLENHLFRKGSLPLPWSIR-------------- 243
N+V L+G C + L+V EF G+L +L K + +P+ +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVS 303
+ + AKG+ FL A + I+RD NILL K+ DFGLA+D +D
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRK 207
Query: 304 TRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARP 363
+ APE + T +SDV+SFGV+L E+ + A P
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASP 250
Query: 364 HLGDK--RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETL 416
+ G K F R L + + Q C +P RP SE+VE L
Sbjct: 251 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 122/295 (41%), Gaps = 43/295 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGNL-LH 198
LG G FG V +E + K T TVAVK L H+ ++E+ L ++ H
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 199 PNLVKLVGYCIEDDQRLLVY-EFMPRGSLENHLFRKGSLPLPWSIR-------------- 243
N+V L+G C + L+V EF G+L +L K + +P+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVS 303
+ + AKG+ FL A + I+RD NILL K+ DFGLA+D +D
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 198
Query: 304 TRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARP 363
+ APE + T +SDV+SFGV+L E+ + A P
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASP 241
Query: 364 HLGDK--RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETL 416
+ G K F R L + + Q C +P RP SE+VE L
Sbjct: 242 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 122/295 (41%), Gaps = 43/295 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGNL-LH 198
LG G FG V +E + K T TVAVK L H+ ++E+ L ++ H
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 199 PNLVKLVGYCIEDDQRLLVY-EFMPRGSLENHLFRKGSLPLPWSIR-------------- 243
N+V L+G C + L+V EF G+L +L K + +P+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVS 303
+ + AKG+ FL A + I+RD NILL K+ DFGLA+D +D
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 198
Query: 304 TRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARP 363
+ APE + T +SDV+SFGV+L E+ + A P
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASP 241
Query: 364 HLGDK--RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETL 416
+ G K F R L + + Q C +P RP SE+VE L
Sbjct: 242 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 117/240 (48%), Gaps = 25/240 (10%)
Query: 112 EELKVASQLRK----FMFNDLK---LATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKP 164
EEL++ Q RK F+ K L +F S LG G G VFK KP
Sbjct: 5 EELELDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFK--------VSHKP 56
Query: 165 GTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPR 223
+GL +A K ++ + + + + E+ L P +V G D + + E M
Sbjct: 57 -SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 115
Query: 224 GSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNA 283
GSL+ L + G +P I K+++ KGL +L E+ + +++RD K SNIL+++
Sbjct: 116 GSLDQVLKKAGRIP--EQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEI 171
Query: 284 KLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
KL DFG++ + ++ +GT Y +PE + H + +SD++S G+ L+EM GR
Sbjct: 172 KLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 118/283 (41%), Gaps = 36/283 (12%)
Query: 127 DLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 186
D ++ F LLG+G FG V V+E T G A+K L + + E
Sbjct: 4 DPRVTMNEFEYLKLLGKGTFGKVI--LVKEKAT-------GRYYAMKILKKEVIVAKDEV 54
Query: 187 ---LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIR 243
L E L N HP L L D+ V E+ G L HL R+ +
Sbjct: 55 AHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF 114
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVS 303
+ +A L +LH +EK V+YRD K N++LD D + K++DFGL K+ +DG T
Sbjct: 115 YGAEIVSA--LDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--M 168
Query: 304 TRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARP 363
GT Y APE + D + GVV+ EM+ GR L+
Sbjct: 169 KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI----- 223
Query: 364 HLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKAR 406
L ++ RF R L P +A L + L +DPK R
Sbjct: 224 -LMEEIRFPRTLGP------------EAKSLLSGLLKKDPKQR 253
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 122/295 (41%), Gaps = 43/295 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGNL-LH 198
LG G FG V +E + K T TVAVK L H+ ++E+ L ++ H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 199 PNLVKLVGYCIEDDQRLLVY-EFMPRGSLENHLFRKGSLPLPWSIR-------------- 243
N+V L+G C + L+V EF G+L +L K + +P+ +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVS 303
+ + AKG+ FL A + I+RD NILL K+ DFGLA+D +D
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 207
Query: 304 TRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARP 363
+ APE + T +SDV+SFGV+L E+ + A P
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASP 250
Query: 364 HLGDK--RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETL 416
+ G K F R L + + Q C +P RP SE+VE L
Sbjct: 251 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 127/294 (43%), Gaps = 54/294 (18%)
Query: 141 LGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDG-----LQGHKEWLAEVNFLG 194
+G G FG V+KG W + VAVK LN LQ K EV L
Sbjct: 16 IGSGSFGTVYKGKWHGD-------------VAVKMLNVTAPTPQQLQAFKN---EVGVLR 59
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL------FRKGSLPLPWSIRMKIAL 248
H N++ +GY Q +V ++ SL +HL F L + IA
Sbjct: 60 KTRHVNILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKL-------IDIAR 111
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
A+G+ +LH K +I+RD K++NI L D K+ DFGLA +H ++ G
Sbjct: 112 QTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 168
Query: 309 TYGYAAPEYVMTGH---LTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHL 365
+ + APE + + +SDVY+FG+VL E++TG+ N N + + R +L
Sbjct: 169 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYL 227
Query: 366 GDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
R P+ +L A+CL + RP +++ +++ L
Sbjct: 228 SPDLSKVRSNCPK-----------AMKRLMAECLKKKRDERPLFPQILASIELL 270
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 118/281 (41%), Gaps = 36/281 (12%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-- 186
++ F LLG+G FG V V+E T G A+K L + + E
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKVI--LVKEKAT-------GRYYAMKILKKEVIVAKDEVAH 197
Query: 187 -LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMK 245
L E L N HP L L D+ V E+ G L HL R+ +
Sbjct: 198 TLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYG 257
Query: 246 IALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTR 305
+ +A L +LH +EK V+YRD K N++LD D + K++DFGL K+ +DG T +
Sbjct: 258 AEIVSA--LDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-- 311
Query: 306 VMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHL 365
GT Y APE + D + GVV+ EM+ GR L+ L
Sbjct: 312 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI------L 365
Query: 366 GDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKAR 406
++ RF R L P +A L + L +DPK R
Sbjct: 366 MEEIRFPRTLGP------------EAKSLLSGLLKKDPKQR 394
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 26/220 (11%)
Query: 131 ATRNFRPESL------LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK 184
TR+ PE LG+G FG V+K +E T + A K ++ + +
Sbjct: 29 VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKE---------TSVLAAAKVIDTKSEEELE 79
Query: 185 EWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
+++ E++ L + HPN+VKL+ ++ ++ EF G+++ + PL S
Sbjct: 80 DYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER-PLTESQIQ 138
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
+ L +LH + +I+RD K NIL D + KL+DFG++ A
Sbjct: 139 VVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS--AKNTRXIQRRD 193
Query: 305 RVMGTYGYAAPEYVMTGH-----LTSKSDVYSFGVVLLEM 339
+GT + APE VM K+DV+S G+ L+EM
Sbjct: 194 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 26/220 (11%)
Query: 131 ATRNFRPESL------LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK 184
TR+ PE LG+G FG V+K +E T + A K ++ + +
Sbjct: 29 VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKE---------TSVLAAAKVIDTKSEEELE 79
Query: 185 EWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
+++ E++ L + HPN+VKL+ ++ ++ EF G+++ + PL S
Sbjct: 80 DYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER-PLTESQIQ 138
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
+ L +LH + +I+RD K NIL D + KL+DFG++ A
Sbjct: 139 VVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS--AKNTRTIQRRD 193
Query: 305 RVMGTYGYAAPEYVMTGH-----LTSKSDVYSFGVVLLEM 339
+GT + APE VM K+DV+S G+ L+EM
Sbjct: 194 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 118/281 (41%), Gaps = 36/281 (12%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-- 186
++ F LLG+G FG V V+E T G A+K L + + E
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKVI--LVKEKAT-------GRYYAMKILKKEVIVAKDEVAH 194
Query: 187 -LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMK 245
L E L N HP L L D+ V E+ G L HL R+ +
Sbjct: 195 TLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYG 254
Query: 246 IALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTR 305
+ +A L +LH +EK V+YRD K N++LD D + K++DFGL K+ +DG T +
Sbjct: 255 AEIVSA--LDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-- 308
Query: 306 VMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHL 365
GT Y APE + D + GVV+ EM+ GR L+ L
Sbjct: 309 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI------L 362
Query: 366 GDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKAR 406
++ RF R L P +A L + L +DPK R
Sbjct: 363 MEEIRFPRTLGP------------EAKSLLSGLLKKDPKQR 391
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 26/220 (11%)
Query: 131 ATRNFRPESL------LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK 184
TR+ PE LG+G FG V+K +E T + A K ++ + +
Sbjct: 29 VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKE---------TSVLAAAKVIDTKSEEELE 79
Query: 185 EWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
+++ E++ L + HPN+VKL+ ++ ++ EF G+++ + PL S
Sbjct: 80 DYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER-PLTESQIQ 138
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
+ L +LH + +I+RD K NIL D + KL+DFG++ A
Sbjct: 139 VVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS--AKNTRXIQRRD 193
Query: 305 RVMGTYGYAAPEYVMTGH-----LTSKSDVYSFGVVLLEM 339
+GT + APE VM K+DV+S G+ L+EM
Sbjct: 194 XFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 121/291 (41%), Gaps = 39/291 (13%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGNL-LH 198
LG G FG V +E + K T TVAVK L H+ ++E+ L ++ H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 199 PNLVKLVGYCIEDDQRLLVY-EFMPRGSLENHLFRKGSLPLPWSIRMK----------IA 247
N+V L+G C + L+V EF G+L +L K + +P+ K +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYS 150
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
AKG+ FL A + I+RD NILL K+ DFGLA+D +D
Sbjct: 151 FQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 207
Query: 308 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
+ APE + T +SDV+SFGV+L E+ + A P+ G
Sbjct: 208 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASPYPGV 250
Query: 368 K--RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETL 416
K F R L + + Q C +P RP SE+VE L
Sbjct: 251 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 121/291 (41%), Gaps = 39/291 (13%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGNL-LH 198
LG G FG V +E + K T TVAVK L H+ ++E+ L ++ H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 199 PNLVKLVGYCIEDDQRLLVY-EFMPRGSLENHLFRKGSLPLPWSIRMK----------IA 247
N+V L+G C + L+V EF G+L +L K + +P+ K +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYS 150
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
AKG+ FL A + I+RD NILL K+ DFGLA+D +D
Sbjct: 151 FQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDAR 207
Query: 308 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
+ APE + T +SDV+SFGV+L E+ + A P+ G
Sbjct: 208 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASPYPGV 250
Query: 368 K--RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETL 416
K F R L + + Q C +P RP SE+VE L
Sbjct: 251 KIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 121/293 (41%), Gaps = 41/293 (13%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGNL-LH 198
LG G FG V +E + K T TVAVK L H+ ++E+ L ++ H
Sbjct: 37 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 199 PNLVKLVGYCIEDDQRLLVY-EFMPRGSLENHLFRKGSLPLPWSIR------------MK 245
N+V L+G C + L+V EF G+L +L K + +P+ +
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIX 152
Query: 246 IALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTR 305
+ AKG+ FL A + I+RD NILL K+ DFGLA+D +D
Sbjct: 153 YSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 306 VMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHL 365
+ APE + T +SDV+SFGV+L E+ + A P+
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASPYP 252
Query: 366 GDK--RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETL 416
G K F R L + + Q C +P RP SE+VE L
Sbjct: 253 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 102/216 (47%), Gaps = 15/216 (6%)
Query: 130 LATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEW 186
+ ++ R LG+G FG V +G AP G ++VAVK L D L + ++
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRG----EWDAP--SGKTVSVAVKCLKPDVLSQPEAMDDF 68
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ EVN + +L H NL++L G + ++ V E P GSL + L RK +
Sbjct: 69 IREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRY 126
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
A+ A+G+ +L K I+RD N+LL K+ DFGL + P++ V
Sbjct: 127 AVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEH 183
Query: 307 MGT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + APE + T + SD + FGV L EM T
Sbjct: 184 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 102/216 (47%), Gaps = 15/216 (6%)
Query: 130 LATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEW 186
+ ++ R LG+G FG V +G AP G ++VAVK L D L + ++
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRG----EWDAP--SGKTVSVAVKCLKPDVLSQPEAMDDF 58
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ EVN + +L H NL++L G + ++ V E P GSL + L RK +
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRL-RKHQGHFLLGTLSRY 116
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
A+ A+G+ +L K I+RD N+LL K+ DFGL + P++ V
Sbjct: 117 AVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEH 173
Query: 307 MGT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + APE + T + SD + FGV L EM T
Sbjct: 174 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 122/295 (41%), Gaps = 43/295 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGNL-LH 198
LG G FG V +E + K T TVAVK L H+ ++E+ L ++ H
Sbjct: 72 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 127
Query: 199 PNLVKLVGYCIEDDQRLLVY-EFMPRGSLENHLFRKGSLPLPWSIR-------------- 243
N+V L+G C + L+V EF G+L +L K + +P+ +
Sbjct: 128 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 187
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVS 303
+ + AKG+ FL A + I+RD NILL K+ DFGLA+D +D
Sbjct: 188 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 244
Query: 304 TRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARP 363
+ APE + T +SDV+SFGV+L E+ + A P
Sbjct: 245 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASP 287
Query: 364 HLGDK--RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETL 416
+ G K F R L + + Q C +P RP SE+VE L
Sbjct: 288 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 121/294 (41%), Gaps = 42/294 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGNL-LH 198
LG G FG V +E + K T TVAVK L H+ ++E+ L ++ H
Sbjct: 36 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 91
Query: 199 PNLVKLVGYCIEDDQRLLVY-EFMPRGSLENHLFRKGSLPLPWSI-------------RM 244
N+V L+G C + L+V EF G+L +L K + +P+ +
Sbjct: 92 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLI 151
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
+ AKG+ FL A + I+RD NILL K+ DFGLA+D +D
Sbjct: 152 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPH 364
+ APE + T +SDV+SFGV+L E+ + A P+
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASPY 251
Query: 365 LGDK--RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETL 416
G K F R L + + Q C +P RP SE+VE L
Sbjct: 252 PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 27/220 (12%)
Query: 131 ATRNFRPES---LLGE-GGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 186
TR+ PE ++GE G FG V+K +E T + A K ++ + +++
Sbjct: 4 VTRDLNPEDFWEIIGELGDFGKVYKAQNKE---------TSVLAAAKVIDTKSEEELEDY 54
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ E++ L + HPN+VKL+ ++ ++ EF G+++ + PL S +
Sbjct: 55 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER-PLTESQIQVV 113
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTR- 305
L +LH + +I+RD K NIL D + KL+DFG+ + ++ +T + R
Sbjct: 114 CKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGV---SAKNTRTXIQRRD 167
Query: 306 -VMGTYGYAAPEYVMTGH-----LTSKSDVYSFGVVLLEM 339
+GT + APE VM K+DV+S G+ L+EM
Sbjct: 168 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 187
+L +F S LG G G VFK KP +GL +A K ++ + + + +
Sbjct: 64 ELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQII 114
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
E+ L P +V G D + + E M GSL+ L + G +P I K++
Sbjct: 115 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILGKVS 172
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
+ KGL +L E+ + +++RD K SNIL+++ KL DFG++ + ++ +
Sbjct: 173 IAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFV 226
Query: 308 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
GT Y +PE + H + +SD++S G+ L+EM GR
Sbjct: 227 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 127/301 (42%), Gaps = 43/301 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNL-LH 198
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL-----------FRKGSLP---LPWSIRM 244
N++ L+G C +D ++ E+ +G+L +L + +P + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
A+G+ +L A + I+RD N+L+ + K++DFGLA+D +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPH 364
+ APE + T +SDV+SFGV++ E+ T S P E
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---------- 267
Query: 365 LGDKRRFYRLLDPRLEGHFSIKGSQKATQLAA---QCLSRDPKARPRMSEVVETLKPLQN 421
++LL EGH K + +L C P RP ++VE L +
Sbjct: 268 ------LFKLLK---EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 422 L 422
L
Sbjct: 319 L 319
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 127/301 (42%), Gaps = 43/301 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNL-LH 198
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL-----------FRKGSLP---LPWSIRM 244
N++ L+G C +D ++ E+ +G+L +L + +P + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
A+G+ +L A + I+RD N+L+ + K++DFGLA+D +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPH 364
+ APE + T +SDV+SFGV++ E+ T S P E
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---------- 267
Query: 365 LGDKRRFYRLLDPRLEGHFSIKGSQKATQLAA---QCLSRDPKARPRMSEVVETLKPLQN 421
++LL EGH K + +L C P RP ++VE L +
Sbjct: 268 ------LFKLLK---EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 422 L 422
L
Sbjct: 319 L 319
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 119/282 (42%), Gaps = 38/282 (13%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-- 186
++ F LLG+G FG V V+E T G A+K L + + E
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVI--LVKEKAT-------GRYYAMKILKKEVIVAKDEVAH 55
Query: 187 -LAEVNFLGNLLHPNLVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
L E L N HP L L Y + RL V E+ G L HL R+ +
Sbjct: 56 TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 114
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
+ +A L +LH +EK V+YRD K N++LD D + K++DFGL K+ +DG T
Sbjct: 115 GAEIVSA--LDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MK 168
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPH 364
GT Y APE + D + GVV+ EM+ GR L+
Sbjct: 169 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI------ 222
Query: 365 LGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKAR 406
L ++ RF R L P +A L + L +DPK R
Sbjct: 223 LMEEIRFPRTLGP------------EAKSLLSGLLKKDPKQR 252
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 117/281 (41%), Gaps = 36/281 (12%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-- 186
++ F LLG+G FG V V+E T G A+K L + + E
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVI--LVKEKAT-------GRYYAMKILKKEVIVAKDEVAH 54
Query: 187 -LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMK 245
L E L N HP L L D+ V E+ G L HL R+ +
Sbjct: 55 TLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYG 114
Query: 246 IALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTR 305
+ +A L +LH +EK V+YRD K N++LD D + K++DFGL K+ +DG T
Sbjct: 115 AEIVSA--LDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKX 168
Query: 306 VMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHL 365
GT Y APE + D + GVV+ EM+ GR L+ L
Sbjct: 169 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI------L 222
Query: 366 GDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKAR 406
++ RF R L P +A L + L +DPK R
Sbjct: 223 MEEIRFPRTLGP------------EAKSLLSGLLKKDPKQR 251
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 136/307 (44%), Gaps = 38/307 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEVNFLGNLLHP 199
+G+G FG VFKG +N T V VA+K ++ + ++ E+ L P
Sbjct: 15 IGKGSFGEVFKGI--DNRTQKV-------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
+ K G ++D + ++ E++ GS + L G PL + I KGL +LH
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG--PLDETQIATILREILKGLDYLHS 122
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
E + I+RD K +N+LL KL+DFG+A D + +T V GT + APE +
Sbjct: 123 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQIKRNTFV-GTPFWMAPEVIK 177
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPRL 379
SK+D++S G+ +E+ G + P L+ P P L
Sbjct: 178 QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTL 224
Query: 380 EGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPLQNLKDMASSSYYFQTMQADN 439
EG++ S+ + CL+++P RP E+++ L+N K +SY + +
Sbjct: 225 EGNY----SKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAK---KTSYLTELIDRYK 277
Query: 440 TWSIRNS 446
W S
Sbjct: 278 RWKAEQS 284
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 94/207 (45%), Gaps = 10/207 (4%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWLAEVNFLGNLLHP 199
LG G FG V++G V P + L VAVKTL Q ++L E + H
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 111
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLP-LPWSIRMKIALGAAKGLAF-L 257
N+V+ +G ++ R ++ E M G L++ L P P S+ M L A+ +A
Sbjct: 112 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 171
Query: 258 HEEAEKPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
E I+RD N LL AK+ DFG+A+D G M +
Sbjct: 172 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 231
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLT 341
PE M G TSK+D +SFGV+L E+ +
Sbjct: 232 PEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 94/207 (45%), Gaps = 10/207 (4%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWLAEVNFLGNLLHP 199
LG G FG V++G V P + L VAVKTL Q ++L E + H
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 134
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLP-LPWSIRMKIALGAAKGLAF-L 257
N+V+ +G ++ R ++ E M G L++ L P P S+ M L A+ +A
Sbjct: 135 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 194
Query: 258 HEEAEKPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
E I+RD N LL AK+ DFG+A+D G M +
Sbjct: 195 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 254
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLT 341
PE M G TSK+D +SFGV+L E+ +
Sbjct: 255 PEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 187
+L +F S LG G G VFK KP +GL +A K ++ + + + +
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQII 55
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
E+ L P +V G D + + E M GSL+ L + G +P I K++
Sbjct: 56 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILGKVS 113
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
+ KGL +L E+ + +++RD K SNIL+++ KL DFG++ ++ ++ +
Sbjct: 114 IAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE----MANEFV 167
Query: 308 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
GT Y +PE + H + +SD++S G+ L+EM GR
Sbjct: 168 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 108/217 (49%), Gaps = 18/217 (8%)
Query: 128 LKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EW 186
++L +F S LG G G VFK KP +GL +A K ++ + + +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQI 51
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ E+ L P +V G D + + E M GSL+ L + G +P I K+
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILGKV 109
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
++ KGL +L E+ + +++RD K SNIL+++ KL DFG++ + ++
Sbjct: 110 SIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSF 163
Query: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
+GT Y +PE + H + +SD++S G+ L+EM GR
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 108/217 (49%), Gaps = 18/217 (8%)
Query: 128 LKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EW 186
++L +F S LG G G VFK KP +GL +A K ++ + + +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQI 51
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ E+ L P +V G D + + E M GSL+ L + G +P I K+
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILGKV 109
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
++ KGL +L E+ + +++RD K SNIL+++ KL DFG++ + ++
Sbjct: 110 SIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSF 163
Query: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
+GT Y +PE + H + +SD++S G+ L+EM GR
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 105/212 (49%), Gaps = 17/212 (8%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA--EVN 191
+F +LG+G FG VF +P +G A+K L L+ E +
Sbjct: 29 HFELLKVLGQGSFGKVFLV------RKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERD 82
Query: 192 FLGNLLHPNLVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGA 250
L ++ HP +VKL Y + + +L L+ +F+ G L L K + ++ +A
Sbjct: 83 ILADVNHPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLA-EL 139
Query: 251 AKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTY 310
A GL LH +IYRD K NILLD + + KL+DFGL+K+A + K S GT
Sbjct: 140 ALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGTV 194
Query: 311 GYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
Y APE V + +D +S+GV++ EMLTG
Sbjct: 195 EYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 127/301 (42%), Gaps = 43/301 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNL-LH 198
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL-----------FRKGSLP---LPWSIRM 244
N++ L+G C +D ++ E+ +G+L +L + +P + + +
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
A+G+ +L A + I+RD N+L+ + K++DFGLA+D +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPH 364
+ APE + T +SDV+SFGV++ E+ T S P E
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---------- 267
Query: 365 LGDKRRFYRLLDPRLEGHFSIKGSQKATQLAA---QCLSRDPKARPRMSEVVETLKPLQN 421
++LL EGH K + +L C P RP ++VE L +
Sbjct: 268 ------LFKLLK---EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 422 L 422
L
Sbjct: 319 L 319
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 136/310 (43%), Gaps = 40/310 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEVNFLGNLLHP 199
+G+G FG VFKG +N T V VA+K ++ + ++ E+ L P
Sbjct: 30 IGKGSFGEVFKGI--DNRTQKV-------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 80
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
+ K G ++D + ++ E++ GS + L G PL + I KGL +LH
Sbjct: 81 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG--PLDETQIATILREILKGLDYLHS 137
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVS-TRVMGTYGYAAPEYV 318
E + I+RD K +N+LL KL+DFG+A + T + +GT + APE +
Sbjct: 138 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD---TQIKRNXFVGTPFWMAPEVI 191
Query: 319 MTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPR 378
SK+D++S G+ +E+ G + P L+ P P
Sbjct: 192 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PT 238
Query: 379 LEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPLQNLKDMASSSYYFQTMQAD 438
LEG++ S+ + CL+++P RP E+++ L+N K +SY + +
Sbjct: 239 LEGNY----SKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAK---KTSYLTELIDRY 291
Query: 439 NTWSIRNSKN 448
W S +
Sbjct: 292 KRWKAEQSHD 301
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 128/302 (42%), Gaps = 46/302 (15%)
Query: 116 VASQLRKFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTL 175
+ S+ R++ D ++ RP LG+G FG V+ ++ + +A+K L
Sbjct: 3 MESKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVL 46
Query: 176 NHDGLQG---HKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFR 232
L+ + EV +L HPN+++L GY + + L+ E+ PRG + L +
Sbjct: 47 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQK 106
Query: 233 KGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAK 292
+ L A L++ H K VI+RD K N+LL + K++DFG +
Sbjct: 107 LSKFDEQRTATYITEL--ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV 161
Query: 293 DAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPN 352
AP + T + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 162 HAPSSRR----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
Query: 353 GEHNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
+ + R+E F ++ A L ++ L +P RP + EV
Sbjct: 218 ETYKRIS------------------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 259
Query: 413 VE 414
+E
Sbjct: 260 LE 261
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 127/301 (42%), Gaps = 43/301 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNL-LH 198
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKH 100
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL-----------FRKGSLP---LPWSIRM 244
N++ L+G C +D ++ E+ +G+L +L + +P + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
A+G+ +L A + I+RD N+L+ + K++DFGLA+D +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPH 364
+ APE + T +SDV+SFGV++ E+ T S P E
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---------- 267
Query: 365 LGDKRRFYRLLDPRLEGHFSIKGSQKATQLAA---QCLSRDPKARPRMSEVVETLKPLQN 421
++LL EGH K + +L C P RP ++VE L +
Sbjct: 268 ------LFKLLK---EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 422 L 422
L
Sbjct: 319 L 319
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 127/301 (42%), Gaps = 43/301 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNL-LH 198
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL-----------FRKGSLP---LPWSIRM 244
N++ L+G C +D ++ E+ +G+L +L + +P + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
A+G+ +L A + I+RD N+L+ + K++DFGLA+D +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTT 217
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPH 364
+ APE + T +SDV+SFGV++ E+ T S P E
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---------- 267
Query: 365 LGDKRRFYRLLDPRLEGHFSIKGSQKATQLAA---QCLSRDPKARPRMSEVVETLKPLQN 421
++LL EGH K + +L C P RP ++VE L +
Sbjct: 268 ------LFKLLK---EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 422 L 422
L
Sbjct: 319 L 319
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 105/225 (46%), Gaps = 24/225 (10%)
Query: 128 LKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW- 186
+KL NF +LG+G FG V + GT A+K L D + +
Sbjct: 16 VKLTDFNFL--MVLGKGSFGKVMLA---------DRKGTEELYAIKILKKDVVIQDDDVE 64
Query: 187 --LAEVNFLGNLLHPNLVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIR 243
+ E L L P + + C + RL V E++ G L H+ + G P ++
Sbjct: 65 CTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVF 124
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVS 303
A + GL FLH+ +IYRD K N++LD++ + K++DFG+ K+ DG V+
Sbjct: 125 Y--AAEISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG---VT 176
Query: 304 TR-VMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMD 347
TR GT Y APE + D +++GV+L EML G+ D
Sbjct: 177 TREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 127/301 (42%), Gaps = 43/301 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNL-LH 198
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL-----------FRKGSLP---LPWSIRM 244
N++ L+G C +D ++ E+ +G+L +L + +P + + +
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
A+G+ +L A + I+RD N+L+ + K++DFGLA+D +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPH 364
+ APE + T +SDV+SFGV++ E+ T S P E
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---------- 267
Query: 365 LGDKRRFYRLLDPRLEGHFSIKGSQKATQLAA---QCLSRDPKARPRMSEVVETLKPLQN 421
++LL EGH K + +L C P RP ++VE L +
Sbjct: 268 ------LFKLLK---EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 422 L 422
L
Sbjct: 319 L 319
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 108/217 (49%), Gaps = 18/217 (8%)
Query: 128 LKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EW 186
++L +F S LG G G VFK KP +GL +A K ++ + + +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQI 51
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ E+ L P +V G D + + E M GSL+ L + G +P I K+
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILGKV 109
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
++ KGL +L E+ + +++RD K SNIL+++ KL DFG++ + ++
Sbjct: 110 SIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSF 163
Query: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
+GT Y +PE + H + +SD++S G+ L+EM GR
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 108/217 (49%), Gaps = 18/217 (8%)
Query: 128 LKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EW 186
++L +F S LG G G VFK KP +GL +A K ++ + + +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQI 51
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ E+ L P +V G D + + E M GSL+ L + G +P I K+
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILGKV 109
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
++ KGL +L E+ + +++RD K SNIL+++ KL DFG++ + ++
Sbjct: 110 SIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSF 163
Query: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
+GT Y +PE + H + +SD++S G+ L+EM GR
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 135/308 (43%), Gaps = 40/308 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEVNFLGNLLHP 199
+G+G FG VFKG +N T V VA+K ++ + ++ E+ L P
Sbjct: 15 IGKGSFGEVFKGI--DNRTQKV-------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
+ K G ++D + ++ E++ GS + L G PL + I KGL +LH
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG--PLDETQIATILREILKGLDYLHS 122
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVS-TRVMGTYGYAAPEYV 318
E + I+RD K +N+LL KL+DFG+A + T + +GT + APE +
Sbjct: 123 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD---TQIKRNXFVGTPFWMAPEVI 176
Query: 319 MTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPR 378
SK+D++S G+ +E+ G + P L+ P P
Sbjct: 177 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PT 223
Query: 379 LEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPLQNLKDMASSSYYFQTMQAD 438
LEG++ S+ + CL+++P RP E+++ L+N K +SY + +
Sbjct: 224 LEGNY----SKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAK---KTSYLTELIDRY 276
Query: 439 NTWSIRNS 446
W S
Sbjct: 277 KRWKAEQS 284
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 127/301 (42%), Gaps = 43/301 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNL-LH 198
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 89 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 146
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL-----------FRKGSLP---LPWSIRM 244
N++ L+G C +D ++ E+ +G+L +L + +P + + +
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
A+G+ +L A + I+RD N+L+ + K++DFGLA+D +T
Sbjct: 207 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 263
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPH 364
+ APE + T +SDV+SFGV++ E+ T S P E
Sbjct: 264 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---------- 313
Query: 365 LGDKRRFYRLLDPRLEGHFSIKGSQKATQLAA---QCLSRDPKARPRMSEVVETLKPLQN 421
++LL EGH K + +L C P RP ++VE L +
Sbjct: 314 ------LFKLLK---EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364
Query: 422 L 422
L
Sbjct: 365 L 365
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 94/207 (45%), Gaps = 10/207 (4%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWLAEVNFLGNLLHP 199
LG G FG V++G V P + L VAVKTL Q ++L E + L H
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQ 94
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLP-LPWSIRMKIALGAAKGLAF-L 257
N+V+ +G ++ R ++ E M G L++ L P P S+ M L A+ +A
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 258 HEEAEKPVIYRDFKTSNILLDAD---YNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
E I+RD N LL AK+ DFG+A+D M +
Sbjct: 155 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLT 341
PE M G TSK+D +SFGV+L E+ +
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 130/305 (42%), Gaps = 52/305 (17%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTG--LTVAVKTLNHDGLQGH-KEWLAEVNFLGNLL 197
LGEG FG V K TA G TVAVK L + ++ L+E N L +
Sbjct: 31 LGEGEFGKVVKA------TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN 84
Query: 198 HPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSL--------------------- 236
HP+++KL G C +D LL+ E+ GSL L +
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 237 -PLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAP 295
L + A ++G+ +L AE +++RD NIL+ K+SDFGL++D
Sbjct: 145 RALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 296 EDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
E+ ++ + A E + T++SDV+SFGV+L E++T + N
Sbjct: 202 EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT----LGGN------ 251
Query: 356 NLVEWARPHLG-DKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
P+ G R + LL S++ +L QC ++P RP +++ +
Sbjct: 252 -------PYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISK 304
Query: 415 TLKPL 419
L+ +
Sbjct: 305 DLEKM 309
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 20/216 (9%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENG--TAPVKPGTGLTVAVKTLNHDGLQGHKEW 186
K + ++F+ LG G FG V NG A + V +K + H
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTN------- 54
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
E L + HP ++++ G + Q ++ +++ G L + L + P P +
Sbjct: 55 -DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNP--VAKFY 111
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
A L +LH K +IYRD K NILLD + + K++DFG AK P+ V+ +
Sbjct: 112 AAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXL 163
Query: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
GT Y APE V T D +SFG+++ EML G
Sbjct: 164 CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 187
+L +F S LG G G VFK KP +GL +A K ++ + + + +
Sbjct: 21 ELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQII 71
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
E+ L P +V G D + + E M GSL+ L + G +P I K++
Sbjct: 72 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILGKVS 129
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
+ KGL +L E+ + +++RD K SNIL+++ KL DFG++ + ++ +
Sbjct: 130 IAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFV 183
Query: 308 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
GT Y +PE + H + +SD++S G+ L+EM GR
Sbjct: 184 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 127/301 (42%), Gaps = 43/301 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNL-LH 198
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 30 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 87
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL-----------FRKGSLP---LPWSIRM 244
N++ L+G C +D ++ E+ +G+L +L + +P + + +
Sbjct: 88 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 147
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
A+G+ +L A + I+RD N+L+ + K++DFGLA+D +T
Sbjct: 148 SCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTT 204
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPH 364
+ APE + T +SDV+SFGV++ E+ T S P E
Sbjct: 205 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---------- 254
Query: 365 LGDKRRFYRLLDPRLEGHFSIKGSQKATQLAA---QCLSRDPKARPRMSEVVETLKPLQN 421
++LL EGH K + +L C P RP ++VE L +
Sbjct: 255 ------LFKLLK---EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 305
Query: 422 L 422
L
Sbjct: 306 L 306
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 94/207 (45%), Gaps = 10/207 (4%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWLAEVNFLGNLLHP 199
LG G FG V++G V P + L VAVKTL Q ++L E + L H
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQ 108
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLP-LPWSIRMKIALGAAKGLAF-L 257
N+V+ +G ++ R ++ E M G L++ L P P S+ M L A+ +A
Sbjct: 109 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 258 HEEAEKPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
E I+RD N LL AK+ DFG+A+D M +
Sbjct: 169 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLT 341
PE M G TSK+D +SFGV+L E+ +
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 127/301 (42%), Gaps = 43/301 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNL-LH 198
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 32 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 89
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL-----------FRKGSLP---LPWSIRM 244
N++ L+G C +D ++ E+ +G+L +L + +P + + +
Sbjct: 90 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
A+G+ +L A + I+RD N+L+ + K++DFGLA+D +T
Sbjct: 150 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 206
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPH 364
+ APE + T +SDV+SFGV++ E+ T S P E
Sbjct: 207 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---------- 256
Query: 365 LGDKRRFYRLLDPRLEGHFSIKGSQKATQLAA---QCLSRDPKARPRMSEVVETLKPLQN 421
++LL EGH K + +L C P RP ++VE L +
Sbjct: 257 ------LFKLLK---EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 307
Query: 422 L 422
L
Sbjct: 308 L 308
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 127/301 (42%), Gaps = 43/301 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNL-LH 198
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 35 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 92
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL-----------FRKGSLP---LPWSIRM 244
N++ L+G C +D ++ E+ +G+L +L + +P + + +
Sbjct: 93 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 152
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
A+G+ +L A + I+RD N+L+ + K++DFGLA+D +T
Sbjct: 153 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 209
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPH 364
+ APE + T +SDV+SFGV++ E+ T S P E
Sbjct: 210 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---------- 259
Query: 365 LGDKRRFYRLLDPRLEGHFSIKGSQKATQLAA---QCLSRDPKARPRMSEVVETLKPLQN 421
++LL EGH K + +L C P RP ++VE L +
Sbjct: 260 ------LFKLLK---EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 310
Query: 422 L 422
L
Sbjct: 311 L 311
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 130/305 (42%), Gaps = 52/305 (17%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTG--LTVAVKTLNHDGLQGH-KEWLAEVNFLGNLL 197
LGEG FG V K TA G TVAVK L + ++ L+E N L +
Sbjct: 31 LGEGEFGKVVKA------TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN 84
Query: 198 HPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSL--------------------- 236
HP+++KL G C +D LL+ E+ GSL L +
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 237 -PLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAP 295
L + A ++G+ +L AE +++RD NIL+ K+SDFGL++D
Sbjct: 145 RALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 296 EDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
E+ ++ + A E + T++SDV+SFGV+L E++T + N
Sbjct: 202 EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT----LGGN------ 251
Query: 356 NLVEWARPHLG-DKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
P+ G R + LL S++ +L QC ++P RP +++ +
Sbjct: 252 -------PYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISK 304
Query: 415 TLKPL 419
L+ +
Sbjct: 305 DLEKM 309
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 101/214 (47%), Gaps = 16/214 (7%)
Query: 135 FRPES-----LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE 189
RPE +LG+GG+G VF+ V + A + V K + + AE
Sbjct: 14 IRPECFELLRVLGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAE 71
Query: 190 VNFLGNLLHPNLVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL 248
N L + HP +V L+ Y + +L L+ E++ G L L R+G + +
Sbjct: 72 RNILEEVKHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEI 130
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
A L LH+ K +IYRD K NI+L+ + KL+DFGL K++ DG V+ G
Sbjct: 131 SMA--LGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHXFCG 183
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
T Y APE +M D +S G ++ +MLTG
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 101/214 (47%), Gaps = 16/214 (7%)
Query: 135 FRPES-----LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE 189
RPE +LG+GG+G VF+ V + A + V K + + AE
Sbjct: 14 IRPECFELLRVLGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAE 71
Query: 190 VNFLGNLLHPNLVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL 248
N L + HP +V L+ Y + +L L+ E++ G L L R+G + +
Sbjct: 72 RNILEEVKHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEI 130
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
A L LH+ K +IYRD K NI+L+ + KL+DFGL K++ DG V+ G
Sbjct: 131 SMA--LGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHTFCG 183
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
T Y APE +M D +S G ++ +MLTG
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 108/239 (45%), Gaps = 26/239 (10%)
Query: 113 ELKVASQLRKFMFND----LKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGL 168
E K A+ + KF N +KL NF +LG+G FG V + GT
Sbjct: 319 EEKTANTISKFDNNGNRDRMKLTDFNFL--MVLGKGSFGKVM---------LSERKGTDE 367
Query: 169 TVAVKTLNHDGLQGHKE---WLAEVNFLGNLLHPNLVKLVGYCIEDDQRL-LVYEFMPRG 224
AVK L D + + + E L P + + C + RL V E++ G
Sbjct: 368 LYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGG 427
Query: 225 SLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAK 284
L H+ + G P ++ A A GL FL K +IYRD K N++LD++ + K
Sbjct: 428 DLMYHIQQVGRFKEPHAVFY--AAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIK 482
Query: 285 LSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
++DFG+ K+ DG T + GT Y APE + D ++FGV+L EML G+
Sbjct: 483 IADFGMCKENIWDGVT--TKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 127/301 (42%), Gaps = 43/301 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNL-LH 198
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL-----------FRKGSLP---LPWSIRM 244
N++ L+G C +D ++ E+ +G+L +L + +P + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
A+G+ +L A + I+RD N+L+ + +++DFGLA+D +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTT 217
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPH 364
+ APE + T +SDV+SFGV++ E+ T S P E
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---------- 267
Query: 365 LGDKRRFYRLLDPRLEGHFSIKGSQKATQLAA---QCLSRDPKARPRMSEVVETLKPLQN 421
++LL EGH K + +L C P RP ++VE L +
Sbjct: 268 ------LFKLLK---EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 422 L 422
L
Sbjct: 319 L 319
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 121/295 (41%), Gaps = 43/295 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGNL-LH 198
LG G FG V +E + K T TVAVK L H+ ++E+ L ++ H
Sbjct: 37 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 199 PNLVKLVGYCIEDDQRLLVY-EFMPRGSLENHLFRKGSLPLPWSIR-------------- 243
N+V L+G C + L+V EF G+L +L K + +P+
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHL 152
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVS 303
+ + AKG+ FL A + I+RD NILL K+ DFGLA+D +D
Sbjct: 153 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 209
Query: 304 TRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARP 363
+ APE + T +SDV+SFGV+L E+ + A P
Sbjct: 210 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASP 252
Query: 364 HLGDK--RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETL 416
+ G K F R L + + Q C +P RP SE+VE L
Sbjct: 253 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 21/218 (9%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWL 187
L R +LG G FG V+KG W+ P + VA+K L + + +KE L
Sbjct: 14 LKETELRKVKVLGSGAFGTVYKGIWI------PDGENVKIPVAIKVLRENTSPKANKEIL 67
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLF----RKGSLPLPWSIR 243
E + + P + +L+G C+ +L V + MP G L +H+ R GS L
Sbjct: 68 DEAYVMAGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDL----- 121
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVS 303
+ + AKG+++L + +++RD N+L+ + + K++DFGLA+ D + +
Sbjct: 122 LNWCMQIAKGMSYLEDVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHA 178
Query: 304 TRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ A E ++ T +SDV+S+GV + E++T
Sbjct: 179 DGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 130/305 (42%), Gaps = 52/305 (17%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTG--LTVAVKTLNHDGLQGH-KEWLAEVNFLGNLL 197
LGEG FG V K TA G TVAVK L + ++ L+E N L +
Sbjct: 31 LGEGEFGKVVKA------TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN 84
Query: 198 HPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSL--------------------- 236
HP+++KL G C +D LL+ E+ GSL L +
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 237 -PLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAP 295
L + A ++G+ +L AE +++RD NIL+ K+SDFGL++D
Sbjct: 145 RALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 296 EDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
E+ ++ + A E + T++SDV+SFGV+L E++T + N
Sbjct: 202 EEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT----LGGN------ 251
Query: 356 NLVEWARPHLG-DKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
P+ G R + LL S++ +L QC ++P RP +++ +
Sbjct: 252 -------PYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISK 304
Query: 415 TLKPL 419
L+ +
Sbjct: 305 DLEKM 309
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 93/207 (44%), Gaps = 10/207 (4%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWLAEVNFLGNLLHP 199
LG G FG V++G V P + L VAVKTL Q ++L E + H
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 120
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLP-LPWSIRMKIALGAAKGLAF-L 257
N+V+ +G ++ R ++ E M G L++ L P P S+ M L A+ +A
Sbjct: 121 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 180
Query: 258 HEEAEKPVIYRDFKTSNILLDAD---YNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
E I+RD N LL AK+ DFG+A+D M +
Sbjct: 181 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 240
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLT 341
PE M G TSK+D +SFGV+L E+ +
Sbjct: 241 PEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 120/283 (42%), Gaps = 41/283 (14%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-- 186
K+ +F LLG+G FG V V E T G A+K L + + E
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 54
Query: 187 -LAEVNFLGNLLHPNLVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
+ E L N HP L L Y + RL V E+ G L HL R+ +
Sbjct: 55 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 113
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
+ +A L +LH + V+YRD K N++LD D + K++DFGL K+ DG T +
Sbjct: 114 GAEIVSA--LEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT- 167
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHN-LVEWARP 363
GT Y APE + D + GVV+ EM+ GR N +H L E
Sbjct: 168 -FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF----YNQDHERLFELI-- 220
Query: 364 HLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKAR 406
L ++ RF R L P +A L A L +DPK R
Sbjct: 221 -LMEEIRFPRTLSP------------EAKSLLAGLLKKDPKQR 250
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 118/293 (40%), Gaps = 49/293 (16%)
Query: 140 LLGEGGFGCVFKGWVEENGTA--PVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGNL 196
+LG G FG V N TA K G + VAVK L +E L +E+ + L
Sbjct: 52 VLGSGAFGKVM------NATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 105
Query: 197 -LHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL------FRKGSLP------------ 237
H N+V L+G C L++E+ G L N+L F + +
Sbjct: 106 GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 165
Query: 238 ---LPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA 294
L + + A AKG+ FL K ++RD N+L+ K+ DFGLA+D
Sbjct: 166 LNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDI 222
Query: 295 PEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGE 354
D V + APE + G T KSDV+S+G++L E+ S+ N
Sbjct: 223 MSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF----SLGVN----- 273
Query: 355 HNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARP 407
P + FY+L+ + +++ + C + D + RP
Sbjct: 274 ------PYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRP 320
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 109/219 (49%), Gaps = 23/219 (10%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 187
L F+ +LG G FG V+KG W+ E + VA+K L + +KE L
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 69
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----GSLPLPWSI 242
E + ++ +P++ +L+G C+ +L++ + MP G L +++ L W +
Sbjct: 70 DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 128
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
++ AKG+ +L + + +++RD N+L+ + K++DFGLAK + K +
Sbjct: 129 QI------AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 179
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + A E ++ T +SDV+S+GV + E++T
Sbjct: 180 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 120/283 (42%), Gaps = 41/283 (14%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-- 186
K+ +F LLG+G FG V V E T G A+K L + + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 51
Query: 187 -LAEVNFLGNLLHPNLVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
+ E L N HP L L Y + RL V E+ G L HL R+ +
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
+ +A L +LH + V+YRD K N++LD D + K++DFGL K+ DG T +
Sbjct: 111 GAEIVSA--LEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT- 164
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHN-LVEWARP 363
GT Y APE + D + GVV+ EM+ GR N +H L E
Sbjct: 165 -FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF----YNQDHERLFELI-- 217
Query: 364 HLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKAR 406
L ++ RF R L P +A L A L +DPK R
Sbjct: 218 -LMEEIRFPRTLSP------------EAKSLLAGLLKKDPKQR 247
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 22/215 (10%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 189
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 8 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 56
Query: 190 VNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
++ L L HPN+VKL+ +++ LV+EF+ L+ + +P +
Sbjct: 57 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 115
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ T + T
Sbjct: 116 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 170
Query: 310 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
Y APE ++ + ++ D++S G + EM+T R
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 109/219 (49%), Gaps = 23/219 (10%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 187
L F+ +LG G FG V+KG W+ E + VA+K L + +KE L
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 65
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----GSLPLPWSI 242
E + ++ +P++ +L+G C+ +L++ + MP G L +++ L W +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
++ AKG+ +L + + +++RD N+L+ + K++DFGLAK + K +
Sbjct: 125 QI------AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + A E ++ T +SDV+S+GV + E++T
Sbjct: 176 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 93/207 (44%), Gaps = 10/207 (4%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWLAEVNFLGNLLHP 199
LG G FG V++G V P + L VAVKTL Q ++L E + H
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 94
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLP-LPWSIRMKIALGAAKGLAF-L 257
N+V+ +G ++ R ++ E M G L++ L P P S+ M L A+ +A
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 258 HEEAEKPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
E I+RD N LL AK+ DFG+A+D M +
Sbjct: 155 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLT 341
PE M G TSK+D +SFGV+L E+ +
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 93/207 (44%), Gaps = 10/207 (4%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWLAEVNFLGNLLHP 199
LG G FG V++G V P + L VAVKTL Q ++L E + H
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 100
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLP-LPWSIRMKIALGAAKGLAF-L 257
N+V+ +G ++ R ++ E M G L++ L P P S+ M L A+ +A
Sbjct: 101 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 160
Query: 258 HEEAEKPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
E I+RD N LL AK+ DFG+A+D M +
Sbjct: 161 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 220
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLT 341
PE M G TSK+D +SFGV+L E+ +
Sbjct: 221 PEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 106/218 (48%), Gaps = 22/218 (10%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 186
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 49
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ E++ L L HPN+VKL+ +++ LV+EF+ L++ + +P +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSY 108
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 109 LFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 307 MGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 109/219 (49%), Gaps = 23/219 (10%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 187
L F+ +LG G FG V+KG W+ E + VA+K L + +KE L
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 66
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----GSLPLPWSI 242
E + ++ +P++ +L+G C+ +L++ + MP G L +++ L W +
Sbjct: 67 DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 125
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
++ AKG+ +L + + +++RD N+L+ + K++DFGLAK + K +
Sbjct: 126 QI------AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 176
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + A E ++ T +SDV+S+GV + E++T
Sbjct: 177 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 93/207 (44%), Gaps = 10/207 (4%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWLAEVNFLGNLLHP 199
LG G FG V++G V P + L VAVKTL Q ++L E + H
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 110
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLP-LPWSIRMKIALGAAKGLAF-L 257
N+V+ +G ++ R ++ E M G L++ L P P S+ M L A+ +A
Sbjct: 111 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 170
Query: 258 HEEAEKPVIYRDFKTSNILLDAD---YNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
E I+RD N LL AK+ DFG+A+D M +
Sbjct: 171 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 230
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLT 341
PE M G TSK+D +SFGV+L E+ +
Sbjct: 231 PEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 187
L F+ +LG G FG V+KG W+ E + VA+K L + +KE L
Sbjct: 22 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 75
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----GSLPLPWSI 242
E + ++ +P++ +L+G C+ +L+ + MP G L +++ L W +
Sbjct: 76 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 134
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
++ AKG+ +L + + +++RD N+L+ + K++DFGLAK + K +
Sbjct: 135 QI------AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 185
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + A E ++ T +SDV+S+GV + E++T
Sbjct: 186 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 109/219 (49%), Gaps = 23/219 (10%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 187
L F+ +LG G FG V+KG W+ E + VA+K L + +KE L
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 68
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----GSLPLPWSI 242
E + ++ +P++ +L+G C+ +L++ + MP G L +++ L W +
Sbjct: 69 DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 127
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
++ AKG+ +L + + +++RD N+L+ + K++DFGLAK + K +
Sbjct: 128 QI------AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 178
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + A E ++ T +SDV+S+GV + E++T
Sbjct: 179 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 109/219 (49%), Gaps = 23/219 (10%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 187
L F+ +LG G FG V+KG W+ E + VA+K L + +KE L
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 67
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----GSLPLPWSI 242
E + ++ +P++ +L+G C+ +L++ + MP G L +++ L W +
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
++ AKG+ +L + + +++RD N+L+ + K++DFGLAK + K +
Sbjct: 127 QI------AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 177
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + A E ++ T +SDV+S+GV + E++T
Sbjct: 178 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 136/301 (45%), Gaps = 41/301 (13%)
Query: 130 LATRNFRPESL------LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH 183
L ++ PE L +G+G FG VFKG +N T V VA+K ++ + +
Sbjct: 18 LYFQSMDPEELFTKLEKIGKGSFGEVFKGI--DNRTQKV-------VAIKIIDLEEAEDE 68
Query: 184 KEWLA-EVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSI 242
E + E+ L P + K G ++D + ++ E++ GS + L G PL +
Sbjct: 69 IEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPG--PLDETQ 125
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
I KGL +LH E + I+RD K +N+LL KL+DFG+A D +
Sbjct: 126 IATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQIKR 181
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWAR 362
+T V GT + APE + SK+D++S G+ +E+ G + P L+
Sbjct: 182 NTFV-GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN 240
Query: 363 PHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPLQNL 422
P P LEG++ S+ + CL+++P RP E+++ L+N
Sbjct: 241 P-------------PTLEGNY----SKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNA 283
Query: 423 K 423
K
Sbjct: 284 K 284
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 121/287 (42%), Gaps = 39/287 (13%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWL 187
A +F LG+G FG V+ ++ + +A+K L L+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 57
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
EV +L HPN+++L GY + + L+ E+ P G++ L + +
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
L A L++ H K VI+RD K N+LL + K++DFG + AP +T +S
Sbjct: 118 L--ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS---- 168
Query: 308 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
GT Y PE + K D++S GV+ E L G+ + N + +
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS-------- 220
Query: 368 KRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
R+E F ++ A L ++ L +P RP + EV+E
Sbjct: 221 ----------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 30/222 (13%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 186
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 52
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGS----LPLPWSI 242
+ E++ L L HPN+VKL+ +++ LV+EF+ S++ F S +PLP +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLP--L 107
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+
Sbjct: 108 IKSYLFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYX 164
Query: 303 STRVMGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
V T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 165 HEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 131/310 (42%), Gaps = 39/310 (12%)
Query: 108 PKFSEELKVASQLRKFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTG 167
P+ + E ++AS+ + + A +F LG+G FG V+ ++ +
Sbjct: 9 PENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQ---------SK 59
Query: 168 LTVAVKTLNHDGLQG---HKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRG 224
+A+K L L+ + EV +L HPN+++L GY + + L+ E+ P G
Sbjct: 60 FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 119
Query: 225 SLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAK 284
++ L + + L A L++ H K VI+RD K N+LL + K
Sbjct: 120 TVYRELQKLSKFDEQRTATYITEL--ANALSYCHS---KRVIHRDIKPENLLLGSAGELK 174
Query: 285 LSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRR 344
++DFG + AP + T + GT Y PE + K D++S GV+ E L G+
Sbjct: 175 IADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 230
Query: 345 SMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPK 404
+ N + + R+E F ++ A L ++ L +P
Sbjct: 231 PFEANTYQETYKRIS------------------RVEFTFPDFVTEGARDLISRLLKHNPS 272
Query: 405 ARPRMSEVVE 414
RP + EV+E
Sbjct: 273 QRPMLREVLE 282
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 117/284 (41%), Gaps = 39/284 (13%)
Query: 127 DLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 186
D K+ +F LLG+G FG V V E T G A+K L + + E
Sbjct: 4 DPKVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEV 54
Query: 187 ---LAEVNFLGNLLHPNLVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSI 242
+ E L N HP L L Y + RL V E+ G L HL R+ +
Sbjct: 55 AHTVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR 113
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
+ +A L +LH + V+YRD K N++LD D + K++DFGL K+ DG T
Sbjct: 114 FYGAEIVSA--LEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT-- 166
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWAR 362
GT Y APE + D + GVV+ EM+ GR L+
Sbjct: 167 MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI---- 222
Query: 363 PHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKAR 406
L ++ RF R L P +A L A L +DPK R
Sbjct: 223 --LMEEIRFPRTLSP------------EAKSLLAGLLKKDPKQR 252
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 22/215 (10%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 189
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 190 VNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
++ L L HPN+VKL+ +++ LV+EF+ L+ + +P +
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ T + T
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 166
Query: 310 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
Y APE ++ + ++ D++S G + EM+T R
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 119/283 (42%), Gaps = 41/283 (14%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-- 186
K+ +F LLG+G FG V V E T G A+K L + + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 51
Query: 187 -LAEVNFLGNLLHPNLVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
+ E L N HP L L Y + RL V E+ G L HL R+ +
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
+ +A L +LH + V+YRD K N++LD D + K++DFGL K+ DG T
Sbjct: 111 GAEIVSA--LEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MK 163
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHN-LVEWARP 363
GT Y APE + D + GVV+ EM+ GR N +H L E
Sbjct: 164 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF----YNQDHERLFELI-- 217
Query: 364 HLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKAR 406
L ++ RF R L P +A L A L +DPK R
Sbjct: 218 -LMEEIRFPRTLSP------------EAKSLLAGLLKKDPKQR 247
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 22/215 (10%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 189
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 190 VNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
++ L L HPN+VKL+ +++ LV+EF+ L+ + +P +
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ T + T
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 165
Query: 310 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
Y APE ++ + ++ D++S G + EM+T R
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 22/215 (10%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 189
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 190 VNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
++ L L HPN+VKL+ +++ LV+EF+ L+ + +P +
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ T + T
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 165
Query: 310 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
Y APE ++ + ++ D++S G + EM+T R
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 120/283 (42%), Gaps = 41/283 (14%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-- 186
K+ +F LLG+G FG V V E T G A+K L + + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 51
Query: 187 -LAEVNFLGNLLHPNLVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
+ E L N HP L L Y + RL V E+ G L HL R+ +
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
+ +A L +LH + V+YRD K N++LD D + K++DFGL K+ DG T +
Sbjct: 111 GAEIVSA--LEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT- 164
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHN-LVEWARP 363
GT Y APE + D + GVV+ EM+ GR N +H L E
Sbjct: 165 -FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF----YNQDHERLFELI-- 217
Query: 364 HLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKAR 406
L ++ RF R L P +A L A L +DPK R
Sbjct: 218 -LMEEIRFPRTLSP------------EAKSLLAGLLKKDPKQR 247
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 119/283 (42%), Gaps = 41/283 (14%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-- 186
K+ +F LLG+G FG V V E T G A+K L + + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 51
Query: 187 -LAEVNFLGNLLHPNLVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
+ E L N HP L L Y + RL V E+ G L HL R+ +
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
+ +A L +LH + V+YRD K N++LD D + K++DFGL K+ DG T
Sbjct: 111 GAEIVSA--LEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MK 163
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHN-LVEWARP 363
GT Y APE + D + GVV+ EM+ GR N +H L E
Sbjct: 164 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF----YNQDHERLFELI-- 217
Query: 364 HLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKAR 406
L ++ RF R L P +A L A L +DPK R
Sbjct: 218 -LMEEIRFPRTLSP------------EAKSLLAGLLKKDPKQR 247
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 187
L F+ +LG G FG V+KG W+ E + VA+K L + +KE L
Sbjct: 18 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 71
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----GSLPLPWSI 242
E + ++ +P++ +L+G C+ +L+ + MP G L +++ L W +
Sbjct: 72 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 130
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
++ AKG+ +L + + +++RD N+L+ + K++DFGLAK + K +
Sbjct: 131 QI------AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 181
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + A E ++ T +SDV+S+GV + E++T
Sbjct: 182 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 93/207 (44%), Gaps = 10/207 (4%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWLAEVNFLGNLLHP 199
LG G FG V++G V P + L VAVKTL Q ++L E + H
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 93
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLP-LPWSIRMKIALGAAKGLAF-L 257
N+V+ +G ++ R ++ E M G L++ L P P S+ M L A+ +A
Sbjct: 94 NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 258 HEEAEKPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
E I+RD N LL AK+ DFG+A+D M +
Sbjct: 154 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLT 341
PE M G TSK+D +SFGV+L E+ +
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 106/218 (48%), Gaps = 22/218 (10%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 186
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 50
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ E++ L L HPN+VKL+ +++ LV+EF+ L+ + +P +
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 109
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ T
Sbjct: 110 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THE 164
Query: 307 MGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
+ T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 109/222 (49%), Gaps = 30/222 (13%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 186
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 50
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGS----LPLPWSI 242
+ E++ L L HPN+VKL+ +++ LV+EF+ S++ F S +PLP
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIK 107
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
L +GLAF H V++RD K N+L++ + KL+DFGLA+ +T+
Sbjct: 108 SYLFQL--LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYX 162
Query: 303 STRVMGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
V T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 163 HEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 93/207 (44%), Gaps = 10/207 (4%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWLAEVNFLGNLLHP 199
LG G FG V++G V P + L VAVKTL Q ++L E + H
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 94
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLP-LPWSIRMKIALGAAKGLAF-L 257
N+V+ +G ++ R ++ E M G L++ L P P S+ M L A+ +A
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 258 HEEAEKPVIYRDFKTSNILLDAD---YNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
E I+RD N LL AK+ DFG+A+D M +
Sbjct: 155 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMP 214
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLT 341
PE M G TSK+D +SFGV+L E+ +
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 187
L F+ +LG G FG V+KG W+ E + VA+K L + +KE L
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 68
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----GSLPLPWSI 242
E + ++ +P++ +L+G C+ +L+ + MP G L +++ L W +
Sbjct: 69 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 127
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
++ AKG+ +L + + +++RD N+L+ + K++DFGLAK + K +
Sbjct: 128 QI------AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 178
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + A E ++ T +SDV+S+GV + E++T
Sbjct: 179 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 93/207 (44%), Gaps = 10/207 (4%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWLAEVNFLGNLLHP 199
LG G FG V++G V P + L VAVKTL Q ++L E + H
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 93
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLP-LPWSIRMKIALGAAKGLAF-L 257
N+V+ +G ++ R ++ E M G L++ L P P S+ M L A+ +A
Sbjct: 94 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 258 HEEAEKPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
E I+RD N LL AK+ DFG+A+D M +
Sbjct: 154 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLT 341
PE M G TSK+D +SFGV+L E+ +
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 93/207 (44%), Gaps = 10/207 (4%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWLAEVNFLGNLLHP 199
LG G FG V++G V P + L VAVKTL Q ++L E + H
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 85
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLP-LPWSIRMKIALGAAKGLAF-L 257
N+V+ +G ++ R ++ E M G L++ L P P S+ M L A+ +A
Sbjct: 86 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 145
Query: 258 HEEAEKPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
E I+RD N LL AK+ DFG+A+D M +
Sbjct: 146 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 205
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLT 341
PE M G TSK+D +SFGV+L E+ +
Sbjct: 206 PEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 109/219 (49%), Gaps = 23/219 (10%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 187
L F+ +LG G FG V+KG W+ E + VA+K L + +KE L
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 66
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----GSLPLPWSI 242
E + ++ +P++ +L+G C+ +L++ + MP G L +++ L W +
Sbjct: 67 DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNWCV 125
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
++ AKG+ +L + + +++RD N+L+ + K++DFGLAK + K +
Sbjct: 126 QI------AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 176
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + A E ++ T +SDV+S+GV + E++T
Sbjct: 177 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 22/215 (10%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 189
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 190 VNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
++ L L HPN+VKL+ +++ LV+EF+ L+ + +P +
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ T + T
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 166
Query: 310 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
Y APE ++ + ++ D++S G + EM+T R
Sbjct: 167 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 127/302 (42%), Gaps = 46/302 (15%)
Query: 116 VASQLRKFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTL 175
+ S+ R++ D ++ RP LG+G FG V+ ++ + +A+K L
Sbjct: 3 MESKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVL 46
Query: 176 NHDGLQG---HKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFR 232
L+ + EV +L HPN+++L GY + + L+ E+ PRG + L +
Sbjct: 47 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQK 106
Query: 233 KGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAK 292
+ L A L++ H K VI+RD K N+LL + K++DFG +
Sbjct: 107 LSKFDEQRTATYITEL--ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV 161
Query: 293 DAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPN 352
AP + + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 162 HAPSSRR----XXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
Query: 353 GEHNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
+ + R+E F ++ A L ++ L +P RP + EV
Sbjct: 218 ETYKRIS------------------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 259
Query: 413 VE 414
+E
Sbjct: 260 LE 261
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 106/218 (48%), Gaps = 22/218 (10%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 186
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 52
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ E++ L L HPN+VKL+ +++ LV+EF+ L++ + +P +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSY 111
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 112 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 307 MGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 22/218 (10%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 186
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 49
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ E++ L L HPN+VKL+ +++ LV+EF+ L+ + +P +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 108
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 109 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 307 MGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 187
L F+ +LG G FG V+KG W+ E + VA+K L + +KE L
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 68
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----GSLPLPWSI 242
E + ++ +P++ +L+G C+ +L+ + MP G L +++ L W +
Sbjct: 69 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 127
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
++ AKG+ +L + + +++RD N+L+ + K++DFGLAK + K +
Sbjct: 128 QI------AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 178
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + A E ++ T +SDV+S+GV + E++T
Sbjct: 179 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 187
L F+ +LG G FG V+KG W+ E + VA+K L + +KE L
Sbjct: 19 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 72
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----GSLPLPWSI 242
E + ++ +P++ +L+G C+ +L+ + MP G L +++ L W +
Sbjct: 73 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 131
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
++ AKG+ +L + + +++RD N+L+ + K++DFGLAK + K +
Sbjct: 132 QI------AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 182
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + A E ++ T +SDV+S+GV + E++T
Sbjct: 183 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 127/300 (42%), Gaps = 46/300 (15%)
Query: 118 SQLRKFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH 177
S+ R++ D ++ RP LG+G FG V+ ++ + +A+K L
Sbjct: 5 SKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFK 48
Query: 178 DGLQG---HKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKG 234
L+ + EV +L HPN+++L GY + + L+ E+ P G++ L +
Sbjct: 49 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 108
Query: 235 SLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA 294
+ L A L++ H K VI+RD K N+LL + K++DFG + A
Sbjct: 109 KFDEQRTATYITEL--ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 295 PEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGE 354
P + T + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 164 PSSRR----TTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Query: 355 HNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
+ + R+E F ++ A L ++ L +P RP + EV+E
Sbjct: 220 YKRIS------------------RVEFTFPDFVTEGARDLISRLLKHNPSQRPXLREVLE 261
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 93/207 (44%), Gaps = 10/207 (4%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWLAEVNFLGNLLHP 199
LG G FG V++G V P + L VAVKTL Q ++L E + H
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 108
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLP-LPWSIRMKIALGAAKGLAF-L 257
N+V+ +G ++ R ++ E M G L++ L P P S+ M L A+ +A
Sbjct: 109 NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 258 HEEAEKPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
E I+RD N LL AK+ DFG+A+D M +
Sbjct: 169 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLT 341
PE M G TSK+D +SFGV+L E+ +
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 22/215 (10%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 189
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 190 VNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
++ L L HPN+VKL+ +++ LV+EF+ L+ + +P +
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ T + T
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 166
Query: 310 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
Y APE ++ + ++ D++S G + EM+T R
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 187
L F+ +LG G FG V+KG W+ E + VA+K L + +KE L
Sbjct: 37 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 90
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----GSLPLPWSI 242
E + ++ +P++ +L+G C+ +L+ + MP G L +++ L W +
Sbjct: 91 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 149
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
++ AKG+ +L + + +++RD N+L+ + K++DFGLAK + K +
Sbjct: 150 QI------AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 200
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + A E ++ T +SDV+S+GV + E++T
Sbjct: 201 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 187
L F+ +LG G FG V+KG W+ E + VA+K L + +KE L
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 65
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----GSLPLPWSI 242
E + ++ +P++ +L+G C+ +L+ + MP G L +++ L W +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
++ AKG+ +L + + +++RD N+L+ + K++DFGLAK + K +
Sbjct: 125 QI------AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + A E ++ T +SDV+S+GV + E++T
Sbjct: 176 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 187
L F+ +LG G FG V+KG W+ E + VA+K L + +KE L
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 68
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----GSLPLPWSI 242
E + ++ +P++ +L+G C+ +L+ + MP G L +++ L W +
Sbjct: 69 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 127
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
++ AKG+ +L + + +++RD N+L+ + K++DFGLAK + K +
Sbjct: 128 QI------AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 178
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + A E ++ T +SDV+S+GV + E++T
Sbjct: 179 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 187
L F+ +LG G FG V+KG W+ E + VA+K L + +KE L
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 67
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----GSLPLPWSI 242
E + ++ +P++ +L+G C+ +L+ + MP G L +++ L W +
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
++ AKG+ +L + + +++RD N+L+ + K++DFGLAK + K +
Sbjct: 127 QI------AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 177
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + A E ++ T +SDV+S+GV + E++T
Sbjct: 178 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 22/215 (10%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 189
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 11 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 59
Query: 190 VNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
++ L L HPN+VKL+ +++ LV+EF+ L+ + +P +
Sbjct: 60 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 118
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ T + T
Sbjct: 119 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 173
Query: 310 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
Y APE ++ + ++ D++S G + EM+T R
Sbjct: 174 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 187
L F+ +LG G FG V+KG W+ E + VA+K L + +KE L
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 65
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----GSLPLPWSI 242
E + ++ +P++ +L+G C+ +L+ + MP G L +++ L W +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
++ AKG+ +L + + +++RD N+L+ + K++DFGLAK + K +
Sbjct: 125 QI------AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + A E ++ T +SDV+S+GV + E++T
Sbjct: 176 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 22/218 (10%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 186
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 51
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ E++ L L HPN+VKL+ +++ LV+EF+ L+ + +P +
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 110
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 111 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 307 MGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 22/218 (10%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 186
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 52
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ E++ L L HPN+VKL+ +++ LV+EF+ L+ + +P +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 111
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 112 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 307 MGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 22/218 (10%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 186
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 51
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ E++ L L HPN+VKL+ +++ LV+EF+ L+ + +P +
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 110
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 111 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 307 MGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 106/218 (48%), Gaps = 22/218 (10%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 186
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 51
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ E++ L L HPN+VKL+ +++ LV+EF+ L++ + +P +
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSY 110
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 111 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 307 MGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 22/218 (10%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 186
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 49
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ E++ L L HPN+VKL+ +++ LV+EF+ L+ + +P +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 108
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 109 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 307 MGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 109/242 (45%), Gaps = 24/242 (9%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN---HDGLQGHKE 185
K+ ++ LG GG V ++ E+ +K VA+K + + + K
Sbjct: 7 KIINERYKIVDKLGGGGMSTV---YLAEDTILNIK------VAIKAIFIPPREKEETLKR 57
Query: 186 WLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMK 245
+ EV+ L H N+V ++ EDD LV E++ +L ++ G L + +I
Sbjct: 58 FEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFT 117
Query: 246 IALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTR 305
+ G+ H+ +++RD K NIL+D++ K+ DFG+AK E T +
Sbjct: 118 NQI--LDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNH 171
Query: 306 VMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHL 365
V+GT Y +PE +D+YS G+VL EML G NGE V A H+
Sbjct: 172 VLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPF-----NGE-TAVSIAIKHI 225
Query: 366 GD 367
D
Sbjct: 226 QD 227
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 22/218 (10%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 186
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 51
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ E++ L L HPN+VKL+ +++ LV+EF+ L+ + +P +
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 110
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 111 LFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
Query: 307 MGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 22/215 (10%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 189
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 11 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 59
Query: 190 VNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
++ L L HPN+VKL+ +++ LV+EF+ L+ + +P +
Sbjct: 60 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 118
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ T + T
Sbjct: 119 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 173
Query: 310 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
Y APE ++ + ++ D++S G + EM+T R
Sbjct: 174 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 22/218 (10%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 186
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 49
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ E++ L L HPN+VKL+ +++ LV+EF+ L+ + +P +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 108
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 109 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 307 MGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 22/218 (10%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 186
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 52
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ E++ L L HPN+VKL+ +++ LV+EF+ L+ + +P +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSY 111
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 112 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 307 MGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 123/304 (40%), Gaps = 67/304 (22%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 193
+F+ L+G GGFG VFK +G T +K + ++ + +E V L
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGK---------TYVIKRVKYNNEKAERE----VKAL 58
Query: 194 GNLLHPNLVKLVG------YCIEDDQR----------LLVYEFMPRGSLENHLFRKGSLP 237
L H N+V G Y E + + EF +G+LE + ++
Sbjct: 59 AKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK 118
Query: 238 LPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPED 297
L + +++ KG+ ++H K +I RD K SNI L K+ DFGL D
Sbjct: 119 LDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND 175
Query: 298 GKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL 357
GK R GT Y +PE + + + D+Y+ G++L E+L
Sbjct: 176 GK---RXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL----------------- 215
Query: 358 VEWARPHLGD-----KRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
H+ D + F L D + F +K L + LS+ P+ RP SE+
Sbjct: 216 ------HVCDTAFETSKFFTDLRDGIISDIF----DKKEKTLLQKLLSKKPEDRPNTSEI 265
Query: 413 VETL 416
+ TL
Sbjct: 266 LRTL 269
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 22/218 (10%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 186
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 52
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ E++ L L HPN+VKL+ +++ LV+EF+ L+ + +P +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 111
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 112 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 307 MGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 126/301 (41%), Gaps = 43/301 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNL-LH 198
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL-----------FRKGSLP---LPWSIRM 244
N++ L+G C +D ++ + +G+L +L + +P + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
A+G+ +L A + I+RD N+L+ + K++DFGLA+D +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPH 364
+ APE + T +SDV+SFGV++ E+ T S P E
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---------- 267
Query: 365 LGDKRRFYRLLDPRLEGHFSIKGSQKATQLAA---QCLSRDPKARPRMSEVVETLKPLQN 421
++LL EGH K + +L C P RP ++VE L +
Sbjct: 268 ------LFKLLK---EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 422 L 422
L
Sbjct: 319 L 319
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 22/218 (10%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 186
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 50
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ E++ L L HPN+VKL+ +++ LV+EF+ L+ + +P +
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 109
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 110 LFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 307 MGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 93/207 (44%), Gaps = 10/207 (4%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGNLLHP 199
LG G FG V++G V P + L VAVKTL Q ++L E + H
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQ 108
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLP-LPWSIRMKIALGAAKGLAF-L 257
N+V+ +G ++ R ++ E M G L++ L P P S+ M L A+ +A
Sbjct: 109 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 258 HEEAEKPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
E I+RD N LL AK+ DFG+A+D M +
Sbjct: 169 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLT 341
PE M G TSK+D +SFGV+L E+ +
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 187
L F+ +LG G FG V+KG W+ E + VA+K L + +KE L
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 65
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----GSLPLPWSI 242
E + ++ +P++ +L+G C+ +L+ + MP G L +++ L W +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNWCV 124
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
++ AKG+ +L + + +++RD N+L+ + K++DFGLAK + K +
Sbjct: 125 QI------AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + A E ++ T +SDV+S+GV + E++T
Sbjct: 176 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 22/215 (10%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 189
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 190 VNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
++ L L HPN+VKL+ +++ LV+EF+ L+ + +P +
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V T
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 165
Query: 310 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
Y APE ++ + ++ D++S G + EM+T R
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 22/218 (10%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 186
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 53
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ E++ L L HPN+VKL+ +++ LV+EF+ L+ + +P +
Sbjct: 54 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 112
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 113 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 169
Query: 307 MGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 170 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 22/218 (10%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 186
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 50
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ E++ L L HPN+VKL+ +++ LV+EF+ L+ + +P +
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 109
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 110 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 307 MGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 22/218 (10%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 186
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 49
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ E++ L L HPN+VKL+ +++ LV+EF+ L+ + +P +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 108
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 109 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
Query: 307 MGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 116/282 (41%), Gaps = 39/282 (13%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-- 186
K+ +F LLG+G FG V V E T G A+K L + + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 51
Query: 187 -LAEVNFLGNLLHPNLVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
+ E L N HP L L Y + RL V E+ G L HL R+ +
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
+ +A L +LH + V+YRD K N++LD D + K++DFGL K+ DG T
Sbjct: 111 GAEIVSA--LEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MK 163
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPH 364
GT Y APE + D + GVV+ EM+ GR L+
Sbjct: 164 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI------ 217
Query: 365 LGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKAR 406
L ++ RF R L P +A L A L +DPK R
Sbjct: 218 LMEEIRFPRTLSP------------EAKSLLAGLLKKDPKQR 247
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 22/215 (10%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 189
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 190 VNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
++ L L HPN+VKL+ +++ LV+EF+ L+ + +P +
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V T
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 165
Query: 310 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
Y APE ++ + ++ D++S G + EM+T R
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 187
L F+ +LG G FG V+KG W+ E + VA+K L + +KE L
Sbjct: 6 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 59
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----GSLPLPWSI 242
E + ++ +P++ +L+G C+ +L+ + MP G L +++ L W +
Sbjct: 60 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 118
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
++ AKG+ +L + + +++RD N+L+ + K++DFGLAK + K +
Sbjct: 119 QI------AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 169
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + A E ++ T +SDV+S+GV + E++T
Sbjct: 170 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 22/215 (10%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 189
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 5 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 53
Query: 190 VNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
++ L L HPN+VKL+ +++ LV+EF+ L+ + +P +
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V T
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 167
Query: 310 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
Y APE ++ + ++ D++S G + EM+T R
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 127/300 (42%), Gaps = 46/300 (15%)
Query: 118 SQLRKFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH 177
S+ R++ D ++ RP LG+G FG V+ ++ + +A+K L
Sbjct: 17 SKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFK 60
Query: 178 DGLQG---HKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKG 234
L+ + EV +L HPN+++L GY + + L+ E+ P G++ L +
Sbjct: 61 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 120
Query: 235 SLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA 294
+ L A L++ H K VI+RD K N+LL + K++DFG + A
Sbjct: 121 KFDEQRTATYITEL--ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHA 175
Query: 295 PEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGE 354
P + T + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 176 PSSRR----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 231
Query: 355 HNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
+ + R+E F ++ A L ++ L +P RP + EV+E
Sbjct: 232 YKRIS------------------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 273
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 127/300 (42%), Gaps = 46/300 (15%)
Query: 118 SQLRKFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH 177
S+ R++ D ++ RP LG+G FG V+ ++ + +A+K L
Sbjct: 5 SKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFK 48
Query: 178 DGLQG---HKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKG 234
L+ + EV +L HPN+++L GY + + L+ E+ P G++ L +
Sbjct: 49 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 108
Query: 235 SLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA 294
+ L A L++ H K VI+RD K N+LL + K++DFG + A
Sbjct: 109 KFDEQRTATYITEL--ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 295 PEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGE 354
P +T + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 164 PSSRRTDLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Query: 355 HNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
+ + R+E F ++ A L ++ L +P RP + EV+E
Sbjct: 220 YKRIS------------------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 127/300 (42%), Gaps = 46/300 (15%)
Query: 118 SQLRKFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH 177
S+ R++ D ++ RP LG+G FG V+ ++ + +A+K L
Sbjct: 1 SKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFK 44
Query: 178 DGLQG---HKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKG 234
L+ + EV +L HPN+++L GY + + L+ E+ P G++ L +
Sbjct: 45 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 104
Query: 235 SLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA 294
+ L A L++ H K VI+RD K N+LL + K++DFG + A
Sbjct: 105 KFDEQRTATYITEL--ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHA 159
Query: 295 PEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGE 354
P +T + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 160 PSSRRTDLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 215
Query: 355 HNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
+ + R+E F ++ A L ++ L +P RP + EV+E
Sbjct: 216 YKRIS------------------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 128/302 (42%), Gaps = 46/302 (15%)
Query: 116 VASQLRKFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTL 175
+ S+ R++ D ++ RP LG+G FG V+ ++ + +A+K L
Sbjct: 3 MESKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVL 46
Query: 176 NHDGLQG---HKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFR 232
L+ + EV +L HPN+++L GY + + L+ E+ P G++ L +
Sbjct: 47 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 106
Query: 233 KGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAK 292
+ L A L++ H K VI+RD K N+LL + K++DFG +
Sbjct: 107 LSKFDEQRTATYITEL--ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV 161
Query: 293 DAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPN 352
AP + T + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 162 HAPSSRR----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
Query: 353 GEHNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
+ + R+E F ++ A L ++ L +P RP + EV
Sbjct: 218 ETYKRIS------------------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 259
Query: 413 VE 414
+E
Sbjct: 260 LE 261
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 120/287 (41%), Gaps = 39/287 (13%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWL 187
A +F LG+G FG V+ ++ + +A+K L L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 56
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
EV +L HPN+++L GY + + L+ E+ P G++ L + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
L A L++ H K VI+RD K N+LL + K++DFG + AP +T +
Sbjct: 117 L--ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELC---- 167
Query: 308 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
GT Y PE + K D++S GV+ E L G+ + N + +
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS-------- 219
Query: 368 KRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
R+E F ++ A L ++ L +P RP + EV+E
Sbjct: 220 ----------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 128/302 (42%), Gaps = 46/302 (15%)
Query: 116 VASQLRKFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTL 175
+ S+ R++ D ++ RP LG+G FG V+ ++ + +A+K L
Sbjct: 1 MESKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVL 44
Query: 176 NHDGLQG---HKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFR 232
L+ + EV +L HPN+++L GY + + L+ E+ P G++ L +
Sbjct: 45 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 104
Query: 233 KGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAK 292
+ L A L++ H K VI+RD K N+LL + K++DFG +
Sbjct: 105 LSKFDEQRTATYITEL--ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV 159
Query: 293 DAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPN 352
AP + T + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 160 HAPSSRR----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
Query: 353 GEHNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
+ + R+E F ++ A L ++ L +P RP + EV
Sbjct: 216 ETYKRIS------------------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 257
Query: 413 VE 414
+E
Sbjct: 258 LE 259
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 122/291 (41%), Gaps = 48/291 (16%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGNLLHP 199
+G G FG VF G + + T VAVK+ K ++L E L HP
Sbjct: 122 IGRGNFGEVFSGRLRADNT---------LVAVKSCRETLPPDLKAKFLQEARILKQYSHP 172
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL----GAAKGLA 255
N+V+L+G C + +V E + G L +G+ +R+K L AA G+
Sbjct: 173 NIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA-----RLRVKTLLQMVGDAAAGME 227
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT-YGYAA 314
+L K I+RD N L+ K+SDFG++++ DG S + + A
Sbjct: 228 YLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEA-DGVXAASGGLRQVPVKWTA 283
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFY-- 372
PE + G +S+SDV+SFG++L E + S N N + R F
Sbjct: 284 PEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ-------------TREFVEK 330
Query: 373 --RLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPLQN 421
RL P L +L QC + +P RP S + + L+ ++
Sbjct: 331 GGRLPCPEL-------CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 21/219 (9%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAE 189
++ F+ LG G + V+KG + TG+ VA+K + D +G + E
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKG---------LNKTTGVYVALKEVKLDSEEGTPSTAIRE 53
Query: 190 VNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK--GSLP--LPWSIRMK 245
++ + L H N+V+L +++ LV+EFM L+ ++ + G+ P L ++
Sbjct: 54 ISLMKELKHENIVRLYDVIHTENKLTLVFEFM-DNDLKKYMDSRTVGNTPRGLELNLVKY 112
Query: 246 IALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTR 305
+GLAF HE +++RD K N+L++ KL DFGLA+ T S
Sbjct: 113 FQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEV 169
Query: 306 VMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGR 343
V T Y AP+ +M S S D++S G +L EM+TG+
Sbjct: 170 V--TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 20/204 (9%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG+G FG V+K +E TG A K + + ++++ E+ L HP
Sbjct: 27 LGDGAFGKVYKAKNKE---------TGALAAAKVIETKSEEELEDYIVEIEILATCDHPY 77
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
+VKL+G D + ++ EF P G+++ + I++ + + L FLH
Sbjct: 78 IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-VCRQMLEALNFLH-- 134
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMT 320
K +I+RD K N+L+ + + +L+DFG++ A +GT + APE VM
Sbjct: 135 -SKRIIHRDLKAGNVLMTLEGDIRLADFGVS--AKNLKTLQKRDSFIGTPYWMAPEVVMC 191
Query: 321 GHLTS-----KSDVYSFGVVLLEM 339
+ K+D++S G+ L+EM
Sbjct: 192 ETMKDTPYDYKADIWSLGITLIEM 215
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 122/291 (41%), Gaps = 48/291 (16%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGNLLHP 199
+G G FG VF G + + T VAVK+ K ++L E L HP
Sbjct: 122 IGRGNFGEVFSGRLRADNT---------LVAVKSCRETLPPDLKAKFLQEARILKQYSHP 172
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL----GAAKGLA 255
N+V+L+G C + +V E + G L +G+ +R+K L AA G+
Sbjct: 173 NIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA-----RLRVKTLLQMVGDAAAGME 227
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT-YGYAA 314
+L K I+RD N L+ K+SDFG++++ DG S + + A
Sbjct: 228 YLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEA-DGVYAASGGLRQVPVKWTA 283
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFY-- 372
PE + G +S+SDV+SFG++L E + S N N + R F
Sbjct: 284 PEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ-------------TREFVEK 330
Query: 373 --RLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPLQN 421
RL P L +L QC + +P RP S + + L+ ++
Sbjct: 331 GGRLPCPEL-------CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 22/215 (10%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 189
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 190 VNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
++ L L HPN+VKL+ +++ LV+EF+ L+ + +P +
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+GL+F H V++RD K N+L++ + KL+DFGLA+ +T+ T + T
Sbjct: 112 LLQGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 166
Query: 310 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
Y APE ++ + ++ D++S G + EM+T R
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 120/287 (41%), Gaps = 39/287 (13%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWL 187
A +F LG+G FG V+ ++ + +A+K L L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 56
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
EV +L HPN+++L GY + + L+ E+ P G++ L + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
L A L++ H K VI+RD K N+LL + K++DFG + AP +T +
Sbjct: 117 L--ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC---- 167
Query: 308 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
GT Y PE + K D++S GV+ E L G+ + N + +
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS-------- 219
Query: 368 KRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
R+E F ++ A L ++ L +P RP + EV+E
Sbjct: 220 ----------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 120/287 (41%), Gaps = 39/287 (13%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWL 187
A +F LG+G FG V+ ++ + +A+K L L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 56
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
EV +L HPN+++L GY + + L+ E+ P G++ L + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
L A L++ H K VI+RD K N+LL + K++DFG + AP + T +
Sbjct: 117 L--ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLC 167
Query: 308 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
GT Y PE + K D++S GV+ E L G+ + N + +
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS-------- 219
Query: 368 KRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
R+E F ++ A L ++ L +P RP + EV+E
Sbjct: 220 ----------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 126/301 (41%), Gaps = 43/301 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNL-LH 198
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL-----------FRKGSLP---LPWSIRM 244
N++ L+G C +D ++ + +G+L +L + +P + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
A+G+ +L A + I+RD N+L+ + K++DFGLA+D +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPH 364
+ APE + T +SDV+SFGV++ E+ T S P E
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---------- 267
Query: 365 LGDKRRFYRLLDPRLEGHFSIKGSQKATQLAA---QCLSRDPKARPRMSEVVETLKPLQN 421
++LL EGH K + +L C P RP ++VE L +
Sbjct: 268 ------LFKLLK---EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
Query: 422 L 422
L
Sbjct: 319 L 319
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 128/302 (42%), Gaps = 46/302 (15%)
Query: 116 VASQLRKFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTL 175
+ S+ R++ D ++ RP LG+G FG V+ ++ + +A+K L
Sbjct: 1 MESKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVL 44
Query: 176 NHDGLQG---HKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFR 232
L+ + EV +L HPN+++L GY + + L+ E+ P G++ L +
Sbjct: 45 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 104
Query: 233 KGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAK 292
+ L A L++ H K VI+RD K N+LL + K++DFG +
Sbjct: 105 LSKFDEQRTATYITEL--ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV 159
Query: 293 DAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPN 352
AP +T + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 160 HAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
Query: 353 GEHNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
+ + R+E F ++ A L ++ L +P RP + EV
Sbjct: 216 ETYKRIS------------------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 257
Query: 413 VE 414
+E
Sbjct: 258 LE 259
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 120/287 (41%), Gaps = 39/287 (13%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWL 187
A +F LG+G FG V+ ++ + +A+K L L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 56
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
EV +L HPN+++L GY + + L+ E+ P G++ L + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
L A L++ H K VI+RD K N+LL + K++DFG + AP +T +
Sbjct: 117 L--ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC---- 167
Query: 308 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
GT Y PE + K D++S GV+ E L G+ + N + +
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS-------- 219
Query: 368 KRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
R+E F ++ A L ++ L +P RP + EV+E
Sbjct: 220 ----------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 20/204 (9%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG+G FG V+K +E TG A K + + ++++ E+ L HP
Sbjct: 19 LGDGAFGKVYKAKNKE---------TGALAAAKVIETKSEEELEDYIVEIEILATCDHPY 69
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
+VKL+G D + ++ EF P G+++ + I++ + + L FLH
Sbjct: 70 IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-VCRQMLEALNFLH-- 126
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMT 320
K +I+RD K N+L+ + + +L+DFG++ A +GT + APE VM
Sbjct: 127 -SKRIIHRDLKAGNVLMTLEGDIRLADFGVS--AKNLKTLQKRDSFIGTPYWMAPEVVMC 183
Query: 321 GHLTS-----KSDVYSFGVVLLEM 339
+ K+D++S G+ L+EM
Sbjct: 184 ETMKDTPYDYKADIWSLGITLIEM 207
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 120/287 (41%), Gaps = 39/287 (13%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWL 187
A +F LG+G FG V+ ++ + +A+K L L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 56
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
EV +L HPN+++L GY + + L+ E+ P G++ L + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
L A L++ H K VI+RD K N+LL + K++DFG + AP +T +
Sbjct: 117 L--ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLC---- 167
Query: 308 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
GT Y PE + K D++S GV+ E L G+ + N + +
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS-------- 219
Query: 368 KRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
R+E F ++ A L ++ L +P RP + EV+E
Sbjct: 220 ----------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 105/214 (49%), Gaps = 21/214 (9%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTV----AVKTLNHDGLQGHKEWLAE 189
F +LG+G FG VF V++ + + + V +K + + ++ L E
Sbjct: 25 QFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE 82
Query: 190 VNFLGNLLHPNLVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL 248
VN HP +VKL Y + + +L L+ +F+ G L L K + ++ +A
Sbjct: 83 VN------HPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLA- 133
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
A L LH +IYRD K NILLD + + KL+DFGL+K++ + K S G
Sbjct: 134 ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCG 188
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
T Y APE V T +D +SFGV++ EMLTG
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 131/291 (45%), Gaps = 44/291 (15%)
Query: 141 LGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
+G G FG V+KG W +G VK + V + Q + EV L H
Sbjct: 44 IGSGSFGTVYKGKW---HGDVAVK-----ILKVVDPTPEQFQAFRN---EVAVLRKTRHV 92
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
N++ +GY +D+ +V ++ SL HL + + + + + IA A+G+ +LH
Sbjct: 93 NILLFMGYMTKDN-LAIVTQWCEGSSLYKHLHVQETKFQMFQL-IDIARQTAQGMDYLHA 150
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
K +I+RD K++NI L K+ DFGLA + + G+ + APE +
Sbjct: 151 ---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIR 207
Query: 320 TGH---LTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLL- 375
+ +SDVYS+G+VL E++TG E H+ ++ + ++
Sbjct: 208 MQDNNPFSFQSDVYSYGIVLYELMTG----------------ELPYSHINNRDQIIFMVG 251
Query: 376 ----DPRLEGHFSIKGSQKATQ-LAAQCLSRDPKARPRMSEVVETLKPLQN 421
P L + K KA + L A C+ + + RP +++ +++ LQ+
Sbjct: 252 RGYASPDLSKLY--KNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 120/287 (41%), Gaps = 39/287 (13%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWL 187
A +F LG+G FG V+ E+N + +A+K L L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA-REKN--------SKFILALKVLFKAQLEKAGVEHQLR 56
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
EV +L HPN+++L GY + + L+ E+ P G++ L + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
L A L++ H K VI+RD K N+LL + K++DFG + AP + +
Sbjct: 117 L--ANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC---- 167
Query: 308 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
GT Y PE + K D++S GV+ E L G+ + N + +
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRIS-------- 219
Query: 368 KRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
R+E F ++ A L ++ L +P RP + EV+E
Sbjct: 220 ----------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 130/310 (41%), Gaps = 39/310 (12%)
Query: 108 PKFSEELKVASQLRKFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTG 167
P+ + E ++AS+ + + A +F LG+G FG V+ ++ +
Sbjct: 9 PENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQ---------SK 59
Query: 168 LTVAVKTLNHDGLQG---HKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRG 224
+A+K L L+ + EV +L HPN+++L GY + + L+ E+ P G
Sbjct: 60 FILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 119
Query: 225 SLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAK 284
++ L + + L A L++ H K VI+RD K N+LL + K
Sbjct: 120 TVYRELQKLSKFDEQRTATYITEL--ANALSYCH---SKRVIHRDIKPENLLLGSAGELK 174
Query: 285 LSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRR 344
++DFG + AP + + GT Y PE + K D++S GV+ E L G+
Sbjct: 175 IADFGWSVHAPSSRRDDLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 230
Query: 345 SMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPK 404
+ N + + R+E F ++ A L ++ L +P
Sbjct: 231 PFEANTYQETYKRIS------------------RVEFTFPDFVTEGARDLISRLLKHNPS 272
Query: 405 ARPRMSEVVE 414
RP + EV+E
Sbjct: 273 QRPMLREVLE 282
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 120/287 (41%), Gaps = 39/287 (13%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWL 187
A +F LG+G FG V+ ++ + +A+K L L+ +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 60
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
EV +L HPN+++L GY + + L+ E+ P G++ L + +
Sbjct: 61 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 120
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
L A L++ H K VI+RD K N+LL + K++DFG + AP +T +
Sbjct: 121 L--ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC---- 171
Query: 308 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
GT Y PE + K D++S GV+ E L G+ + N + +
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS-------- 223
Query: 368 KRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
R+E F ++ A L ++ L +P RP + EV+E
Sbjct: 224 ----------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 260
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 14/211 (6%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 193
NF+ +GEG +G V+K + G L + + ++ E++ L
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-------EISLL 56
Query: 194 GNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKG 253
L HPN+VKL+ +++ LV+EF+ L+ + +P + +G
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 254 LAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYA 313
LAF H V++RD K N+L++ + KL+DFGLA+ +T+ T + T Y
Sbjct: 116 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYR 170
Query: 314 APEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
APE ++ + ++ D++S G + EM+T R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 14/211 (6%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 193
NF+ +GEG +G V+K + G L + + ++ E++ L
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-------EISLL 55
Query: 194 GNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKG 253
L HPN+VKL+ +++ LV+EF+ L+ + +P + +G
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 254 LAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYA 313
LAF H V++RD K N+L++ + KL+DFGLA+ +T+ T + T Y
Sbjct: 115 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYR 169
Query: 314 APEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
APE ++ + ++ D++S G + EM+T R
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 105/214 (49%), Gaps = 21/214 (9%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTV----AVKTLNHDGLQGHKEWLAE 189
F +LG+G FG VF V++ + + + V +K + + ++ L E
Sbjct: 25 QFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE 82
Query: 190 VNFLGNLLHPNLVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL 248
VN HP +VKL Y + + +L L+ +F+ G L L K + ++ +A
Sbjct: 83 VN------HPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLA- 133
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
A L LH +IYRD K NILLD + + KL+DFGL+K++ + K S G
Sbjct: 134 ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCG 188
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
T Y APE V T +D +SFGV++ EMLTG
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 120/287 (41%), Gaps = 39/287 (13%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWL 187
A +F LG+G FG V+ ++ + +A+K L L+ +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 55
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
EV +L HPN+++L GY + + L+ E+ P G++ L + +
Sbjct: 56 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 115
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
L A L++ H K VI+RD K N+LL + K++DFG + AP +T +
Sbjct: 116 L--ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC---- 166
Query: 308 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
GT Y PE + K D++S GV+ E L G+ + N + +
Sbjct: 167 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS-------- 218
Query: 368 KRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
R+E F ++ A L ++ L +P RP + EV+E
Sbjct: 219 ----------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 255
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 105/214 (49%), Gaps = 21/214 (9%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTV----AVKTLNHDGLQGHKEWLAE 189
F +LG+G FG VF V++ + + + V +K + + ++ L E
Sbjct: 26 QFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE 83
Query: 190 VNFLGNLLHPNLVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL 248
VN HP +VKL Y + + +L L+ +F+ G L L K + ++ +A
Sbjct: 84 VN------HPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRL-SKEVMFTEEDVKFYLA- 134
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
A L LH +IYRD K NILLD + + KL+DFGL+K++ + K S G
Sbjct: 135 ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCG 189
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
T Y APE V T +D +SFGV++ EMLTG
Sbjct: 190 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 187
L F+ +LG G FG V+KG W+ E + VA+K L + +KE L
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 67
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----GSLPLPWSI 242
E + ++ +P++ +L+G C+ +L++ + MP G L +++ L W +
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
++ AKG+ +L + + +++RD N+L+ + K++DFG AK + K +
Sbjct: 127 QI------AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 177
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + A E ++ T +SDV+S+GV + E++T
Sbjct: 178 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 100/220 (45%), Gaps = 22/220 (10%)
Query: 128 LKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW- 186
+KL NF +LG+G FG V + GT AVK L D + +
Sbjct: 17 MKLTDFNFL--MVLGKGSFGKV---------MLSERKGTDELYAVKILKKDVVIQDDDVE 65
Query: 187 --LAEVNFLGNLLHPNLVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIR 243
+ E L P + + C + RL V E++ G L H+ + G P ++
Sbjct: 66 CTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF 125
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVS 303
A A GL FL K +IYRD K N++LD++ + K++DFG+ K+ DG T +
Sbjct: 126 Y--AAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--T 178
Query: 304 TRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
GT Y APE + D ++FGV+L EML G+
Sbjct: 179 KXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 187
L F+ +L G FG V+KG W+ E + VA+K L + +KE L
Sbjct: 19 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 72
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----GSLPLPWSI 242
E + ++ +P++ +L+G C+ +L++ + MP G L +++ L W +
Sbjct: 73 DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 131
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
++ AKG+ +L + + +++RD N+L+ + K++DFGLAK + K +
Sbjct: 132 QI------AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 182
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + A E ++ T +SDV+S+GV + E++T
Sbjct: 183 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 141/326 (43%), Gaps = 57/326 (17%)
Query: 125 FNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTL-NHDGLQGH 183
+ND+K + ++GEG FG V K ++ K G + A+K + + H
Sbjct: 24 WNDIKF-------QDVIGEGNFGQVLKARIK-------KDGLRMDAAIKRMKEYASKDDH 69
Query: 184 KEWLAEVNFLGNL-LHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSL------ 236
+++ E+ L L HPN++ L+G C L E+ P G+L + L + L
Sbjct: 70 RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAF 129
Query: 237 --------PLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDF 288
L + A A+G+ +L ++K I+RD NIL+ +Y AK++DF
Sbjct: 130 AIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADF 186
Query: 289 GLAKDAPEDGKTHVSTRVMGT--YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSM 346
GL++ G+ + MG + A E + T+ SDV+S+GV+L E++ S+
Sbjct: 187 GLSR-----GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV----SL 237
Query: 347 DKNRPNGEHNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKAR 406
G + + G YRL P + + L QC P R
Sbjct: 238 GGTPYCGMTCAELYEKLPQG-----YRLEKP-------LNCDDEVYDLMRQCWREKPYER 285
Query: 407 PRMSEVVETL-KPLQNLKDMASSSYY 431
P ++++ +L + L+ K +++ Y
Sbjct: 286 PSFAQILVSLNRMLEERKTYVNTTLY 311
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 187
L F+ +LG G FG V+KG W+ E + VA+K L + +KE L
Sbjct: 9 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 62
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----GSLPLPWSI 242
E + ++ +P++ +L+G C+ +L+ + MP G L +++ L W +
Sbjct: 63 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 121
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
++ A+G+ +L + + +++RD N+L+ + K++DFGLAK + K +
Sbjct: 122 QI------AEGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 172
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + A E ++ T +SDV+S+GV + E++T
Sbjct: 173 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 126/293 (43%), Gaps = 56/293 (19%)
Query: 138 ESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWLAEVNFLGNL 196
+ ++G+G FG V+ G + ++ A+K+L+ +Q + +L E + L
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQ------CAIKSLSRITEMQQVEAFLREGLLMRGL 79
Query: 197 LHPNLVKLVGYCIEDD---QRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKG 253
HPN++ L+G + + LL Y M G L + P + + L A+G
Sbjct: 80 NHPNVLALIGIMLPPEGLPHVLLPY--MCHGDLLQFIRSPQRNPTVKDL-ISFGLQVARG 136
Query: 254 LAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPE----DGKTHVSTRVMGT 309
+ +L AE+ ++RD N +LD + K++DFGLA+D + + H R+
Sbjct: 137 MEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL--P 191
Query: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKR 369
+ A E + T T+KSDV+SFGV+L E+LT + P
Sbjct: 192 VKWTALESLQTYRFTTKSDVWSFGVLLWELLT------RGAPP----------------- 228
Query: 370 RFYRLLDPRLEGHFSIKGSQ---------KATQLAAQCLSRDPKARPRMSEVV 413
YR +DP HF +G + Q+ QC DP RP +V
Sbjct: 229 --YRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLV 279
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 107/219 (48%), Gaps = 23/219 (10%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 187
L F+ +LG G FG V+KG W+ E + VA+ L + +KE L
Sbjct: 46 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIMELREATSPKANKEIL 99
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----GSLPLPWSI 242
E + ++ +P++ +L+G C+ +L+ + MP G L +++ L W +
Sbjct: 100 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 158
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
++ AKG+ +L + + +++RD N+L+ + K++DFGLAK + K +
Sbjct: 159 QI------AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 209
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + A E ++ T +SDV+S+GV + E++T
Sbjct: 210 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 128/317 (40%), Gaps = 80/317 (25%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 193
+F+ L+G GGFG VFK +G T ++ + ++ + +E V L
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGK---------TYVIRRVKYNNEKAERE----VKAL 59
Query: 194 GNLLHPNLVKLVGYCIE---------DDQR---------------------LLVYEFMPR 223
L H N+V G C + DD + EF +
Sbjct: 60 AKLDHVNIVHYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDK 118
Query: 224 GSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNA 283
G+LE + ++ L + +++ KG+ ++H K +I+RD K SNI L
Sbjct: 119 GTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQV 175
Query: 284 KLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
K+ DFGL DGK TR GT Y +PE + + + D+Y+ G++L E+L
Sbjct: 176 KIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL--- 229
Query: 344 RSMDKNRPNGEHNLVEWARPHLGD----KRRFYRLLDPRLEGHFSIKGSQKATQLAAQCL 399
H+ D +F+ D R +G S +K L + L
Sbjct: 230 --------------------HVCDTAFETSKFF--TDLR-DGIISDIFDKKEKTLLQKLL 266
Query: 400 SRDPKARPRMSEVVETL 416
S+ P+ RP SE++ TL
Sbjct: 267 SKKPEDRPNTSEILRTL 283
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 187
L F+ +LG G FG V+KG W+ E + VA+K L + +KE L
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 67
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----GSLPLPWSI 242
E + ++ +P++ +L+G C+ +L++ + MP G L +++ L W +
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
++ AKG+ +L + + +++RD N+L+ + K++DFG AK + K +
Sbjct: 127 QI------AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 177
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + A E ++ T +SDV+S+GV + E++T
Sbjct: 178 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 107/219 (48%), Gaps = 23/219 (10%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 187
L F+ +LG G FG V+KG W+ E + VA+K L + +KE L
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 67
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----GSLPLPWSI 242
E + ++ +P++ +L+G C+ +L+ + MP G L +++ L W +
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
++ AKG+ +L + + +++RD N+L+ + K++DFG AK + K +
Sbjct: 127 QI------AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 177
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + A E ++ T +SDV+S+GV + E++T
Sbjct: 178 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 108/219 (49%), Gaps = 23/219 (10%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 187
L F+ +LG G FG V+KG W+ E + VA+K L + +KE L
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 69
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----GSLPLPWSI 242
E + ++ +P++ +L+G C+ +L++ + MP G L +++ L W +
Sbjct: 70 DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 128
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
++ AKG+ +L + + +++RD N+L+ + K++DFG AK + K +
Sbjct: 129 QI------AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 179
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + A E ++ T +SDV+S+GV + E++T
Sbjct: 180 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 107/219 (48%), Gaps = 23/219 (10%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 187
L F+ +L G FG V+KG W+ E + VA+K L + +KE L
Sbjct: 19 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 72
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----GSLPLPWSI 242
E + ++ +P++ +L+G C+ +L+ + MP G L +++ L W +
Sbjct: 73 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 131
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
++ AKG+ +L + + +++RD N+L+ + K++DFGLAK + K +
Sbjct: 132 QI------AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 182
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + A E ++ T +SDV+S+GV + E++T
Sbjct: 183 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 124/282 (43%), Gaps = 33/282 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGNLLHP 199
+GEG FG V +G +P P L VA+KT + +E +L E + HP
Sbjct: 21 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 74
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHL-FRKGSLPLPWSIRMKIALGAAKGLAFLH 258
++VKL+G I ++ ++ E G L + L RK SL L I L A LA+L
Sbjct: 75 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLE 131
Query: 259 EEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYV 318
K ++RD N+L+ ++ KL DFGL++ ED + +++ + APE +
Sbjct: 132 S---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI 187
Query: 319 MTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP-NGEHNLVEWARPHLGDKRRFYRLLDP 377
TS SDV+ FGV + E+L M +P G N R G++ P
Sbjct: 188 NFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP 242
Query: 378 RLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
L L +C + DP RPR +E+ L +
Sbjct: 243 TL------------YSLMTKCWAYDPSRRPRFTELKAQLSTI 272
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 141/326 (43%), Gaps = 57/326 (17%)
Query: 125 FNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTL-NHDGLQGH 183
+ND+K + ++GEG FG V K ++ K G + A+K + + H
Sbjct: 14 WNDIKF-------QDVIGEGNFGQVLKARIK-------KDGLRMDAAIKRMKEYASKDDH 59
Query: 184 KEWLAEVNFLGNL-LHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSL------ 236
+++ E+ L L HPN++ L+G C L E+ P G+L + L + L
Sbjct: 60 RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAF 119
Query: 237 --------PLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDF 288
L + A A+G+ +L ++K I+RD NIL+ +Y AK++DF
Sbjct: 120 AIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADF 176
Query: 289 GLAKDAPEDGKTHVSTRVMGT--YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSM 346
GL++ G+ + MG + A E + T+ SDV+S+GV+L E++ S+
Sbjct: 177 GLSR-----GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV----SL 227
Query: 347 DKNRPNGEHNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKAR 406
G + + G YRL P + + L QC P R
Sbjct: 228 GGTPYCGMTCAELYEKLPQG-----YRLEKP-------LNCDDEVYDLMRQCWREKPYER 275
Query: 407 PRMSEVVETL-KPLQNLKDMASSSYY 431
P ++++ +L + L+ K +++ Y
Sbjct: 276 PSFAQILVSLNRMLEERKTYVNTTLY 301
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 107/219 (48%), Gaps = 23/219 (10%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 187
L F+ +L G FG V+KG W+ E + VA+K L + +KE L
Sbjct: 12 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 65
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----GSLPLPWSI 242
E + ++ +P++ +L+G C+ +L+ + MP G L +++ L W +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
++ AKG+ +L + + +++RD N+L+ + K++DFGLAK + K +
Sbjct: 125 QI------AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + A E ++ T +SDV+S+GV + E++T
Sbjct: 176 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 124/282 (43%), Gaps = 33/282 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGNLLHP 199
+GEG FG V +G +P P L VA+KT + +E +L E + HP
Sbjct: 23 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 76
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHL-FRKGSLPLPWSIRMKIALGAAKGLAFLH 258
++VKL+G I ++ ++ E G L + L RK SL L I L A LA+L
Sbjct: 77 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLE 133
Query: 259 EEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYV 318
K ++RD N+L+ ++ KL DFGL++ ED + +++ + APE +
Sbjct: 134 S---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI 189
Query: 319 MTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP-NGEHNLVEWARPHLGDKRRFYRLLDP 377
TS SDV+ FGV + E+L M +P G N R G++ P
Sbjct: 190 NFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP 244
Query: 378 RLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
L L +C + DP RPR +E+ L +
Sbjct: 245 TL------------YSLMTKCWAYDPSRRPRFTELKAQLSTI 274
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 115/257 (44%), Gaps = 30/257 (11%)
Query: 166 TGLTVAVKTLNHDG-LQGHKEWLAEVNF-LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPR 223
TG +AVK + G + +K L +++ L + P +V+ G I + + E M
Sbjct: 49 TGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-- 106
Query: 224 GSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNA 283
G+ L ++ P+P I K+ + K L +L E+ VI+RD K SNILLD
Sbjct: 107 GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQI 164
Query: 284 KLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTS-----KSDVYSFGVVLLE 338
KL DFG++ +D R G Y APE + T ++DV+S G+ L+E
Sbjct: 165 KLCDFGISGRLVDD---KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVE 221
Query: 339 MLTGRRSMDKNRPNGE-HNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQ 397
+ TG+ + + E V P P L GH G ++
Sbjct: 222 LATGQFPYKNCKTDFEVLTKVLQEEP-------------PLLPGHMGFSGDFQS--FVKD 266
Query: 398 CLSRDPKARPRMSEVVE 414
CL++D + RP+ ++++E
Sbjct: 267 CLTKDHRKRPKYNKLLE 283
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 126/300 (42%), Gaps = 46/300 (15%)
Query: 118 SQLRKFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH 177
S+ R++ D ++ RP LG+G FG V+ ++ + +A+K L
Sbjct: 2 SKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFK 45
Query: 178 DGLQG---HKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKG 234
L+ + EV +L HPN+++L GY + + L+ E+ P G++ L +
Sbjct: 46 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 105
Query: 235 SLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA 294
+ L A L++ H K VI+RD K N+LL + K++DFG + A
Sbjct: 106 KFDEQRTATYITEL--ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 160
Query: 295 PEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGE 354
P + + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 161 PSSRRXXLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 216
Query: 355 HNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
+ + R+E F ++ A L ++ L +P RP + EV+E
Sbjct: 217 YKRIS------------------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 124/282 (43%), Gaps = 33/282 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGNLLHP 199
+GEG FG V +G +P P L VA+KT + +E +L E + HP
Sbjct: 20 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 73
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHL-FRKGSLPLPWSIRMKIALGAAKGLAFLH 258
++VKL+G I ++ ++ E G L + L RK SL L I L A LA+L
Sbjct: 74 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLE 130
Query: 259 EEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYV 318
K ++RD N+L+ ++ KL DFGL++ ED + +++ + APE +
Sbjct: 131 S---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI 186
Query: 319 MTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP-NGEHNLVEWARPHLGDKRRFYRLLDP 377
TS SDV+ FGV + E+L M +P G N R G++ P
Sbjct: 187 NFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP 241
Query: 378 RLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
L L +C + DP RPR +E+ L +
Sbjct: 242 TL------------YSLMTKCWAYDPSRRPRFTELKAQLSTI 271
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 198 HPNLVKLVGYCIEDDQRLL-VYEFMPRGSLENHLFRKGSLPLP----WSIRMKIALGAAK 252
HP LV L C + + RL V E++ G L H+ R+ LP +S + +AL
Sbjct: 112 HPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN--- 167
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
+LHE + +IYRD K N+LLD++ + KL+D+G+ K+ G T ++ GT Y
Sbjct: 168 ---YLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSTFCGTPNY 219
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMD--KNRPNGEHNLVEWARPHLGDKRR 370
APE + D ++ GV++ EM+ GR D + N + N ++
Sbjct: 220 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL--------- 270
Query: 371 FYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKAR 406
F +L+ ++ S+ S KA + L++DPK R
Sbjct: 271 FQVILEKQIRIPRSL--SVKAASVLKSFLNKDPKER 304
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 127/300 (42%), Gaps = 46/300 (15%)
Query: 118 SQLRKFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH 177
S+ R++ D ++ RP LG+G FG V+ ++ + +A+K L
Sbjct: 2 SKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFK 45
Query: 178 DGLQG---HKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKG 234
L+ + EV +L HPN+++L GY + + L+ E+ P G++ L +
Sbjct: 46 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 105
Query: 235 SLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA 294
+ L A L++ H K VI+RD K N+LL + K+++FG + A
Sbjct: 106 KFDEQRTATYITEL--ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHA 160
Query: 295 PEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGE 354
P + T + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 161 PSSRR----TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 216
Query: 355 HNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
+ + R+E F ++ A L ++ L +P RP + EV+E
Sbjct: 217 YKRIS------------------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 107/219 (48%), Gaps = 23/219 (10%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 187
L F+ +LG G FG V+KG W+ E + VA+K L + +KE L
Sbjct: 19 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 72
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----GSLPLPWSI 242
E + ++ +P++ +L+G C+ +L+ + MP G L +++ L W +
Sbjct: 73 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 131
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
++ AKG+ +L + + +++RD N+L+ + K++DFG AK + K +
Sbjct: 132 QI------AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 182
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + A E ++ T +SDV+S+GV + E++T
Sbjct: 183 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 124/282 (43%), Gaps = 33/282 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGNLLHP 199
+GEG FG V +G +P P L VA+KT + +E +L E + HP
Sbjct: 46 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 99
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHL-FRKGSLPLPWSIRMKIALGAAKGLAFLH 258
++VKL+G I ++ ++ E G L + L RK SL L I L A LA+L
Sbjct: 100 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLE 156
Query: 259 EEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYV 318
K ++RD N+L+ ++ KL DFGL++ ED + +++ + APE +
Sbjct: 157 S---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI 212
Query: 319 MTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP-NGEHNLVEWARPHLGDKRRFYRLLDP 377
TS SDV+ FGV + E+L M +P G N R G++ P
Sbjct: 213 NFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP 267
Query: 378 RLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
L L +C + DP RPR +E+ L +
Sbjct: 268 TL------------YSLMTKCWAYDPSRRPRFTELKAQLSTI 297
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 107/219 (48%), Gaps = 23/219 (10%)
Query: 130 LATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 187
L F+ +LG G FG V+KG W+ E + VA+K L + +KE L
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 65
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRK-----GSLPLPWSI 242
E + ++ +P++ +L+G C+ +L+ + MP G L +++ L W +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
++ AKG+ +L + + +++RD N+L+ + K++DFG AK + K +
Sbjct: 125 QI------AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 175
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ + A E ++ T +SDV+S+GV + E++T
Sbjct: 176 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 113/247 (45%), Gaps = 30/247 (12%)
Query: 113 ELKVASQLRKFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAV 172
E+ + +Q ++ ++ L+ F E LGE FG V+KG + G AP + VA+
Sbjct: 8 EMPLINQHKQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHL--FGPAPGEQTQA--VAI 61
Query: 173 KTLNHDGLQG--HKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHL 230
KTL D +G +E+ E L HPN+V L+G +D +++ + G L L
Sbjct: 62 KTLK-DKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 120
Query: 231 FR----------------KGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSN 274
K +L P + + + A G+ +L + V+++D T N
Sbjct: 121 VMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAA--GMEYL---SSHHVVHKDLATRN 175
Query: 275 ILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGV 334
+L+ N K+SD GL ++ + + + APE +M G + SD++S+GV
Sbjct: 176 VLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGV 235
Query: 335 VLLEMLT 341
VL E+ +
Sbjct: 236 VLWEVFS 242
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 119/287 (41%), Gaps = 39/287 (13%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWL 187
A +F LG+G FG V+ ++ +A+K L L+ +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRK---------FILALKVLFKAQLEKAGVEHQLR 53
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
EV +L HPN+++L GY + + L+ E+ P G++ L + +
Sbjct: 54 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 113
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
L A L++ H K VI+RD K N+LL + K++DFG + AP +T +
Sbjct: 114 L--ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC---- 164
Query: 308 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
GT Y PE + K D++S GV+ E L G+ + N + +
Sbjct: 165 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS-------- 216
Query: 368 KRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
R+E F ++ A L ++ L +P RP + EV+E
Sbjct: 217 ----------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 253
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 128/302 (42%), Gaps = 46/302 (15%)
Query: 116 VASQLRKFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTL 175
+ S+ R++ D ++ RP LG+G FG V+ ++ + +A+K L
Sbjct: 1 MESKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVL 44
Query: 176 NHDGLQG---HKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFR 232
L+ + EV +L HPN+++L GY + + L+ E+ P G++ L +
Sbjct: 45 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 104
Query: 233 KGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAK 292
+ L A L++ H K VI+RD K N+LL + K+++FG +
Sbjct: 105 LSKFDEQRTATYITEL--ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSV 159
Query: 293 DAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPN 352
AP +T + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 160 HAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
Query: 353 GEHNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
+ + R+E F ++ A L ++ L +P RP + EV
Sbjct: 216 ETYKRIS------------------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 257
Query: 413 VE 414
+E
Sbjct: 258 LE 259
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 119/286 (41%), Gaps = 40/286 (13%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA----- 188
+F+ +LLG+G F V++ TGL VA+K ++ + +K +
Sbjct: 12 DFKVGNLLGKGSFAGVYRAE---------SIHTGLEVAIKMIDKKAM--YKAGMVQRVQN 60
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL 248
EV L HP++++L Y + + LV E G + +L + P +
Sbjct: 61 EVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVK-PFSENEARHFMH 119
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
G+ +LH +++RD SN+LL + N K++DFGLA + H + + G
Sbjct: 120 QIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCG 174
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDK 368
T Y +PE +SDV+S G + +L GR D + N V A
Sbjct: 175 TPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA------- 227
Query: 369 RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
D + SI +A L Q L R+P R +S V++
Sbjct: 228 -------DYEMPSFLSI----EAKDLIHQLLRRNPADRLSLSSVLD 262
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 96/223 (43%), Gaps = 26/223 (11%)
Query: 128 LKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 187
+KL +F +LG+G FG VF A K T A+K L D + +
Sbjct: 13 IKLKIEDFELHKMLGKGSFGKVF--------LAEFK-KTNQFFAIKALKKDVVLMDDD-- 61
Query: 188 AEVNFLGNLL------HPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWS 241
E + + HP L + + V E++ G L H+ + S
Sbjct: 62 VECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLS 119
Query: 242 IRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKD-APEDGKT 300
A GL FLH K ++YRD K NILLD D + K++DFG+ K+ D KT
Sbjct: 120 RATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT 176
Query: 301 HVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
+ GT Y APE ++ D +SFGV+L EML G+
Sbjct: 177 N---EFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 124/282 (43%), Gaps = 33/282 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGNLLHP 199
+GEG FG V +G +P P L VA+KT + +E +L E + HP
Sbjct: 15 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 68
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHL-FRKGSLPLPWSIRMKIALGAAKGLAFLH 258
++VKL+G I ++ ++ E G L + L RK SL L I L A LA+L
Sbjct: 69 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLE 125
Query: 259 EEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYV 318
K ++RD N+L+ ++ KL DFGL++ ED + +++ + APE +
Sbjct: 126 S---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI 181
Query: 319 MTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP-NGEHNLVEWARPHLGDKRRFYRLLDP 377
TS SDV+ FGV + E+L M +P G N R G++ P
Sbjct: 182 NFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP 236
Query: 378 RLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
L L +C + DP RPR +E+ L +
Sbjct: 237 TL------------YSLMTKCWAYDPSRRPRFTELKAQLSTI 266
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 22/212 (10%)
Query: 198 HPNLVKLVGYCIEDDQRLL-VYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAF 256
HP LV L C + + RL V E++ G L H+ R+ LP + + A L +
Sbjct: 80 HPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNY 136
Query: 257 LHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPE 316
LHE + +IYRD K N+LLD++ + KL+D+G+ K+ G T ++ GT Y APE
Sbjct: 137 LHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAPE 191
Query: 317 YVMTGHLTSKSDVYSFGVVLLEMLTGRRSMD--KNRPNGEHNLVEWARPHLGDKRRFYRL 374
+ D ++ GV++ EM+ GR D + N + N ++ F +
Sbjct: 192 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL---------FQVI 242
Query: 375 LDPRLEGHFSIKGSQKATQLAAQCLSRDPKAR 406
L+ ++ S+ S KA + L++DPK R
Sbjct: 243 LEKQIRIPRSM--SVKAASVLKSFLNKDPKER 272
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 124/282 (43%), Gaps = 33/282 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGNLLHP 199
+GEG FG V +G +P P L VA+KT + +E +L E + HP
Sbjct: 18 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHL-FRKGSLPLPWSIRMKIALGAAKGLAFLH 258
++VKL+G I ++ ++ E G L + L RK SL L I L A LA+L
Sbjct: 72 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLE 128
Query: 259 EEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYV 318
K ++RD N+L+ ++ KL DFGL++ ED + +++ + APE +
Sbjct: 129 S---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI 184
Query: 319 MTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP-NGEHNLVEWARPHLGDKRRFYRLLDP 377
TS SDV+ FGV + E+L M +P G N R G++ P
Sbjct: 185 NFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP 239
Query: 378 RLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
L L +C + DP RPR +E+ L +
Sbjct: 240 TL------------YSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 102/212 (48%), Gaps = 22/212 (10%)
Query: 198 HPNLVKLVGYCIEDDQRLL-VYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAF 256
HP LV L C + + RL V E++ G L H+ R+ LP + + A L +
Sbjct: 69 HPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNY 125
Query: 257 LHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPE 316
LHE +IYRD K N+LLD++ + KL+D+G+ K+ G T ++ GT Y APE
Sbjct: 126 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAPE 180
Query: 317 YVMTGHLTSKSDVYSFGVVLLEMLTGRRSMD--KNRPNGEHNLVEWARPHLGDKRRFYRL 374
+ D ++ GV++ EM+ GR D + N + N ++ F +
Sbjct: 181 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL---------FQVI 231
Query: 375 LDPRLEGHFSIKGSQKATQLAAQCLSRDPKAR 406
L+ ++ S+ S KA + L++DPK R
Sbjct: 232 LEKQIRIPRSL--SVKAASVLKSFLNKDPKER 261
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 123/291 (42%), Gaps = 34/291 (11%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTL--NHDGLQGHKEWLAEVNFLGNLL 197
L+GEG +G V K ++ TG VA+K + D K + E+ L L
Sbjct: 32 LVGEGSYGMVMKCRNKD---------TGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 198 HPNLVKLVGYCIEDDQRLLVYEFMPRGSLEN-HLFRKGSLPLPWSIRMKIALGAAKGLAF 256
H NLV L+ C + + LV+EF+ L++ LF G L + + K G+ F
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG---LDYQVVQKYLFQIINGIGF 139
Query: 257 LHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPE 316
H +I+RD K NIL+ KL DFG A+ G+ + + T Y APE
Sbjct: 140 CHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE--VATRWYRAPE 194
Query: 317 YVMTGHLTSKS-DVYSFGVVLLEMLTGRRSM--DKNRPNGEH------NLVEWARPHLGD 367
++ K+ DV++ G ++ EM G D + H NL+ +
Sbjct: 195 LLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNK 254
Query: 368 KRRFYRLLDPRLEGHFSI-----KGSQKATQLAAQCLSRDPKARPRMSEVV 413
F + P ++ + K S+ LA +CL DP RP +E++
Sbjct: 255 NPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELL 305
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 21/236 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V G K VA+K + +G E++ E + NL H
Sbjct: 32 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 80
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L G C + ++ E+M G L N+L R+ +++ + + +L
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE-- 137
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMT 320
K ++RD N L++ K+SDFGL++ +D +T S ++ PE +M
Sbjct: 138 -SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETS-SVGSKFPVRWSPPEVLMY 195
Query: 321 GHLTSKSDVYSFGVVLLEMLT-GRRSMDK--NRPNGEHNL--VEWARPHLGDKRRF 371
+SKSD+++FGV++ E+ + G+ ++ N EH + RPHL ++ +
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVY 251
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 94/206 (45%), Gaps = 28/206 (13%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---LAEVNFLGNLL 197
+G G FG V+ N VA+K +++ G Q +++W + EV FL L
Sbjct: 62 IGHGSFGAVYFARDVRNSE---------VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 112
Query: 198 HPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFL 257
HPN ++ G + + LV E+ GS + L PL + GA +GLA+L
Sbjct: 113 HPNTIQYRGCYLREHTAWLVMEYC-LGSASD-LLEVHKKPLQEVEIAAVTHGALQGLAYL 170
Query: 258 HEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKD-APEDGKTHVSTRVMGTYGYAAPE 316
H +I+RD K NILL KL DFG A AP + +GT + APE
Sbjct: 171 HSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------ANXFVGTPYWMAPE 220
Query: 317 YVMT---GHLTSKSDVYSFGVVLLEM 339
++ G K DV+S G+ +E+
Sbjct: 221 VILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 22/212 (10%)
Query: 198 HPNLVKLVGYCIEDDQRLL-VYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAF 256
HP LV L C + + RL V E++ G L H+ R+ LP + + A L +
Sbjct: 65 HPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNY 121
Query: 257 LHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPE 316
LHE + +IYRD K N+LLD++ + KL+D+G+ K+ G T ++ GT Y APE
Sbjct: 122 LHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNYIAPE 176
Query: 317 YVMTGHLTSKSDVYSFGVVLLEMLTGRRSMD--KNRPNGEHNLVEWARPHLGDKRRFYRL 374
+ D ++ GV++ EM+ GR D + N + N ++ F +
Sbjct: 177 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL---------FQVI 227
Query: 375 LDPRLEGHFSIKGSQKATQLAAQCLSRDPKAR 406
L+ ++ S+ S KA + L++DPK R
Sbjct: 228 LEKQIRIPRSL--SVKAASVLKSFLNKDPKER 257
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 101/229 (44%), Gaps = 26/229 (11%)
Query: 121 RKFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKT-LNHDG 179
RKF +D + RP LG+G FG V+ ++N K L V K+ L +G
Sbjct: 9 RKFTIDDFDIV----RP---LGKGKFGNVYLAREKQN-----KFIMALKVLFKSQLEKEG 56
Query: 180 LQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLP 239
++ + E+ +L HPN++++ Y + + L+ EF PRG L L + G
Sbjct: 57 VE--HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQ 114
Query: 240 WSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGK 299
S L A LH E+ VI+RD K N+L+ K++DFG + AP
Sbjct: 115 RSATFMEELADA-----LHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS--- 166
Query: 300 THVSTRVM-GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMD 347
+ R M GT Y PE + K D++ GV+ E L G D
Sbjct: 167 --LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 126/300 (42%), Gaps = 46/300 (15%)
Query: 118 SQLRKFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH 177
S+ R++ D ++ RP LG+G FG V+ ++ + +A+K L
Sbjct: 1 SKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFK 44
Query: 178 DGLQG---HKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKG 234
L+ + EV +L HPN+++L GY + + L+ E+ P G++ L +
Sbjct: 45 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 104
Query: 235 SLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA 294
+ L A L++ H K VI+RD K N+LL + K++DFG + A
Sbjct: 105 KFDEQRTATYITEL--ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 159
Query: 295 PEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGE 354
P + + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 160 PSSRR----DTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 215
Query: 355 HNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
+ + R+E F ++ A L ++ L +P RP + EV+E
Sbjct: 216 YKRIS------------------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 123/282 (43%), Gaps = 33/282 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGNLLHP 199
+GEG FG V +G +P P + VA+KT + +E +L E + HP
Sbjct: 398 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHL-FRKGSLPLPWSIRMKIALGAAKGLAFLH 258
++VKL+G I ++ ++ E G L + L RK SL L I L A LA+L
Sbjct: 452 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA--LAYLE 508
Query: 259 EEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYV 318
K ++RD N+L+ A KL DFGL++ ED + +++ + APE +
Sbjct: 509 S---KRFVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI 564
Query: 319 MTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP-NGEHNLVEWARPHLGDKRRFYRLLDP 377
TS SDV+ FGV + E+L M +P G N R G++ P
Sbjct: 565 NFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP 619
Query: 378 RLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
L L +C + DP RPR +E+ L +
Sbjct: 620 TL------------YSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 123/282 (43%), Gaps = 33/282 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGNLLHP 199
+GEG FG V +G +P P + VA+KT + +E +L E + HP
Sbjct: 18 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHL-FRKGSLPLPWSIRMKIALGAAKGLAFLH 258
++VKL+G I ++ ++ E G L + L RK SL L I L A LA+L
Sbjct: 72 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA--LAYLE 128
Query: 259 EEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYV 318
K ++RD N+L+ A KL DFGL++ ED + +++ + APE +
Sbjct: 129 S---KRFVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI 184
Query: 319 MTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP-NGEHNLVEWARPHLGDKRRFYRLLDP 377
TS SDV+ FGV + E+L M +P G N R G++ P
Sbjct: 185 NFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP 239
Query: 378 RLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
L L +C + DP RPR +E+ L +
Sbjct: 240 TL------------YSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 101/229 (44%), Gaps = 26/229 (11%)
Query: 121 RKFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKT-LNHDG 179
RKF +D + RP LG+G FG V+ ++N K L V K+ L +G
Sbjct: 9 RKFTIDDFDIG----RP---LGKGKFGNVYLAREKQN-----KFIMALKVLFKSQLEKEG 56
Query: 180 LQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLP 239
++ + E+ +L HPN++++ Y + + L+ EF PRG L L + G
Sbjct: 57 VE--HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQ 114
Query: 240 WSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGK 299
S L A LH E+ VI+RD K N+L+ K++DFG + AP
Sbjct: 115 RSATFMEELADA-----LHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS--- 166
Query: 300 THVSTRVM-GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMD 347
+ R M GT Y PE + K D++ GV+ E L G D
Sbjct: 167 --LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 119/287 (41%), Gaps = 39/287 (13%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWL 187
A +F LG+G FG V+ ++ + +A+K L L+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 59
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
EV +L HPN+++L GY + + L+ E+ P G++ L + +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
L A L++ H K VI+RD K N+LL + K++DFG + AP + +
Sbjct: 120 L--ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC---- 170
Query: 308 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
GT Y PE + K D++S GV+ E L G+ + N + +
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS-------- 222
Query: 368 KRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
R+E F ++ A L ++ L +P RP + EV+E
Sbjct: 223 ----------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 22/215 (10%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 189
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 190 VNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
++ L L HPN+VKL+ +++ LV+E + L+ + +P +
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQ 110
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ T + T
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 165
Query: 310 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
Y APE ++ + ++ D++S G + EM+T R
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 101/229 (44%), Gaps = 26/229 (11%)
Query: 121 RKFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKT-LNHDG 179
RKF +D + RP LG+G FG V+ ++N K L V K+ L +G
Sbjct: 10 RKFTIDDFDIG----RP---LGKGKFGNVYLAREKQN-----KFIMALKVLFKSQLEKEG 57
Query: 180 LQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLP 239
++ + E+ +L HPN++++ Y + + L+ EF PRG L L + G
Sbjct: 58 VE--HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQ 115
Query: 240 WSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGK 299
S L A LH E+ VI+RD K N+L+ K++DFG + AP
Sbjct: 116 RSATFMEELADA-----LHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS--- 167
Query: 300 THVSTRVM-GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMD 347
+ R M GT Y PE + K D++ GV+ E L G D
Sbjct: 168 --LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 124/282 (43%), Gaps = 33/282 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGNLLHP 199
+GEG FG V +G +P P + VA+KT + +E +L E + HP
Sbjct: 398 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHL-FRKGSLPLPWSIRMKIALGAAKGLAFLH 258
++VKL+G I ++ ++ E G L + L RK SL L I L A LA+L
Sbjct: 452 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA--LAYLE 508
Query: 259 EEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYV 318
K ++RD N+L+ ++ KL DFGL++ ED + +++ + APE +
Sbjct: 509 S---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI 564
Query: 319 MTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP-NGEHNLVEWARPHLGDKRRFYRLLDP 377
TS SDV+ FGV + E+L M +P G N R G++ P
Sbjct: 565 NFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP 619
Query: 378 RLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
L L +C + DP RPR +E+ L +
Sbjct: 620 TL------------YSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 119/287 (41%), Gaps = 39/287 (13%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWL 187
A +F LG+G FG V+ ++ + +A+K L L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 56
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
EV +L HPN+++L GY + + L+ E+ P G++ L + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
L A L++ H K VI+RD K N+LL + K++DFG + AP + +
Sbjct: 117 L--ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC---- 167
Query: 308 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
GT Y PE + K D++S GV+ E L G+ + N + +
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS-------- 219
Query: 368 KRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
R+E F ++ A L ++ L +P RP + EV+E
Sbjct: 220 ----------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 94/206 (45%), Gaps = 28/206 (13%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---LAEVNFLGNLL 197
+G G FG V+ N VA+K +++ G Q +++W + EV FL L
Sbjct: 23 IGHGSFGAVYFARDVRNSE---------VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73
Query: 198 HPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFL 257
HPN ++ G + + LV E+ GS + L PL + GA +GLA+L
Sbjct: 74 HPNTIQYRGCYLREHTAWLVMEYC-LGSASD-LLEVHKKPLQEVEIAAVTHGALQGLAYL 131
Query: 258 HEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKD-APEDGKTHVSTRVMGTYGYAAPE 316
H +I+RD K NILL KL DFG A AP + +GT + APE
Sbjct: 132 HSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------ANXFVGTPYWMAPE 181
Query: 317 YVMT---GHLTSKSDVYSFGVVLLEM 339
++ G K DV+S G+ +E+
Sbjct: 182 VILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 119/287 (41%), Gaps = 39/287 (13%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWL 187
A +F LG+G FG V+ ++ + +A+K L L+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 59
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
EV +L HPN+++L GY + + L+ E+ P G++ L + +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
L A L++ H K VI+RD K N+LL + K++DFG + AP + +
Sbjct: 120 L--ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC---- 170
Query: 308 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
GT Y PE + K D++S GV+ E L G+ + N + +
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS-------- 222
Query: 368 KRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
R+E F ++ A L ++ L +P RP + EV+E
Sbjct: 223 ----------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 119/287 (41%), Gaps = 39/287 (13%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWL 187
A +F LG+G FG V+ ++ + +A+K L L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFILALKVLFKAQLEKAGVEHQLR 56
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
EV +L HPN+++L GY + + L+ E+ P G++ L + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
L A L++ H K VI+RD K N+LL + K++DFG + AP + +
Sbjct: 117 L--ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC---- 167
Query: 308 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
GT Y PE + K D++S GV+ E L G+ + N + +
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS-------- 219
Query: 368 KRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
R+E F ++ A L ++ L +P RP + EV+E
Sbjct: 220 ----------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 22/218 (10%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 186
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 52
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+ E++ L L HPN+VKL+ +++ LV+E + + L+ + +P +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSY 111
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
+GLAF H V++RD K N+L++ + KL+DFGLA+ +T+ V
Sbjct: 112 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
Query: 307 MGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 21/236 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V G K VA+K + +G E++ E + NL H
Sbjct: 16 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 64
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L G C + ++ E+M G L N+L R+ +++ + + +L
Sbjct: 65 LVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE-- 121
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMT 320
K ++RD N L++ K+SDFGL++ +D T S ++ PE +M
Sbjct: 122 -SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMY 179
Query: 321 GHLTSKSDVYSFGVVLLEMLT-GRRSMDK--NRPNGEHNL--VEWARPHLGDKRRF 371
+SKSD+++FGV++ E+ + G+ ++ N EH + RPHL ++ +
Sbjct: 180 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVY 235
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 124/282 (43%), Gaps = 33/282 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGNLLHP 199
+GEG FG V +G +P P + VA+KT + +E +L E + HP
Sbjct: 18 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHL-FRKGSLPLPWSIRMKIALGAAKGLAFLH 258
++VKL+G I ++ ++ E G L + L RK SL L I L A LA+L
Sbjct: 72 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLE 128
Query: 259 EEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYV 318
K ++RD N+L+ ++ KL DFGL++ ED + +++ + APE +
Sbjct: 129 S---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI 184
Query: 319 MTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP-NGEHNLVEWARPHLGDKRRFYRLLDP 377
TS SDV+ FGV + E+L M +P G N R G++ P
Sbjct: 185 NFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP 239
Query: 378 RLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
L L +C + DP RPR +E+ L +
Sbjct: 240 TL------------YSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 127/302 (42%), Gaps = 46/302 (15%)
Query: 116 VASQLRKFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTL 175
+ S+ R++ D ++ RP LG+G FG V+ ++ + +A+K L
Sbjct: 1 MESKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVL 44
Query: 176 NHDGLQG---HKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFR 232
L+ + EV +L HPN+++L GY + + L+ E+ P G++ L +
Sbjct: 45 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 104
Query: 233 KGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAK 292
+ L A L++ H K VI+RD K N+LL + K++DFG +
Sbjct: 105 LSKFDEQRTATYITEL--ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV 159
Query: 293 DAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPN 352
AP + + GT Y PE + K D++S GV+ E L G+ + N
Sbjct: 160 HAPSSRRXXLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
Query: 353 GEHNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
+ + R+E F ++ A L ++ L +P RP + EV
Sbjct: 216 ETYKRIS------------------RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 257
Query: 413 VE 414
+E
Sbjct: 258 LE 259
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 114/245 (46%), Gaps = 36/245 (14%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGL-----QGHKEWLA 188
N++ LGEG FG V + TG VA+K +N L QG E
Sbjct: 15 NYQIVKTLGEGSFGKVKLAY---------HTTTGQKVALKIINKKVLAKSDMQGRIE--R 63
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL 248
E+++L L HP+++KL D+ ++V E+ L +++ ++ + + R +
Sbjct: 64 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQI 122
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
+A H+ +++RD K N+LLD N K++DFGL+ + S G
Sbjct: 123 ISAVEYCHRHK-----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---G 174
Query: 309 TYGYAAPEYVMTGHLTS--KSDVYSFGVVLLEMLTGRRSMD--------KNRPNGEHNLV 358
+ YAAPE V++G L + + DV+S GV+L ML R D KN NG + L
Sbjct: 175 SPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 233
Query: 359 EWARP 363
++ P
Sbjct: 234 KFLSP 238
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 21/236 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V G K VA+K + +G E++ E + NL H
Sbjct: 12 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 60
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L G C + ++ E+M G L N+L R+ +++ + + +L
Sbjct: 61 LVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE-- 117
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMT 320
K ++RD N L++ K+SDFGL++ +D T S ++ PE +M
Sbjct: 118 -SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMY 175
Query: 321 GHLTSKSDVYSFGVVLLEMLT-GRRSMDK--NRPNGEHNL--VEWARPHLGDKRRF 371
+SKSD+++FGV++ E+ + G+ ++ N EH + RPHL ++ +
Sbjct: 176 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVY 231
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 120/293 (40%), Gaps = 38/293 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V G K VA+K + +G E++ E + NL H
Sbjct: 17 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 65
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L G C + ++ E+M G L N+L R+ +++ + + +L
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE-- 122
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMT 320
K ++RD N L++ K+SDFGL++ +D T S ++ PE +M
Sbjct: 123 -SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMY 180
Query: 321 GHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPRLE 380
+SKSD+++FGV++ E+ + + + N E H+ R YR P L
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE------TAEHIAQGLRLYR---PHL- 230
Query: 381 GHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPLQNLKDMASSSYYFQ 433
S+K + C RP + L N+ D+ + Y Q
Sbjct: 231 ------ASEKVYTIMYSCWHEKADERPTFKIL------LSNILDVMDENLYGQ 271
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 114/245 (46%), Gaps = 36/245 (14%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGL-----QGHKEWLA 188
N++ LGEG FG V + TG VA+K +N L QG E
Sbjct: 5 NYQIVKTLGEGSFGKVKLAY---------HTTTGQKVALKIINKKVLAKSDMQGRIE--R 53
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL 248
E+++L L HP+++KL D+ ++V E+ L +++ ++ + + R +
Sbjct: 54 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQI 112
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
+A H+ +++RD K N+LLD N K++DFGL+ + S G
Sbjct: 113 ISAVEYCHRHK-----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---G 164
Query: 309 TYGYAAPEYVMTGHLTS--KSDVYSFGVVLLEMLTGRRSMD--------KNRPNGEHNLV 358
+ YAAPE V++G L + + DV+S GV+L ML R D KN NG + L
Sbjct: 165 SPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 223
Query: 359 EWARP 363
++ P
Sbjct: 224 KFLSP 228
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 114/245 (46%), Gaps = 36/245 (14%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGL-----QGHKEWLA 188
N++ LGEG FG V + TG VA+K +N L QG E
Sbjct: 14 NYQIVKTLGEGSFGKVKLAY---------HTTTGQKVALKIINKKVLAKSDMQGRIE--R 62
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL 248
E+++L L HP+++KL D+ ++V E+ L +++ ++ + + R +
Sbjct: 63 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQI 121
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
+A H+ +++RD K N+LLD N K++DFGL+ + S G
Sbjct: 122 ISAVEYCHRHK-----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---G 173
Query: 309 TYGYAAPEYVMTGHLTS--KSDVYSFGVVLLEMLTGRRSMD--------KNRPNGEHNLV 358
+ YAAPE V++G L + + DV+S GV+L ML R D KN NG + L
Sbjct: 174 SPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 232
Query: 359 EWARP 363
++ P
Sbjct: 233 KFLSP 237
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 96/219 (43%), Gaps = 22/219 (10%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-- 186
+L NF +LG+G FG V V+E TG AVK L D + +
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKE---------TGDLYAVKVLKKDVILQDDDVEC 69
Query: 187 -LAEVNFLGNLL-HPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
+ E L HP L +L D+ V EF+ G L H+ + R
Sbjct: 70 TMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD---EARA 126
Query: 245 KI-ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVS 303
+ A L FLH+ K +IYRD K N+LLD + + KL+DFG+ K+ +G T +
Sbjct: 127 RFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--T 181
Query: 304 TRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
GT Y APE + D ++ GV+L EML G
Sbjct: 182 ATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 17/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LGEG +G V+K +E TG VA+K + + +E + E++ + P+
Sbjct: 37 LGEGSYGSVYKAIHKE---------TGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPH 85
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
+VK G ++ +V E+ GS+ + + R + L I KGL +LH
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSD-IIRLRNKTLTEDEIATILQSTLKGLEYLHFM 144
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMT 320
+ I+RD K NILL+ + +AKL+DFG+A + V+GT + APE +
Sbjct: 145 RK---IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKR--NXVIGTPFWMAPEVIQE 199
Query: 321 GHLTSKSDVYSFGVVLLEMLTGR 343
+D++S G+ +EM G+
Sbjct: 200 IGYNCVADIWSLGITAIEMAEGK 222
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 16/215 (7%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 188
+L +F S LG G G V K +G + L + N + +
Sbjct: 12 ELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRN--------QIIR 63
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL 248
E+ L P +V G D + + E M GSL+ L K + +P I K+++
Sbjct: 64 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KEAKRIPEEILGKVSI 121
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
+GLA+L E+ + +++RD K SNIL+++ KL DFG++ + ++ +G
Sbjct: 122 AVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVG 175
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
T Y APE + H + +SD++S G+ L+E+ GR
Sbjct: 176 TRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 141/326 (43%), Gaps = 57/326 (17%)
Query: 125 FNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTL-NHDGLQGH 183
+ND+K + ++GEG FG V K ++ K G + A+K + + H
Sbjct: 21 WNDIKF-------QDVIGEGNFGQVLKARIK-------KDGLRMDAAIKRMKEYASKDDH 66
Query: 184 KEWLAEVNFLGNL-LHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSL------ 236
+++ E+ L L HPN++ L+G C L E+ P G+L + L + L
Sbjct: 67 RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAF 126
Query: 237 --------PLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDF 288
L + A A+G+ +L ++K I+R+ NIL+ +Y AK++DF
Sbjct: 127 AIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADF 183
Query: 289 GLAKDAPEDGKTHVSTRVMGT--YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSM 346
GL++ G+ + MG + A E + T+ SDV+S+GV+L E++ S+
Sbjct: 184 GLSR-----GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV----SL 234
Query: 347 DKNRPNGEHNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKAR 406
G + + G YRL P + + L QC P R
Sbjct: 235 GGTPYCGMTCAELYEKLPQG-----YRLEKP-------LNCDDEVYDLMRQCWREKPYER 282
Query: 407 PRMSEVVETL-KPLQNLKDMASSSYY 431
P ++++ +L + L+ K +++ Y
Sbjct: 283 PSFAQILVSLNRMLEERKTYVNTTLY 308
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 21/236 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V G K VA+K + +G E++ E + NL H
Sbjct: 32 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 80
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L G C + ++ E+M G L N+L R+ +++ + + +L
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE-- 137
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMT 320
K ++RD N L++ K+SDFGL++ +D T S ++ PE +M
Sbjct: 138 -SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMY 195
Query: 321 GHLTSKSDVYSFGVVLLEMLT-GRRSMDK--NRPNGEHNL--VEWARPHLGDKRRF 371
+SKSD+++FGV++ E+ + G+ ++ N EH + RPHL ++ +
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVY 251
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 123/282 (43%), Gaps = 33/282 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGNLLHP 199
+GEG FG V +G +P P + VA+KT + +E +L E + HP
Sbjct: 18 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHL-FRKGSLPLPWSIRMKIALGAAKGLAFLH 258
++VKL+G I ++ ++ E G L + L RK SL L I L A LA+L
Sbjct: 72 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA--LAYLE 128
Query: 259 EEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYV 318
K ++RD N+L+ ++ KL DFGL++ ED +++ + APE +
Sbjct: 129 S---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTXXKASKGKLPIKWMAPESI 184
Query: 319 MTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP-NGEHNLVEWARPHLGDKRRFYRLLDP 377
TS SDV+ FGV + E+L M +P G N R G++ P
Sbjct: 185 NFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP 239
Query: 378 RLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPL 419
L L +C + DP RPR +E+ L +
Sbjct: 240 TL------------YSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 114/245 (46%), Gaps = 36/245 (14%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGL-----QGHKEWLA 188
N++ LGEG FG V + TG VA+K +N L QG E
Sbjct: 9 NYQIVKTLGEGSFGKVKLAY---------HTTTGQKVALKIINKKVLAKSDMQGRIE--R 57
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL 248
E+++L L HP+++KL D+ ++V E+ L +++ ++ + + R +
Sbjct: 58 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQI 116
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
+A H+ +++RD K N+LLD N K++DFGL+ + S G
Sbjct: 117 ISAVEYCHRHK-----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---G 168
Query: 309 TYGYAAPEYVMTGHLTS--KSDVYSFGVVLLEMLTGRRSMD--------KNRPNGEHNLV 358
+ YAAPE V++G L + + DV+S GV+L ML R D KN NG + L
Sbjct: 169 SPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 227
Query: 359 EWARP 363
++ P
Sbjct: 228 KFLSP 232
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 96/223 (43%), Gaps = 26/223 (11%)
Query: 128 LKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 187
+KL +F +LG+G FG VF ++ T A+K L D + +
Sbjct: 12 IKLKIEDFILHKMLGKGSFGKVFLAEFKK---------TNQFFAIKALKKDVVLMDDD-- 60
Query: 188 AEVNFLGNLL------HPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWS 241
E + + HP L + + V E++ G L H+ + S
Sbjct: 61 VECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLS 118
Query: 242 IRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKD-APEDGKT 300
A GL FLH K ++YRD K NILLD D + K++DFG+ K+ D KT
Sbjct: 119 RATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT 175
Query: 301 HVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
+ GT Y APE ++ D +SFGV+L EML G+
Sbjct: 176 N---XFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 21/236 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V G K VA+K + +G E++ E + NL H
Sbjct: 23 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 71
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L G C + ++ E+M G L N+L R+ +++ + + +L
Sbjct: 72 LVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE-- 128
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMT 320
K ++RD N L++ K+SDFGL++ +D T S ++ PE +M
Sbjct: 129 -SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMY 186
Query: 321 GHLTSKSDVYSFGVVLLEMLT-GRRSMDK--NRPNGEHNL--VEWARPHLGDKRRF 371
+SKSD+++FGV++ E+ + G+ ++ N EH + RPHL ++ +
Sbjct: 187 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVY 242
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 27/239 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V G K VA+K + +G E++ E + NL H
Sbjct: 17 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 65
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV+L G C + ++ E+M G L N+L R+ +++ + + +L
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLE-- 122
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT---YGYAAPEY 317
K ++RD N L++ K+SDFGL++ +D T S+R G+ ++ PE
Sbjct: 123 -SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT--SSR--GSKFPVRWSPPEV 177
Query: 318 VMTGHLTSKSDVYSFGVVLLEMLT-GRRSMDK--NRPNGEHNL--VEWARPHLGDKRRF 371
+M +SKSD+++FGV++ E+ + G+ ++ N EH + RPHL ++ +
Sbjct: 178 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVY 236
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 128/297 (43%), Gaps = 43/297 (14%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNF 192
++ + ++G G V + AP K VA+K +N + Q E L E+
Sbjct: 16 DYELQEVIGSGATAVVQAAY-----CAPKKE----KVAIKRINLEKCQTSMDELLKEIQA 66
Query: 193 LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLEN---HLFRKG---SLPLPWSIRMKI 246
+ HPN+V + D+ LV + + GS+ + H+ KG S L S I
Sbjct: 67 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 126
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDG---KTHVS 303
+GL +LH+ + I+RD K NILL D + +++DFG++ G + V
Sbjct: 127 LREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVR 183
Query: 304 TRVMGTYGYAAPEYV--MTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWA 361
+GT + APE + + G+ K+D++SFG+ +E+ TG K P L
Sbjct: 184 KTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN 242
Query: 362 RPHLGDKRRFYRLLDPRLEGHFSIKGSQKAT-----QLAAQCLSRDPKARPRMSEVV 413
P P LE K K ++ + CL +DP+ RP +E++
Sbjct: 243 DP-------------PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 128/297 (43%), Gaps = 43/297 (14%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNF 192
++ + ++G G V + AP K VA+K +N + Q E L E+
Sbjct: 11 DYELQEVIGSGATAVVQAAY-----CAPKKE----KVAIKRINLEKCQTSMDELLKEIQA 61
Query: 193 LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLEN---HLFRKG---SLPLPWSIRMKI 246
+ HPN+V + D+ LV + + GS+ + H+ KG S L S I
Sbjct: 62 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 121
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDG---KTHVS 303
+GL +LH+ + I+RD K NILL D + +++DFG++ G + V
Sbjct: 122 LREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVR 178
Query: 304 TRVMGTYGYAAPEYV--MTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWA 361
+GT + APE + + G+ K+D++SFG+ +E+ TG K P L
Sbjct: 179 KTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN 237
Query: 362 RPHLGDKRRFYRLLDPRLEGHFSIKGSQKAT-----QLAAQCLSRDPKARPRMSEVV 413
P P LE K K ++ + CL +DP+ RP +E++
Sbjct: 238 DP-------------PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 105/214 (49%), Gaps = 23/214 (10%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK---EWLAEVNFLGNLL 197
LG G FG V G E TG VAVK LN ++ + E+ L
Sbjct: 24 LGVGTFGKVKVGKHE---------LTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR 74
Query: 198 HPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFL 257
HP+++KL +V E++ G L +++ + G L S R+ + + G+ +
Sbjct: 75 HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILS--GVDYC 132
Query: 258 HEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEY 317
H V++RD K N+LLDA NAK++DFGL+ + DG+ + G+ YAAPE
Sbjct: 133 HRHM---VVHRDLKPENVLLDAHMNAKIADFGLS-NMMSDGEFLRXS--CGSPNYAAPE- 185
Query: 318 VMTGHLTS--KSDVYSFGVVLLEMLTGRRSMDKN 349
V++G L + + D++S GV+L +L G D +
Sbjct: 186 VISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD 219
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 113/228 (49%), Gaps = 46/228 (20%)
Query: 144 GGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGN--LLHPNL 201
G FGCV+K + + VAVK LQ + W +E + H NL
Sbjct: 26 GRFGCVWKAQLMND-----------FVAVKIFP---LQDKQSWQSEREIFSTPGMKHENL 71
Query: 202 VKLV-----GYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAF 256
++ + G +E + L+ F +GSL ++L KG++ + W+ +A ++GL++
Sbjct: 72 LQFIAAEKRGSNLEV-ELWLITAFHDKGSLTDYL--KGNI-ITWNELCHVAETMSRGLSY 127
Query: 257 LHE-------EAEKPVI-YRDFKTSNILLDADYNAKLSDFGLA---KDAPEDGKTHVSTR 305
LHE E KP I +RDFK+ N+LL +D A L+DFGLA + G TH
Sbjct: 128 LHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQ-- 185
Query: 306 VMGTYGYAAPEYVMTGHLTSKS------DVYSFGVVLLEMLTGRRSMD 347
+GT Y APE V+ G + + D+Y+ G+VL E+++ ++ D
Sbjct: 186 -VGTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 123/276 (44%), Gaps = 37/276 (13%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEVNFLGNLLHP 199
+G+G FG V+KG +N T V VA+K ++ + ++ E+ L P
Sbjct: 27 IGKGSFGEVYKGI--DNHTKEV-------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 77
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
+ + G ++ + ++ E++ GS + L + G PL + I KGL +LH
Sbjct: 78 YITRYFGSYLKSTKLWIIMEYLGGGSALD-LLKPG--PLEETYIATILREILKGLDYLHS 134
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVS-TRVMGTYGYAAPEYV 318
E + I+RD K +N+LL + KL+DFG+A + T + +GT + APE +
Sbjct: 135 ERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTD---TQIKRNXFVGTPFWMAPEVI 188
Query: 319 MTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPR 378
K+D++S G+ +E+ G P L+ P P
Sbjct: 189 KQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP-------------PT 235
Query: 379 LEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
LEG + S+ + CL++DP+ RP E+++
Sbjct: 236 LEG----QHSKPFKEFVEACLNKDPRFRPTAKELLK 267
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 17/222 (7%)
Query: 122 KFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQ 181
K ++ D KL T + LG G FG V KG+ + V + + N L+
Sbjct: 361 KEVYLDRKLLTLE---DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK 414
Query: 182 GHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWS 241
E LAE N + L +P +V+++G C E + +LV E G L +L + +
Sbjct: 415 --DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI 471
Query: 242 IRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTH 301
I ++ + G+ +L E ++RD N+LL + AK+SDFGL+K D + +
Sbjct: 472 I--ELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD-ENY 525
Query: 302 VSTRVMGTY--GYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ G + + APE + +SKSDV+SFGV++ E +
Sbjct: 526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 17/222 (7%)
Query: 122 KFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQ 181
K ++ D KL T + LG G FG V KG+ + V + + N L+
Sbjct: 362 KEVYLDRKLLTLE---DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK 415
Query: 182 GHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWS 241
E LAE N + L +P +V+++G C E + +LV E G L +L + +
Sbjct: 416 --DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI 472
Query: 242 IRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTH 301
I ++ + G+ +L E ++RD N+LL + AK+SDFGL+K D + +
Sbjct: 473 I--ELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD-ENY 526
Query: 302 VSTRVMGTY--GYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+ G + + APE + +SKSDV+SFGV++ E +
Sbjct: 527 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 106/235 (45%), Gaps = 30/235 (12%)
Query: 125 FNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG-- 182
++ L+ F E LGE FG V+KG + G AP + VA+KTL D +G
Sbjct: 3 LKEISLSAVRFMEE--LGEDRFGKVYKGHL--FGPAPGEQTQA--VAIKTLK-DKAEGPL 55
Query: 183 HKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFR---------- 232
+E+ E L HPN+V L+G +D +++ + G L L
Sbjct: 56 REEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGST 115
Query: 233 ------KGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLS 286
K +L P + + + A G+ +L + V+++D T N+L+ N K+S
Sbjct: 116 DDDRTVKSALEPPDFVHLVAQIAA--GMEYL---SSHHVVHKDLATRNVLVYDKLNVKIS 170
Query: 287 DFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
D GL ++ + + + APE +M G + SD++S+GVVL E+ +
Sbjct: 171 DLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 30/211 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAEVNFLGNL 196
+GEG +G V+K K G VA+K + D G+ + E++ L L
Sbjct: 29 VGEGTYGVVYKA----------KDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKEL 76
Query: 197 LHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL-GAAKGLA 255
HPN+V L+ + LV+EFM + + K L ++KI L +G+A
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQ---DSQIKIYLYQLLRGVA 133
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKD--APEDGKTHVSTRVMGTYGYA 313
H+ +++RD K N+L+++D KL+DFGLA+ P TH T Y
Sbjct: 134 HCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV----TLWYR 186
Query: 314 APEYVMTGHLTSKS-DVYSFGVVLLEMLTGR 343
AP+ +M S S D++S G + EM+TG+
Sbjct: 187 APDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 30/211 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAEVNFLGNL 196
+GEG +G V+K K G VA+K + D G+ + E++ L L
Sbjct: 29 VGEGTYGVVYKA----------KDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKEL 76
Query: 197 LHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL-GAAKGLA 255
HPN+V L+ + LV+EFM + + K L ++KI L +G+A
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQ---DSQIKIYLYQLLRGVA 133
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKD--APEDGKTHVSTRVMGTYGYA 313
H+ +++RD K N+L+++D KL+DFGLA+ P TH T Y
Sbjct: 134 HCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV----TLWYR 186
Query: 314 APEYVMTGHLTSKS-DVYSFGVVLLEMLTGR 343
AP+ +M S S D++S G + EM+TG+
Sbjct: 187 APDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 119/284 (41%), Gaps = 52/284 (18%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
+GEG G V V +G VAVK ++ Q + EV + + H N
Sbjct: 159 IGEGSTGIVCIATVRSSGK---------LVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 209
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMK------IALGAAKGL 254
+V++ + D+ +V EF+ G+L + + RM + L + L
Sbjct: 210 VVEMYNSYLVGDELWVVMEFLEGGALTD---------IVTHTRMNEEQIAAVCLAVLQAL 260
Query: 255 AFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFG----LAKDAPEDGKTHVSTRVMGTY 310
+ LH + VI+RD K+ +ILL D KLSDFG ++K+ P ++GT
Sbjct: 261 SVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR------RKXLVGTP 311
Query: 311 GYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRR 370
+ APE + + D++S G++++EM+ G + P L +
Sbjct: 312 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY-------------FNEPPLKAMKM 358
Query: 371 FYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
L PRL+ + S K + L RDP R +E+++
Sbjct: 359 IRDNLPPRLKNLHKVSPSLKG--FLDRLLVRDPAQRATAAELLK 400
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 14/203 (6%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V KG+ + V + + N L+ E LAE N + L +P
Sbjct: 33 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPY 87
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
+V+++G C E + +LV E G L +L + + I ++ + G+ +L E
Sbjct: 88 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--ELVHQVSMGMKYLEES 144
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTY--GYAAPEYV 318
++RD N+LL + AK+SDFGL+K D + + + G + + APE +
Sbjct: 145 N---FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWPVKWYAPECI 200
Query: 319 MTGHLTSKSDVYSFGVVLLEMLT 341
+SKSDV+SFGV++ E +
Sbjct: 201 NYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 14/203 (6%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V KG+ + V + + N L+ E LAE N + L +P
Sbjct: 35 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPY 89
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
+V+++G C E + +LV E G L +L + + I ++ + G+ +L E
Sbjct: 90 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--ELVHQVSMGMKYLEES 146
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTY--GYAAPEYV 318
++RD N+LL + AK+SDFGL+K D + + + G + + APE +
Sbjct: 147 N---FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWPVKWYAPECI 202
Query: 319 MTGHLTSKSDVYSFGVVLLEMLT 341
+SKSDV+SFGV++ E +
Sbjct: 203 NYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 14/203 (6%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V KG+ + V + + N L+ E LAE N + L +P
Sbjct: 35 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPY 89
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
+V+++G C E + +LV E G L +L + + I ++ + G+ +L E
Sbjct: 90 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--ELVHQVSMGMKYLEES 146
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTY--GYAAPEYV 318
++RD N+LL + AK+SDFGL+K D + + + G + + APE +
Sbjct: 147 N---FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWPVKWYAPECI 202
Query: 319 MTGHLTSKSDVYSFGVVLLEMLT 341
+SKSDV+SFGV++ E +
Sbjct: 203 NYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
+G+G G V+ + TG VA++ +N + + E+ + +PN
Sbjct: 28 IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHL----FRKGSLPLPWSIRMKIALGAAKGLAF 256
+V + + D+ +V E++ GSL + + +G + + + L F
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-------AVCRECLQALEF 131
Query: 257 LHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGL-AKDAPEDGKTHVSTRVMGTYGYAAP 315
LH VI+RD K+ NILL D + KL+DFG A+ PE K + ++GT + AP
Sbjct: 132 LHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSEMVGTPYWMAP 185
Query: 316 EYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
E V K D++S G++ +EM+ G
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 14/203 (6%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V KG+ + V + + N L+ E LAE N + L +P
Sbjct: 25 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPY 79
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
+V+++G C E + +LV E G L +L + + I ++ + G+ +L E
Sbjct: 80 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--ELVHQVSMGMKYLEE- 135
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTY--GYAAPEYV 318
++RD N+LL + AK+SDFGL+K D + + + G + + APE +
Sbjct: 136 --SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWPVKWYAPECI 192
Query: 319 MTGHLTSKSDVYSFGVVLLEMLT 341
+SKSDV+SFGV++ E +
Sbjct: 193 NYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLLHP 199
LG G FG V +G + VA+K L + +E + E + L +P
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQ-------IDVAIKVLKQGTEKADTEEMMREAQIMHQLDNP 70
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
+V+L+G C + + +LV E G L L K +P S ++ + G+ +L E
Sbjct: 71 YIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKRE-EIPVSNVAELLHQVSMGMKYLEE 128
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTY--GYAAPEY 317
K ++RD N+LL + AK+SDFGL+K D ++ + R G + + APE
Sbjct: 129 ---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD-DSYYTARSAGKWPLKWYAPEC 184
Query: 318 VMTGHLTSKSDVYSFGVVLLEMLT 341
+ +S+SDV+S+GV + E L+
Sbjct: 185 INFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 14/203 (6%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V KG+ + V + + N L+ E LAE N + L +P
Sbjct: 19 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPY 73
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
+V+++G C E + +LV E G L +L + + I ++ + G+ +L E
Sbjct: 74 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--ELVHQVSMGMKYLEE- 129
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTY--GYAAPEYV 318
++RD N+LL + AK+SDFGL+K D + + + G + + APE +
Sbjct: 130 --SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWPVKWYAPECI 186
Query: 319 MTGHLTSKSDVYSFGVVLLEMLT 341
+SKSDV+SFGV++ E +
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 14/203 (6%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V KG+ + V + + N L+ E LAE N + L +P
Sbjct: 13 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPY 67
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
+V+++G C E + +LV E G L +L + + I ++ + G+ +L E
Sbjct: 68 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--ELVHQVSMGMKYLEE- 123
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTY--GYAAPEYV 318
++RD N+LL + AK+SDFGL+K D + + + G + + APE +
Sbjct: 124 --SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWPVKWYAPECI 180
Query: 319 MTGHLTSKSDVYSFGVVLLEMLT 341
+SKSDV+SFGV++ E +
Sbjct: 181 NYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 105/238 (44%), Gaps = 25/238 (10%)
Query: 127 DLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGL---QGH 183
++ L +F ++G GGFG V+ K TG A+K L+ + QG
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQGE 233
Query: 184 KEWLAEVNFLGNLLHPN--LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPW 240
L E L + + + + Y +L + + M G L HL + G
Sbjct: 234 TLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS--- 290
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT 300
+ AA+ + L + V+YRD K +NILLD + ++SD GLA D + K
Sbjct: 291 --EADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-KP 347
Query: 301 HVSTRVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL 357
H S +GT+GY APE + G S +D +S G +L ++L G +++ +H +
Sbjct: 348 HAS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 105/238 (44%), Gaps = 25/238 (10%)
Query: 127 DLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGL---QGH 183
++ L +F ++G GGFG V+ K TG A+K L+ + QG
Sbjct: 182 NIHLTMNDFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQGE 232
Query: 184 KEWLAEVNFLGNLLHPN--LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPW 240
L E L + + + + Y +L + + M G L HL + G
Sbjct: 233 TLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS--- 289
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT 300
+ AA+ + L + V+YRD K +NILLD + ++SD GLA D + K
Sbjct: 290 --EADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-KP 346
Query: 301 HVSTRVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL 357
H S +GT+GY APE + G S +D +S G +L ++L G +++ +H +
Sbjct: 347 HAS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 401
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 12/218 (5%)
Query: 124 MFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH 183
M D+K + + LGEG F V+K + T + + + ++ DG+ +
Sbjct: 1 MALDVKSRAKRYEKLDFLGEGQFATVYKA--RDKNTNQIVAIKKIKLGHRSEAKDGI--N 56
Query: 184 KEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIR 243
+ L E+ L L HPN++ L+ LV++FM LE + + SL L S
Sbjct: 57 RTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEV-IIKDNSLVLTPSHI 114
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVS 303
L +GL +LH+ +++RD K +N+LLD + KL+DFGLAK + +
Sbjct: 115 KAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXH 171
Query: 304 TRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEML 340
V T Y APE + + D+++ G +L E+L
Sbjct: 172 QVV--TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
+G+G G V+ + TG VA++ +N + + E+ + +PN
Sbjct: 29 IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 79
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHL----FRKGSLPLPWSIRMKIALGAAKGLAF 256
+V + + D+ +V E++ GSL + + +G + + + L F
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-------AVCRECLQALEF 132
Query: 257 LHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGL-AKDAPEDGKTHVSTRVMGTYGYAAP 315
LH VI+RD K+ NILL D + KL+DFG A+ PE K + ++GT + AP
Sbjct: 133 LHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAP 186
Query: 316 EYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
E V K D++S G++ +EM+ G
Sbjct: 187 EVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 94/216 (43%), Gaps = 28/216 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGNLLHP 199
LG GGFG V + W+ ++ TG VA+K + ++E W E+ + L HP
Sbjct: 23 LGTGGFGYVLR-WIHQD--------TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 73
Query: 200 NLVKL------VGYCIEDDQRLLVYEFMPRGSLENHL--FRKGSLPLPWSIRMKIALGAA 251
N+V + +D LL E+ G L +L F IR ++ +
Sbjct: 74 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DIS 132
Query: 252 KGLAFLHEEAEKPVIYRDFKTSNILLD---ADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
L +LHE +I+RD K NI+L K+ D G AK E + + T +G
Sbjct: 133 SALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK---ELDQGELCTEFVG 186
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRR 344
T Y APE + T D +SFG + E +TG R
Sbjct: 187 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
+G+G G V+ + TG VA++ +N + + E+ + +PN
Sbjct: 28 IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHL----FRKGSLPLPWSIRMKIALGAAKGLAF 256
+V + + D+ +V E++ GSL + + +G + + + L F
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-------AVCRECLQALEF 131
Query: 257 LHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGL-AKDAPEDGKTHVSTRVMGTYGYAAP 315
LH VI+RD K+ NILL D + KL+DFG A+ PE K + ++GT + AP
Sbjct: 132 LHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAP 185
Query: 316 EYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
E V K D++S G++ +EM+ G
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
+G+G G V+ + TG VA++ +N + + E+ + +PN
Sbjct: 28 IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHL----FRKGSLPLPWSIRMKIALGAAKGLAF 256
+V + + D+ +V E++ GSL + + +G + + + L F
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-------AVCRECLQALEF 131
Query: 257 LHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGL-AKDAPEDGKTHVSTRVMGTYGYAAP 315
LH VI+RD K+ NILL D + KL+DFG A+ PE K + ++GT + AP
Sbjct: 132 LHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAP 185
Query: 316 EYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
E V K D++S G++ +EM+ G
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 105/238 (44%), Gaps = 25/238 (10%)
Query: 127 DLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGL---QGH 183
++ L +F ++G GGFG V+ K TG A+K L+ + QG
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQGE 233
Query: 184 KEWLAEVNFLGNLLHPN--LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPW 240
L E L + + + + Y +L + + M G L HL + G
Sbjct: 234 TLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS--- 290
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT 300
+ AA+ + L + V+YRD K +NILLD + ++SD GLA D + K
Sbjct: 291 --EADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-KP 347
Query: 301 HVSTRVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL 357
H S +GT+GY APE + G S +D +S G +L ++L G +++ +H +
Sbjct: 348 HAS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 105/238 (44%), Gaps = 25/238 (10%)
Query: 127 DLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGL---QGH 183
++ L +F ++G GGFG V+ K TG A+K L+ + QG
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQGE 233
Query: 184 KEWLAEVNFLGNLLHPN--LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPW 240
L E L + + + + Y +L + + M G L HL + G
Sbjct: 234 TLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS--- 290
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT 300
+ AA+ + L + V+YRD K +NILLD + ++SD GLA D + K
Sbjct: 291 --EADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-KP 347
Query: 301 HVSTRVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL 357
H S +GT+GY APE + G S +D +S G +L ++L G +++ +H +
Sbjct: 348 HAS---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLL-HP 199
LGEG +G V V T VAVK ++ E + + + +L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+ +RD K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 320 TGHLTSK-SDVYSFGVVLLEMLTGRRSMDK 348
++ DV+S G+VL ML G D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 94/216 (43%), Gaps = 28/216 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGNLLHP 199
LG GGFG V + W+ ++ TG VA+K + ++E W E+ + L HP
Sbjct: 22 LGTGGFGYVLR-WIHQD--------TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 72
Query: 200 NLVKL------VGYCIEDDQRLLVYEFMPRGSLENHL--FRKGSLPLPWSIRMKIALGAA 251
N+V + +D LL E+ G L +L F IR ++ +
Sbjct: 73 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DIS 131
Query: 252 KGLAFLHEEAEKPVIYRDFKTSNILLD---ADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
L +LHE +I+RD K NI+L K+ D G AK E + + T +G
Sbjct: 132 SALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK---ELDQGELCTEFVG 185
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRR 344
T Y APE + T D +SFG + E +TG R
Sbjct: 186 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 14/203 (6%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V KG+ + V + + N L+ E LAE N + L +P
Sbjct: 15 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPY 69
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
+V+++G C E + +LV E G L +L + + I ++ + G+ +L E
Sbjct: 70 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--ELVHQVSMGMKYLEE- 125
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTY--GYAAPEYV 318
++RD N+LL + AK+SDFGL+K D + + + G + + APE +
Sbjct: 126 --SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWPVKWYAPECI 182
Query: 319 MTGHLTSKSDVYSFGVVLLEMLT 341
+SKSDV+SFGV++ E +
Sbjct: 183 NYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 131/303 (43%), Gaps = 40/303 (13%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEVNFLGNLLHP 199
+G+G FG VFKG +N T V VA+K ++ + ++ E+ L
Sbjct: 31 IGKGSFGEVFKGI--DNRTQQV-------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSS 81
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSL-PLPWSIRMKIALGAAKGLAFLH 258
+ K G ++ + ++ E++ GS + L R G + +K L KGL +LH
Sbjct: 82 YVTKYYGSYLKGSKLWIIMEYLGGGSALD-LLRAGPFDEFQIATMLKEIL---KGLDYLH 137
Query: 259 EEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYV 318
E + I+RD K +N+LL + KL+DFG+A D + +T V GT + APE +
Sbjct: 138 SEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQL-TDTQIKRNTFV-GTPFWMAPEVI 192
Query: 319 MTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLDPR 378
SK+D++S G+ +E+ G P L+ P P
Sbjct: 193 QQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP-------------PT 239
Query: 379 LEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPLQNLKDMASSSYYFQTMQAD 438
L G F ++ + CL++DP RP E+ LK +K+ +SY + +
Sbjct: 240 LVGDF----TKSFKEFIDACLNKDPSFRPTAKEL---LKHKFIVKNSKKTSYLTELIDRF 292
Query: 439 NTW 441
W
Sbjct: 293 KRW 295
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLL-HP 199
LGEG +G V V T VAVK ++ E + + + +L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+ +RD K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 320 TGHLTSK-SDVYSFGVVLLEMLTGRRSMDK 348
++ DV+S G+VL ML G D+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKT-LNHDGLQGHKEWLAEVNFLGNLLHP 199
LG+G FG V+ ++ K L V KT L G++ + EV +L HP
Sbjct: 20 LGKGKFGNVYLARERQS-----KFILALKVLFKTQLEKAGVE--HQLRREVEIQSHLRHP 72
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
N+++L GY + + L+ E+ P G++ L + + L A L++ H
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL--ANALSYCHS 130
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
K VI+RD K N+LL ++ K++DFG + AP + T + GT Y PE +
Sbjct: 131 ---KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIE 183
Query: 320 TGHLTSKSDVYSFGVVLLEMLTG 342
K D++S GV+ E L G
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 116/280 (41%), Gaps = 44/280 (15%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
+GEG G V V +G VAVK ++ Q + EV + + H N
Sbjct: 82 IGEGSTGIVCIATVRSSGK---------LVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 132
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMK------IALGAAKGL 254
+V++ + D+ +V EF+ G+L + + RM + L + L
Sbjct: 133 VVEMYNSYLVGDELWVVMEFLEGGALTD---------IVTHTRMNEEQIAAVCLAVLQAL 183
Query: 255 AFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
+ LH + VI+RD K+ +ILL D KLSDFG ++ ++GT + A
Sbjct: 184 SVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMA 238
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRL 374
PE + + D++S G++++EM+ G + P L +
Sbjct: 239 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPY-------------FNEPPLKAMKMIRDN 285
Query: 375 LDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
L PRL+ + S K + L RDP R +E+++
Sbjct: 286 LPPRLKNLHKVSPSLKG--FLDRLLVRDPAQRATAAELLK 323
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 37/212 (17%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
+GEG G V + TG VAVK ++ Q + EV + + H N
Sbjct: 53 IGEGSTGIV---------CIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDN 103
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMK------IALGAAKGL 254
+V + + D+ +V EF+ G+L + + RM + L + L
Sbjct: 104 VVDMYSSYLVGDELWVVMEFLEGGALTD---------IVTHTRMNEEQIATVCLSVLRAL 154
Query: 255 AFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFG----LAKDAPEDGKTHVSTRVMGTY 310
++LH + VI+RD K+ +ILL +D KLSDFG ++K+ P+ ++GT
Sbjct: 155 SYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK------RKXLVGTP 205
Query: 311 GYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
+ APE + ++ D++S G++++EM+ G
Sbjct: 206 YWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 89/209 (42%), Gaps = 19/209 (9%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
+LG GGFG VF ++ G K + G K+ LA+V H
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HS 244
Query: 200 NLVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGS----LPLPWSIRMKIALGAAKGL 254
+ + Y E L LV M G + H++ P +I + GL
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI--VSGL 302
Query: 255 AFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
LH+ + +IYRD K N+LLD D N ++SD GLA + + G+T GT G+ A
Sbjct: 303 EHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-KAGQTKTKGYA-GTPGFMA 357
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
PE ++ D ++ GV L EM+ R
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 134/312 (42%), Gaps = 40/312 (12%)
Query: 112 EELKVASQLRKFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVA 171
+ L ++ +L++ D+ + + F +LG+G FG V + +++ + G+ + VA
Sbjct: 3 DSLGISDELKE-KLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQ------EDGSFVKVA 55
Query: 172 VKTLNHDGLQGH--KEWLAEVNFLGNLLHPNLVKLVGYCIEDDQR------LLVYEFMPR 223
VK L D + +E+L E + HP++ KLVG + + +++ FM
Sbjct: 56 VKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKH 115
Query: 224 GSLENHLF--RKGSLP--LPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDA 279
G L L R G P LP ++ + A G+ +L + + I+RD N +L
Sbjct: 116 GDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAE 172
Query: 280 DYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEM 339
D ++DFGL++ + A E + T SDV++FGV + E+
Sbjct: 173 DMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEI 232
Query: 340 LTGRRSMDKNRPNGE-HNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQC 398
+T ++ N E +N + +G RL P + ++ L QC
Sbjct: 233 MTRGQTPYAGIENAEIYNYL------IGGN----RLKQPP-------ECMEEVYDLMYQC 275
Query: 399 LSRDPKARPRMS 410
S DPK RP +
Sbjct: 276 WSADPKQRPSFT 287
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 89/209 (42%), Gaps = 19/209 (9%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
+LG GGFG VF ++ G K + G K+ LA+V H
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HS 244
Query: 200 NLVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGS----LPLPWSIRMKIALGAAKGL 254
+ + Y E L LV M G + H++ P +I + GL
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI--VSGL 302
Query: 255 AFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
LH+ + +IYRD K N+LLD D N ++SD GLA + + G+T GT G+ A
Sbjct: 303 EHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-KAGQTKTKGYA-GTPGFMA 357
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
PE ++ D ++ GV L EM+ R
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V KG+ + V + + N L+ E LAE N + L +P
Sbjct: 19 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPY 73
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
+V+++G C E + +LV E G L +L + + I ++ + G+ +L E
Sbjct: 74 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--ELVHQVSMGMKYLEE- 129
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTH-VSTRVMGTYGYAAPEYVM 319
++RD N+LL + AK+SDFGL+K D + T + APE +
Sbjct: 130 --SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECIN 187
Query: 320 TGHLTSKSDVYSFGVVLLEMLT 341
+SKSDV+SFGV++ E +
Sbjct: 188 YYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 89/209 (42%), Gaps = 19/209 (9%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
+LG GGFG VF ++ G K + G K+ LA+V H
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HS 244
Query: 200 NLVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGS----LPLPWSIRMKIALGAAKGL 254
+ + Y E L LV M G + H++ P +I + GL
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI--VSGL 302
Query: 255 AFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
LH+ + +IYRD K N+LLD D N ++SD GLA + + G+T GT G+ A
Sbjct: 303 EHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-KAGQTKTKGYA-GTPGFMA 357
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
PE ++ D ++ GV L EM+ R
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLL-HP 199
LGEG +G V V T VAVK ++ E + + + +L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+ +RD K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 320 TGHLTSK-SDVYSFGVVLLEMLTGRRSMDK 348
++ DV+S G+VL ML G D+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLL-HP 199
LGEG +G V V T VAVK ++ E + + + +L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+ +RD K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 320 TGHLTSK-SDVYSFGVVLLEMLTGRRSMDK 348
++ DV+S G+VL ML G D+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLL-HP 199
LGEG +G V V T VAVK ++ E + + + +L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+ +RD K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 320 TGHLTSK-SDVYSFGVVLLEMLTGRRSMDK 348
++ DV+S G+VL ML G D+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 89/209 (42%), Gaps = 19/209 (9%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
+LG GGFG VF ++ G K + G K+ LA+V H
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HS 244
Query: 200 NLVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGS----LPLPWSIRMKIALGAAKGL 254
+ + Y E L LV M G + H++ P +I + GL
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI--VSGL 302
Query: 255 AFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
LH+ + +IYRD K N+LLD D N ++SD GLA + + G+T GT G+ A
Sbjct: 303 EHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-KAGQTKTKGYA-GTPGFMA 357
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
PE ++ D ++ GV L EM+ R
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLL-HP 199
LGEG +G V V T VAVK ++ E + + + +L H
Sbjct: 13 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 121
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+ +RD K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 122 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 178
Query: 320 TGHLTSK-SDVYSFGVVLLEMLTGRRSMDK 348
++ DV+S G+VL ML G D+
Sbjct: 179 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 208
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLL-HP 199
LGEG +G V V T VAVK ++ E + + + +L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+ +RD K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 320 TGHLTSK-SDVYSFGVVLLEMLTGRRSMDK 348
++ DV+S G+VL ML G D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLL-HP 199
LGEG +G V V T VAVK ++ E + + + +L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+ +RD K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 320 TGHLTSK-SDVYSFGVVLLEMLTGRRSMDK 348
++ DV+S G+VL ML G D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLL-HP 199
LGEG +G V V T VAVK ++ E + + + +L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+ +RD K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 320 TGHLTSK-SDVYSFGVVLLEMLTGRRSMDK 348
++ DV+S G+VL ML G D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLL-HP 199
LGEG +G V V T VAVK ++ E + + + +L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+ +RD K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 320 TGHLTSK-SDVYSFGVVLLEMLTGRRSMDK 348
++ DV+S G+VL ML G D+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 88/191 (46%), Gaps = 23/191 (12%)
Query: 166 TGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPR 223
TG VA+K ++ L ++ EV + L HPN+VKL + L+ E+
Sbjct: 36 TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG 95
Query: 224 GSLENHLFRKGSLPLPWSIRMKIALGAAK------GLAFLHEEAEKPVIYRDFKTSNILL 277
G + ++L G RMK +K + + H+ K +++RD K N+LL
Sbjct: 96 GEVFDYLVAHG--------RMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLL 144
Query: 278 DADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTS-KSDVYSFGVVL 336
DAD N K++DFG + + GK G+ YAAPE + DV+S GV+L
Sbjct: 145 DADMNIKIADFGFSNEFTVGGKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 201
Query: 337 LEMLTGRRSMD 347
+++G D
Sbjct: 202 YTLVSGSLPFD 212
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLL-HP 199
LGEG +G V V T VAVK ++ E + + + +L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+ +RD K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 320 TGHLTSK-SDVYSFGVVLLEMLTGRRSMDK 348
++ DV+S G+VL ML G D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLL-HP 199
LGEG +G V V T VAVK ++ E + + + +L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+ +RD K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 320 TGHLTSK-SDVYSFGVVLLEMLTGRRSMDK 348
++ DV+S G+VL ML G D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 98/227 (43%), Gaps = 40/227 (17%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPG----TGLTVAVKTLNHDGLQ--GHKEWL 187
N+R + +G+G F A VK TG VAVK ++ L ++
Sbjct: 16 NYRLQKTIGKGNF-------------AKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLF 62
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
EV + L HPN+VKL + LV E+ G + ++L G RMK
Sbjct: 63 REVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG--------RMKEK 114
Query: 248 LGAAK------GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTH 301
AK + + H+ K +++RD K N+LLD D N K++DFG + + K
Sbjct: 115 EARAKFRQIVSAVQYCHQ---KYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLD 171
Query: 302 VSTRVMGTYGYAAPEYVMTGHLTS-KSDVYSFGVVLLEMLTGRRSMD 347
G+ YAAPE + DV+S GV+L +++G D
Sbjct: 172 T---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLL-HP 199
LGEG +G V V T VAVK ++ E + + + +L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+ +RD K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 180
Query: 320 TGHLTSK-SDVYSFGVVLLEMLTGRRSMDK 348
++ DV+S G+VL ML G D+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLL-HP 199
LGEG +G V V T VAVK ++ E + + + +L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+ +RD K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 320 TGHLTSK-SDVYSFGVVLLEMLTGRRSMDK 348
++ DV+S G+VL ML G D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 116/280 (41%), Gaps = 44/280 (15%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
+GEG G V V +G VAVK ++ Q + EV + + H N
Sbjct: 37 IGEGSTGIVCIATVRSSGK---------LVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 87
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMK------IALGAAKGL 254
+V++ + D+ +V EF+ G+L + + RM + L + L
Sbjct: 88 VVEMYNSYLVGDELWVVMEFLEGGALTD---------IVTHTRMNEEQIAAVCLAVLQAL 138
Query: 255 AFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
+ LH + VI+RD K+ +ILL D KLSDFG ++ ++GT + A
Sbjct: 139 SVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMA 193
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRL 374
PE + + D++S G++++EM+ G + P L +
Sbjct: 194 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPY-------------FNEPPLKAMKMIRDN 240
Query: 375 LDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
L PRL+ + S K + L RDP R +E+++
Sbjct: 241 LPPRLKNLHKVSPSLKG--FLDRLLVRDPAQRATAAELLK 278
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLL-HP 199
LGEG +G V V T VAVK ++ E + + + +L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+ +RD K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 320 TGHLTSK-SDVYSFGVVLLEMLTGRRSMDK 348
++ DV+S G+VL ML G D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 116/280 (41%), Gaps = 44/280 (15%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
+GEG G V V +G VAVK ++ Q + EV + + H N
Sbjct: 39 IGEGSTGIVCIATVRSSGK---------LVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 89
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMK------IALGAAKGL 254
+V++ + D+ +V EF+ G+L + + RM + L + L
Sbjct: 90 VVEMYNSYLVGDELWVVMEFLEGGALTD---------IVTHTRMNEEQIAAVCLAVLQAL 140
Query: 255 AFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
+ LH + VI+RD K+ +ILL D KLSDFG ++ ++GT + A
Sbjct: 141 SVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMA 195
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRL 374
PE + + D++S G++++EM+ G + P L +
Sbjct: 196 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPY-------------FNEPPLKAMKMIRDN 242
Query: 375 LDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
L PRL+ + S K + L RDP R +E+++
Sbjct: 243 LPPRLKNLHKVSPSLKG--FLDRLLVRDPAQRATAAELLK 280
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 16/204 (7%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLLHP 199
LG G FG V +G + VA+K L + +E + E + L +P
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQ-------IDVAIKVLKQGTEKADTEEMMREAQIMHQLDNP 396
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
+V+L+G C + + +LV E G L L K +P S ++ + G+ +L E
Sbjct: 397 YIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKRE-EIPVSNVAELLHQVSMGMKYLEE 454
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTY--GYAAPEY 317
K ++R+ N+LL + AK+SDFGL+K D ++ + R G + + APE
Sbjct: 455 ---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGAD-DSYYTARSAGKWPLKWYAPEC 510
Query: 318 VMTGHLTSKSDVYSFGVVLLEMLT 341
+ +S+SDV+S+GV + E L+
Sbjct: 511 INFRKFSSRSDVWSYGVTMWEALS 534
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGNLLHP 199
LGEG +G V V T VAVK ++ + + E+ L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+ +RD K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 320 TGHLTSK-SDVYSFGVVLLEMLTGRRSMDK 348
++ DV+S G+VL ML G D+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 103/232 (44%), Gaps = 38/232 (16%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNF 192
+F P LG GGFG VF+ + + A+K + + +E + EV
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDC---------NYAIKRIRLPNRELAREKVMREVKA 56
Query: 193 LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSL--ENHLFRKGSLPLPW---------- 240
L L HP +V+ +E + + P+ L + L RK +L W
Sbjct: 57 LAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLK-DWMNGRCTIEER 115
Query: 241 --SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGL--AKDAPE 296
S+ + I L A+ + FLH K +++RD K SNI D K+ DFGL A D E
Sbjct: 116 ERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE 172
Query: 297 DGKTHVS--------TRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEML 340
+ +T ++ T +GT Y +PE + + K D++S G++L E+L
Sbjct: 173 EEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLL-HP 199
LGEG +G V V T VAVK ++ E + + + +L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+ +RD K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 320 TGHLTSK-SDVYSFGVVLLEMLTGRRSMDK 348
++ DV+S G+VL ML G D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLL-HP 199
LGEG +G V V T VAVK ++ E + + + +L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+ +RD K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 320 TGHLTSK-SDVYSFGVVLLEMLTGRRSMDK 348
++ DV+S G+VL ML G D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 87/191 (45%), Gaps = 23/191 (12%)
Query: 166 TGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPR 223
TG VA+K ++ L ++ EV + L HPN+VKL + L+ E+
Sbjct: 39 TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG 98
Query: 224 GSLENHLFRKGSLPLPWSIRMKIALGAAK------GLAFLHEEAEKPVIYRDFKTSNILL 277
G + ++L G RMK +K + + H+ K +++RD K N+LL
Sbjct: 99 GEVFDYLVAHG--------RMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLL 147
Query: 278 DADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTS-KSDVYSFGVVL 336
DAD N K++DFG + + GK G YAAPE + DV+S GV+L
Sbjct: 148 DADMNIKIADFGFSNEFTVGGKLDA---FCGAPPYAAPELFQGKKYDGPEVDVWSLGVIL 204
Query: 337 LEMLTGRRSMD 347
+++G D
Sbjct: 205 YTLVSGSLPFD 215
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 87/191 (45%), Gaps = 23/191 (12%)
Query: 166 TGLTVAVKTLNHDGLQGH--KEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPR 223
TG VAVK ++ L ++ EV + L HPN+VKL + LV E+
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 224 GSLENHLFRKGSLPLPWSIRMKIALGAAK------GLAFLHEEAEKPVIYRDFKTSNILL 277
G + ++L G RMK AK + + H+ K +++RD K N+LL
Sbjct: 98 GEVFDYLVAHG--------RMKEKEARAKFRQIVSAVQYCHQ---KFIVHRDLKAENLLL 146
Query: 278 DADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTS-KSDVYSFGVVL 336
DAD N K++DFG + + K G+ YAAPE + DV+S GV+L
Sbjct: 147 DADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 337 LEMLTGRRSMD 347
+++G D
Sbjct: 204 YTLVSGSLPFD 214
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 6/138 (4%)
Query: 216 LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNI 275
+V E++ +L + + +G P+ +++ A + L F H+ +I+RD K +NI
Sbjct: 93 IVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANI 147
Query: 276 LLDADYNAKLSDFGLAKDAPEDGKTHVSTR-VMGTYGYAAPEYVMTGHLTSKSDVYSFGV 334
++ A K+ DFG+A+ + G + T V+GT Y +PE + ++SDVYS G
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 335 VLLEMLTGRRSMDKNRPN 352
VL E+LTG + P+
Sbjct: 208 VLYEVLTGEPPFTGDSPD 225
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLL-HP 199
LGEG +G V V T VAVK ++ E + + + +L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+ +RD K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 320 TGHLTSK-SDVYSFGVVLLEMLTGRRSMDK 348
++ DV+S G+VL ML G D+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 118/279 (42%), Gaps = 37/279 (13%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGNLLHP 199
LG G FG V VEE + GL +KT+N D Q E + AE+ L +L HP
Sbjct: 30 LGSGAFGDV--HLVEERSS-------GLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHP 80
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSL--PLPWSIRMKIALGAAKGLAFL 257
N++K+ + +V E G L + + L ++ LA+
Sbjct: 81 NIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140
Query: 258 HEEAEKPVIYRDFKTSNILL-DADYNA--KLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
H + V+++D K NIL D ++ K+ DFGLA+ D ST GT Y A
Sbjct: 141 HSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTALYMA 194
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRL 374
PE V +T K D++S GVV+ +LTG + P+ + R
Sbjct: 195 PE-VFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVE---CRP 250
Query: 375 LDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVV 413
L P +A L Q L++DP+ RP ++V+
Sbjct: 251 LTP------------QAVDLLKQMLTKDPERRPSAAQVL 277
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 87/191 (45%), Gaps = 23/191 (12%)
Query: 166 TGLTVAVKTLNHDGLQGH--KEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPR 223
TG VAVK ++ L ++ EV + L HPN+VKL + LV E+
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 224 GSLENHLFRKGSLPLPWSIRMKIALGAAK------GLAFLHEEAEKPVIYRDFKTSNILL 277
G + ++L G RMK AK + + H+ K +++RD K N+LL
Sbjct: 98 GEVFDYLVAHG--------RMKEKEARAKFRQIVSAVQYCHQ---KFIVHRDLKAENLLL 146
Query: 278 DADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTS-KSDVYSFGVVL 336
DAD N K++DFG + + K G+ YAAPE + DV+S GV+L
Sbjct: 147 DADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 337 LEMLTGRRSMD 347
+++G D
Sbjct: 204 YTLVSGSLPFD 214
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLL-HP 199
LGEG +G V V T VAVK ++ E + + + +L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+ +RD K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 320 TGHLTSK-SDVYSFGVVLLEMLTGRRSMDK 348
++ DV+S G+VL ML G D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 17/192 (8%)
Query: 170 VAVKTLNHDGLQGHKEWLA---EVNFLGNLLHPNLVKLVGYCIEDDQR------LLVYEF 220
VAVK L D + +L E L HP +V + Y + + +V E+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YATGEAETPAGPLPYIVMEY 97
Query: 221 MPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDAD 280
+ +L + + +G P+ +++ A + L F H+ +I+RD K +NI++ A
Sbjct: 98 VDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISAT 152
Query: 281 YNAKLSDFGLAKDAPEDGKTHVSTR-VMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEM 339
K+ DFG+A+ + G + T V+GT Y +PE + ++SDVYS G VL E+
Sbjct: 153 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
Query: 340 LTGRRSMDKNRP 351
LTG + P
Sbjct: 213 LTGEPPFTGDSP 224
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 6/137 (4%)
Query: 216 LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNI 275
+V E++ +L + + +G P+ +++ A + L F H+ +I+RD K +NI
Sbjct: 93 IVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANI 147
Query: 276 LLDADYNAKLSDFGLAKDAPEDGKTHVSTR-VMGTYGYAAPEYVMTGHLTSKSDVYSFGV 334
L+ A K+ DFG+A+ + G + T V+GT Y +PE + ++SDVYS G
Sbjct: 148 LISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 335 VLLEMLTGRRSMDKNRP 351
VL E+LTG + P
Sbjct: 208 VLYEVLTGEPPFTGDSP 224
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 120/286 (41%), Gaps = 53/286 (18%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGNLLH 198
+GEG FG E+G V +K +N + +E EV L N+ H
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYV---------IKEINISRMSSKEREESRREVAVLANMKH 82
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSL-------ENHLFRKGSLPLPWSIRMKIALGAA 251
PN+V+ E+ +V ++ G L + LF++ + L W +++ +AL
Sbjct: 83 PNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI-LDWFVQICLALKHV 141
Query: 252 KGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYG 311
++ +++RD K+ NI L D +L DFG+A+ + ++ +GT
Sbjct: 142 H---------DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL--NSTVELARACIGTPY 190
Query: 312 YAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRF 371
Y +PE +KSD+++ G VL E+ T + + + NLV
Sbjct: 191 YLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFE---AGSMKNLVLKI---------- 237
Query: 372 YRLLDPRLEGHF---SIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
+ G F S+ S L +Q R+P+ RP ++ ++E
Sbjct: 238 -------ISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 116/280 (41%), Gaps = 44/280 (15%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
+GEG G V V +G VAVK ++ Q + EV + + H N
Sbjct: 28 IGEGSTGIVCIATVRSSGK---------LVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 78
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMK------IALGAAKGL 254
+V++ + D+ +V EF+ G+L + + RM + L + L
Sbjct: 79 VVEMYNSYLVGDELWVVMEFLEGGALTD---------IVTHTRMNEEQIAAVCLAVLQAL 129
Query: 255 AFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
+ LH + VI+RD K+ +ILL D KLSDFG ++ ++GT + A
Sbjct: 130 SVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMA 184
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRL 374
PE + + D++S G++++EM+ G + P L +
Sbjct: 185 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPY-------------FNEPPLKAMKMIRDN 231
Query: 375 LDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
L PRL+ + S K + L RDP R +E+++
Sbjct: 232 LPPRLKNLHKVSPSLKG--FLDRLLVRDPAQRATAAELLK 269
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 190
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 38 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 88
Query: 191 NFLGNLLHPNLVKLVGYCIEDDQRLLV-YEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
+ + L HP VKL +C +DD++L + G L ++ + GS + +
Sbjct: 89 DVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 147
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+A L +LH K +I+RD K NILL+ D + +++DFG AK + K + +GT
Sbjct: 148 SA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
Y +PE + SD+++ G ++ +++ G
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 86/191 (45%), Gaps = 23/191 (12%)
Query: 166 TGLTVAVKTLNHDGLQGH--KEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPR 223
TG VAVK ++ L ++ EV + L HPN+VKL + LV E+
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 224 GSLENHLFRKGSLPLPWSIRMKIALGAAK------GLAFLHEEAEKPVIYRDFKTSNILL 277
G + ++L G RMK AK + + H+ K +++RD K N+LL
Sbjct: 98 GEVFDYLVAHG--------RMKEKEARAKFRQIVSAVQYCHQ---KFIVHRDLKAENLLL 146
Query: 278 DADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTS-KSDVYSFGVVL 336
DAD N K++DFG + + K G YAAPE + DV+S GV+L
Sbjct: 147 DADMNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 337 LEMLTGRRSMD 347
+++G D
Sbjct: 204 YTLVSGSLPFD 214
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
+G+G G V+ + TG VA++ +N + + E+ + +PN
Sbjct: 29 IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 79
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHL----FRKGSLPLPWSIRMKIALGAAKGLAF 256
+V + + D+ +V E++ GSL + + +G + + + L F
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-------AVCRECLQALEF 132
Query: 257 LHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGL-AKDAPEDGKTHVSTRVMGTYGYAAP 315
LH VI+R+ K+ NILL D + KL+DFG A+ PE K + ++GT + AP
Sbjct: 133 LHS---NQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAP 186
Query: 316 EYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
E V K D++S G++ +EM+ G
Sbjct: 187 EVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 116/280 (41%), Gaps = 44/280 (15%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
+GEG G V V +G VAVK ++ Q + EV + + H N
Sbjct: 32 IGEGSTGIVCIATVRSSGK---------LVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 82
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMK------IALGAAKGL 254
+V++ + D+ +V EF+ G+L + + RM + L + L
Sbjct: 83 VVEMYNSYLVGDELWVVMEFLEGGALTD---------IVTHTRMNEEQIAAVCLAVLQAL 133
Query: 255 AFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
+ LH + VI+RD K+ +ILL D KLSDFG ++ ++GT + A
Sbjct: 134 SVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMA 188
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRL 374
PE + + D++S G++++EM+ G + P L +
Sbjct: 189 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPY-------------FNEPPLKAMKMIRDN 235
Query: 375 LDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
L PRL+ + S K + L RDP R +E+++
Sbjct: 236 LPPRLKNLHKVSPSLKG--FLDRLLVRDPAQRATAAELLK 273
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 6/137 (4%)
Query: 216 LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNI 275
+V E++ +L + + +G P+ +++ A + L F H+ +I+RD K +NI
Sbjct: 93 IVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANI 147
Query: 276 LLDADYNAKLSDFGLAKDAPEDGKTHVSTR-VMGTYGYAAPEYVMTGHLTSKSDVYSFGV 334
++ A K+ DFG+A+ + G + T V+GT Y +PE + ++SDVYS G
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 335 VLLEMLTGRRSMDKNRP 351
VL E+LTG + P
Sbjct: 208 VLYEVLTGEPPFTGDSP 224
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 6/137 (4%)
Query: 216 LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNI 275
+V E++ +L + + +G P+ +++ A + L F H+ +I+RD K +NI
Sbjct: 93 IVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANI 147
Query: 276 LLDADYNAKLSDFGLAKDAPEDGKTHVSTR-VMGTYGYAAPEYVMTGHLTSKSDVYSFGV 334
++ A K+ DFG+A+ + G + T V+GT Y +PE + ++SDVYS G
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 335 VLLEMLTGRRSMDKNRP 351
VL E+LTG + P
Sbjct: 208 VLYEVLTGEPPFTGDSP 224
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 87/191 (45%), Gaps = 23/191 (12%)
Query: 166 TGLTVAVKTLNHDGLQGH--KEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPR 223
TG VAV+ ++ L ++ EV + L HPN+VKL + LV E+
Sbjct: 38 TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 224 GSLENHLFRKGSLPLPWSIRMKIALGAAK------GLAFLHEEAEKPVIYRDFKTSNILL 277
G + ++L G RMK AK + + H+ K +++RD K N+LL
Sbjct: 98 GEVFDYLVAHG--------RMKEKEARAKFRQIVSAVQYCHQ---KFIVHRDLKAENLLL 146
Query: 278 DADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTS-KSDVYSFGVVL 336
DAD N K++DFG + + K G+ YAAPE + DV+S GV+L
Sbjct: 147 DADMNIKIADFGFSNEFTFGNKL---DEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 337 LEMLTGRRSMD 347
+++G D
Sbjct: 204 YTLVSGSLPFD 214
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 87/191 (45%), Gaps = 23/191 (12%)
Query: 166 TGLTVAVKTLNHDGLQGH--KEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPR 223
TG VAV+ ++ L ++ EV + L HPN+VKL + LV E+
Sbjct: 38 TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 224 GSLENHLFRKGSLPLPWSIRMKIALGAAK------GLAFLHEEAEKPVIYRDFKTSNILL 277
G + ++L G RMK AK + + H+ K +++RD K N+LL
Sbjct: 98 GEVFDYLVAHG--------RMKEKEARAKFRQIVSAVQYCHQ---KFIVHRDLKAENLLL 146
Query: 278 DADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTS-KSDVYSFGVVL 336
DAD N K++DFG + + K G+ YAAPE + DV+S GV+L
Sbjct: 147 DADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 337 LEMLTGRRSMD 347
+++G D
Sbjct: 204 YTLVSGSLPFD 214
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 17/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKT-LNHDGLQGHKEWLAEVNFLGNLLHP 199
LG+G FG V+ ++ K L V KT L G++ + EV +L HP
Sbjct: 20 LGKGKFGNVYLARERQS-----KFILALKVLFKTQLEKAGVE--HQLRREVEIQSHLRHP 72
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
N+++L GY + + L+ E+ P G++ L + + L A L++ H
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL--ANALSYCHS 130
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
K VI+RD K N+LL ++ K++DFG + AP + + GT Y PE +
Sbjct: 131 ---KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----DTLCGTLDYLPPEMIE 183
Query: 320 TGHLTSKSDVYSFGVVLLEMLTG 342
K D++S GV+ E L G
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 6/137 (4%)
Query: 216 LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNI 275
+V E++ +L + + +G P+ +++ A + L F H+ +I+RD K +NI
Sbjct: 110 IVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANI 164
Query: 276 LLDADYNAKLSDFGLAKDAPEDGKTHVSTR-VMGTYGYAAPEYVMTGHLTSKSDVYSFGV 334
++ A K+ DFG+A+ + G + T V+GT Y +PE + ++SDVYS G
Sbjct: 165 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 224
Query: 335 VLLEMLTGRRSMDKNRP 351
VL E+LTG + P
Sbjct: 225 VLYEVLTGEPPFTGDSP 241
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLL-HP 199
LGEG G V V T VAVK ++ E + + + +L H
Sbjct: 14 LGEGAAGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+ +RD K N+LLD N K+SDFGLA + + + ++ GT Y APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 320 TGHLTSK-SDVYSFGVVLLEMLTGRRSMDK 348
++ DV+S G+VL ML G D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 101/227 (44%), Gaps = 31/227 (13%)
Query: 127 DLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLT--VAVKTLNHDGLQGHK 184
DL++ ++ ++G G FG V V T V L+ +K + +
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEV--QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 120
Query: 185 EWLAEVNFLGNLLHPNLVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPW--- 240
+ +A N P +V+L Y +DD+ L +V E+MP G L N L +P W
Sbjct: 121 DIMAFAN------SPWVVQLF-YAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARF 172
Query: 241 -SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGK 299
+ + +AL A + F+H RD K N+LLD + KL+DFG ++G
Sbjct: 173 YTAEVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 223
Query: 300 THVSTRVMGTYGYAAPEYVMT----GHLTSKSDVYSFGVVLLEMLTG 342
T V GT Y +PE + + G+ + D +S GV L EML G
Sbjct: 224 VRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 127/277 (45%), Gaps = 37/277 (13%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
LG+GGF F+ + + T V G + K+L Q K + E++ +L H
Sbjct: 28 FLGKGGFAKCFE--ISDADTKEVFAGK---IVPKSLLLKPHQREKMSM-EISIHRSLAHQ 81
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLP---WSIRMKIALGAAKGLAF 256
++V G+ ++D +V E R SL R+ +L P + +R +I LG +
Sbjct: 82 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----Y 136
Query: 257 LHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPE 316
LH VI+RD K N+ L+ D K+ DFGLA DG+ + + GT Y APE
Sbjct: 137 LHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPE 191
Query: 317 YVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLD 376
+ + + DV+S G ++ +L G+ P E + ++ +L K+ Y +
Sbjct: 192 VLSKKGHSFEVDVWSIGCIMYTLLVGK-------PPFETSCLKET--YLRIKKNEYSI-- 240
Query: 377 PRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVV 413
P+ H + A L + L DP ARP ++E++
Sbjct: 241 PK---HIN----PVAASLIQKMLQTDPTARPTINELL 270
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 95/187 (50%), Gaps = 14/187 (7%)
Query: 166 TGLTVAVKTLNHDGLQGHK---EWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMP 222
TG VAVK LN ++ + E+ L HP+++KL +V E++
Sbjct: 35 TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94
Query: 223 RGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYN 282
G L +++ + G + + R+ + +A H V++RD K N+LLDA N
Sbjct: 95 GGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM-----VVHRDLKPENVLLDAHMN 149
Query: 283 AKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTS--KSDVYSFGVVLLEML 340
AK++DFGL+ + DG+ ++ G+ YAAPE V++G L + + D++S GV+L +L
Sbjct: 150 AKIADFGLS-NMMSDGEFLRTS--CGSPNYAAPE-VISGRLYAGPEVDIWSCGVILYALL 205
Query: 341 TGRRSMD 347
G D
Sbjct: 206 CGTLPFD 212
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLAEVNFLGNLL 197
+LG+G FG V K T AVK +N + L EV L L
Sbjct: 29 MLGKGSFGEVLKCK---------DRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 198 HPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFL 257
HPN++KL + +V E G L + + ++ + R I G+ ++
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--IIKQVFSGITYM 137
Query: 258 HEEAEKPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
H+ +++RD K NILL++ D + K+ DFGL+ ++ T + R+ GT Y A
Sbjct: 138 HKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRI-GTAYYIA 191
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
PE V+ G K DV+S GV+L +L+G
Sbjct: 192 PE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 136/309 (44%), Gaps = 48/309 (15%)
Query: 144 GGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL--AEVNFLGNLLHPNL 201
G FGCV+K + VAVK +Q + W EV L + H N+
Sbjct: 35 GRFGCVWKAQLLNE-----------YVAVKIFP---IQDKQSWQNEYEVYSLPGMKHENI 80
Query: 202 VKLVGY----CIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFL 257
++ +G D L+ F +GSL + F K ++ + W+ IA A+GLA+L
Sbjct: 81 LQFIGAEKRGTSVDVDLWLITAFHEKGSLSD--FLKANV-VSWNELCHIAETMARGLAYL 137
Query: 258 HEE------AEKPVI-YRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTR-VMGT 309
HE+ KP I +RD K+ N+LL + A ++DFGLA E GK+ T +GT
Sbjct: 138 HEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKF-EAGKSAGDTHGQVGT 196
Query: 310 YGYAAPEYVMTGHLTS------KSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL----VE 359
Y APE V+ G + + D+Y+ G+VL E+ + R + P E+ L
Sbjct: 197 RRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELAS--RCTAADGPVDEYMLPFEEEI 253
Query: 360 WARPHLGDKRR--FYRLLDPRLEGHFSI-KGSQKATQLAAQCLSRDPKARPRMSEVVETL 416
P L D + ++ P L ++ G + +C D +AR V E +
Sbjct: 254 GQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERI 313
Query: 417 KPLQNLKDM 425
+Q L ++
Sbjct: 314 TQMQRLTNI 322
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 127/277 (45%), Gaps = 37/277 (13%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
LG+GGF F+ + + T V G + K+L Q K + E++ +L H
Sbjct: 24 FLGKGGFAKCFE--ISDADTKEVFAGK---IVPKSLLLKPHQREKMSM-EISIHRSLAHQ 77
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLP---WSIRMKIALGAAKGLAF 256
++V G+ ++D +V E R SL R+ +L P + +R +I LG +
Sbjct: 78 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----Y 132
Query: 257 LHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPE 316
LH VI+RD K N+ L+ D K+ DFGLA DG+ + + GT Y APE
Sbjct: 133 LHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPE 187
Query: 317 YVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLD 376
+ + + DV+S G ++ +L G+ P E + ++ +L K+ Y +
Sbjct: 188 VLSKKGHSFEVDVWSIGCIMYTLLVGK-------PPFETSCLKET--YLRIKKNEYSI-- 236
Query: 377 PRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVV 413
P+ H + A L + L DP ARP ++E++
Sbjct: 237 PK---HIN----PVAASLIQKMLQTDPTARPTINELL 266
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 127/277 (45%), Gaps = 37/277 (13%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
LG+GGF F+ + + T V G + K+L Q K + E++ +L H
Sbjct: 24 FLGKGGFAKCFE--ISDADTKEVFAGK---IVPKSLLLKPHQREKMSM-EISIHRSLAHQ 77
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLP---WSIRMKIALGAAKGLAF 256
++V G+ ++D +V E R SL R+ +L P + +R +I LG +
Sbjct: 78 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----Y 132
Query: 257 LHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPE 316
LH VI+RD K N+ L+ D K+ DFGLA DG+ + + GT Y APE
Sbjct: 133 LHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPE 187
Query: 317 YVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLD 376
+ + + DV+S G ++ +L G+ P E + ++ +L K+ Y +
Sbjct: 188 VLSKKGHSFEVDVWSIGCIMYTLLVGK-------PPFETSCLKET--YLRIKKNEYSI-- 236
Query: 377 PRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVV 413
P+ H + A L + L DP ARP ++E++
Sbjct: 237 PK---HIN----PVAASLIQKMLQTDPTARPTINELL 266
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 91/181 (50%), Gaps = 16/181 (8%)
Query: 166 TGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGS 225
+G VAVK ++ Q + EV + + H N+V++ + ++ ++ EF+ G+
Sbjct: 69 SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128
Query: 226 LENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKL 285
L + + + L + + LA+LH + VI+RD K+ +ILL D KL
Sbjct: 129 LTDIV---SQVRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKL 182
Query: 286 SDFG----LAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
SDFG ++KD P+ ++GT + APE + ++ D++S G++++EM+
Sbjct: 183 SDFGFCAQISKDVPK------RKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVD 236
Query: 342 G 342
G
Sbjct: 237 G 237
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 101/227 (44%), Gaps = 31/227 (13%)
Query: 127 DLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLT--VAVKTLNHDGLQGHK 184
DL++ ++ ++G G FG V V T V L+ +K + +
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEV--QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 185 EWLAEVNFLGNLLHPNLVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPW--- 240
+ +A N P +V+L Y +DD+ L +V E+MP G L N L +P W
Sbjct: 126 DIMAFAN------SPWVVQLF-YAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARF 177
Query: 241 -SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGK 299
+ + +AL A + F+H RD K N+LLD + KL+DFG ++G
Sbjct: 178 YTAEVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 228
Query: 300 THVSTRVMGTYGYAAPEYVMT----GHLTSKSDVYSFGVVLLEMLTG 342
T V GT Y +PE + + G+ + D +S GV L EML G
Sbjct: 229 VRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 101/227 (44%), Gaps = 31/227 (13%)
Query: 127 DLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLT--VAVKTLNHDGLQGHK 184
DL++ ++ ++G G FG V V T V L+ +K + +
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEV--QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 185 EWLAEVNFLGNLLHPNLVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPW--- 240
+ +A N P +V+L Y +DD+ L +V E+MP G L N L +P W
Sbjct: 126 DIMAFAN------SPWVVQLF-YAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARF 177
Query: 241 -SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGK 299
+ + +AL A + F+H RD K N+LLD + KL+DFG ++G
Sbjct: 178 YTAEVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 228
Query: 300 THVSTRVMGTYGYAAPEYVMT----GHLTSKSDVYSFGVVLLEMLTG 342
T V GT Y +PE + + G+ + D +S GV L EML G
Sbjct: 229 VRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 126/277 (45%), Gaps = 37/277 (13%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
LG+GGF F+ + + T V G + K+L Q K + E++ +L H
Sbjct: 46 FLGKGGFAKCFE--ISDADTKEVFAGK---IVPKSLLLKPHQREKMSM-EISIHRSLAHQ 99
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLP---WSIRMKIALGAAKGLAF 256
++V G+ ++D +V E R SL R+ +L P + +R +I LG +
Sbjct: 100 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----Y 154
Query: 257 LHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPE 316
LH VI+RD K N+ L+ D K+ DFGLA DG+ + GT Y APE
Sbjct: 155 LHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPE 209
Query: 317 YVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLD 376
+ + + DV+S G ++ +L G+ P E + ++ +L K+ Y +
Sbjct: 210 VLSKKGHSFEVDVWSIGCIMYTLLVGK-------PPFETSCLKET--YLRIKKNEYSI-- 258
Query: 377 PRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVV 413
P+ H + A L + L DP ARP ++E++
Sbjct: 259 PK---HIN----PVAASLIQKMLQTDPTARPTINELL 288
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 95/216 (43%), Gaps = 26/216 (12%)
Query: 134 NFRPESLLGEGGFGCVF--KGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE---WLA 188
+F ++G+G FG V + EE + AVK L + KE ++
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEE-----------VFYAVKVLQKKAILKKKEEKHIMS 87
Query: 189 EVN-FLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI- 246
E N L N+ HP LV L D+ V +++ G L HL R+ P R +
Sbjct: 88 ERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEP---RARFY 144
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
A A L +LH ++YRD K NILLD+ + L+DFGL K+ E T ++
Sbjct: 145 AAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST--TSTF 199
Query: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
GT Y APE + D + G VL EML G
Sbjct: 200 CGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 126/277 (45%), Gaps = 37/277 (13%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
LG+GGF F+ + + T V G + K+L Q K + E++ +L H
Sbjct: 48 FLGKGGFAKCFE--ISDADTKEVFAGK---IVPKSLLLKPHQREKMSM-EISIHRSLAHQ 101
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLP---WSIRMKIALGAAKGLAF 256
++V G+ ++D +V E R SL R+ +L P + +R +I LG +
Sbjct: 102 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----Y 156
Query: 257 LHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPE 316
LH VI+RD K N+ L+ D K+ DFGLA DG+ + GT Y APE
Sbjct: 157 LHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPE 211
Query: 317 YVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLD 376
+ + + DV+S G ++ +L G+ P E + ++ +L K+ Y +
Sbjct: 212 VLSKKGHSFEVDVWSIGCIMYTLLVGK-------PPFETSCLKET--YLRIKKNEYSI-- 260
Query: 377 PRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVV 413
P+ H + A L + L DP ARP ++E++
Sbjct: 261 PK---HIN----PVAASLIQKMLQTDPTARPTINELL 290
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 166 TGLTVAVKTLNHDGLQGHK---EWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMP 222
TG VAVK LN ++ + E+ L HP+++KL +V E++
Sbjct: 35 TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94
Query: 223 RGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYN 282
G L +++ + G + + R+ + +A H V++RD K N+LLDA N
Sbjct: 95 GGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM-----VVHRDLKPENVLLDAHMN 149
Query: 283 AKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTS--KSDVYSFGVVLLEML 340
AK++DFGL+ + DG+ + G+ YAAPE V++G L + + D++S GV+L +L
Sbjct: 150 AKIADFGLS-NMMSDGEFLRDS--CGSPNYAAPE-VISGRLYAGPEVDIWSCGVILYALL 205
Query: 341 TGRRSMD 347
G D
Sbjct: 206 CGTLPFD 212
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 23/209 (11%)
Query: 139 SLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLAEVNFLGNL 196
+LG+G FG V K T AVK +N + L EV L L
Sbjct: 28 CMLGKGSFGEVLKC---------KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 197 LHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAF 256
HPN++KL + +V E G L + + ++ + R I G+ +
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--IIKQVFSGITY 136
Query: 257 LHEEAEKPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYA 313
+H+ +++RD K NILL++ D + K+ DFGL+ ++ T + R+ GT Y
Sbjct: 137 MHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRI-GTAYYI 190
Query: 314 APEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
APE V+ G K DV+S GV+L +L+G
Sbjct: 191 APE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 158 GTAPVKPG----TGLTVAVKTLNHDGLQGHKEWL-AEVNFLGNLLHPNLVKLVGYCIEDD 212
G A VK TG VA+K ++ + L + E+ L NL H ++ +L +
Sbjct: 22 GFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETAN 81
Query: 213 QRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKT 272
+ +V E+ P G L +++ + L R+ + +A++H + +RD K
Sbjct: 82 KIFMVLEYCPGGELFDYIISQDRLS-EEETRV-VFRQIVSAVAYVHSQG---YAHRDLKP 136
Query: 273 SNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM-TGHLTSKSDVYS 331
N+L D + KL DFGL + H+ T G+ YAAPE + +L S++DV+S
Sbjct: 137 ENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT-CCGSLAYAAPELIQGKSYLGSEADVWS 195
Query: 332 FGVVLLEMLTGRRSMD--------KNRPNGEHNLVEWARP 363
G++L ++ G D K G++++ +W P
Sbjct: 196 MGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSP 235
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 23/209 (11%)
Query: 139 SLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLAEVNFLGNL 196
+LG+G FG V K T AVK +N + L EV L L
Sbjct: 28 CMLGKGSFGEVLKC---------KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 197 LHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAF 256
HPN++KL + +V E G L + + ++ + R I G+ +
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--IIKQVFSGITY 136
Query: 257 LHEEAEKPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYA 313
+H+ +++RD K NILL++ D + K+ DFGL+ ++ T + R+ GT Y
Sbjct: 137 MHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRI-GTAYYI 190
Query: 314 APEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
APE V+ G K DV+S GV+L +L+G
Sbjct: 191 APE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 28/221 (12%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPG----TGLTVAVKTLNHDGLQGH--KEWL 187
N+R +G+G F A VK TG VAVK ++ L ++
Sbjct: 8 NYRLLKTIGKGNF-------------AKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF 54
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
EV + L HPN+VKL + LV E+ G + ++L G W +
Sbjct: 55 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-----WMKEKEAR 109
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
+ ++ + +K +++RD K N+LLDAD N K++DFG + + K
Sbjct: 110 AKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FC 166
Query: 308 GTYGYAAPEYVMTGHLTS-KSDVYSFGVVLLEMLTGRRSMD 347
G+ YAAPE + DV+S GV+L +++G D
Sbjct: 167 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 95/220 (43%), Gaps = 27/220 (12%)
Query: 135 FRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLG 194
F L+G G +G V+KG VK TG A+K ++ G + +E E+N L
Sbjct: 26 FELVELVGNGTYGQVYKG-------RHVK--TGQLAAIKVMDVTGDE-EEEIKQEINMLK 75
Query: 195 NLLHP-NLVKLVGYCIE------DDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
H N+ G I+ DDQ LV EF GS+ + + L I
Sbjct: 76 KYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYIC 135
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
+GL+ LH+ VI+RD K N+LL + KL DFG++ A D +
Sbjct: 136 REILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVS--AQLDRTVGRRNTFI 190
Query: 308 GTYGYAAPEYVMTGH-----LTSKSDVYSFGVVLLEMLTG 342
GT + APE + KSD++S G+ +EM G
Sbjct: 191 GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 126/277 (45%), Gaps = 37/277 (13%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
LG+GGF F+ + + T V G + K+L Q K + E++ +L H
Sbjct: 22 FLGKGGFAKCFE--ISDADTKEVFAGK---IVPKSLLLKPHQREKMSM-EISIHRSLAHQ 75
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLP---WSIRMKIALGAAKGLAF 256
++V G+ ++D +V E R SL R+ +L P + +R +I LG +
Sbjct: 76 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----Y 130
Query: 257 LHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPE 316
LH VI+RD K N+ L+ D K+ DFGLA DG+ + GT Y APE
Sbjct: 131 LHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPE 185
Query: 317 YVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRLLD 376
+ + + DV+S G ++ +L G+ P E + ++ +L K+ Y +
Sbjct: 186 VLSKKGHSFEVDVWSIGCIMYTLLVGK-------PPFETSCLKET--YLRIKKNEYSI-- 234
Query: 377 PRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVV 413
P+ H + A L + L DP ARP ++E++
Sbjct: 235 PK---HIN----PVAASLIQKMLQTDPTARPTINELL 264
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWLAEVNFLGNLL 197
LGEG FG V T VA+K ++ L+ H E+++L L
Sbjct: 17 LGEGSFGKV---------KLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR 67
Query: 198 HPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFL 257
HP+++KL ++V E+ G L +++ K + R + A
Sbjct: 68 HPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHR 126
Query: 258 HEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEY 317
H+ +++RD K N+LLD + N K++DFGL+ + S G+ YAAPE
Sbjct: 127 HK-----IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE- 177
Query: 318 VMTGHLTS--KSDVYSFGVVLLEMLTGRRSMD 347
V+ G L + + DV+S G+VL ML GR D
Sbjct: 178 VINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 123 FMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQ- 181
F+ + + + ++ + +LG+G FG V TG AVK ++ ++
Sbjct: 22 FVQHSTAIFSDRYKGQRVLGKGSFGEVI---------LCKDKITGQECAVKVISKRQVKQ 72
Query: 182 --GHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLP 239
+ L EV L L HPN++KL + + LV E G L + + +
Sbjct: 73 KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV 132
Query: 240 WSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDAPE 296
+ R I G+ ++H+ +++RD K N+LL++ D N ++ DFGL+
Sbjct: 133 DAAR--IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 187
Query: 297 DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
K +GT Y APE V+ G K DV+S GV+L +L+G
Sbjct: 188 SKKMKDK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 29/224 (12%)
Query: 130 LATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA- 188
+AT + P + +G G +G V+K P +G VA+K++ G L
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKAR---------DPHSGHFVALKSVRVPNGGGGGGGLPI 56
Query: 189 ----EVNFLGNLL---HPNLVKLVGYCIED--DQRL---LVYEFMPRGSLENHLFRKGSL 236
EV L L HPN+V+L+ C D+ + LV+E + + L +L +
Sbjct: 57 STVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPP 115
Query: 237 PLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPE 296
LP + +GL FLH +++RD K NIL+ + KL+DFGLA+
Sbjct: 116 GLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY-- 170
Query: 297 DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEML 340
T V+ T Y APE ++ + D++S G + EM
Sbjct: 171 -SYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 104/222 (46%), Gaps = 32/222 (14%)
Query: 135 FRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLG 194
F+ E + G+G FG V G + TG++VA+K + D ++E L + L
Sbjct: 25 FQVERMAGQGTFGTVQLGK---------EKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLA 74
Query: 195 NLLHPNLVKLVGYCI---EDDQRLL----VYEFMP---RGSLENHLFRKGSLPLPWSIRM 244
L HPN+V+L Y E D+R + V E++P N+ +R+ P P I++
Sbjct: 75 VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNY-YRRQVAPPPILIKV 133
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILL-DADYNAKLSDFGLAK--DAPEDGKTH 301
+ + LH + V +RD K N+L+ +AD KL DFG AK E +
Sbjct: 134 -FLFQLIRSIGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAY 191
Query: 302 VSTRVMGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTG 342
+ +R Y APE + H T+ D++S G + EM+ G
Sbjct: 192 ICSRY-----YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 25/220 (11%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN-HDGLQGHK----E 185
A + + + +GEG +G VFK +NG G VA+K + G +G
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNG--------GRFVALKRVRVQTGEEGMPLSTIR 60
Query: 186 WLAEVNFLGNLLHPNLVKLVGYCI-----EDDQRLLVYEFMPRGSLENHLFRKGSLPLPW 240
+A + L HPN+V+L C + + LV+E + + L +L + +P
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPT 119
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT 300
+ +GL FLH V++RD K NIL+ + KL+DFGLA+
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQ 173
Query: 301 HVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEML 340
T V+ T Y APE ++ + D++S G + EM
Sbjct: 174 MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 123 FMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQ- 181
F+ + + + ++ + +LG+G FG V TG AVK ++ ++
Sbjct: 39 FVQHSTAIFSDRYKGQRVLGKGSFGEVI---------LCKDKITGQECAVKVISKRQVKQ 89
Query: 182 --GHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLP 239
+ L EV L L HPN++KL + + LV E G L + + +
Sbjct: 90 KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV 149
Query: 240 WSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDAPE 296
+ R I G+ ++H+ +++RD K N+LL++ D N ++ DFGL+
Sbjct: 150 DAAR--IIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 204
Query: 297 DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
K +GT Y APE V+ G K DV+S GV+L +L+G
Sbjct: 205 SKKMKDK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 123 FMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQ- 181
F+ + + + ++ + +LG+G FG V TG AVK ++ ++
Sbjct: 40 FVQHSTAIFSDRYKGQRVLGKGSFGEVI---------LCKDKITGQECAVKVISKRQVKQ 90
Query: 182 --GHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLP 239
+ L EV L L HPN++KL + + LV E G L + + +
Sbjct: 91 KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV 150
Query: 240 WSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDAPE 296
+ R I G+ ++H+ +++RD K N+LL++ D N ++ DFGL+
Sbjct: 151 DAAR--IIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 205
Query: 297 DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
K +GT Y APE V+ G K DV+S GV+L +L+G
Sbjct: 206 SKKMKDK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 75/154 (48%), Gaps = 23/154 (14%)
Query: 199 PNLVKLVGYC-IEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPW----SIRMKIALGAAK 252
P +V+L +C +DD+ L +V E+MP G L N L +P W + + +AL A
Sbjct: 135 PWVVQL--FCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIH 191
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
+ +H RD K N+LLD + KL+DFG E G H T V GT Y
Sbjct: 192 SMGLIH---------RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GTPDY 241
Query: 313 AAPEYVMT----GHLTSKSDVYSFGVVLLEMLTG 342
+PE + + G+ + D +S GV L EML G
Sbjct: 242 ISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 28/228 (12%)
Query: 123 FMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQ- 181
F+ + + + ++ + +LG+G FG V TG AVK ++ ++
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVI---------LCKDKITGQECAVKVISKRQVKQ 66
Query: 182 --GHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLP 239
+ L EV L L HPN++KL + + LV E G L + + +
Sbjct: 67 KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV 126
Query: 240 WSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDA---DYNAKLSDFGLAK--DA 294
+ R I G+ ++H+ +++RD K N+LL++ D N ++ DFGL+ +A
Sbjct: 127 DAAR--IIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181
Query: 295 PEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
+ K + GT Y APE V+ G K DV+S GV+L +L+G
Sbjct: 182 SKKMKDKI-----GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 21/208 (10%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGNLLH 198
LG+GGF ++ + + T V G + ++ H KE ++ E+ +L +
Sbjct: 49 FLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPH-----QKEKMSTEIAIHKSLDN 101
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLP---WSIRMKIALGAAKGLA 255
P++V G+ +DD +V E R SL R+ ++ P + +R I +G+
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQ 156
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAP 315
+LH VI+RD K N+ L+ D + K+ DFGLA DG+ + GT Y AP
Sbjct: 157 YLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKXLCGTPNYIAP 211
Query: 316 EYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
E + + + D++S G +L +L G+
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 10/160 (6%)
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIE--DDQRLLVYEFMPRGSLENHLFRKGS-----LPLP 239
++EVN L L HPN+V+ I+ + +V E+ G L + + KG+ L
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEE 111
Query: 240 WSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGK 299
+ +R+ L A + V++RD K +N+ LD N KL DFGLA+ D
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-- 169
Query: 300 THVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEM 339
T + +GT Y +PE + KSD++S G +L E+
Sbjct: 170 TSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 21/208 (10%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGNLLH 198
LG+GGF ++ + + T V G + ++ H KE ++ E+ +L +
Sbjct: 49 FLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPH-----QKEKMSTEIAIHKSLDN 101
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLP---WSIRMKIALGAAKGLA 255
P++V G+ +DD +V E R SL R+ ++ P + +R I +G+
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQ 156
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAP 315
+LH VI+RD K N+ L+ D + K+ DFGLA DG+ + + GT Y AP
Sbjct: 157 YLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT--LCGTPNYIAP 211
Query: 316 EYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
E + + + D++S G +L +L G+
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 26/221 (11%)
Query: 130 LATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN-HDGLQGHK-EWL 187
+AT + P + +G G +G V+K P +G VA+K++ +G +G +
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKAR---------DPHSGHFVALKSVRVPNGEEGLPISTV 51
Query: 188 AEVNFLGNLL---HPNLVKLVGYCIED--DQRL---LVYEFMPRGSLENHLFRKGSLPLP 239
EV L L HPN+V+L+ C D+ + LV+E + + L +L + LP
Sbjct: 52 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLP 110
Query: 240 WSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGK 299
+ +GL FLH +++RD K NIL+ + KL+DFGLA+
Sbjct: 111 AETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SY 164
Query: 300 THVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEML 340
V+ T Y APE ++ + D++S G + EM
Sbjct: 165 QMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 21/208 (10%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGNLLH 198
LG+GGF ++ + + T V G + ++ H KE ++ E+ +L +
Sbjct: 49 FLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPH-----QKEKMSTEIAIHKSLDN 101
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLP---WSIRMKIALGAAKGLA 255
P++V G+ +DD +V E R SL R+ ++ P + +R I +G+
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQ 156
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAP 315
+LH VI+RD K N+ L+ D + K+ DFGLA DG+ + GT Y AP
Sbjct: 157 YLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCGTPNYIAP 211
Query: 316 EYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
E + + + D++S G +L +L G+
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 10/160 (6%)
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIE--DDQRLLVYEFMPRGSLENHLFRKGS-----LPLP 239
++EVN L L HPN+V+ I+ + +V E+ G L + + KG+ L
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEE 111
Query: 240 WSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGK 299
+ +R+ L A + V++RD K +N+ LD N KL DFGLA+ D
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-- 169
Query: 300 THVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEM 339
T + +GT Y +PE + KSD++S G +L E+
Sbjct: 170 TSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 21/208 (10%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGNLLH 198
LG+GGF ++ + + T V G + ++ H KE ++ E+ +L +
Sbjct: 33 FLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPH-----QKEKMSTEIAIHKSLDN 85
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLP---WSIRMKIALGAAKGLA 255
P++V G+ +DD +V E R SL R+ ++ P + +R I +G+
Sbjct: 86 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQ 140
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAP 315
+LH VI+RD K N+ L+ D + K+ DFGLA DG+ + GT Y AP
Sbjct: 141 YLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKDLCGTPNYIAP 195
Query: 316 EYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
E + + + D++S G +L +L G+
Sbjct: 196 EVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 25/220 (11%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN-HDGLQGHK----E 185
A + + + +GEG +G VFK +NG G VA+K + G +G
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNG--------GRFVALKRVRVQTGEEGMPLSTIR 60
Query: 186 WLAEVNFLGNLLHPNLVKLVGYCI-----EDDQRLLVYEFMPRGSLENHLFRKGSLPLPW 240
+A + L HPN+V+L C + + LV+E + + L +L + +P
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPT 119
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT 300
+ +GL FLH V++RD K NIL+ + KL+DFGLA+
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQ 173
Query: 301 HVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEML 340
T V+ T Y APE ++ + D++S G + EM
Sbjct: 174 MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 26/221 (11%)
Query: 130 LATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN-HDGLQGHK-EWL 187
+AT + P + +G G +G V+K P +G VA+K++ +G +G +
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKAR---------DPHSGHFVALKSVRVPNGEEGLPISTV 51
Query: 188 AEVNFLGNLL---HPNLVKLVGYCIED--DQRL---LVYEFMPRGSLENHLFRKGSLPLP 239
EV L L HPN+V+L+ C D+ + LV+E + + L +L + LP
Sbjct: 52 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLP 110
Query: 240 WSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGK 299
+ +GL FLH +++RD K NIL+ + KL+DFGLA+
Sbjct: 111 AETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SY 164
Query: 300 THVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEML 340
V+ T Y APE ++ + D++S G + EM
Sbjct: 165 QMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 25/220 (11%)
Query: 131 ATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN-HDGLQGHK----E 185
A + + + +GEG +G VFK +NG G VA+K + G +G
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNG--------GRFVALKRVRVQTGEEGMPLSTIR 60
Query: 186 WLAEVNFLGNLLHPNLVKLVGYCI-----EDDQRLLVYEFMPRGSLENHLFRKGSLPLPW 240
+A + L HPN+V+L C + + LV+E + + L +L + +P
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPT 119
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT 300
+ +GL FLH V++RD K NIL+ + KL+DFGLA+
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQ 173
Query: 301 HVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEML 340
T V+ T Y APE ++ + D++S G + EM
Sbjct: 174 MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 190
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 10 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 60
Query: 191 NFLGNLLHPNLVKLVGYCIEDDQRLLV-YEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
+ + L HP VKL + +DD++L + G L ++ + GS + +
Sbjct: 61 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 119
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+A L +LH K +I+RD K NILL+ D + +++DFG AK + K + +GT
Sbjct: 120 SA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
Y +PE + SD+++ G ++ +++ G
Sbjct: 175 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 190
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 33 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 83
Query: 191 NFLGNLLHPNLVKLVGYCIEDDQRLLV-YEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
+ + L HP VKL + +DD++L + G L ++ + GS + +
Sbjct: 84 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIV 142
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+A L +LH K +I+RD K NILL+ D + +++DFG AK + K + +GT
Sbjct: 143 SA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
Y +PE + + SD+++ G ++ +++ G
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 190
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 9 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 59
Query: 191 NFLGNLLHPNLVKLVGYCIEDDQRLLV-YEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
+ + L HP VKL + +DD++L + G L ++ + GS + +
Sbjct: 60 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 118
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+A L +LH K +I+RD K NILL+ D + +++DFG AK + K + +GT
Sbjct: 119 SA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
Y +PE + SD+++ G ++ +++ G
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 26/221 (11%)
Query: 130 LATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN-HDGLQGHK-EWL 187
+AT + P + +G G +G V+K P +G VA+K++ +G +G +
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKAR---------DPHSGHFVALKSVRVPNGEEGLPISTV 51
Query: 188 AEVNFLGNLL---HPNLVKLVGYCIED--DQRL---LVYEFMPRGSLENHLFRKGSLPLP 239
EV L L HPN+V+L+ C D+ + LV+E + + L +L + LP
Sbjct: 52 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLP 110
Query: 240 WSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGK 299
+ +GL FLH +++RD K NIL+ + KL+DFGLA+
Sbjct: 111 AETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SY 164
Query: 300 THVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEML 340
V+ T Y APE ++ + D++S G + EM
Sbjct: 165 QMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 190
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 8 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 58
Query: 191 NFLGNLLHPNLVKLVGYCIEDDQRLLV-YEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
+ + L HP VKL + +DD++L + G L ++ + GS + +
Sbjct: 59 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 117
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+A L +LH K +I+RD K NILL+ D + +++DFG AK + K + +GT
Sbjct: 118 SA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
Y +PE + SD+++ G ++ +++ G
Sbjct: 173 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 84/191 (43%), Gaps = 23/191 (12%)
Query: 166 TGLTVAVKTLNHDGLQGH--KEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPR 223
TG VAVK ++ L ++ EV L HPN+VKL + LV E+
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASG 97
Query: 224 GSLENHLFRKGSLPLPWSIRMKIALGAAK------GLAFLHEEAEKPVIYRDFKTSNILL 277
G + ++L G R K AK + + H+ K +++RD K N+LL
Sbjct: 98 GEVFDYLVAHG--------RXKEKEARAKFRQIVSAVQYCHQ---KFIVHRDLKAENLLL 146
Query: 278 DADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTS-KSDVYSFGVVL 336
DAD N K++DFG + + K G YAAPE + DV+S GV+L
Sbjct: 147 DADXNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 337 LEMLTGRRSMD 347
+++G D
Sbjct: 204 YTLVSGSLPFD 214
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 190
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 11 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 61
Query: 191 NFLGNLLHPNLVKLVGYCIEDDQRLLV-YEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
+ + L HP VKL + +DD++L + G L ++ + GS + +
Sbjct: 62 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 120
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+A L +LH K +I+RD K NILL+ D + +++DFG AK + K + +GT
Sbjct: 121 SA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
Y +PE + SD+++ G ++ +++ G
Sbjct: 176 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 190
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 33 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 83
Query: 191 NFLGNLLHPNLVKLVGYCIEDDQRLLV-YEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
+ + L HP VKL + +DD++L + G L ++ + GS + +
Sbjct: 84 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 142
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+A L +LH K +I+RD K NILL+ D + +++DFG AK + K + +GT
Sbjct: 143 SA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
Y +PE + SD+++ G ++ +++ G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 190
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 31 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 81
Query: 191 NFLGNLLHPNLVKLVGYCIEDDQRLLV-YEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
+ + L HP VKL + +DD++L + G L ++ + GS + +
Sbjct: 82 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 140
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+A L +LH K +I+RD K NILL+ D + +++DFG AK + K + +GT
Sbjct: 141 SA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
Y +PE + SD+++ G ++ +++ G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 190
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 34 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 84
Query: 191 NFLGNLLHPNLVKLVGYCIEDDQRLLV-YEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
+ + L HP VKL + +DD++L + G L ++ + GS + +
Sbjct: 85 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 143
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+A L +LH K +I+RD K NILL+ D + +++DFG AK + K + +GT
Sbjct: 144 SA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
Y +PE + SD+++ G ++ +++ G
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 190
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 33 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 83
Query: 191 NFLGNLLHPNLVKLVGYCIEDDQRLLV-YEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
+ + L HP VKL + +DD++L + G L ++ + GS + +
Sbjct: 84 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 142
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+A L +LH K +I+RD K NILL+ D + +++DFG AK + K + +GT
Sbjct: 143 SA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
Y +PE + SD+++ G ++ +++ G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 190
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 34 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 84
Query: 191 NFLGNLLHPNLVKLVGYCIEDDQRLLV-YEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
+ + L HP VKL + +DD++L + G L ++ + GS + +
Sbjct: 85 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 143
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+A L +LH K +I+RD K NILL+ D + +++DFG AK + K + +GT
Sbjct: 144 SA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
Y +PE + SD+++ G ++ +++ G
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 190
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 31 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 81
Query: 191 NFLGNLLHPNLVKLVGYCIEDDQRLLV-YEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
+ + L HP VKL + +DD++L + G L ++ + GS + +
Sbjct: 82 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 140
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+A L +LH K +I+RD K NILL+ D + +++DFG AK + K + +GT
Sbjct: 141 SA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
Y +PE + SD+++ G ++ +++ G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 28/228 (12%)
Query: 123 FMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQ- 181
F+ + + + ++ + +LG+G FG V TG AVK ++ ++
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVI---------LCKDKITGQECAVKVISKRQVKQ 66
Query: 182 --GHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLP 239
+ L EV L L HPN+ KL + + LV E G L + + +
Sbjct: 67 KTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV 126
Query: 240 WSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDA---DYNAKLSDFGLAK--DA 294
+ R I G+ + H+ +++RD K N+LL++ D N ++ DFGL+ +A
Sbjct: 127 DAAR--IIRQVLSGITYXHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181
Query: 295 PEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
+ K + GT Y APE V+ G K DV+S GV+L +L+G
Sbjct: 182 SKKXKDKI-----GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 85/189 (44%), Gaps = 30/189 (15%)
Query: 237 PLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPE 296
P+ + + A+G+ FL + + I+RD NILL + K+ DFGLA+D +
Sbjct: 195 PITMEDLISYSFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYK 251
Query: 297 D------GKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNR 350
+ G T + + M APE + ++KSDV+S+GV+L E+ + S
Sbjct: 252 NPDYVRKGDTRLPLKWM------APESIFDKIYSTKSDVWSYGVLLWEIFSLGGS---PY 302
Query: 351 PNGEHNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMS 410
P + + +R G + R P + Q+ C RDPK RPR +
Sbjct: 303 PGVQMDEDFCSRLREGMRMRAPEYSTPEI------------YQIMLDCWHRDPKERPRFA 350
Query: 411 EVVETLKPL 419
E+VE L L
Sbjct: 351 ELVEKLGDL 359
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 190
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 33 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 83
Query: 191 NFLGNLLHPNLVKLVGYCIEDDQRLLV-YEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
+ + L HP VKL + +DD++L + G L ++ + GS + +
Sbjct: 84 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 142
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+A L +LH K +I+RD K NILL+ D + +++DFG AK + K + +GT
Sbjct: 143 SA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
Y +PE + SD+++ G ++ +++ G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 190
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 33 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 83
Query: 191 NFLGNLLHPNLVKLVGYCIEDDQRLLV-YEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
+ + L HP VKL + +DD++L + G L ++ + GS + +
Sbjct: 84 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 142
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+A L +LH K +I+RD K NILL+ D + +++DFG AK + K + +GT
Sbjct: 143 SA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
Y +PE + SD+++ G ++ +++ G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 190
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 31 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 81
Query: 191 NFLGNLLHPNLVKLVGYCIEDDQRLLV-YEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
+ + L HP VKL + +DD++L + G L ++ + GS + +
Sbjct: 82 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 140
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+A L +LH K +I+RD K NILL+ D + +++DFG AK + K + +GT
Sbjct: 141 SA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
Y +PE + SD+++ G ++ +++ G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 190
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 36 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 86
Query: 191 NFLGNLLHPNLVKLVGYCIEDDQRLLV-YEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
+ + L HP VKL + +DD++L + G L ++ + GS + +
Sbjct: 87 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 145
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+A L +LH K +I+RD K NILL+ D + +++DFG AK + K + +GT
Sbjct: 146 SA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
Y +PE + SD+++ G ++ +++ G
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 19/213 (8%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 190
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 30 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 80
Query: 191 NFLGNLLHPNLVKLVGYCIEDDQRLLV-YEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
+ + L HP VKL + +DD++L + G L ++ + GS + R A
Sbjct: 81 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-RFYTA-E 137
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
L +LH K +I+RD K NILL+ D + +++DFG AK + K + +GT
Sbjct: 138 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
Y +PE + SD+++ G ++ +++ G
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 190
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 33 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 83
Query: 191 NFLGNLLHPNLVKLVGYCIEDDQRLLV-YEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
+ + L HP VKL + +DD++L + G L ++ + GS + +
Sbjct: 84 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 142
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+A L +LH K +I+RD K NILL+ D + +++DFG AK + K + +GT
Sbjct: 143 SA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
Y +PE + SD+++ G ++ +++ G
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 19/213 (8%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 190
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 15 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 65
Query: 191 NFLGNLLHPNLVKLVGYCIEDDQRLLV-YEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
+ + L HP VKL + +DD++L + G L ++ + GS + R A
Sbjct: 66 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-RFYTA-E 122
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
L +LH K +I+RD K NILL+ D + +++DFG AK + K + +GT
Sbjct: 123 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
Y +PE + SD+++ G ++ +++ G
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 19/213 (8%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 190
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 30 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 80
Query: 191 NFLGNLLHPNLVKLVGYCIEDDQRLLV-YEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
+ + L HP VKL + +DD++L + G L ++ + GS + R A
Sbjct: 81 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT-RFYTA-E 137
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
L +LH K +I+RD K NILL+ D + +++DFG AK + K + +GT
Sbjct: 138 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
Y +PE + SD+++ G ++ +++ G
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 139 SLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLL 197
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 49 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 198 HPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMK------IALGAA 251
H N++ I D R E M L HL L + +
Sbjct: 100 HENIIG-----INDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQIL 154
Query: 252 KGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA-PEDGKTHVSTRVMGTY 310
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ A P+ T T + T
Sbjct: 155 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 311 GYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGR 343
Y APE ++ +KS D++S G +L EML+ R
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 10/160 (6%)
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIE--DDQRLLVYEFMPRGSLENHLFRKGS-----LPLP 239
++EVN L L HPN+V+ I+ + +V E+ G L + + KG+ L
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEE 111
Query: 240 WSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGK 299
+ +R+ L A + V++RD K +N+ LD N KL DFGLA+ D
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-- 169
Query: 300 THVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEM 339
+ +GT Y +PE + KSD++S G +L E+
Sbjct: 170 EDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 183 HKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSL-PLPWS 241
H+E E++ L +L HPN++KL + LV EF G L + + +
Sbjct: 90 HEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA 149
Query: 242 IRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDAD---YNAKLSDFGLAKDAPEDG 298
MK L G+ +LH+ +++RD K NILL+ N K+ DFGL+ +D
Sbjct: 150 NIMKQILS---GICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY 203
Query: 299 KTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
K +GT Y APE V+ K DV+S GV++ +L G
Sbjct: 204 KLRDR---LGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQRLLV-YEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
E + + L HP VKL + +DD++L + G L ++ + GS +
Sbjct: 80 ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 138
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
+ +A L +LH K +I+RD K NILL+ D + +++DFG AK + K + +
Sbjct: 139 IVSA--LEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 308 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
GT Y +PE + SD+++ G ++ +++ G
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 18/212 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E G VK + K L VNF P
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL Y +D+ L +V E++P G + +HL R G P + A +LH
Sbjct: 103 LVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP 351
+ D ++ GV++ EM G ++P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 18/212 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E G VK + K L VNF P
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL Y +D+ L +V E++P G + +HL R G P + A +LH
Sbjct: 103 LVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP 351
+ D ++ GV++ EM G ++P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
+G G FG V E G VK + K L VNF P
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E+MP G + +HL R G P + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D K++DFG AK G+T + GT Y APE ++
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTG 342
+ D ++ GV++ EM G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 18/212 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E G VK + K L VNF P
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL Y +D+ L +V E++P G + +HL R G P + A +LH
Sbjct: 103 LVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP 351
+ D ++ GV++ EM G ++P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 95/225 (42%), Gaps = 28/225 (12%)
Query: 121 RKFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGL 180
R F +D ++ RP LG+G FG V+ + + VA+K L +
Sbjct: 18 RHFTIDDFEIG----RP---LGKGKFGNVYLAR---------EKKSHFIVALKVLFKSQI 61
Query: 181 QGH---KEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLP 237
+ + E+ +L HPN+++L Y + + L+ E+ PRG L L + S
Sbjct: 62 EKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL--QKSCT 119
Query: 238 LPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPED 297
I A L + H K VI+RD K N+LL K++DFG + AP
Sbjct: 120 FDEQRTATIMEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSL 176
Query: 298 GKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
+ + GT Y PE + K D++ GV+ E+L G
Sbjct: 177 RR----KTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
+G G FG V E G VK + K L VNF P
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E+MP G + +HL R G P + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D K++DFG AK G+T + GT Y APE ++
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTG 342
+ D ++ GV++ EM G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 190
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 25 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 191 NFLGNLLHPNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
L ++ H N++ L+ E + LV M G+ N++ + L ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQF 129
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
I +GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+T
Sbjct: 130 LI-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 185
Query: 305 RVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
R Y APE ++ H D++S G ++ E+LTGR
Sbjct: 186 R-----WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 117/261 (44%), Gaps = 25/261 (9%)
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSL-PLPWSIRMK 245
L EV L L HPN++KL + + LV E G L + + + + ++ +K
Sbjct: 84 LEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIK 143
Query: 246 IALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDAPEDGKTHV 302
L G+ +LH+ +++RD K N+LL++ D K+ DFGL+ A + + +
Sbjct: 144 QVLS---GVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLS--AVFENQKKM 195
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG--------RRSMDKNRPNGE 354
R +GT Y APE V+ K DV+S GV+L +L G + + + G+
Sbjct: 196 KER-LGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGK 253
Query: 355 HNLV--EWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKAR-PRMSE 411
+ EW G K ++L + S + + + + C ++ P ++
Sbjct: 254 YTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLAN 313
Query: 412 VVETLKPLQNLKDMASSSYYF 432
+E ++ QN + +A ++ +
Sbjct: 314 AIENMRKFQNSQKLAQAALLY 334
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TGL VAVK L+ + K E+ L ++ H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDD-HVQFLI-YQILR 136
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+TR Y
Sbjct: 137 GLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 23/220 (10%)
Query: 134 NFRPESLLGEGGFG----CVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE 189
N+ P+ +LG G C+ K +E + G + + + + + + L E
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQ----ELREATLKE 73
Query: 190 VNFLGNLL-HPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL 248
V+ L + HPN+++L + LV++ M +G L ++L K +L + ++ AL
Sbjct: 74 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL 133
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
+ + LH+ +++RD K NILLD D N KL+DFG + K V G
Sbjct: 134 --LEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCG 185
Query: 309 TYGYAAPEYVMTGH------LTSKSDVYSFGVVLLEMLTG 342
T Y APE + + D++S GV++ +L G
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 190
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 32 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 191 NFLGNLLHPNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
L ++ H N++ L+ E + LV M G+ N++ + L ++
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQF 136
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
I +GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+T
Sbjct: 137 LI-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVAT 192
Query: 305 RVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
R Y APE ++ H D++S G ++ E+LTGR
Sbjct: 193 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 24/227 (10%)
Query: 122 KFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQ 181
+FM N + N+ + LG+G F V + V TGL A K +N L
Sbjct: 18 EFMMNASTKFSDNYDVKEELGKGAFSVVRRC---------VHKTTGLEFAAKIINTKKLS 68
Query: 182 GH--KEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSL-ENHLFRKGSLPL 238
++ E L HPN+V+L E+ LV++ + G L E+ + R+
Sbjct: 69 ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA 128
Query: 239 PWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYN---AKLSDFGLAKDAP 295
S ++ L + +A+ H +++R+ K N+LL + KL+DFGLA +
Sbjct: 129 DASHCIQQIL---ESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182
Query: 296 EDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
+ H GT GY +PE + + D+++ GV+L +L G
Sbjct: 183 DSEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TGL VAVK L+ + K E+ L ++ H
Sbjct: 35 IGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 85
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQFLI-YQILR 141
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+TR Y
Sbjct: 142 GLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WY 193
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TGL VAVK L+ + K E+ L ++ H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDD-HVQFLI-YQILR 136
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+TR Y
Sbjct: 137 GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 23/220 (10%)
Query: 134 NFRPESLLGEGGFG----CVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE 189
N+ P+ +LG G C+ K +E + G + + + + + + L E
Sbjct: 5 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQ----ELREATLKE 60
Query: 190 VNFLGNLL-HPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL 248
V+ L + HPN+++L + LV++ M +G L ++L K +L + KI
Sbjct: 61 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKET--RKIMR 118
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
+ + LH+ +++RD K NILLD D N KL+DFG + K V G
Sbjct: 119 ALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCG 172
Query: 309 TYGYAAPEYVMTGH------LTSKSDVYSFGVVLLEMLTG 342
T Y APE + + D++S GV++ +L G
Sbjct: 173 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 91/212 (42%), Gaps = 18/212 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E G VK + K L VNF P
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 95
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++P G + +HL R G P + A +LH
Sbjct: 96 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 152
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 153 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 204
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP 351
+ D ++ GV++ EM G ++P
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 23/220 (10%)
Query: 134 NFRPESLLGEGGFG----CVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE 189
N+ P+ +LG G C+ K +E + G + + + + + + L E
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQ----ELREATLKE 73
Query: 190 VNFLGNLL-HPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL 248
V+ L + HPN+++L + LV++ M +G L ++L K +L + ++ AL
Sbjct: 74 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL 133
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
+ + LH+ +++RD K NILLD D N KL+DFG + K V G
Sbjct: 134 --LEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---SVCG 185
Query: 309 TYGYAAPEYVMTGH------LTSKSDVYSFGVVLLEMLTG 342
T Y APE + + D++S GV++ +L G
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 139/322 (43%), Gaps = 76/322 (23%)
Query: 141 LGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLL-- 197
+G+G +G V++G W G +VAVK + + + W E +L
Sbjct: 16 VGKGRYGEVWRGLW------------HGESVAVKIFSS---RDEQSWFRETEIYNTVLLR 60
Query: 198 HPNLVKLVGYCI----EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKG 253
H N++ + + Q L+ + GSL + L R+ P + +++A+ AA G
Sbjct: 61 HDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEP---HLALRLAVSAACG 117
Query: 254 LAFLHEEA----EKPVI-YRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST---- 304
LA LH E KP I +RDFK+ N+L+ ++ ++D GLA G ++
Sbjct: 118 LAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAV-MHSQGSDYLDIGNNP 176
Query: 305 RVMGTYGYAAPEY----VMTGHLTSK--SDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLV 358
RV GT Y APE + T S +D+++FG+VL E+ RR++ NG +V
Sbjct: 177 RV-GTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTI----VNG---IV 226
Query: 359 EWARPHLGDKRRFYRLL--DPRLEGHFSIKGSQKAT-----------------QLAAQCL 399
E RP FY ++ DP E + + T Q+ +C
Sbjct: 227 EDYRP------PFYDVVPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECW 280
Query: 400 SRDPKARPRMSEVVETLKPLQN 421
+P AR + +TL+ + N
Sbjct: 281 YPNPSARLTALRIKKTLQKISN 302
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 122/299 (40%), Gaps = 46/299 (15%)
Query: 128 LKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVK----TLNHDGLQGH 183
+++ + P LG G +G V E+ P +G +AVK T+N Q
Sbjct: 2 MEVKADDLEPIMELGRGAYGVV-----EKMRHVP----SGQIMAVKRIRATVNS---QEQ 49
Query: 184 KEWLAEVNF-LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRG--SLENHLFRKGSLPLPW 240
K L +++ + + P V G + + E M + KG +P
Sbjct: 50 KRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQ-TIPE 108
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKT 300
I KIA+ K L LH + VI+RD K SN+L++A K+ DFG++ +D
Sbjct: 109 DILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAK 166
Query: 301 HVSTRVMGTYGYAAPEYV-----MTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
+ G Y APE + G+ + KSD++S G+ ++E+ R D
Sbjct: 167 DIDA---GCKPYMAPERINPELNQKGY-SVKSDIWSLGITMIELAILRFPYD-------- 214
Query: 356 NLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
W P ++ P+L K S + +QCL ++ K RP E+++
Sbjct: 215 ---SWGTP-FQQLKQVVEEPSPQLPAD---KFSAEFVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 190
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 32 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 191 NFLGNLLHPNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
L ++ H N++ L+ E + LV M G+ N++ + L ++
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQF 136
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
I +GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+T
Sbjct: 137 LI-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVAT 192
Query: 305 RVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
R Y APE ++ H D++S G ++ E+LTGR
Sbjct: 193 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 91/212 (42%), Gaps = 18/212 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E G VK + K L VNF P
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 123
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++P G + +HL R G P + A +LH
Sbjct: 124 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 180
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 181 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRT---WXLCGTPEYLAPEIIL 232
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP 351
+ D ++ GV++ EM G ++P
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 190
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 32 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 191 NFLGNLLHPNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
L ++ H N++ L+ E + LV M G+ N++ + L ++
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQF 136
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
I +GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+T
Sbjct: 137 LI-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVAT 192
Query: 305 RVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
R Y APE ++ H D++S G ++ E+LTGR
Sbjct: 193 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 42/222 (18%)
Query: 139 SLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLL 197
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 29 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 198 HPNLVKLVG-------------YCIEDDQRLLVYEFMPRGSLEN-HLFRKGSLPLPWSIR 243
H N++ + Y ++D +Y+ + L N H+
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------------- 126
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA-PEDGKTHV 302
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ A P+ T
Sbjct: 127 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 183
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGR 343
T + T Y APE ++ +KS D++S G +L EML+ R
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 190
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 37 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 84
Query: 191 NFLGNLLHPNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
L ++ H N++ L+ E + LV M G+ N++ + L ++
Sbjct: 85 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQF 141
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
I +GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+T
Sbjct: 142 LI-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 197
Query: 305 RVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
R Y APE ++ H D++S G ++ E+LTGR
Sbjct: 198 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 190
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 36 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 83
Query: 191 NFLGNLLHPNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
L ++ H N++ L+ E + LV M G+ N++ + L ++
Sbjct: 84 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQF 140
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
I +GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+T
Sbjct: 141 LI-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVAT 196
Query: 305 RVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
R Y APE ++ H D++S G ++ E+LTGR
Sbjct: 197 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 190
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 37 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 84
Query: 191 NFLGNLLHPNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
L ++ H N++ L+ E + LV M G+ N++ + L ++
Sbjct: 85 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQF 141
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
I +GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+T
Sbjct: 142 LI-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 197
Query: 305 RVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
R Y APE ++ H D++S G ++ E+LTGR
Sbjct: 198 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 190
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 27 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 191 NFLGNLLHPNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
L ++ H N++ L+ E + LV M G+ N++ + L ++
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQF 131
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
I +GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+T
Sbjct: 132 LI-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 187
Query: 305 RVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
R Y APE ++ H D++S G ++ E+LTGR
Sbjct: 188 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 91/212 (42%), Gaps = 18/212 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E G VK + K L VNF P
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 103
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++P G + +HL R G P + A +LH
Sbjct: 104 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 160
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 161 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 212
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP 351
+ D ++ GV++ EM G ++P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TGL VAVK L+ + K E+ L ++ H
Sbjct: 35 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 85
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQFLI-YQILR 141
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+TR Y
Sbjct: 142 GLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WY 193
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 91/212 (42%), Gaps = 18/212 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E G VK + K L VNF P
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 103
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++P G + +HL R G P + A +LH
Sbjct: 104 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 160
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 161 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 212
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP 351
+ D ++ GV++ EM G ++P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 77/181 (42%), Gaps = 21/181 (11%)
Query: 238 LPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPED 297
+P I KI L K L L E + +I+RD K SNILLD N KL DFG++ +
Sbjct: 122 IPEEILGKITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVD- 178
Query: 298 GKTHVSTRVMGTYGYAAPEYVMTGH----LTSKSDVYSFGVVLLEMLTGRRSMDKNRPNG 353
+ TR G Y APE + +SDV+S G+ L E+ TGR P
Sbjct: 179 --SIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPY----PKW 232
Query: 354 EHNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVV 413
+ + GD P+L + S CL++D RP+ E++
Sbjct: 233 NSVFDQLTQVVKGDP--------PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELL 284
Query: 414 E 414
+
Sbjct: 285 K 285
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 36/226 (15%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 192
R + +G+G FG V++G G VAVK + + + W E
Sbjct: 4 RTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEI 49
Query: 193 LGNLL--HPNLVKLVGYCIEDD----QRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
++ H N++ + +D+ Q LV ++ GSL ++L R + +K+
Sbjct: 50 YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKL 106
Query: 247 ALGAAKGLAFLHEEAE----KPVI-YRDFKTSNILLDADYNAKLSDFGLA--KDAPEDGK 299
AL A GLA LH E KP I +RD K+ NIL+ + ++D GLA D+ D
Sbjct: 107 ALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI 166
Query: 300 THVSTRVMGTYGYAAPEY----VMTGHLTS--KSDVYSFGVVLLEM 339
+GT Y APE + H S ++D+Y+ G+V E+
Sbjct: 167 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 91/212 (42%), Gaps = 18/212 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E G VK + K L VNF P
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 95
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++P G + +HL R G P + A +LH
Sbjct: 96 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHA--RFYAAQIVLTFEYLHS 152
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 153 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 204
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP 351
+ D ++ GV++ EM G ++P
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLAEV 190
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 37 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYREL 84
Query: 191 NFLGNLLHPNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
L ++ H N++ L+ E + LV M G+ N++ + L ++
Sbjct: 85 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQF 141
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
I +GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+T
Sbjct: 142 LI-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 197
Query: 305 RVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
R Y APE ++ H D++S G ++ E+LTGR
Sbjct: 198 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 100/227 (44%), Gaps = 36/227 (15%)
Query: 132 TRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVN 191
R + +G+G FG V++G G VAVK + + + W E
Sbjct: 5 ARTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAE 50
Query: 192 FLGNLL--HPNLVKLVGYCIEDD----QRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMK 245
++ H N++ + +D+ Q LV ++ GSL ++L R + +K
Sbjct: 51 IYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIK 107
Query: 246 IALGAAKGLAFLHEEAE----KPVI-YRDFKTSNILLDADYNAKLSDFGLA--KDAPEDG 298
+AL A GLA LH E KP I +RD K+ NIL+ + ++D GLA D+ D
Sbjct: 108 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT 167
Query: 299 KTHVSTRVMGTYGYAAPEY----VMTGHLTS--KSDVYSFGVVLLEM 339
+GT Y APE + H S ++D+Y+ G+V E+
Sbjct: 168 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 190
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 31 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 191 NFLGNLLHPNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
L ++ H N++ L+ E + LV M G+ N++ + L ++
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQF 135
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
I +GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+T
Sbjct: 136 LI-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 191
Query: 305 RVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
R Y APE ++ H D++S G ++ E+LTGR
Sbjct: 192 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 42/222 (18%)
Query: 139 SLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLL 197
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 29 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 198 HPNLVKLVG-------------YCIEDDQRLLVYEFMPRGSLEN-HLFRKGSLPLPWSIR 243
H N++ + Y ++D +Y+ + L N H+
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------------- 126
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA-PEDGKTHV 302
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ A P+ T
Sbjct: 127 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 183
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGR 343
T + T Y APE ++ +KS D++S G +L EML+ R
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 91/212 (42%), Gaps = 18/212 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E G VK + K L VNF P
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 103
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++P G + +HL R G P + A +LH
Sbjct: 104 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 160
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 161 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 212
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP 351
+ D ++ GV++ EM G ++P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TGL VAVK L+ + K E+ L ++ H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQFLI-YQILR 136
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+TR Y
Sbjct: 137 GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 190
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 25 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 191 NFLGNLLHPNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
L ++ H N++ L+ E + LV M G+ N++ + L ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQF 129
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
I +GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+T
Sbjct: 130 LI-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 185
Query: 305 RVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
R Y APE ++ H D++S G ++ E+LTGR
Sbjct: 186 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 190
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 25 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 191 NFLGNLLHPNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
L ++ H N++ L+ E + LV M G+ N++ + L ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQF 129
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
I +GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+T
Sbjct: 130 LI-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 185
Query: 305 RVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
R Y APE ++ H D++S G ++ E+LTGR
Sbjct: 186 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V E G VK + K L VNF P
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E+ P G + +HL R G P + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+++D K++DFGLAK G+T + GT Y APE ++
Sbjct: 160 ---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK--GRT---WXLCGTPEYLAPEIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTG 342
+ D ++ GV++ EM G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 190
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 31 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 191 NFLGNLLHPNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
L ++ H N++ L+ E + LV M G+ N++ + L ++
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQF 135
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
I +GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+T
Sbjct: 136 LI-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 191
Query: 305 RVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
R Y APE ++ H D++S G ++ E+LTGR
Sbjct: 192 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 190
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 36 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 83
Query: 191 NFLGNLLHPNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
L ++ H N++ L+ E + LV M G+ N++ + L ++
Sbjct: 84 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQF 140
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
I +GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+T
Sbjct: 141 LI-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 196
Query: 305 RVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
R Y APE ++ H D++S G ++ E+LTGR
Sbjct: 197 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 190
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 27 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 191 NFLGNLLHPNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
L ++ H N++ L+ E + LV M G+ N++ + L ++
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQF 131
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
I +GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+T
Sbjct: 132 LI-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVAT 187
Query: 305 RVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
R Y APE ++ H D++S G ++ E+LTGR
Sbjct: 188 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 42/222 (18%)
Query: 139 SLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLL 197
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 29 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 198 HPNLVKLVG-------------YCIEDDQRLLVYEFMPRGSLEN-HLFRKGSLPLPWSIR 243
H N++ + Y ++D +Y+ + L N H+
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------------- 126
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA-PEDGKTHV 302
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ A P+ T
Sbjct: 127 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 183
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGR 343
T + T Y APE ++ +KS D++S G +L EML+ R
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 42/222 (18%)
Query: 139 SLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLL 197
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 31 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 81
Query: 198 HPNLVKLVG-------------YCIEDDQRLLVYEFMPRGSLEN-HLFRKGSLPLPWSIR 243
H N++ + Y ++D +Y+ + L N H+
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------------- 128
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA-PEDGKTHV 302
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ A P+ T
Sbjct: 129 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 185
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGR 343
T + T Y APE ++ +KS D++S G +L EML+ R
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 100/227 (44%), Gaps = 36/227 (15%)
Query: 132 TRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVN 191
R + +G+G FG V++G G VAVK + + + W E
Sbjct: 2 ARTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAE 47
Query: 192 FLGNLL--HPNLVKLVGYCIEDD----QRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMK 245
++ H N++ + +D+ Q LV ++ GSL ++L R + +K
Sbjct: 48 IYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIK 104
Query: 246 IALGAAKGLAFLHEEAE----KPVI-YRDFKTSNILLDADYNAKLSDFGLA--KDAPEDG 298
+AL A GLA LH E KP I +RD K+ NIL+ + ++D GLA D+ D
Sbjct: 105 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT 164
Query: 299 KTHVSTRVMGTYGYAAPEY----VMTGHLTS--KSDVYSFGVVLLEM 339
+GT Y APE + H S ++D+Y+ G+V E+
Sbjct: 165 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 42/222 (18%)
Query: 139 SLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGNLL 197
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 33 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYXQRTLREIKILLRFR 83
Query: 198 HPNLVKLVG-------------YCIEDDQRLLVYEFMPRGSLEN-HLFRKGSLPLPWSIR 243
H N++ + Y ++D +Y+ + L N H+
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------------- 130
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA-PEDGKTHV 302
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ A P+ T
Sbjct: 131 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 187
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGR 343
T + T Y APE ++ +KS D++S G +L EML+ R
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 190
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 31 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 191 NFLGNLLHPNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
L ++ H N++ L+ E + LV M G+ N++ + L ++
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQF 135
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
I +GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+T
Sbjct: 136 LI-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVAT 191
Query: 305 RVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
R Y APE ++ H D++S G ++ E+LTGR
Sbjct: 192 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 18/205 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGNLLHP 199
LGEG + V+KG T VA+K + + +G + EV+ L +L H
Sbjct: 10 LGEGTYATVYKG---------KSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHA 60
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
N+V L + LV+E++ + L+ +L G++ ++++ +GLA+ H
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKL-FLFQLLRGLAYCHR 118
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+ V++RD K N+L++ KL+DFGLA+ KT+ + V T Y P+ ++
Sbjct: 119 QK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILL 173
Query: 320 -TGHLTSKSDVYSFGVVLLEMLTGR 343
+ +++ D++ G + EM TGR
Sbjct: 174 GSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 190
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 32 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 191 NFLGNLLHPNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
L ++ H N++ L+ E + LV M G+ N++ + L ++
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQF 136
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
I +GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+T
Sbjct: 137 LI-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 192
Query: 305 RVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
R Y APE ++ H D++S G ++ E+LTGR
Sbjct: 193 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 36/226 (15%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 192
R + +G+G FG V++G G VAVK + + + W E
Sbjct: 42 RTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEI 87
Query: 193 LGNLL--HPNLVKLVGYCIEDD----QRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
++ H N++ + +D+ Q LV ++ GSL ++L R + +K+
Sbjct: 88 YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKL 144
Query: 247 ALGAAKGLAFLHEEAE----KPVI-YRDFKTSNILLDADYNAKLSDFGLA--KDAPEDGK 299
AL A GLA LH E KP I +RD K+ NIL+ + ++D GLA D+ D
Sbjct: 145 ALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI 204
Query: 300 THVSTRVMGTYGYAAPEY----VMTGHLTS--KSDVYSFGVVLLEM 339
+GT Y APE + H S ++D+Y+ G+V E+
Sbjct: 205 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 190
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 27 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 191 NFLGNLLHPNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
L ++ H N++ L+ E + LV M G+ N++ + L ++
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQF 131
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
I +GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+T
Sbjct: 132 LI-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 187
Query: 305 RVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
R Y APE ++ H D++S G ++ E+LTGR
Sbjct: 188 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TGL VAVK L+ + K E+ L ++ H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQFLI-YQILR 136
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+TR Y
Sbjct: 137 GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TGL VAVK L+ + K E+ L ++ H
Sbjct: 35 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 85
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQFLI-YQILR 141
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+TR Y
Sbjct: 142 GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 193
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TGL VAVK L+ + K E+ L ++ H
Sbjct: 29 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 79
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 80 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQFLI-YQILR 135
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+TR Y
Sbjct: 136 GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 187
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 188 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 42/222 (18%)
Query: 139 SLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLL 197
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 29 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 198 HPNLVKLVG-------------YCIEDDQRLLVYEFMPRGSLEN-HLFRKGSLPLPWSIR 243
H N++ + Y ++D +Y+ + L N H+
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------------- 126
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA-PEDGKTHV 302
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ A P+ T
Sbjct: 127 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGF 183
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGR 343
T + T Y APE ++ +KS D++S G +L EML+ R
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 190
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 48 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 95
Query: 191 NFLGNLLHPNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
L ++ H N++ L+ E + LV M G+ N++ + L ++
Sbjct: 96 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQF 152
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
I +GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+T
Sbjct: 153 LI-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVAT 208
Query: 305 RVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
R Y APE ++ H D++S G ++ E+LTGR
Sbjct: 209 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 42/222 (18%)
Query: 139 SLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLL 197
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 33 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 198 HPNLVKLVG-------------YCIEDDQRLLVYEFMPRGSLEN-HLFRKGSLPLPWSIR 243
H N++ + Y ++D +Y+ + L N H+
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------------- 130
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA-PEDGKTHV 302
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ A P+ T
Sbjct: 131 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 187
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGR 343
T + T Y APE ++ +KS D++S G +L EML+ R
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TGL VAVK L+ + K E+ L ++ H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQFLI-YQILR 136
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+TR Y
Sbjct: 137 GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 42/222 (18%)
Query: 139 SLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLL 197
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 49 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 198 HPNLVKLVG-------------YCIEDDQRLLVYEFMPRGSLEN-HLFRKGSLPLPWSIR 243
H N++ + Y ++D +Y+ + L N H+
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------------- 146
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA-PEDGKTHV 302
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ A P+ T
Sbjct: 147 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 203
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGR 343
T + T Y APE ++ +KS D++S G +L EML+ R
Sbjct: 204 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E G VK + K L VNF P
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 103
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E+ P G + +HL R G P + A +LH
Sbjct: 104 LVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 160
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+++D K++DFG AK G+T + GT Y APE ++
Sbjct: 161 ---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 212
Query: 320 TGHLTSKSDVYSFGVVLLEMLTG 342
+ D ++ GV++ EM G
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 190
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 48 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 95
Query: 191 NFLGNLLHPNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
L ++ H N++ L+ E + LV M G+ N++ + L ++
Sbjct: 96 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQF 152
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
I +GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+T
Sbjct: 153 LI-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 208
Query: 305 RVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
R Y APE ++ H D++S G ++ E+LTGR
Sbjct: 209 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 36/226 (15%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 192
R + +G+G FG V++G G VAVK + + + W E
Sbjct: 29 RTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEI 74
Query: 193 LGNLL--HPNLVKLVGYCIEDD----QRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
++ H N++ + +D+ Q LV ++ GSL ++L R + +K+
Sbjct: 75 YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKL 131
Query: 247 ALGAAKGLAFLHEEAE----KPVI-YRDFKTSNILLDADYNAKLSDFGLA--KDAPEDGK 299
AL A GLA LH E KP I +RD K+ NIL+ + ++D GLA D+ D
Sbjct: 132 ALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI 191
Query: 300 THVSTRVMGTYGYAAPEY----VMTGHLTS--KSDVYSFGVVLLEM 339
+GT Y APE + H S ++D+Y+ G+V E+
Sbjct: 192 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 100/227 (44%), Gaps = 36/227 (15%)
Query: 132 TRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVN 191
R + +G+G FG V++G G VAVK + + + W E
Sbjct: 8 ARTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAE 53
Query: 192 FLGNLL--HPNLVKLVGYCIEDD----QRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMK 245
++ H N++ + +D+ Q LV ++ GSL ++L R + +K
Sbjct: 54 IYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIK 110
Query: 246 IALGAAKGLAFLHEEAE----KPVI-YRDFKTSNILLDADYNAKLSDFGLA--KDAPEDG 298
+AL A GLA LH E KP I +RD K+ NIL+ + ++D GLA D+ D
Sbjct: 111 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT 170
Query: 299 KTHVSTRVMGTYGYAAPEY----VMTGHLTS--KSDVYSFGVVLLEM 339
+GT Y APE + H S ++D+Y+ G+V E+
Sbjct: 171 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TGL VAVK L+ + K E+ L ++ H
Sbjct: 50 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 100
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQFLI-YQILR 156
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+TR Y
Sbjct: 157 GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 208
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 190
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 25 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 191 NFLGNLLHPNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
L ++ H N++ L+ E + LV M G+ N++ + L ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQF 129
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
I +GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+T
Sbjct: 130 LI-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 185
Query: 305 RVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
R Y APE ++ H D++S G ++ E+LTGR
Sbjct: 186 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TGL VAVK L+ + K E+ L ++ H
Sbjct: 49 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 99
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQFLI-YQILR 155
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+TR Y
Sbjct: 156 GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 207
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TGL VAVK L+ + K E+ L ++ H
Sbjct: 26 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQFLI-YQILR 132
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+TR Y
Sbjct: 133 GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 184
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TGL VAVK L+ + K E+ L ++ H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQFLI-YQILR 136
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+TR Y
Sbjct: 137 GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TGL VAVK L+ + K E+ L ++ H
Sbjct: 32 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 82
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQFLI-YQILR 138
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+TR Y
Sbjct: 139 GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 190
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TGL VAVK L+ + K E+ L ++ H
Sbjct: 28 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 78
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 79 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQFLI-YQILR 134
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+TR Y
Sbjct: 135 GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 186
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TGL VAVK L+ + K E+ L ++ H
Sbjct: 27 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 77
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQFLI-YQILR 133
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+TR Y
Sbjct: 134 GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 185
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TGL VAVK L+ + K E+ L ++ H
Sbjct: 35 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 85
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQFLI-YQILR 141
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+TR Y
Sbjct: 142 GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 193
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 42/222 (18%)
Query: 139 SLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLL 197
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 34 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 84
Query: 198 HPNLVKLVG-------------YCIEDDQRLLVYEFMPRGSLEN-HLFRKGSLPLPWSIR 243
H N++ + Y ++D +Y+ + L N H+
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------------- 131
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA-PEDGKTHV 302
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ A P+ T
Sbjct: 132 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 188
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGR 343
T + T Y APE ++ +KS D++S G +L EML+ R
Sbjct: 189 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 42/222 (18%)
Query: 139 SLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLL 197
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 35 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 85
Query: 198 HPNLVKLVG-------------YCIEDDQRLLVYEFMPRGSLEN-HLFRKGSLPLPWSIR 243
H N++ + Y ++D +Y+ + L N H+
Sbjct: 86 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------------- 132
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA-PEDGKTHV 302
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ A P+ T
Sbjct: 133 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 189
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGR 343
T + T Y APE ++ +KS D++S G +L EML+ R
Sbjct: 190 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 42/222 (18%)
Query: 139 SLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLL 197
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 26 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 76
Query: 198 HPNLVKLVG-------------YCIEDDQRLLVYEFMPRGSLEN-HLFRKGSLPLPWSIR 243
H N++ + Y ++D +Y+ + L N H+
Sbjct: 77 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------------- 123
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA-PEDGKTHV 302
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ A P+ T
Sbjct: 124 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 180
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGR 343
T + T Y APE ++ +KS D++S G +L EML+ R
Sbjct: 181 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 42/222 (18%)
Query: 139 SLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLL 197
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 33 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 198 HPNLVKLVG-------------YCIEDDQRLLVYEFMPRGSLEN-HLFRKGSLPLPWSIR 243
H N++ + Y ++D +Y+ + L N H+
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------------- 130
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA-PEDGKTHV 302
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ A P+ T
Sbjct: 131 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGR 343
T + T Y APE ++ +KS D++S G +L EML+ R
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 90/212 (42%), Gaps = 18/212 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
+G G FG V E G VK + K L VNF P
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++P G + +HL R G P + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D K++DFG AK G+T + GT Y APE ++
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP 351
+ D ++ GV++ EM G ++P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 102/223 (45%), Gaps = 23/223 (10%)
Query: 132 TRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEV 190
+ +F+ +SLLGEG +G V +A KP TG VA+K + D L E+
Sbjct: 10 SSDFQLKSLLGEGAYGVV--------CSATHKP-TGEIVAIKKIEPFDKPLFALRTLREI 60
Query: 191 NFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL-G 249
L + H N++ + D ++ + ++ L R S + ++ +
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQ 120
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPED--------GKTH 301
+ + LH VI+RD K SN+L++++ + K+ DFGLA+ E G+
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 302 VSTRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGR 343
T + T Y APE ++T S++ DV+S G +L E+ R
Sbjct: 178 GMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 42/222 (18%)
Query: 139 SLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLL 197
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 27 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 77
Query: 198 HPNLVKLVG-------------YCIEDDQRLLVYEFMPRGSLEN-HLFRKGSLPLPWSIR 243
H N++ + Y ++D +Y+ + L N H+
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------------- 124
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA-PEDGKTHV 302
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ A P+ T
Sbjct: 125 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 181
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGR 343
T + T Y APE ++ +KS D++S G +L EML+ R
Sbjct: 182 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 102/223 (45%), Gaps = 23/223 (10%)
Query: 132 TRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEV 190
+ +F+ +SLLGEG +G V +A KP TG VA+K + D L E+
Sbjct: 10 SSDFQLKSLLGEGAYGVV--------CSATHKP-TGEIVAIKKIEPFDKPLFALRTLREI 60
Query: 191 NFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL-G 249
L + H N++ + D ++ + ++ L R S + ++ +
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQ 120
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPED--------GKTH 301
+ + LH VI+RD K SN+L++++ + K+ DFGLA+ E G+
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 302 VSTRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGR 343
T + T Y APE ++T S++ DV+S G +L E+ R
Sbjct: 178 GMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 42/222 (18%)
Query: 139 SLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLL 197
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 37 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 87
Query: 198 HPNLVKLVG-------------YCIEDDQRLLVYEFMPRGSLEN-HLFRKGSLPLPWSIR 243
H N++ + Y ++D +Y+ + L N H+
Sbjct: 88 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------------- 134
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA-PEDGKTHV 302
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ A P+ T
Sbjct: 135 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 191
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGR 343
T + T Y APE ++ +KS D++S G +L EML+ R
Sbjct: 192 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 42/222 (18%)
Query: 139 SLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLL 197
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 29 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 198 HPNLVKLVG-------------YCIEDDQRLLVYEFMPRGSLEN-HLFRKGSLPLPWSIR 243
H N++ + Y ++D +Y+ + L N H+
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------------- 126
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA-PEDGKTHV 302
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ A P+ T
Sbjct: 127 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 183
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGR 343
T + T Y APE ++ +KS D++S G +L EML+ R
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 42/222 (18%)
Query: 139 SLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLL 197
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 27 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 77
Query: 198 HPNLVKLVG-------------YCIEDDQRLLVYEFMPRGSLEN-HLFRKGSLPLPWSIR 243
H N++ + Y ++D +Y+ + L N H+
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------------- 124
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA-PEDGKTHV 302
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ A P+ T
Sbjct: 125 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 181
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGR 343
T + T Y APE ++ +KS D++S G +L EML+ R
Sbjct: 182 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TGL VAVK L+ + K E+ L ++ H
Sbjct: 27 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 77
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQFLI-YQILR 133
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+TR Y
Sbjct: 134 GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 185
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 38/232 (16%)
Query: 134 NFRPESLLGEGGFGCVFKG---------WVEENGTAPVKPGTGLT--VAVKTLNHD-GLQ 181
+F ++LG+G FG V K +++ K T L+ + + +LNH ++
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 182 GHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWS 241
+ WL NF VK + + + E+ G+L + L +L
Sbjct: 67 YYAAWLERRNF---------VKPMTAVKKKSTLFIQMEYCENGTLYD-LIHSENLNQQRD 116
Query: 242 IRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPED---- 297
++ + L+++H + +I+RD K NI +D N K+ DFGLAK+
Sbjct: 117 EYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 298 --------GKTHVSTRVMGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEML 340
G + T +GT Y A E + TGH K D+YS G++ EM+
Sbjct: 174 KLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 90/212 (42%), Gaps = 18/212 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V E G VK + K L VNF P
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 103
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++P G + +HL R G P + A +LH
Sbjct: 104 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 160
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 161 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWT---LCGTPEYLAPEIIL 212
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP 351
+ D ++ GV++ EM G ++P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 42/222 (18%)
Query: 139 SLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLL 197
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 31 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLAFR 81
Query: 198 HPNLVKLVG-------------YCIEDDQRLLVYEFMPRGSLEN-HLFRKGSLPLPWSIR 243
H N++ + Y ++D +Y+ + L N H+
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------------- 128
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA-PEDGKTHV 302
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ A P+ T
Sbjct: 129 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 185
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGR 343
T + T Y APE ++ +KS D++S G +L EML+ R
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNF 192
+FR +LG G F V E+ T + VA+K + + L+G + + E+
Sbjct: 21 DFR--DVLGTGAFSEVILA--EDKRTQKL-------VAIKCIAKEALEGKEGSMENEIAV 69
Query: 193 LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
L + HPN+V L L+ + + G L + + KG + R+
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL--IFQVLD 127
Query: 253 GLAFLHEEAEKPVIYRDFKTSNIL---LDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+ +LH+ +++RD K N+L LD D +SDFGL+K ED + +ST GT
Sbjct: 128 AVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSK--MEDPGSVLST-ACGT 181
Query: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
GY APE + + D +S GV+ +L G
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 69/154 (44%), Gaps = 6/154 (3%)
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL 248
E G L P++V + + D Q + + L L R+G L P ++ + +
Sbjct: 84 EARTAGRLQEPHVVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQI 143
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMG 308
G+A +RD K NIL+ AD A L DFG+A ++ T + V G
Sbjct: 144 GSAL-----DAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-G 197
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
T Y APE H T ++D+Y+ VL E LTG
Sbjct: 198 TLYYXAPERFSESHATYRADIYALTCVLYECLTG 231
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 252 KGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA-PEDGKTHVSTRVMGTY 310
+GL ++H V++RD K SN+L++ + K+ DFGLA+ A PE T T + T
Sbjct: 155 RGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATR 211
Query: 311 GYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGR 343
Y APE ++ +KS D++S G +L EML+ R
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 90/212 (42%), Gaps = 18/212 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V E G VK + K L VNF P
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 88
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++P G + +HL R G P + A +LH
Sbjct: 89 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 145
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 146 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWT---LCGTPEYLAPEIIL 197
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP 351
+ D ++ GV++ EM G ++P
Sbjct: 198 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 229
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 42/222 (18%)
Query: 139 SLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLL 197
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 33 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 198 HPNLVKLVG-------------YCIEDDQRLLVYEFMPRGSLEN-HLFRKGSLPLPWSIR 243
H N++ + Y ++D +Y+ + L N H+
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHI------------- 130
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA-PEDGKTHV 302
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ A P+ T
Sbjct: 131 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGR 343
T + T Y APE ++ +KS D++S G +L EML+ R
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 42/222 (18%)
Query: 139 SLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLL 197
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 31 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLAFR 81
Query: 198 HPNLVKLVG-------------YCIEDDQRLLVYEFMPRGSLEN-HLFRKGSLPLPWSIR 243
H N++ + Y ++D +Y+ + L N H+
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------------- 128
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA-PEDGKTHV 302
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ A P+ T
Sbjct: 129 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGF 185
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGR 343
T + T Y APE ++ +KS D++S G +L EML+ R
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 39/267 (14%)
Query: 165 GTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDD--QRLLVYEFMP 222
G + V V + + +++ E L HPN++ ++G C L+ +MP
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92
Query: 223 RGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRD-FKTSNILLDADY 281
GSL N L + + S +K AL A+G+AFLH +P+I R + ++++D D
Sbjct: 93 YGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH--TLEPLIPRHALNSRSVMIDEDM 150
Query: 282 NAKLS--DFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSK---SDVYSFGVVL 336
A++S D + +P G+ M + APE + + +D++SF V+L
Sbjct: 151 TARISMADVKFSFQSP--GR-------MYAPAWVAPEALQKKPEDTNRRSADMWSFAVLL 201
Query: 337 LEMLTGRRSMD--KNRPNGEHNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQL 394
E++T N G +E RP + P + H S +L
Sbjct: 202 WELVTREVPFADLSNMEIGMKVALEGLRP----------TIPPGISPHVS--------KL 243
Query: 395 AAQCLSRDPKARPRMSEVVETLKPLQN 421
C++ DP RP+ +V L+ +Q+
Sbjct: 244 MKICMNEDPAKRPKFDMIVPILEKMQD 270
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 90/212 (42%), Gaps = 18/212 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V E G VK + K L VNF P
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++P G + +HL R G P + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP 351
+ D ++ GV++ EM G ++P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 33/220 (15%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 190
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 25 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 191 NFLGNLLHPNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
L ++ H N++ L+ E + LV M G+ N++ + L ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKSQKLTDD-HVQF 129
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
I +GL ++H +I+RD K SN+ ++ D K+ DFGL + ++ +V+T
Sbjct: 130 LI-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVAT 185
Query: 305 RVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
R Y APE ++ H D++S G ++ E+LTGR
Sbjct: 186 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 90/212 (42%), Gaps = 18/212 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V E G VK + K L VNF P
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++P G + +HL R G P + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP 351
+ D ++ GV++ EM G ++P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 90/212 (42%), Gaps = 18/212 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V E G VK + K L VNF P
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 103
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++P G + +HL R G P + A +LH
Sbjct: 104 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 160
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 161 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 212
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP 351
+ D ++ GV++ EM G ++P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 90/212 (42%), Gaps = 18/212 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V E G VK + K L VNF P
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++P G + +HL R G P + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP 351
+ D ++ GV++ EM G ++P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNF 192
+FR +LG G F V E+ T + VA+K + + L+G + + E+
Sbjct: 21 DFR--DVLGTGAFSEVILA--EDKRTQKL-------VAIKCIAKEALEGKEGSMENEIAV 69
Query: 193 LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
L + HPN+V L L+ + + G L + + KG + R+
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL--IFQVLD 127
Query: 253 GLAFLHEEAEKPVIYRDFKTSNIL---LDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+ +LH+ +++RD K N+L LD D +SDFGL+K ED + +ST GT
Sbjct: 128 AVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSK--MEDPGSVLST-ACGT 181
Query: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
GY APE + + D +S GV+ +L G
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 90/212 (42%), Gaps = 18/212 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V E G VK + K L VNF P
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++P G + +HL R G P + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHA--RFYAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP 351
+ D ++ GV++ EM G ++P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 90/212 (42%), Gaps = 18/212 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V E G VK + K L VNF P
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++P G + +HL R G P + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHA--RFYAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP 351
+ D ++ GV++ EM G ++P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 23/213 (10%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNF 192
+FR +LG G F V E+ T + VA+K + L+G + + E+
Sbjct: 21 DFR--DVLGTGAFSEVI--LAEDKRTQKL-------VAIKCIAKKALEGKEGSMENEIAV 69
Query: 193 LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
L + HPN+V L L+ + + G L + + KG + R+ + A
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA- 128
Query: 253 GLAFLHEEAEKPVIYRDFKTSNIL---LDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+ +LH+ +++RD K N+L LD D +SDFGL+K ED + +ST GT
Sbjct: 129 -VKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSK--MEDPGSVLST-ACGT 181
Query: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
GY APE + + D +S GV+ +L G
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 90/212 (42%), Gaps = 18/212 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V E G VK + K L VNF P
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 103
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++P G + +HL R G P + A +LH
Sbjct: 104 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHA--RFYAAQIVLTFEYLHS 160
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 161 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 212
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP 351
+ D ++ GV++ EM G ++P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 121/301 (40%), Gaps = 46/301 (15%)
Query: 126 NDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVK----TLNHDGLQ 181
+ ++ + P LG G +G V E+ P +G +AVK T+N Q
Sbjct: 44 QNFEVKADDLEPIMELGRGAYGVV-----EKMRHVP----SGQIMAVKRIRATVNS---Q 91
Query: 182 GHKEWLAEVNF-LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRG--SLENHLFRKGSLPL 238
K L +++ + + P V G + + E M + KG +
Sbjct: 92 EQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQT-I 150
Query: 239 PWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDG 298
P I KIA+ K L LH + VI+RD K SN+L++A K+ DFG++ +
Sbjct: 151 PEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSV 208
Query: 299 KTHVSTRVMGTYGYAAPEYV-----MTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNG 353
+ G Y APE + G+ + KSD++S G+ ++E+ R D
Sbjct: 209 AKTIDA---GCKPYMAPERINPELNQKGY-SVKSDIWSLGITMIELAILRFPYD------ 258
Query: 354 EHNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVV 413
W P ++ P+L K S + +QCL ++ K RP E++
Sbjct: 259 -----SWGTP-FQQLKQVVEEPSPQLPAD---KFSAEFVDFTSQCLKKNSKERPTYPELM 309
Query: 414 E 414
+
Sbjct: 310 Q 310
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V E G VK + K L VNF P
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E+ P G + +HL R G P + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+++D +++DFGLAK G+T + GT Y APE ++
Sbjct: 160 ---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK--GRT---WXLCGTPEYLAPEIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTG 342
+ D ++ GV++ EM G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 104/236 (44%), Gaps = 49/236 (20%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 193
N + L+G G +G V+KG ++E +P VAVK + Q ++ E N
Sbjct: 14 NLKLLELIGRGRYGAVYKGSLDE------RP-----VAVKVFSFANRQN---FINEKNIY 59
Query: 194 GNLL--HPNLVKLV--GYCIEDDQR---LLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
L H N+ + + + D R LLV E+ P GSL +L S W ++
Sbjct: 60 RVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS---DWVSSCRL 116
Query: 247 ALGAAKGLAFLHEEA-----EKPVI-YRDFKTSNILLDADYNAKLSDFGLAKDAP----- 295
A +GLA+LH E KP I +RD + N+L+ D +SDFGL+
Sbjct: 117 AHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLV 176
Query: 296 ---EDGKTHVSTRVMGTYGYAAPEYVMTGHLT--------SKSDVYSFGVVLLEML 340
E+ +S +GT Y APE V+ G + + D+Y+ G++ E+
Sbjct: 177 RPGEEDNAAISE--VGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNF 192
+FR +LG G F V E+ T + VA+K + + L+G + + E+
Sbjct: 21 DFR--DVLGTGAFSEVILA--EDKRTQKL-------VAIKCIAKEALEGKEGSMENEIAV 69
Query: 193 LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
L + HPN+V L L+ + + G L + + KG + R+
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL--IFQVLD 127
Query: 253 GLAFLHEEAEKPVIYRDFKTSNIL---LDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+ +LH+ +++RD K N+L LD D +SDFGL+K ED + +ST GT
Sbjct: 128 AVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSK--MEDPGSVLST-ACGT 181
Query: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
GY APE + + D +S GV+ +L G
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 42/222 (18%)
Query: 139 SLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLL 197
S +GEG +G V + N + VA++ ++ Q + + L E+ L
Sbjct: 33 SYIGEGAYGMVCSAYDNLNK---------VRVAIRKISPFEHQTYCQRTLREIKILLRFR 83
Query: 198 HPNLVKLVG-------------YCIEDDQRLLVYEFMPRGSLEN-HLFRKGSLPLPWSIR 243
H N++ + Y ++D +Y+ + L N H+
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------------- 130
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA-PEDGKTHV 302
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ A P+ T
Sbjct: 131 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGR 343
T + T Y APE ++ +KS D++S G +L EML+ R
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V E G VK + K L VNF P
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E+ P G + +HL R G P + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+++D K++DFG AK G+T + GT Y APE ++
Sbjct: 160 ---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTG 342
+ D ++ GV++ EM G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 95/222 (42%), Gaps = 29/222 (13%)
Query: 126 NDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE 185
++ AT R LG G FG V + +E+ T G AVK + + +
Sbjct: 90 EEVHWATHQLR----LGRGSFGEVHR--MEDKQT-------GFQCAVKKVRLEVFRAE-- 134
Query: 186 WLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMK 245
E+ L P +V L G E + E + GSL + +G LP R
Sbjct: 135 ---ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLP---EDRAL 188
Query: 246 IALGAA-KGLAFLHEEAEKPVIYRDFKTSNILLDAD-YNAKLSDFGLAKDAPEDG---KT 300
LG A +GL +LH + +++ D K N+LL +D +A L DFG A DG
Sbjct: 189 YYLGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSL 245
Query: 301 HVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
+ GT + APE V+ +K DV+S ++L ML G
Sbjct: 246 LTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSL-ENHLFRKGSLPLPWSIRMK 245
L EV L L HPN++KL + + LV E G L + + R+ + ++ MK
Sbjct: 52 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK 111
Query: 246 IALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDAPEDGKTHV 302
L G +LH+ +++RD K N+LL++ D K+ DFGL+ GK
Sbjct: 112 QVLS---GTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM-- 163
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
+GT Y APE V+ K DV+S GV+L +L G
Sbjct: 164 -KERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 190
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 25 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 191 NFLGNLLHPNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
L ++ H N++ L+ E + LV M G+ N++ + L ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQF 129
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
I +GL ++H +I+RD K SN+ ++ D K+ D+GLA+ ++ +V+T
Sbjct: 130 LI-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVAT 185
Query: 305 RVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
R Y APE ++ H D++S G ++ E+LTGR
Sbjct: 186 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V E G VK + K L VNF P
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E+ P G + +HL R G P + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHA--RFYAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+++D K++DFG AK G+T + GT Y APE ++
Sbjct: 160 ---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTG 342
+ D ++ GV++ EM G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 95/222 (42%), Gaps = 29/222 (13%)
Query: 126 NDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE 185
++ AT R LG G FG V + +E+ T G AVK + + +
Sbjct: 71 EEVHWATHQLR----LGRGSFGEVHR--MEDKQT-------GFQCAVKKVRLEVFRAE-- 115
Query: 186 WLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMK 245
E+ L P +V L G E + E + GSL + +G LP R
Sbjct: 116 ---ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLP---EDRAL 169
Query: 246 IALGAA-KGLAFLHEEAEKPVIYRDFKTSNILLDAD-YNAKLSDFGLAKDAPEDG---KT 300
LG A +GL +LH + +++ D K N+LL +D +A L DFG A DG
Sbjct: 170 YYLGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDL 226
Query: 301 HVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
+ GT + APE V+ +K DV+S ++L ML G
Sbjct: 227 LTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 19/209 (9%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKT--LNHDGLQGHKEWLAEVNFLGNLLH 198
+GEG +G VFK E T VA+K L+ D L E+ L L H
Sbjct: 10 IGEGTYGTVFKAKNRE---------THEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLH 258
N+V+L D + LV+EF + L+ + F + L I KGL F H
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKY-FDSCNGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 259 EEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYV 318
+ V++RD K N+L++ + KL+DFGLA+ + + + V T Y P+ +
Sbjct: 119 S---RNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV--TLWYRPPDVL 173
Query: 319 MTGHLTSKS-DVYSFGVVLLEMLTGRRSM 346
L S S D++S G + E+ R +
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 187 LAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSL-ENHLFRKGSLPLPWSIRMK 245
L EV L L HPN++KL + + LV E G L + + R+ + ++ MK
Sbjct: 69 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK 128
Query: 246 IALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDAPEDGKTHV 302
L G +LH+ +++RD K N+LL++ D K+ DFGL+ GK
Sbjct: 129 QVLS---GTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM-- 180
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
+GT Y APE V+ K DV+S GV+L +L G
Sbjct: 181 -KERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TGL VAVK L+ + K E+ L ++ H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQFLI-YQILR 136
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ V+TR Y
Sbjct: 137 GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATR-----WY 188
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 101/242 (41%), Gaps = 58/242 (23%)
Query: 134 NFRPESLLGEGGFGCVFKG---------WVEENGTAPVKPGTGLT--VAVKTLNHD-GLQ 181
+F ++LG+G FG V K +++ K T L+ + + +LNH ++
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 182 GHKEWLAEVNFLGNLL----HPNLVKLVGYCIEDDQRLLVYEFMPRGSLENH------LF 231
+ WL NF+ + L + YC + R L Y+ + +L LF
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYC---ENRTL-YDLIHSENLNQQRDEYWRLF 122
Query: 232 RKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLA 291
R+ + L+++H + +I+RD K NI +D N K+ DFGLA
Sbjct: 123 RQ----------------ILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLA 163
Query: 292 KDAPED------------GKTHVSTRVMGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLE 338
K+ G + T +GT Y A E + TGH K D+YS G++ E
Sbjct: 164 KNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE 223
Query: 339 ML 340
M+
Sbjct: 224 MI 225
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 23/223 (10%)
Query: 129 KLATRNFRPESLLGEGGFGCVF---KGWVEENGTA-PVKPGTGLTVAVKTLNHDGLQGHK 184
K+ NF +LG G +G VF K + G +K T+ K + + +
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 109
Query: 185 EWLAEVNFLGNLLHPNLVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIR 243
+ L + P LV L Y + + +L L+ +++ G L HL ++
Sbjct: 110 QVLEHIR-----QSPFLVTL-HYAFQTETKLHLILDYINGGELFTHLSQRERFT---EHE 160
Query: 244 MKIALG-AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
++I +G L LH+ +IYRD K NILLD++ + L+DFGL+K+ D +T
Sbjct: 161 VQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVAD-ETER 216
Query: 303 STRVMGTYGYAAPEYVM---TGHLTSKSDVYSFGVVLLEMLTG 342
+ GT Y AP+ V +GH D +S GV++ E+LTG
Sbjct: 217 AYDFCGTIEYMAPDIVRGGDSGH-DKAVDWWSLGVLMYELLTG 258
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 117/283 (41%), Gaps = 51/283 (18%)
Query: 135 FRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLG 194
F ES LG G V++ ++ GT KP L V KT++ ++ E+ L
Sbjct: 55 FEVESELGRGATSIVYR--CKQKGTQ--KP-YALKVLKKTVDKKIVR------TEIGVLL 103
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK-- 252
L HPN++KL + LV E + G L + + KG + A A K
Sbjct: 104 RLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYY------SERDAADAVKQI 157
Query: 253 --GLAFLHEEAEKPVIYRDFKTSNILLDA---DYNAKLSDFGLAKDAPEDGKTHVSTRVM 307
+A+LHE +++RD K N+L D K++DFGL+K + V
Sbjct: 158 LEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ---VLMKTVC 211
Query: 308 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
GT GY APE + + D++S G++ +L G R GD
Sbjct: 212 GTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER---------------GD 256
Query: 368 KRRFYRLLDPRLEGHFSI----KGSQKATQLAAQCLSRDPKAR 406
+ F R+L+ E +F + S A L + + DPK R
Sbjct: 257 QFMFRRILN--CEYYFISPWWDEVSLNAKDLVRKLIVLDPKKR 297
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 131/295 (44%), Gaps = 55/295 (18%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
++G G FG V++ + ++G VA+K + LQG E+ + L H
Sbjct: 27 VIGNGSFGVVYQAKLCDSGE---------LVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 200 NLVKLVGYCI-----EDDQRL-LVYEFMPRGS--LENHLFR-KGSLPLPWSIRMKIALGA 250
N+V+L + +D+ L LV +++P + H R K +LP+ I +K+ +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV---IYVKLYMYQ 130
Query: 251 A-KGLAFLHEEAEKPVIYRDFKTSNILLDADYNA-KLSDFGLAKDAP--EDGKTHVSTRV 306
+ LA++H + +RD K N+LLD D KL DFG AK E +++ +R
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 307 MGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHL 365
Y APE + TS DV+S G VL E+L G+ + +G LVE + L
Sbjct: 188 -----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK-VL 239
Query: 366 GDKRR---------FYRLLDPRLEGH-----FSIKGSQKATQLAAQCLSRDPKAR 406
G R + P+++ H F + +A L ++ L P AR
Sbjct: 240 GTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 294
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E G VK + K VNF P
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF------PF 103
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E+ P G + +HL R G P + A +LH
Sbjct: 104 LVKL-EFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 160
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D K++DFG AK G+T + GT Y APE ++
Sbjct: 161 ---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 212
Query: 320 TGHLTSKSDVYSFGVVLLEMLTG 342
+ D ++ GV++ EM G
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 86/205 (41%), Gaps = 19/205 (9%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTL--NHDGLQGHKEWLAEVNFLGNLLH 198
+GEG +G VFK + TG VA+K + D K L E+ L L H
Sbjct: 11 IGEGSYGVVFKCRNRD---------TGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLH 258
PNLV L+ + LV+E+ L H + +P + I + + F H
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVL--HELDRYQRGVPEHLVKSITWQTLQAVNFCH 119
Query: 259 EEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYV 318
+ I+RD K NIL+ KL DFG A+ G + + T Y +PE +
Sbjct: 120 KHN---CIHRDVKPENILITKHSVIKLCDFGFARLL--TGPSDYYDDEVATRWYRSPELL 174
Query: 319 M-TGHLTSKSDVYSFGVVLLEMLTG 342
+ DV++ G V E+L+G
Sbjct: 175 VGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 23/223 (10%)
Query: 132 TRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEV 190
+ +F+ +SLLGEG +G V +A KP TG VA+K + D L E+
Sbjct: 10 SSDFQLKSLLGEGAYGVV--------CSATHKP-TGEIVAIKKIEPFDKPLFALRTLREI 60
Query: 191 NFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL-G 249
L + H N++ + D ++ + ++ L R S + ++ +
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQ 120
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPED--------GKTH 301
+ + LH VI+RD K SN+L++++ + K+ DFGLA+ E G+
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 302 VSTRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGR 343
+ T Y APE ++T S++ DV+S G +L E+ R
Sbjct: 178 GMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 131/294 (44%), Gaps = 53/294 (18%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
++G G FG V++ + ++G VA+K + LQG E+ + L H
Sbjct: 27 VIGNGSFGVVYQAKLCDSGE---------LVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 200 NLVKLVGYCI-----EDDQRL-LVYEFMPRGS--LENHLFR-KGSLPLPWSIRMKIALGA 250
N+V+L + +D+ L LV +++P + H R K +LP+ I +K+ +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV---IYVKLYMYQ 130
Query: 251 A-KGLAFLHEEAEKPVIYRDFKTSNILLDADYNA-KLSDFGLAKDAP--EDGKTHVSTRV 306
+ LA++H + +RD K N+LLD D KL DFG AK E +++ +R
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 307 MGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHL 365
Y APE + TS DV+S G VL E+L G+ + +G LVE +
Sbjct: 188 -----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLG 240
Query: 366 GDKRRFYRLLD--------PRLEGH-----FSIKGSQKATQLAAQCLSRDPKAR 406
R R ++ P+++ H F + +A L ++ L P AR
Sbjct: 241 TPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 294
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 132/293 (45%), Gaps = 51/293 (17%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
++G G FG V++ + ++G VA+K + LQG E+ + L H
Sbjct: 27 VIGNGSFGVVYQAKLCDSGE---------LVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 200 NLVKLVGYCI-----EDDQRL-LVYEFMPRGS--LENHLFR-KGSLPLPWSIRMKIALGA 250
N+V+L + +D+ L LV +++P + H R K +LP+ I +K+ +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPV---IYVKLYMYQ 130
Query: 251 A-KGLAFLHEEAEKPVIYRDFKTSNILLDADYNA-KLSDFGLAKDAPEDGKTHVSTRVMG 308
+ LA++H + +RD K N+LLD D KL DFG AK G+ +VS +
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR-GEPNVSX--IC 184
Query: 309 TYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
+ Y APE + TS DV+S G VL E+L G+ + +G LVE + LG
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIK-VLGT 241
Query: 368 KRR---------FYRLLDPRLEGH-----FSIKGSQKATQLAAQCLSRDPKAR 406
R + P+++ H F + +A L ++ L P AR
Sbjct: 242 PTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 294
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 30/218 (13%)
Query: 135 FRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNF 192
++ S +G G +G V + VK +GL +AVK L+ + K E+
Sbjct: 53 YQTLSPVGSGAYGSVCSSY-------DVK--SGLKIAVKKLSRPFQSIIHAKRTYRELRL 103
Query: 193 LGNLLHPNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
L ++ H N++ L+ E + LV M G+ N++ + L ++ I
Sbjct: 104 LKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQFLI 160
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
+GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+TR
Sbjct: 161 -YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR- 215
Query: 307 MGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
Y APE ++ H D++S G ++ E+LTGR
Sbjct: 216 ----WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 130/292 (44%), Gaps = 49/292 (16%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 61 VIGNGSFGVVYQAKLCDSGE---------LVAIKKV----LQDKRFKNRELQIMRKLDHC 107
Query: 200 NLVKLVGYCIEDDQRL------LVYEFMPRG--SLENHLFR-KGSLPLPWSIRMKIALGA 250
N+V+L + ++ LV +++P + H R K +LP+ I +K+ +
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV---IYVKLYMYQ 164
Query: 251 A-KGLAFLHEEAEKPVIYRDFKTSNILLDADYNA-KLSDFGLAKDAPEDGKTHVSTRVMG 308
+ LA++H + +RD K N+LLD D KL DFG AK G+ +VS +
Sbjct: 165 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR-GEPNVSX--IC 218
Query: 309 TYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
+ Y APE + TS DV+S G VL E+L G+ + +G LVE +
Sbjct: 219 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTP 276
Query: 368 KRRFYRLLD--------PRLEGH-----FSIKGSQKATQLAAQCLSRDPKAR 406
R R ++ P+++ H F + +A L ++ L P AR
Sbjct: 277 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 328
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V E G VK + K L VNF P
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E+ P G + +HL R G P + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+++D +++DFG AK G+T + GT Y APE ++
Sbjct: 160 ---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTG 342
+ D ++ GV++ EM G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TG VAVK L+ + K E+ L ++ H
Sbjct: 26 VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCAKLTDD-HVQFLI-YQILR 132
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+TR Y
Sbjct: 133 GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 184
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 91/212 (42%), Gaps = 18/212 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E+G VK + K L VNF P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++ G + +HL R G P + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP 351
+ D ++ GV++ EM G ++P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 95/222 (42%), Gaps = 42/222 (18%)
Query: 139 SLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLL 197
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 33 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 198 HPNLVKLVG-------------YCIEDDQRLLVYEFMPRGSLEN-HLFRKGSLPLPWSIR 243
H N++ + Y ++D +Y+ + L N H+
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------------- 130
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA-PEDGKTHV 302
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ A P+ T
Sbjct: 131 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGR 343
+ T Y APE ++ +KS D++S G +L EML+ R
Sbjct: 188 LXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 95/222 (42%), Gaps = 42/222 (18%)
Query: 139 SLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGNLL 197
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 34 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 84
Query: 198 HPNLVKLVG-------------YCIEDDQRLLVYEFMPRGSLEN-HLFRKGSLPLPWSIR 243
H N++ + Y ++D +Y+ + L N H+
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI------------- 131
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDA-PEDGKTHV 302
+GL ++H V++RD K SN+LL+ + K+ DFGLA+ A P+ T
Sbjct: 132 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 188
Query: 303 STRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGR 343
+ T Y APE ++ +KS D++S G +L EML+ R
Sbjct: 189 LXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 43/229 (18%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE---WLAEVNFLGNLL 197
LG+G +G V+K + TG VAVK + D Q + E+ L L
Sbjct: 17 LGKGAYGIVWKS---------IDRRTGEVVAVKKI-FDAFQNSTDAQRTFREIMILTELS 66
Query: 198 -HPNLVKLVGYCIEDDQR--LLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGL 254
H N+V L+ D+ R LV+++M + H + ++ P + + K +
Sbjct: 67 GHENIVNLLNVLRADNDRDVYLVFDYM---ETDLHAVIRANILEPVH-KQYVVYQLIKVI 122
Query: 255 AFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPE------------------ 296
+LH +++RD K SNILL+A+ + K++DFGL++
Sbjct: 123 KYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTEN 179
Query: 297 -DGKTHVSTRVMGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
D + T + T Y APE ++ + T D++S G +L E+L G+
Sbjct: 180 FDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 89/203 (43%), Gaps = 18/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E+G VK + K L VNF P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++ G + +HL R G P + R A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHA-RF-YAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTG 342
+ D ++ GV++ EM G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 130/292 (44%), Gaps = 49/292 (16%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 65 VIGNGSFGVVYQAKLCDSGE---------LVAIKKV----LQDKRFKNRELQIMRKLDHC 111
Query: 200 NLVKLVGYCIEDDQRL------LVYEFMPRG--SLENHLFR-KGSLPLPWSIRMKIALGA 250
N+V+L + ++ LV +++P + H R K +LP+ I +K+ +
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV---IYVKLYMYQ 168
Query: 251 A-KGLAFLHEEAEKPVIYRDFKTSNILLDADYNA-KLSDFGLAKDAPEDGKTHVSTRVMG 308
+ LA++H + +RD K N+LLD D KL DFG AK G+ +VS +
Sbjct: 169 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR-GEPNVS--YIC 222
Query: 309 TYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
+ Y APE + TS DV+S G VL E+L G+ + +G LVE +
Sbjct: 223 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTP 280
Query: 368 KRRFYRLLD--------PRLEGH-----FSIKGSQKATQLAAQCLSRDPKAR 406
R R ++ P+++ H F + +A L ++ L P AR
Sbjct: 281 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 332
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 89/203 (43%), Gaps = 18/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E+G VK + K L VNF P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++ G + +HL R G P + R A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RF-YAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLAGTPEYLAPEIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTG 342
+ D ++ GV++ EM G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 130/292 (44%), Gaps = 49/292 (16%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 63 VIGNGSFGVVYQAKLCDSGE---------LVAIKKV----LQDKRFKNRELQIMRKLDHC 109
Query: 200 NLVKLVGYCIEDDQRL------LVYEFMPRG--SLENHLFR-KGSLPLPWSIRMKIALGA 250
N+V+L + ++ LV +++P + H R K +LP+ I +K+ +
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV---IYVKLYMYQ 166
Query: 251 A-KGLAFLHEEAEKPVIYRDFKTSNILLDADYNA-KLSDFGLAKDAPEDGKTHVSTRVMG 308
+ LA++H + +RD K N+LLD D KL DFG AK G+ +VS +
Sbjct: 167 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR-GEPNVS--YIC 220
Query: 309 TYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
+ Y APE + TS DV+S G VL E+L G+ + +G LVE +
Sbjct: 221 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTP 278
Query: 368 KRRFYRLLD--------PRLEGH-----FSIKGSQKATQLAAQCLSRDPKAR 406
R R ++ P+++ H F + +A L ++ L P AR
Sbjct: 279 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 330
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 88/203 (43%), Gaps = 18/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E+G VK + K L VNF P
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 103
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++ G + +HL R G P + A +LH
Sbjct: 104 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 160
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 161 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 212
Query: 320 TGHLTSKSDVYSFGVVLLEMLTG 342
+ D ++ GV++ EM G
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 89/203 (43%), Gaps = 18/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E+G VK + K L VNF P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++ G + +HL R G P + R A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RF-YAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTG 342
+ D ++ GV++ EM G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 130/292 (44%), Gaps = 49/292 (16%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 61 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 107
Query: 200 NLVKLVGYCIEDDQRL------LVYEFMPRG--SLENHLFR-KGSLPLPWSIRMKIALGA 250
N+V+L + ++ LV +++P + H R K +LP+ I +K+ +
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV---IYVKLYMYQ 164
Query: 251 A-KGLAFLHEEAEKPVIYRDFKTSNILLDADYNA-KLSDFGLAKDAPEDGKTHVSTRVMG 308
+ LA++H + +RD K N+LLD D KL DFG AK G+ +VS +
Sbjct: 165 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR-GEPNVS--YIC 218
Query: 309 TYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
+ Y APE + TS DV+S G VL E+L G+ + +G LVE +
Sbjct: 219 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTP 276
Query: 368 KRRFYRLLD--------PRLEGH-----FSIKGSQKATQLAAQCLSRDPKAR 406
R R ++ P+++ H F + +A L ++ L P AR
Sbjct: 277 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 328
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 89/203 (43%), Gaps = 18/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E+G VK + K L VNF P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++ G + +HL R G P + R A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RF-YAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTG 342
+ D ++ GV++ EM G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 20/206 (9%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
+LG G FG V K EE T GL +A K + G++ +E E++ + L H
Sbjct: 96 ILGGGRFGQVHK--CEETAT-------GLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHA 146
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
NL++L + +LV E++ G L + + + S L + +G+ +H
Sbjct: 147 NLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDE-SYNLTELDTILFMKQICEGIRHMH- 204
Query: 260 EAEKPVIYRDFKTSNILL---DADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPE 316
+ +++ D K NIL DA K+ DFGLA+ K V+ GT + APE
Sbjct: 205 --QMYILHLDLKPENILCVNRDAK-QIKIIDFGLARRYKPREKLKVN---FGTPEFLAPE 258
Query: 317 YVMTGHLTSKSDVYSFGVVLLEMLTG 342
V ++ +D++S GV+ +L+G
Sbjct: 259 VVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 89/203 (43%), Gaps = 18/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E+G VK + K L VNF P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++ G + +HL R G P + R A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RF-YAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLXGTPEYLAPEIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTG 342
+ D ++ GV++ EM G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TG VAVK L+ + K E+ L ++ H
Sbjct: 36 VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 86
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQFLI-YQILR 142
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+TR Y
Sbjct: 143 GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 194
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 91/212 (42%), Gaps = 18/212 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E+G VK + K L VNF P
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 89
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++ G + +HL R G P + A +LH
Sbjct: 90 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 146
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 147 ---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 198
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP 351
+ D ++ GV++ EM G ++P
Sbjct: 199 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 230
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 130/292 (44%), Gaps = 49/292 (16%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 106 VIGNGSFGVVYQAKLCDSGE---------LVAIKKV----LQDKRFKNRELQIMRKLDHC 152
Query: 200 NLVKLVGYCIEDDQRL------LVYEFMPRG--SLENHLFR-KGSLPLPWSIRMKIALGA 250
N+V+L + ++ LV +++P + H R K +LP+ I +K+ +
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV---IYVKLYMYQ 209
Query: 251 A-KGLAFLHEEAEKPVIYRDFKTSNILLDADYNA-KLSDFGLAKDAPEDGKTHVSTRVMG 308
+ LA++H + +RD K N+LLD D KL DFG AK G+ +VS +
Sbjct: 210 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR-GEPNVS--YIC 263
Query: 309 TYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
+ Y APE + TS DV+S G VL E+L G+ + +G LVE +
Sbjct: 264 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTP 321
Query: 368 KRRFYRLLD--------PRLEGH-----FSIKGSQKATQLAAQCLSRDPKAR 406
R R ++ P+++ H F + +A L ++ L P AR
Sbjct: 322 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 373
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 132/292 (45%), Gaps = 49/292 (16%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 46 VIGNGSFGVVYQAKLCDSGE---------LVAIKKV----LQDKRFKNRELQIMRKLDHC 92
Query: 200 NLVKLVGYCI-----EDDQRL-LVYEFMPRGS--LENHLFR-KGSLPLPWSIRMKIALGA 250
N+V+L + +D+ L LV +++P + H R K +LP+ I +K+ +
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV---IYVKLYMYQ 149
Query: 251 A-KGLAFLHEEAEKPVIYRDFKTSNILLDADYNA-KLSDFGLAKDAPEDGKTHVSTRVMG 308
+ LA++H + +RD K N+LLD D KL DFG AK G+ +VS +
Sbjct: 150 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR-GEPNVSX--IC 203
Query: 309 TYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
+ Y APE + TS DV+S G VL E+L G+ + +G LVE +
Sbjct: 204 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTP 261
Query: 368 KRRFYRLLD--------PRLEGH-----FSIKGSQKATQLAAQCLSRDPKAR 406
R R ++ P+++ H F + +A L ++ L P AR
Sbjct: 262 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 313
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 92/212 (43%), Gaps = 18/212 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E+G VK + K L VNF P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++ G + +HL R G P + R A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RF-YAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP 351
+ D ++ GV++ EM G ++P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 88/203 (43%), Gaps = 18/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E+G VK + K L VNF P
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 97
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++ G + +HL R G P + A +LH
Sbjct: 98 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHA--RFYAAQIVLTFEYLHS 154
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 155 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 206
Query: 320 TGHLTSKSDVYSFGVVLLEMLTG 342
+ D ++ GV++ EM G
Sbjct: 207 SKGYNKAVDWWALGVLIYEMAAG 229
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 89/203 (43%), Gaps = 18/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E+G VK + K L VNF P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++ G + +HL R G P + R A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RF-YAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTG 342
+ D ++ GV++ EM G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 132/292 (45%), Gaps = 49/292 (16%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 55 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 101
Query: 200 NLVKLVGYCI-----EDDQRL-LVYEFMPRG--SLENHLFR-KGSLPLPWSIRMKIALGA 250
N+V+L + +D+ L LV +++P + H R K +LP+ I +K+ +
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV---IYVKLYMYQ 158
Query: 251 A-KGLAFLHEEAEKPVIYRDFKTSNILLDADYNA-KLSDFGLAKDAPEDGKTHVSTRVMG 308
+ LA++H + +RD K N+LLD D KL DFG AK G+ +VS +
Sbjct: 159 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR-GEPNVS--YIC 212
Query: 309 TYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
+ Y APE + TS DV+S G VL E+L G+ + +G LVE +
Sbjct: 213 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTP 270
Query: 368 KRRFYRLLD--------PRLEGH-----FSIKGSQKATQLAAQCLSRDPKAR 406
R R ++ P+++ H F + +A L ++ L P AR
Sbjct: 271 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 322
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TG VAVK L+ + K E+ L ++ H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQFLI-YQILR 136
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+TR Y
Sbjct: 137 GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 89/203 (43%), Gaps = 18/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E+G VK + K L VNF P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++ G + +HL R G P + R A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHA-RF-YAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTG 342
+ D ++ GV++ EM G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 94/222 (42%), Gaps = 51/222 (22%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH---KEWLAEVNFLGNLL 197
+G G +G V + + +G VA+K L+ Q K E+ L ++
Sbjct: 32 VGSGAYGSV---------CSAIDKRSGEKVAIKKLSR-PFQSEIFAKRAYRELLLLKHMQ 81
Query: 198 HPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFL 257
H N++ L+ F P SL N F L +P+ M+ L GL F
Sbjct: 82 HENVIGLLDV------------FTPASSLRN--FYDFYLVMPF---MQTDLQKIMGLKFS 124
Query: 258 HEEAE---------------KPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
E+ + V++RD K N+ ++ D K+ DFGLA+ A + +V
Sbjct: 125 EEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYV 184
Query: 303 STRVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
TR Y APE +++ H D++S G ++ EMLTG+
Sbjct: 185 VTR-----WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 85/203 (41%), Gaps = 18/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V E G VK + K L VNF P
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 103
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
L KL + +D+ L +V E+ P G + +HL R G P + A +LH
Sbjct: 104 LTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 160
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+++D K++DFG AK G+T + GT Y APE ++
Sbjct: 161 ---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 212
Query: 320 TGHLTSKSDVYSFGVVLLEMLTG 342
+ D ++ GV++ EM G
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TG VAVK L+ + K E+ L ++ H
Sbjct: 40 VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 90
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 91 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQFLI-YQILR 146
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+TR Y
Sbjct: 147 GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 198
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 199 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 132/292 (45%), Gaps = 49/292 (16%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 35 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 81
Query: 200 NLVKLVGYCI-----EDDQRL-LVYEFMPRGS--LENHLFR-KGSLPLPWSIRMKIALGA 250
N+V+L + +D+ L LV +++P + H R K +LP+ I +K+ +
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV---IYVKLYMYQ 138
Query: 251 A-KGLAFLHEEAEKPVIYRDFKTSNILLDADYNA-KLSDFGLAKDAPEDGKTHVSTRVMG 308
+ LA++H + +RD K N+LLD D KL DFG AK G+ +VS +
Sbjct: 139 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR-GEPNVSX--IC 192
Query: 309 TYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
+ Y APE + TS DV+S G VL E+L G+ + +G LVE +
Sbjct: 193 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTP 250
Query: 368 KRRFYRLLD--------PRLEGH-----FSIKGSQKATQLAAQCLSRDPKAR 406
R R ++ P+++ H F + +A L ++ L P AR
Sbjct: 251 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 302
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 89/203 (43%), Gaps = 18/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E+G VK + K L VNF P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++ G + +HL R G P + R A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHA-RF-YAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTG 342
+ D ++ GV++ EM G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 85/203 (41%), Gaps = 18/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V E G VK + K L VNF P
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 103
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
L KL + +D+ L +V E+ P G + +HL R G P + A +LH
Sbjct: 104 LTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 160
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+++D K++DFG AK G+T + GT Y APE ++
Sbjct: 161 ---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 212
Query: 320 TGHLTSKSDVYSFGVVLLEMLTG 342
+ D ++ GV++ EM G
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 21/183 (11%)
Query: 170 VAVKTLNH--DGLQGHKEWLAEVNFLGNLLHPNLVKLV-----GYCIED-DQRLLVYEFM 221
VAVK L+ L + E+ L +L H N++ L+ IED + LV M
Sbjct: 56 VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM 115
Query: 222 PRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADY 281
G+ N++ + +L + L +GL ++H +I+RD K SN+ ++ D
Sbjct: 116 --GADLNNIVKSQALSDEHVQFLVYQL--LRGLKYIHSAG---IIHRDLKPSNVAVNEDS 168
Query: 282 NAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEML 340
++ DFGLA+ A E+ +V+TR Y APE ++ H D++S G ++ E+L
Sbjct: 169 ELRILDFGLARQADEEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
Query: 341 TGR 343
G+
Sbjct: 224 QGK 226
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 252 KGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYG 311
KGL ++H V++RD K N+ ++ D K+ DFGLA+ A + +V TR
Sbjct: 155 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----W 206
Query: 312 YAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
Y APE +++ H D++S G ++ EMLTG+
Sbjct: 207 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 88/203 (43%), Gaps = 18/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E+G VK + K L VNF P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++ G + +HL R G P + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHA--RFYAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTG 342
+ D ++ GV++ EM G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 132/292 (45%), Gaps = 49/292 (16%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 39 VIGNGSFGVVYQAKLCDSGE---------LVAIKKV----LQDKRFKNRELQIMRKLDHC 85
Query: 200 NLVKLVGYCI-----EDDQRL-LVYEFMPRG--SLENHLFR-KGSLPLPWSIRMKIALGA 250
N+V+L + +D+ L LV +++P + H R K +LP+ I +K+ +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV---IYVKLYMYQ 142
Query: 251 A-KGLAFLHEEAEKPVIYRDFKTSNILLDADYNA-KLSDFGLAKDAPEDGKTHVSTRVMG 308
+ LA++H + +RD K N+LLD D KL DFG AK G+ +VS +
Sbjct: 143 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR-GEPNVSX--IC 196
Query: 309 TYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
+ Y APE + TS DV+S G VL E+L G+ + +G LVE +
Sbjct: 197 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTP 254
Query: 368 KRRFYRLLD--------PRLEGH-----FSIKGSQKATQLAAQCLSRDPKAR 406
R R ++ P+++ H F + +A L ++ L P AR
Sbjct: 255 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 306
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 32/225 (14%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEV-- 190
+ + P+ ++G G V + V TG AVK + + E L EV
Sbjct: 94 QKYDPKDVIGRGVSSVVRRC---------VHRATGHEFAVKIMEVTAERLSPEQLEEVRE 144
Query: 191 ------NFLGNLL-HPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIR 243
+ L + HP+++ L+ LV++ M +G L ++L K +L +
Sbjct: 145 ATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKET-- 202
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVS 303
I + ++FLH +++RD K NILLD + +LSDFG + K
Sbjct: 203 RSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR-- 257
Query: 304 TRVMGTYGYAAPEYVMTGHLTS------KSDVYSFGVVLLEMLTG 342
+ GT GY APE + + + D+++ GV+L +L G
Sbjct: 258 -ELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TG VAVK L+ + K E+ L ++ H
Sbjct: 50 VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 100
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQFLI-YQILR 156
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+TR Y
Sbjct: 157 GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 208
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TG VAVK L+ + K E+ L ++ H
Sbjct: 49 VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 99
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQFLI-YQILR 155
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+TR Y
Sbjct: 156 GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 207
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 132/292 (45%), Gaps = 49/292 (16%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 40 VIGNGSFGVVYQAKLCDSGE---------LVAIKKV----LQDKRFKNRELQIMRKLDHC 86
Query: 200 NLVKLVGYCI-----EDDQRL-LVYEFMPRGS--LENHLFR-KGSLPLPWSIRMKIALGA 250
N+V+L + +D+ L LV +++P + H R K +LP+ I +K+ +
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV---IYVKLYMYQ 143
Query: 251 A-KGLAFLHEEAEKPVIYRDFKTSNILLDADYNA-KLSDFGLAKDAPEDGKTHVSTRVMG 308
+ LA++H + +RD K N+LLD D KL DFG AK G+ +VS +
Sbjct: 144 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR-GEPNVS--YIC 197
Query: 309 TYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
+ Y APE + TS DV+S G VL E+L G+ + +G LVE +
Sbjct: 198 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTP 255
Query: 368 KRRFYRLLD--------PRLEGH-----FSIKGSQKATQLAAQCLSRDPKAR 406
R R ++ P+++ H F + +A L ++ L P AR
Sbjct: 256 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 307
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 91/212 (42%), Gaps = 18/212 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E+G VK + K L VNF P
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 123
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++ G + +HL R G P + A +LH
Sbjct: 124 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHA--RFYAAQIVLTFEYLHS 180
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 181 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 232
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP 351
+ D ++ GV++ EM G ++P
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TG VAVK L+ + K E+ L ++ H
Sbjct: 26 VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQFLI-YQILR 132
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ +V+TR Y
Sbjct: 133 GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 184
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 132/292 (45%), Gaps = 49/292 (16%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 39 VIGNGSFGVVYQAKLCDSGE---------LVAIKKV----LQDKRFKNRELQIMRKLDHC 85
Query: 200 NLVKLVGYCI-----EDDQRL-LVYEFMPRG--SLENHLFR-KGSLPLPWSIRMKIALGA 250
N+V+L + +D+ L LV +++P + H R K +LP+ I +K+ +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV---IYVKLYMYQ 142
Query: 251 A-KGLAFLHEEAEKPVIYRDFKTSNILLDADYNA-KLSDFGLAKDAPEDGKTHVSTRVMG 308
+ LA++H + +RD K N+LLD D KL DFG AK G+ +VS +
Sbjct: 143 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR-GEPNVSX--IC 196
Query: 309 TYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
+ Y APE + TS DV+S G VL E+L G+ + +G LVE +
Sbjct: 197 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTP 254
Query: 368 KRRFYRLLD--------PRLEGH-----FSIKGSQKATQLAAQCLSRDPKAR 406
R R ++ P+++ H F + +A L ++ L P AR
Sbjct: 255 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 306
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 85/203 (41%), Gaps = 18/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V E G VK + K L VNF P
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 103
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
L KL + +D+ L +V E+ P G + +HL R G P + A +LH
Sbjct: 104 LTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHA--RFYAAQIVLTFEYLHS 160
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+++D K++DFG AK G+T + GT Y APE ++
Sbjct: 161 ---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 212
Query: 320 TGHLTSKSDVYSFGVVLLEMLTG 342
+ D ++ GV++ EM G
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 132/292 (45%), Gaps = 49/292 (16%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 27 VIGNGSFGVVYQAKLCDSGE---------LVAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 200 NLVKLVGYCI-----EDDQRL-LVYEFMPRGS--LENHLFR-KGSLPLPWSIRMKIALGA 250
N+V+L + +D+ L LV +++P + H R K +LP+ I +K+ +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV---IYVKLYMYQ 130
Query: 251 A-KGLAFLHEEAEKPVIYRDFKTSNILLDADYNA-KLSDFGLAKDAPEDGKTHVSTRVMG 308
+ LA++H + +RD K N+LLD D KL DFG AK G+ +VS +
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR-GEPNVSX--IC 184
Query: 309 TYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
+ Y APE + TS DV+S G VL E+L G+ + +G LVE +
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTP 242
Query: 368 KRRFYRLLD--------PRLEGH-----FSIKGSQKATQLAAQCLSRDPKAR 406
R R ++ P+++ H F + +A L ++ L P AR
Sbjct: 243 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 294
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 33/220 (15%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 190
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 25 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 191 NFLGNLLHPNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
L ++ H N++ L+ E + LV M G+ N++ + L ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQF 129
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
I +GL ++H +I+RD K SN+ ++ D K+ FGLA+ ++ +V+T
Sbjct: 130 LI-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVAT 185
Query: 305 RVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
R Y APE ++ H D++S G ++ E+LTGR
Sbjct: 186 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 90/213 (42%), Gaps = 23/213 (10%)
Query: 135 FRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFL 193
F + LG G F V + TG AVK + L+G + + E+ L
Sbjct: 24 FEFKETLGTGAFSEV---------VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVL 74
Query: 194 GNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKG-SLPLPWSIRMKIALGAAK 252
+ H N+V L + LV + + G L + + KG S ++ L A
Sbjct: 75 RKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDA-- 132
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILL---DADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+ +LH +++RD K N+L D + +SDFGL+K +GK V + GT
Sbjct: 133 -VYYLHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSK---MEGKGDVMSTACGT 185
Query: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
GY APE + + D +S GV+ +L G
Sbjct: 186 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 33/226 (14%)
Query: 127 DLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH--- 183
+++ R+ +P +G G +G V + V TG VA+K L + Q
Sbjct: 22 EVRAVYRDLQP---VGSGAYGAV---------CSAVDGRTGAKVAIKKL-YRPFQSELFA 68
Query: 184 KEWLAEVNFLGNLLHPNLVKLVGYCIED---DQRLLVYEFMP-RGSLENHLFRKGSLPLP 239
K E+ L ++ H N++ L+ D D Y MP G+ L + L
Sbjct: 69 KRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLG-- 126
Query: 240 WSIRMK-IALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDG 298
R++ + KGL ++H +I+RD K N+ ++ D K+ DFGLA+ A +
Sbjct: 127 -EDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEM 182
Query: 299 KTHVSTRVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
V TR Y APE ++ T D++S G ++ EM+TG+
Sbjct: 183 XGXVVTR-----WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 252 KGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYG 311
+GL ++H +I+RD K SN+ ++ D ++ DFGLA+ A E+ +V+TR
Sbjct: 134 RGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----W 185
Query: 312 YAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
Y APE ++ H D++S G ++ E+L G+
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 132/292 (45%), Gaps = 49/292 (16%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 32 VIGNGSFGVVYQAKLCDSGE---------LVAIKKV----LQDKRFKNRELQIMRKLDHC 78
Query: 200 NLVKLVGYCI-----EDDQRL-LVYEFMPRGS--LENHLFR-KGSLPLPWSIRMKIALGA 250
N+V+L + +D+ L LV +++P + H R K +LP+ I +K+ +
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV---IYVKLYMYQ 135
Query: 251 A-KGLAFLHEEAEKPVIYRDFKTSNILLDADYNA-KLSDFGLAKDAPEDGKTHVSTRVMG 308
+ LA++H + +RD K N+LLD D KL DFG AK G+ +VS +
Sbjct: 136 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR-GEPNVS--YIC 189
Query: 309 TYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
+ Y APE + TS DV+S G VL E+L G+ + +G LVE +
Sbjct: 190 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTP 247
Query: 368 KRRFYRLLD--------PRLEGH-----FSIKGSQKATQLAAQCLSRDPKAR 406
R R ++ P+++ H F + +A L ++ L P AR
Sbjct: 248 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 299
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 132/292 (45%), Gaps = 49/292 (16%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 200 NLVKLVGYCI-----EDDQRL-LVYEFMPRGS--LENHLFR-KGSLPLPWSIRMKIALGA 250
N+V+L + +D+ L LV +++P + H R K +LP+ I +K+ +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV---IYVKLYMYQ 130
Query: 251 A-KGLAFLHEEAEKPVIYRDFKTSNILLDADYNA-KLSDFGLAKDAPEDGKTHVSTRVMG 308
+ LA++H + +RD K N+LLD D KL DFG AK G+ +VS +
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR-GEPNVSX--IC 184
Query: 309 TYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
+ Y APE + TS DV+S G VL E+L G+ + +G LVE +
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTP 242
Query: 368 KRRFYRLLD--------PRLEGH-----FSIKGSQKATQLAAQCLSRDPKAR 406
R R ++ P+++ H F + +A L ++ L P AR
Sbjct: 243 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 294
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 33/220 (15%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 190
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 25 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 191 NFLGNLLHPNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
L ++ H N++ L+ E + LV M G+ N++ + L ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQF 129
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
I +GL ++H +I+RD K SN+ ++ D K+ D GLA+ ++ +V+T
Sbjct: 130 LI-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVAT 185
Query: 305 RVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
R Y APE ++ H D++S G ++ E+LTGR
Sbjct: 186 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 132/292 (45%), Gaps = 49/292 (16%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 28 VIGNGSFGVVYQAKLCDSGE---------LVAIKKV----LQDKRFKNRELQIMRKLDHC 74
Query: 200 NLVKLVGYCI-----EDDQRL-LVYEFMPRGS--LENHLFR-KGSLPLPWSIRMKIALGA 250
N+V+L + +D+ L LV +++P + H R K +LP+ I +K+ +
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV---IYVKLYMYQ 131
Query: 251 A-KGLAFLHEEAEKPVIYRDFKTSNILLDADYNA-KLSDFGLAKDAPEDGKTHVSTRVMG 308
+ LA++H + +RD K N+LLD D KL DFG AK G+ +VS +
Sbjct: 132 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR-GEPNVSX--IC 185
Query: 309 TYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
+ Y APE + TS DV+S G VL E+L G+ + +G LVE +
Sbjct: 186 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTP 243
Query: 368 KRRFYRLLD--------PRLEGH-----FSIKGSQKATQLAAQCLSRDPKAR 406
R R ++ P+++ H F + +A L ++ L P AR
Sbjct: 244 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 295
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 88/203 (43%), Gaps = 18/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E+G VK + K L VNF P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++ G + +HL R G P + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+++D +++DFG AK G+T + GT Y APE ++
Sbjct: 160 ---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIII 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTG 342
+ D ++ GV++ EM G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 130/292 (44%), Gaps = 49/292 (16%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 200 NLVKLVGYCIEDDQRL------LVYEFMPRGS--LENHLFR-KGSLPLPWSIRMKIALGA 250
N+V+L + ++ LV +++P + H R K +LP+ I +K+ +
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPV---IYVKLYMYQ 130
Query: 251 A-KGLAFLHEEAEKPVIYRDFKTSNILLDADYNA-KLSDFGLAKDAPEDGKTHVSTRVMG 308
+ LA++H + +RD K N+LLD D KL DFG AK G+ +VS +
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR-GEPNVSX--IC 184
Query: 309 TYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
+ Y APE + TS DV+S G VL E+L G+ + +G LVE +
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTP 242
Query: 368 KRRFYRLLD--------PRLEGH-----FSIKGSQKATQLAAQCLSRDPKAR 406
R R ++ P+++ H F + +A L ++ L P AR
Sbjct: 243 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 294
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 252 KGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYG 311
+GL ++H +I+RD K SN+ ++ D ++ DFGLA+ A E+ +V+TR
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----W 193
Query: 312 YAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
Y APE ++ H D++S G ++ E+L G+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 132/292 (45%), Gaps = 49/292 (16%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 27 VIGNGSFGVVYQAKLCDSGE---------LVAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 200 NLVKLVGYCI-----EDDQRL-LVYEFMPRGS--LENHLFR-KGSLPLPWSIRMKIALGA 250
N+V+L + +D+ L LV +++P + H R K +LP+ I +K+ +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV---IYVKLYMYQ 130
Query: 251 A-KGLAFLHEEAEKPVIYRDFKTSNILLDADYNA-KLSDFGLAKDAPEDGKTHVSTRVMG 308
+ LA++H + +RD K N+LLD D KL DFG AK G+ +VS +
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR-GEPNVS--YIC 184
Query: 309 TYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
+ Y APE + TS DV+S G VL E+L G+ + +G LVE +
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTP 242
Query: 368 KRRFYRLLD--------PRLEGH-----FSIKGSQKATQLAAQCLSRDPKAR 406
R R ++ P+++ H F + +A L ++ L P AR
Sbjct: 243 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 294
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 90/212 (42%), Gaps = 18/212 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E+G VK + K L VNF P
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 123
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++ G + +HL R G P + A +LH
Sbjct: 124 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 180
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G T + GT Y APE ++
Sbjct: 181 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GATWT---LCGTPEYLAPEIIL 232
Query: 320 TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP 351
+ D ++ GV++ EM G ++P
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 132/292 (45%), Gaps = 49/292 (16%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 31 VIGNGSFGVVYQAKLCDSGE---------LVAIKKV----LQDKRFKNRELQIMRKLDHC 77
Query: 200 NLVKLVGYCI-----EDDQRL-LVYEFMPRGS--LENHLFR-KGSLPLPWSIRMKIALGA 250
N+V+L + +D+ L LV +++P + H R K +LP+ I +K+ +
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV---IYVKLYMYQ 134
Query: 251 A-KGLAFLHEEAEKPVIYRDFKTSNILLDADYNA-KLSDFGLAKDAPEDGKTHVSTRVMG 308
+ LA++H + +RD K N+LLD D KL DFG AK G+ +VS +
Sbjct: 135 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR-GEPNVSX--IC 188
Query: 309 TYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
+ Y APE + TS DV+S G VL E+L G+ + +G LVE +
Sbjct: 189 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVLGTP 246
Query: 368 KRRFYRLLD--------PRLEGH-----FSIKGSQKATQLAAQCLSRDPKAR 406
R R ++ P+++ H F + +A L ++ L P AR
Sbjct: 247 TREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 298
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TGL VAVK L+ + K E+ L ++ H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQFLI-YQILR 136
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ D GLA+ ++ +V+TR Y
Sbjct: 137 GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR-----WY 188
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 19/209 (9%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKT--LNHDGLQGHKEWLAEVNFLGNLLH 198
+GEG +G VFK E T VA+K L+ D L E+ L L H
Sbjct: 10 IGEGTYGTVFKAKNRE---------THEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLH 258
N+V+L D + LV+EF + L+ + F + L I KGL F H
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKY-FDSCNGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 259 EEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYV 318
+ V++RD K N+L++ + KL++FGLA+ + + + V T Y P+ +
Sbjct: 119 S---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV--TLWYRPPDVL 173
Query: 319 MTGHLTSKS-DVYSFGVVLLEMLTGRRSM 346
L S S D++S G + E+ R +
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 89/203 (43%), Gaps = 18/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E+G VK + K L VNF P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++ G + +HL R G P + R A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RF-YAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTG 342
+ D ++ GV++ +M G
Sbjct: 212 SKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 98/239 (41%), Gaps = 41/239 (17%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVN 191
N+ + L+G G +G V+ + T VA+K +N + L K L E+
Sbjct: 27 NYIIKHLIGRGSYGYVYLAY---------DKNTEKNVAIKKVNRMFEDLIDCKRILREIT 77
Query: 192 FLGNLLHPNLVKLVGYCIEDD----QRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
L L +++L I DD L + + L+ LF+ I+ I
Sbjct: 78 ILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKK-LFKTPIFLTEEHIKT-IL 135
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVS---- 303
G F+HE +I+RD K +N LL+ D + K+ DFGLA+ + T++
Sbjct: 136 YNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLE 192
Query: 304 ----------------TRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGRRS 345
T + T Y APE ++ +KS D++S G + E+L +S
Sbjct: 193 ENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS 251
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 24/215 (11%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLAEVN 191
N+ + LG+G F V + V TGL A K +N L ++ E
Sbjct: 6 NYDVKEELGKGAFSVVRRC---------VHKTTGLEFAAKIINTKKLSARDFQKLEREAR 56
Query: 192 FLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSL-ENHLFRKGSLPLPWSIRMKIALGA 250
L HPN+V+L E+ LV++ + G L E+ + R+ S ++ L
Sbjct: 57 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL-- 114
Query: 251 AKGLAFLHEEAEKPVIYRDFKTSNILLDADYN---AKLSDFGLAKDAPEDGKTHVSTRVM 307
+ +A+ H +++R+ K N+LL + KL+DFGLA + + H
Sbjct: 115 -ESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFA 167
Query: 308 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
GT GY +PE + + D+++ GV+L +L G
Sbjct: 168 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TG VAVK L+ + K E+ L ++ H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQFLI-YQILR 136
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ V+TR Y
Sbjct: 137 GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WY 188
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 102/250 (40%), Gaps = 46/250 (18%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVN 191
N+ + L+G G +G V+ + ++N VA+K +N + L K L E+
Sbjct: 29 NYEIKHLIGRGSYGYVYLAY-DKNANK--------NVAIKKVNRMFEDLIDCKRILREIT 79
Query: 192 FLGNLLHPNLVKLVGYCI-ED----DQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
L L +++L I ED D+ +V E S LF+ ++ I
Sbjct: 80 ILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIA--DSDLKKLFKTPIFLTEQHVKT-I 136
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVS--- 303
G F+HE +I+RD K +N LL+ D + K+ DFGLA+ D H+
Sbjct: 137 LYNLLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDL 193
Query: 304 --------------------TRVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTG 342
T + T Y APE ++ + T+ D++S G + E+L
Sbjct: 194 EEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNM 253
Query: 343 RRSMDKNRPN 352
+S N N
Sbjct: 254 MKSHINNPTN 263
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TG VAVK L+ + K E+ L ++ H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQFLI-YQILR 136
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ V+TR Y
Sbjct: 137 GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WY 188
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 70/172 (40%), Gaps = 22/172 (12%)
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
+ AKG+ FL A + I+RD NILL K+ DFGLA+D +D
Sbjct: 199 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255
Query: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
+ APE + T +SDV+SFGV+L E+ + A P+ G
Sbjct: 256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASPYPG 298
Query: 367 DK--RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETL 416
K F R L + + Q C +P RP SE+VE L
Sbjct: 299 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 24/215 (11%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLAEVN 191
N+ + LG+G F V + V TGL A K +N L ++ E
Sbjct: 7 NYDVKEELGKGAFSVVRRC---------VHKTTGLEFAAKIINTKKLSARDFQKLEREAR 57
Query: 192 FLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSL-ENHLFRKGSLPLPWSIRMKIALGA 250
L HPN+V+L E+ LV++ + G L E+ + R+ S ++ L
Sbjct: 58 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL-- 115
Query: 251 AKGLAFLHEEAEKPVIYRDFKTSNILLDADYN---AKLSDFGLAKDAPEDGKTHVSTRVM 307
+ +A+ H +++R+ K N+LL + KL+DFGLA + + H
Sbjct: 116 -ESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFA 168
Query: 308 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
GT GY +PE + + D+++ GV+L +L G
Sbjct: 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V E G VK + K L VNF P
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++ G + +HL R G P + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y APE ++
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPEIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTG 342
+ D ++ GV++ EM G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 20/212 (9%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V ++ + TG VA+K + + D + K L E+ L + H
Sbjct: 63 IGNGAYGVV---------SSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKH 113
Query: 199 PNLVKLVGY---CIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLA 255
N++ + + + VY + + H S PL +GL
Sbjct: 114 DNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLK 173
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTH--VSTRVMGTYGYA 313
++H VI+RD K SN+L++ + K+ DFG+A+ H T + T Y
Sbjct: 174 YMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 230
Query: 314 APEYVMTGH-LTSKSDVYSFGVVLLEMLTGRR 344
APE +++ H T D++S G + EML R+
Sbjct: 231 APELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 70/172 (40%), Gaps = 22/172 (12%)
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
+ AKG+ FL A + I+RD NILL K+ DFGLA+D +D
Sbjct: 204 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 260
Query: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
+ APE + T +SDV+SFGV+L E+ + A P+ G
Sbjct: 261 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASPYPG 303
Query: 367 DK--RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETL 416
K F R L + + Q C +P RP SE+VE L
Sbjct: 304 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 70/172 (40%), Gaps = 22/172 (12%)
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
+ AKG+ FL A + I+RD NILL K+ DFGLA+D +D
Sbjct: 206 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 262
Query: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
+ APE + T +SDV+SFGV+L E+ + A P+ G
Sbjct: 263 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASPYPG 305
Query: 367 DK--RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETL 416
K F R L + + Q C +P RP SE+VE L
Sbjct: 306 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 33/220 (15%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 190
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 25 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 191 NFLGNLLHPNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRM 244
L ++ H N++ L+ E + LV M G+ N++ + L ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQF 129
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVST 304
I +GL ++H +I+RD K SN+ ++ D K+ D GLA+ ++ +V+T
Sbjct: 130 LI-YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVAT 185
Query: 305 RVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
R Y APE ++ H D++S G ++ E+LTGR
Sbjct: 186 R-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TG VAVK L+ + K E+ L ++ H
Sbjct: 50 VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 100
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQFLI-YQILR 156
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ V+TR Y
Sbjct: 157 GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR-----WY 208
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 24/215 (11%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLAEVN 191
N+ + LG+G F V + V TGL A K +N L ++ E
Sbjct: 7 NYDVKEELGKGAFSVVRRC---------VHKTTGLEFAAKIINTKKLSARDFQKLEREAR 57
Query: 192 FLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSL-ENHLFRKGSLPLPWSIRMKIALGA 250
L HPN+V+L E+ LV++ + G L E+ + R+ S ++ L
Sbjct: 58 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL-- 115
Query: 251 AKGLAFLHEEAEKPVIYRDFKTSNILLDADYN---AKLSDFGLAKDAPEDGKTHVSTRVM 307
+ +A+ H +++R+ K N+LL + KL+DFGLA + + H
Sbjct: 116 -ESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFA 168
Query: 308 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
GT GY +PE + + D+++ GV+L +L G
Sbjct: 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 26/182 (14%)
Query: 238 LPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPED 297
+P I KIA+ K L LH + VI+RD K SN+L++A K DFG++ +D
Sbjct: 133 IPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDD 190
Query: 298 GKTHVSTRVMGTYGYAAPEYV-----MTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPN 352
+ G Y APE + G+ + KSD++S G+ +E+ R D
Sbjct: 191 VAKDIDA---GCKPYXAPERINPELNQKGY-SVKSDIWSLGITXIELAILRFPYDS---- 242
Query: 353 GEHNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
W P ++ P+L K S + +QCL ++ K RP E+
Sbjct: 243 -------WGTP-FQQLKQVVEEPSPQLPAD---KFSAEFVDFTSQCLKKNSKERPTYPEL 291
Query: 413 VE 414
+
Sbjct: 292 XQ 293
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 70/172 (40%), Gaps = 22/172 (12%)
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
+ AKG+ FL A + I+RD NILL K+ DFGLA+D +D
Sbjct: 197 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 253
Query: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
+ APE + T +SDV+SFGV+L E+ + A P+ G
Sbjct: 254 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-----------------ASPYPG 296
Query: 367 DK--RRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETL 416
K F R L + + Q C +P RP SE+VE L
Sbjct: 297 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 81/182 (44%), Gaps = 16/182 (8%)
Query: 166 TGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGS 225
TG AVK + + + + E+ L P +V L G E + E + GS
Sbjct: 82 TGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGS 136
Query: 226 LENHLFRKGSLPLPWSIRMKIALGAA-KGLAFLHEEAEKPVIYRDFKTSNILLDADYN-A 283
L + + G LP R LG A +GL +LH + +++ D K N+LL +D + A
Sbjct: 137 LGQLIKQMGCLP---EDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRA 190
Query: 284 KLSDFGLAKDAPEDG---KTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEML 340
L DFG A DG + GT + APE VM +K D++S ++L ML
Sbjct: 191 ALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHML 250
Query: 341 TG 342
G
Sbjct: 251 NG 252
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 120/302 (39%), Gaps = 43/302 (14%)
Query: 125 FNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK 184
F + + R + +G GG VF+ E+ +K V ++ ++ L ++
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYR 74
Query: 185 EWLAEVNFLGNLLHPN-LVKLVGYCIEDDQRLLVYEFMPRGSLE-NHLFRKGSLPLPWSI 242
+A +N L H + +++L Y I D +Y M G+++ N +K PW
Sbjct: 75 NEIAYLNKLQQ--HSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWE- 128
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
R + + +H+ +++ D K +N L+ D KL DFG+A D + V
Sbjct: 129 RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVV 184
Query: 303 STRVMGTYGYAAPEYV-----------MTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP 351
+GT Y PE + ++ KSDV+S G +L M G+ +
Sbjct: 185 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-- 242
Query: 352 NGEHNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSE 411
+ + + ++DP E F + + CL RDPK R + E
Sbjct: 243 -------------INQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 289
Query: 412 VV 413
++
Sbjct: 290 LL 291
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 102/240 (42%), Gaps = 36/240 (15%)
Query: 198 HPNLVKLVGYCIED----DQRLLVYEFMPRGSLENHLFR---KGSLPLPWSIRMKIALGA 250
HPN+++LV YC+ + + L+ F RG+L N + R KG+ I + + LG
Sbjct: 85 HPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQI-LWLLLGI 143
Query: 251 AKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAP---EDGKTHVSTRVM 307
+GL +H K +RD K +NILL + L D G A E + ++ +
Sbjct: 144 CRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDW 200
Query: 308 G----TYGYAAPE-YVMTGH--LTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEW 360
T Y APE + + H + ++DV+S G VL M+ G D G+ +
Sbjct: 201 AAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA- 259
Query: 361 ARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETLKPLQ 420
+ +L S + S QL ++ DP RP + ++ L+ LQ
Sbjct: 260 --------------VQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TG VAVK L+ + K E+ L ++ H
Sbjct: 26 VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQFLI-YQILR 132
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DFGLA+ ++ V+TR Y
Sbjct: 133 GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WY 184
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 92/217 (42%), Gaps = 30/217 (13%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V ++ + TG VA+K + + D + K L E+ L + H
Sbjct: 62 IGNGAYGVV---------SSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKH 112
Query: 199 PNLVKLVGYCIEDDQRLLV--------YEFMPRGSLENHLFRKGSLPLPWSIRMKIALGA 250
N++ I+D R V Y + + H S PL
Sbjct: 113 DNII-----AIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQL 167
Query: 251 AKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTH--VSTRVMG 308
+GL ++H VI+RD K SN+L++ + K+ DFG+A+ H T +
Sbjct: 168 LRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 224
Query: 309 TYGYAAPEYVMTGH-LTSKSDVYSFGVVLLEMLTGRR 344
T Y APE +++ H T D++S G + EML R+
Sbjct: 225 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 117/290 (40%), Gaps = 49/290 (16%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 193
+R LLG+GGFG VF G T ++ + + L L EV L
Sbjct: 32 EYRLGPLLGKGGFGTVFAG---HRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALL 88
Query: 194 GNLL----HPNLVKLVGYCIEDDQRLLVYEF-MPRGSLENHLFRKGSLPLPWSIRMKIAL 248
+ HP +++L+ + + +LV E +P L +++ KG L S +
Sbjct: 89 WKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPS---RCFF 145
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYN-AKLSDFG---LAKDAPEDGKTHVST 304
G +A + + V++RD K NIL+D AKL DFG L D P T
Sbjct: 146 GQV--VAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP-------YT 196
Query: 305 RVMGTYGYAAPEYVMTGHLTS-KSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARP 363
GT Y+ PE++ + + V+S G++L +M+ G ++++ E L
Sbjct: 197 DFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAEL------ 250
Query: 364 HLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVV 413
HF S L +CL+ P +RP + E++
Sbjct: 251 ------------------HFPAHVSPDCCALIRRCLAPKPSSRPSLEEIL 282
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 81/182 (44%), Gaps = 16/182 (8%)
Query: 166 TGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGS 225
TG AVK + + + + E+ L P +V L G E + E + GS
Sbjct: 96 TGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGS 150
Query: 226 LENHLFRKGSLPLPWSIRMKIALGAA-KGLAFLHEEAEKPVIYRDFKTSNILLDADYN-A 283
L + + G LP R LG A +GL +LH + +++ D K N+LL +D + A
Sbjct: 151 LGQLIKQMGCLP---EDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRA 204
Query: 284 KLSDFGLAKDAPEDG---KTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEML 340
L DFG A DG + GT + APE VM +K D++S ++L ML
Sbjct: 205 ALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHML 264
Query: 341 TG 342
G
Sbjct: 265 NG 266
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 81/182 (44%), Gaps = 16/182 (8%)
Query: 166 TGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGS 225
TG AVK + + + + E+ L P +V L G E + E + GS
Sbjct: 98 TGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGS 152
Query: 226 LENHLFRKGSLPLPWSIRMKIALGAA-KGLAFLHEEAEKPVIYRDFKTSNILLDADYN-A 283
L + + G LP R LG A +GL +LH + +++ D K N+LL +D + A
Sbjct: 153 LGQLIKQMGCLP---EDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRA 206
Query: 284 KLSDFGLAKDAPEDG---KTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEML 340
L DFG A DG + GT + APE VM +K D++S ++L ML
Sbjct: 207 ALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHML 266
Query: 341 TG 342
G
Sbjct: 267 NG 268
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 30/210 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTL----NHDGLQGHKEWLAEVNFLGNL 196
+GEG +G V+K + G T A+K + +G+ + E++ L L
Sbjct: 10 IGEGTYGVVYKA----------QNNYGETFALKKIRLEKEDEGIPSTT--IREISILKEL 57
Query: 197 LHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMK-IALGAAKGLA 255
H N+VKL + +LV+E + + + +G L S+ K L G+A
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLE---SVTAKSFLLQLLNGIA 114
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKD--APEDGKTHVSTRVMGTYGYA 313
+ H+ + V++RD K N+L++ + K++DFGLA+ P TH T Y
Sbjct: 115 YCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYR 167
Query: 314 APEYVM-TGHLTSKSDVYSFGVVLLEMLTG 342
AP+ +M + ++ D++S G + EM+ G
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 30/210 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTL----NHDGLQGHKEWLAEVNFLGNL 196
+GEG +G V+K + G T A+K + +G+ + E++ L L
Sbjct: 10 IGEGTYGVVYKA----------QNNYGETFALKKIRLEKEDEGIPSTT--IREISILKEL 57
Query: 197 LHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMK-IALGAAKGLA 255
H N+VKL + +LV+E + + + +G L S+ K L G+A
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLE---SVTAKSFLLQLLNGIA 114
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKD--APEDGKTHVSTRVMGTYGYA 313
+ H+ + V++RD K N+L++ + K++DFGLA+ P TH T Y
Sbjct: 115 YCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYR 167
Query: 314 APEYVM-TGHLTSKSDVYSFGVVLLEMLTG 342
AP+ +M + ++ D++S G + EM+ G
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 118/302 (39%), Gaps = 43/302 (14%)
Query: 124 MFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH 183
M +D L + ++G+G F V + E G + + K + GL
Sbjct: 15 MADDDVLFEDVYELCEVIGKGAFSVVRRCINRETGQ---QFAVKIVDVAKFTSSPGLST- 70
Query: 184 KEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWS-- 241
++ E + L HP++V+L+ D +V+EFM L + ++ +S
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEA 130
Query: 242 IRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNA---KLSDFGLAKDAPEDG 298
+ + L + H+ +I+RD K N+LL + N+ KL DFG+A E G
Sbjct: 131 VASHYMRQILEALRYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESG 187
Query: 299 KTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLV 358
V+ +GT + APE V DV+ GV+L +L+G
Sbjct: 188 L--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG---------------- 229
Query: 359 EWARPHLGDKRRFYR-------LLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSE 411
P G K R + ++PR H S+ A L + L DP R + E
Sbjct: 230 --CLPFYGTKERLFEGIIKGKYKMNPRQWSHI----SESAKDLVRRMLMLDPAERITVYE 283
Query: 412 VV 413
+
Sbjct: 284 AL 285
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 30/210 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTL----NHDGLQGHKEWLAEVNFLGNL 196
+GEG +G V+K + G T A+K + +G+ + E++ L L
Sbjct: 10 IGEGTYGVVYKA----------QNNYGETFALKKIRLEKEDEGIPSTT--IREISILKEL 57
Query: 197 LHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMK-IALGAAKGLA 255
H N+VKL + +LV+E + + + +G L S+ K L G+A
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLE---SVTAKSFLLQLLNGIA 114
Query: 256 FLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKD--APEDGKTHVSTRVMGTYGYA 313
+ H+ + V++RD K N+L++ + K++DFGLA+ P TH + T Y
Sbjct: 115 YCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH----EIVTLWYR 167
Query: 314 APEYVM-TGHLTSKSDVYSFGVVLLEMLTG 342
AP+ +M + ++ D++S G + EM+ G
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 88/203 (43%), Gaps = 18/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E+G VK + K L VNF P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++ G + +HL R G P + R A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RF-YAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT Y AP ++
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEYLAPAIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTG 342
+ D ++ GV++ EM G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 99/235 (42%), Gaps = 50/235 (21%)
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSL-----ENHLFRKGSLPLPWSIR 243
E+ L L HP ++K+ + + + +V E M G L N ++ + L + +
Sbjct: 71 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQ 128
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILL---DADYNAKLSDFGLAKDAPEDGKT 300
M +A+ +LHE +I+RD K N+LL + D K++DFG +K G+T
Sbjct: 129 MLLAV------QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GET 176
Query: 301 HVSTRVMGTYGYAAPEYVM---TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL 357
+ + GT Y APE ++ T D +S GV+L L+G
Sbjct: 177 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG--------------- 221
Query: 358 VEWARPHLGDKRRFYRLLDPRLEGHFSI------KGSQKATQLAAQCLSRDPKAR 406
P + R L D G ++ + S+KA L + L DPKAR
Sbjct: 222 ----YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 272
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 119/302 (39%), Gaps = 43/302 (14%)
Query: 125 FNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK 184
F + + R + +G GG VF+ E+ +K V ++ ++ L ++
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYR 74
Query: 185 EWLAEVNFLGNLLHPN-LVKLVGYCIEDDQRLLVYEFMPRGSLE-NHLFRKGSLPLPWSI 242
+A +N L H + +++L Y I D +Y M G+++ N +K PW
Sbjct: 75 NEIAYLNKLQQ--HSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWE- 128
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHV 302
R + + +H+ +++ D K +N L+ D KL DFG+A D V
Sbjct: 129 RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVV 184
Query: 303 STRVMGTYGYAAPEYV-----------MTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRP 351
+GT Y PE + ++ KSDV+S G +L M G+ +
Sbjct: 185 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-- 242
Query: 352 NGEHNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSE 411
+ + + ++DP E F + + CL RDPK R + E
Sbjct: 243 -------------INQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 289
Query: 412 VV 413
++
Sbjct: 290 LL 291
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 39/218 (17%)
Query: 141 LGEGGFG--CVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---LAEVNFLGN 195
+G+G FG C+ V++N T + A+K +N E E+ +
Sbjct: 23 IGKGSFGKVCI----VQKNDTKKM-------YAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 196 LLHPNLVKLVGYCIEDDQRL-LVYEFMPRGSLENHL-----FRKGSLPLPWSIRMKIALG 249
L HP LV L Y +D++ + +V + + G L HL F++ ++ L + + +AL
Sbjct: 72 LEHPFLVNL-WYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL-FICELVMALD 129
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+ + +I+RD K NILLD + ++DF +A P + + T + GT
Sbjct: 130 YLQN---------QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQI---TTMAGT 177
Query: 310 YGYAAPEYVMT---GHLTSKSDVYSFGVVLLEMLTGRR 344
Y APE + + D +S GV E+L GRR
Sbjct: 178 KPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 99/235 (42%), Gaps = 50/235 (21%)
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSL-----ENHLFRKGSLPLPWSIR 243
E+ L L HP ++K+ + + + +V E M G L N ++ + L + +
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQ 122
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILL---DADYNAKLSDFGLAKDAPEDGKT 300
M +A+ +LHE +I+RD K N+LL + D K++DFG +K G+T
Sbjct: 123 MLLAV------QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GET 170
Query: 301 HVSTRVMGTYGYAAPEYVM---TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL 357
+ + GT Y APE ++ T D +S GV+L L+G
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG--------------- 215
Query: 358 VEWARPHLGDKRRFYRLLDPRLEGHFSI------KGSQKATQLAAQCLSRDPKAR 406
P + R L D G ++ + S+KA L + L DPKAR
Sbjct: 216 ----YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 266
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 101/243 (41%), Gaps = 50/243 (20%)
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSL-----ENHLFRKGSLPLPWSI 242
E+ L L HP ++K+ + + + +V E M G L N ++ + L +
Sbjct: 189 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YFY 246
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILL---DADYNAKLSDFGLAKDAPEDGK 299
+M +A+ +LHE +I+RD K N+LL + D K++DFG +K G+
Sbjct: 247 QMLLAV------QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GE 294
Query: 300 THVSTRVMGTYGYAAPEYVM---TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHN 356
T + + GT Y APE ++ T D +S GV+L L+G
Sbjct: 295 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG-------------- 340
Query: 357 LVEWARPHLGDKRRFYRLLDPRLEGHFSI------KGSQKATQLAAQCLSRDPKARPRMS 410
P + R L D G ++ + S+KA L + L DPKAR
Sbjct: 341 -----YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTE 395
Query: 411 EVV 413
E +
Sbjct: 396 EAL 398
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 101/242 (41%), Gaps = 50/242 (20%)
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSL-----ENHLFRKGSLPLPWSIR 243
E+ L L HP ++K+ + + + +V E M G L N ++ + L + +
Sbjct: 64 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQ 121
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILL---DADYNAKLSDFGLAKDAPEDGKT 300
M +A+ +LHE +I+RD K N+LL + D K++DFG +K G+T
Sbjct: 122 MLLAV------QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GET 169
Query: 301 HVSTRVMGTYGYAAPEYVM---TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL 357
+ + GT Y APE ++ T D +S GV+L L+G
Sbjct: 170 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG--------------- 214
Query: 358 VEWARPHLGDKRRFYRLLDPRLEGHFSI------KGSQKATQLAAQCLSRDPKARPRMSE 411
P + R L D G ++ + S+KA L + L DPKAR E
Sbjct: 215 ----YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEE 270
Query: 412 VV 413
+
Sbjct: 271 AL 272
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 99/235 (42%), Gaps = 50/235 (21%)
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSL-----ENHLFRKGSLPLPWSIR 243
E+ L L HP ++K+ + + + +V E M G L N ++ + L + +
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQ 122
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILL---DADYNAKLSDFGLAKDAPEDGKT 300
M +A+ +LHE +I+RD K N+LL + D K++DFG +K G+T
Sbjct: 123 MLLAV------QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GET 170
Query: 301 HVSTRVMGTYGYAAPEYVM---TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL 357
+ + GT Y APE ++ T D +S GV+L L+G
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG--------------- 215
Query: 358 VEWARPHLGDKRRFYRLLDPRLEGHFSI------KGSQKATQLAAQCLSRDPKAR 406
P + R L D G ++ + S+KA L + L DPKAR
Sbjct: 216 ----YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 266
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 99/235 (42%), Gaps = 50/235 (21%)
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSL-----ENHLFRKGSLPLPWSIR 243
E+ L L HP ++K+ + + + +V E M G L N ++ + L + +
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQ 122
Query: 244 MKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILL---DADYNAKLSDFGLAKDAPEDGKT 300
M +A+ +LHE +I+RD K N+LL + D K++DFG +K G+T
Sbjct: 123 MLLAV------QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GET 170
Query: 301 HVSTRVMGTYGYAAPEYVM---TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL 357
+ + GT Y APE ++ T D +S GV+L L+G
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG--------------- 215
Query: 358 VEWARPHLGDKRRFYRLLDPRLEGHFSI------KGSQKATQLAAQCLSRDPKAR 406
P + R L D G ++ + S+KA L + L DPKAR
Sbjct: 216 ----YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 266
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 115/286 (40%), Gaps = 43/286 (15%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
+G GG VF+ E+ +K V ++ ++ L ++ +A +N L H +
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKLQQ--HSD 116
Query: 201 -LVKLVGYCIEDDQRLLVYEFMPRGSLE-NHLFRKGSLPLPWSIRMKIALGAAKGLAFLH 258
+++L Y I D +Y M G+++ N +K PW R + + +H
Sbjct: 117 KIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIH 172
Query: 259 EEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYV 318
+ +++ D K +N L+ D KL DFG+A D + V +GT Y PE +
Sbjct: 173 QHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 228
Query: 319 -----------MTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
++ KSDV+S G +L M G+ + +
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI---------------INQ 273
Query: 368 KRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVV 413
+ + ++DP E F + + CL RDPK R + E++
Sbjct: 274 ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 115/286 (40%), Gaps = 43/286 (15%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
+G GG VF+ E+ +K V ++ ++ L ++ +A +N L H +
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKLQQ--HSD 72
Query: 201 -LVKLVGYCIEDDQRLLVYEFMPRGSLE-NHLFRKGSLPLPWSIRMKIALGAAKGLAFLH 258
+++L Y I D +Y M G+++ N +K PW R + + +H
Sbjct: 73 KIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIH 128
Query: 259 EEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYV 318
+ +++ D K +N L+ D KL DFG+A D + V +GT Y PE +
Sbjct: 129 QHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 184
Query: 319 -----------MTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
++ KSDV+S G +L M G+ + +
Sbjct: 185 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ---------------IINQ 229
Query: 368 KRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVV 413
+ + ++DP E F + + CL RDPK R + E++
Sbjct: 230 ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 275
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 101/243 (41%), Gaps = 50/243 (20%)
Query: 188 AEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSL-----ENHLFRKGSLPLPWSI 242
E+ L L HP ++K+ + + + +V E M G L N ++ + L +
Sbjct: 203 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YFY 260
Query: 243 RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILL---DADYNAKLSDFGLAKDAPEDGK 299
+M +A+ +LHE +I+RD K N+LL + D K++DFG +K G+
Sbjct: 261 QMLLAV------QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GE 308
Query: 300 THVSTRVMGTYGYAAPEYVM---TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHN 356
T + + GT Y APE ++ T D +S GV+L L+G
Sbjct: 309 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG-------------- 354
Query: 357 LVEWARPHLGDKRRFYRLLDPRLEGHFSI------KGSQKATQLAAQCLSRDPKARPRMS 410
P + R L D G ++ + S+KA L + L DPKAR
Sbjct: 355 -----YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTE 409
Query: 411 EVV 413
E +
Sbjct: 410 EAL 412
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 92/212 (43%), Gaps = 27/212 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK------EWLAEVNFLG 194
LG G F V K + TGL A K + + + E EV+ L
Sbjct: 20 LGSGQFAIVKKCR---------EKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILR 70
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGL 254
+LHPN++ L +L+ E + G L + L +K SL + G+
Sbjct: 71 QVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEA--TSFIKQILDGV 128
Query: 255 AFLHEEAEKPVIYRDFKTSNI-LLDADY---NAKLSDFGLAKDAPEDGKTHVSTRVMGTY 310
+LH K + + D K NI LLD + + KL DFGLA + EDG + GT
Sbjct: 129 NYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGVEF--KNIFGTP 182
Query: 311 GYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
+ APE V L ++D++S GV+ +L+G
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 24/211 (11%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
+LG+G +G V+ G N + +A+K + + + E+ +L H
Sbjct: 29 VLGKGTYGIVYAGRDLSNQ---------VRIAIKEIPERDSRYSQPLHEEIALHKHLKHK 79
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK---GLAF 256
N+V+ +G E+ + E +P GSL + L R PL + I + GL +
Sbjct: 80 NIVQYLGSFSENGFIKIFMEQVPGGSL-SALLRSKWGPLKDN-EQTIGFYTKQILEGLKY 137
Query: 257 LHEEAEKPVIYRDFKTSNILLDADYNA--KLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
LH+ +++RD K N+L++ Y+ K+SDFG +K G + GT Y A
Sbjct: 138 LHDNQ---IVHRDIKGDNVLINT-YSGVLKISDFGTSKRLA--GINPCTETFTGTLQYMA 191
Query: 315 PEYVMTG--HLTSKSDVYSFGVVLLEMLTGR 343
PE + G +D++S G ++EM TG+
Sbjct: 192 PEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 89/215 (41%), Gaps = 38/215 (17%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
+G G F V+KG ++ T V + + L Q KE E L L HPN
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEV---AWCELQDRKLTKSERQRFKE---EAEXLKGLQHPN 86
Query: 201 LVKLVGY---------CIEDDQRLLVYEFMPRGSLENHLFR----KGSLPLPWSIRMKIA 247
+V+ CI +LV E G+L+ +L R K + W ++
Sbjct: 87 IVRFYDSWESTVKGKKCI-----VLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI--- 138
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADY-NAKLSDFGLAKDAPEDGKTHVSTRV 306
KGL FLH P+I+RD K NI + + K+ D GLA + + V
Sbjct: 139 ---LKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK----RASFAKAV 190
Query: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
+GT + APE + S DVY+FG LE T
Sbjct: 191 IGTPEFXAPEXYEEKYDES-VDVYAFGXCXLEXAT 224
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 115/286 (40%), Gaps = 43/286 (15%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
+G GG VF+ E+ +K V ++ ++ L ++ +A +N L H +
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKLQQ--HSD 116
Query: 201 -LVKLVGYCIEDDQRLLVYEFMPRGSLE-NHLFRKGSLPLPWSIRMKIALGAAKGLAFLH 258
+++L Y I D +Y M G+++ N +K PW R + + +H
Sbjct: 117 KIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIH 172
Query: 259 EEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYV 318
+ +++ D K +N L+ D KL DFG+A D + V +GT Y PE +
Sbjct: 173 QHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 228
Query: 319 -----------MTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
++ KSDV+S G +L M G+ + +
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI---------------INQ 273
Query: 368 KRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVV 413
+ + ++DP E F + + CL RDPK R + E++
Sbjct: 274 ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 115/286 (40%), Gaps = 43/286 (15%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
+G GG VF+ E+ +K V ++ ++ L ++ +A +N L H +
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKLQQ--HSD 69
Query: 201 -LVKLVGYCIEDDQRLLVYEFMPRGSLE-NHLFRKGSLPLPWSIRMKIALGAAKGLAFLH 258
+++L Y I D +Y M G+++ N +K PW R + + +H
Sbjct: 70 KIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIH 125
Query: 259 EEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYV 318
+ +++ D K +N L+ D KL DFG+A D + V +GT Y PE +
Sbjct: 126 QHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 181
Query: 319 -----------MTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
++ KSDV+S G +L M G+ + +
Sbjct: 182 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI---------------INQ 226
Query: 368 KRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVV 413
+ + ++DP E F + + CL RDPK R + E++
Sbjct: 227 ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 272
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 30/212 (14%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGNLLH 198
+G G +G V A TG VAVK L+ + K E+ L ++ H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 199 PNLVKLVGYCI------EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
N++ L+ E + LV M G+ N++ + L ++ I +
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDD-HVQFLI-YQILR 136
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
GL ++H +I+RD K SN+ ++ D K+ DF LA+ ++ +V+TR Y
Sbjct: 137 GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR-----WY 188
Query: 313 AAPEYVMTG-HLTSKSDVYSFGVVLLEMLTGR 343
APE ++ H D++S G ++ E+LTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V +E+G VK + K L VNF P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 201 LVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHE 259
LVKL + +D+ L +V E++ G + +HL R G P + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA--RFYAAQIVLTFEYLHS 159
Query: 260 EAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM 319
+IYRD K N+L+D +++DFG AK G+T + GT APE ++
Sbjct: 160 ---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRT---WXLCGTPEALAPEIIL 211
Query: 320 TGHLTSKSDVYSFGVVLLEMLTG 342
+ D ++ GV++ EM G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 115/286 (40%), Gaps = 43/286 (15%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
+G GG VF+ E+ +K V ++ ++ L ++ +A +N L H +
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKLQQ--HSD 68
Query: 201 -LVKLVGYCIEDDQRLLVYEFMPRGSLE-NHLFRKGSLPLPWSIRMKIALGAAKGLAFLH 258
+++L Y I D +Y M G+++ N +K PW R + + +H
Sbjct: 69 KIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIH 124
Query: 259 EEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYV 318
+ +++ D K +N L+ D KL DFG+A D + V +GT Y PE +
Sbjct: 125 QHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 180
Query: 319 -----------MTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
++ KSDV+S G +L M G+ + +
Sbjct: 181 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI---------------INQ 225
Query: 368 KRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVV 413
+ + ++DP E F + + CL RDPK R + E++
Sbjct: 226 ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 271
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 119/296 (40%), Gaps = 55/296 (18%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG+G F +FKG E G T V +K L+ + + + + L H +
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHET--EVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFR-KGSLPLPWSIRMKIALGAAKGLAFLHE 259
LV G C+ D+ +LV EF+ GSL+ +L + K + + W + + L AA +H
Sbjct: 74 LVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAA-----MHF 128
Query: 260 EAEKPVIYRDFKTSNILLDADYN--------AKLSDFGLAKDA-PEDGKTHVSTRVMGTY 310
E +I+ + NILL + + KLSD G++ P+D + R+
Sbjct: 129 LEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI---LQERI---- 181
Query: 311 GYAAPEYVMT-GHLTSKSDVYSFGVVLLEMLTG----RRSMDKNRPNGEHNLVEWARPHL 365
+ PE + +L +D +SFG L E+ +G ++D R
Sbjct: 182 PWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR--------------- 226
Query: 366 GDKRRFYRLLDPRLEGHFSIKGSQKA--TQLAAQCLSRDPKARPRMSEVVETLKPL 419
K +FY E + + A L C+ +P RP ++ L L
Sbjct: 227 --KLQFY-------EDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 103/262 (39%), Gaps = 29/262 (11%)
Query: 165 GTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDD--QRLLVYEFMP 222
G + V V + + +++ E L HPN++ ++G C L+ + P
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXP 92
Query: 223 RGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRD-FKTSNILLDADY 281
GSL N L + + S +K AL A+G AFLH +P+I R + ++ +D D
Sbjct: 93 YGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLH--TLEPLIPRHALNSRSVXIDEDX 150
Query: 282 NAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLT 341
A++S + G+ + V PE +D +SF V+L E++T
Sbjct: 151 TARISXADVKFSFQSPGRXYAPAWVAPEALQKKPEDTN----RRSADXWSFAVLLWELVT 206
Query: 342 GRRSMD--KNRPNGEHNLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCL 399
N G +E RP + P + H S +L C
Sbjct: 207 REVPFADLSNXEIGXKVALEGLRP----------TIPPGISPHVS--------KLXKICX 248
Query: 400 SRDPKARPRMSEVVETLKPLQN 421
+ DP RP+ +V L+ Q+
Sbjct: 249 NEDPAKRPKFDXIVPILEKXQD 270
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A G + + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
APE ++ D++S GV++ EM+ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A G + + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
APE ++ D++S GV++ EM+ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V + V+ TG K +N E++ + L HP
Sbjct: 59 LGSGAFGVVHRC---------VEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPK 109
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
L+ L + + +L+ EF+ G L + + + + + + A +GL +HE
Sbjct: 110 LINLHDAFEDKYEMVLILEFLSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEH 168
Query: 261 AEKPVIYRDFKTSNILLDAD--YNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYV 318
+ +++ D K NI+ + + K+ DFGLA D V+T T +AAPE V
Sbjct: 169 S---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPEIV 222
Query: 319 MTGHLTSKSDVYSFGVVLLEMLTG 342
+ +D+++ GV+ +L+G
Sbjct: 223 DREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 24/211 (11%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
+LG+G +G V+ G N + +A+K + + + E+ +L H
Sbjct: 15 VLGKGTYGIVYAGRDLSNQ---------VRIAIKEIPERDSRYSQPLHEEIALHKHLKHK 65
Query: 200 NLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK---GLAF 256
N+V+ +G E+ + E +P GSL + L R PL + I + GL +
Sbjct: 66 NIVQYLGSFSENGFIKIFMEQVPGGSL-SALLRSKWGPLKDN-EQTIGFYTKQILEGLKY 123
Query: 257 LHEEAEKPVIYRDFKTSNILLDADYNA--KLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
LH+ +++RD K N+L++ Y+ K+SDFG +K G + GT Y A
Sbjct: 124 LHDNQ---IVHRDIKGDNVLINT-YSGVLKISDFGTSKRLA--GINPCTETFTGTLQYMA 177
Query: 315 PEYVMTG--HLTSKSDVYSFGVVLLEMLTGR 343
PE + G +D++S G ++EM TG+
Sbjct: 178 PEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 97/222 (43%), Gaps = 29/222 (13%)
Query: 198 HPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFL 257
HPN+VKL + LV E + G L + +K + + L +A ++ +
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSA--VSHM 122
Query: 258 HEEAEKPVIYRDFKTSNILL---DADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
H+ V++RD K N+L + + K+ DFG A+ P D + + T T YAA
Sbjct: 123 HDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP-LKTPCF-TLHYAA 177
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFYRL 374
PE + D++S GV+L ML+G+ + + +L + + K +
Sbjct: 178 PELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSH----DRSLTCTSAVEIMKKIK---- 229
Query: 375 LDPRLEGHFSIKG------SQKATQLAAQCLSRDPKARPRMS 410
+G FS +G SQ+A L L+ DP R +MS
Sbjct: 230 -----KGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMS 266
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 86/204 (42%), Gaps = 18/204 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V + V E T G A K + + E+ + L HP
Sbjct: 59 LGTGAFGVVHR--VTERAT-------GNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 109
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV L +D++ +++YEFM G L + + + + ++ KGL +HE
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN-KMSEDEAVEYMRQVCKGLCHMHEN 168
Query: 261 AEKPVIYRDFKTSNILLDADYN--AKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYV 318
++ D K NI+ + KL DFGL V+T GT +AAPE
Sbjct: 169 N---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVA 222
Query: 319 MTGHLTSKSDVYSFGVVLLEMLTG 342
+ +D++S GV+ +L+G
Sbjct: 223 EGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 98/227 (43%), Gaps = 29/227 (12%)
Query: 128 LKLATRNFRPESL------LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQ 181
+ L T N +S+ LG+G F V + VK G A K +N L
Sbjct: 11 VDLGTENLYFQSMYQLFEELGKGAFSVVRRC---------VKVLAGQEYAAKIINTKKLS 61
Query: 182 G--HKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSL-ENHLFRKGSLPL 238
H++ E L HPN+V+L E+ L+++ + G L E+ + R+
Sbjct: 62 ARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEA 121
Query: 239 PWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYN---AKLSDFGLAKDAP 295
S ++ L A LH + V++RD K N+LL + KL+DFGLA +
Sbjct: 122 DASHCIQQILEAV-----LHCH-QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEV- 174
Query: 296 EDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
+G+ GT GY +PE + D+++ GV+L +L G
Sbjct: 175 -EGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 13/109 (11%)
Query: 242 IRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGL--AKDAPEDGK 299
+ + I + A+ + FLH K +++RD K SNI D K+ DFGL A D E+ +
Sbjct: 165 VCLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 221
Query: 300 THVSTR--------VMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEML 340
T ++ +GT Y +PE + + + K D++S G++L E+L
Sbjct: 222 TVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 132/313 (42%), Gaps = 50/313 (15%)
Query: 141 LGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLL-- 197
+G+G +G V+ G W G VAVK W E +L
Sbjct: 45 IGKGRYGEVWMGKW------------RGEKVAVKVF---FTTEEASWFRETEIYQTVLMR 89
Query: 198 HPNLVKLVGYCIEDD----QRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKG 253
H N++ + I+ Q L+ ++ GSL ++L S L +K+A + G
Sbjct: 90 HENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSG 146
Query: 254 LAFLHEEA----EKPVI-YRDFKTSNILLDADYNAKLSDFGLA-KDAPEDGKTHV--STR 305
L LH E KP I +RD K+ NIL+ + ++D GLA K + + + +TR
Sbjct: 147 LCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTR 206
Query: 306 VMGTYGYAAPEYVMTG----HLTS--KSDVYSFGVVLLEMLTGRRSMD----KNRPNGEH 355
V GT Y PE + H S +D+YSFG++L E+ RR + + H
Sbjct: 207 V-GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCVSGGIVEEYQLPYH 263
Query: 356 NLVEWARPHLGDKRRFYRL--LDPRLEGHFSIKGS-QKATQLAAQCLSRDPKARPRMSEV 412
+LV + P D R + L P +S ++ +L +C + +P +R V
Sbjct: 264 DLVP-SDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRV 322
Query: 413 VETLKPLQNLKDM 425
+TL + +D+
Sbjct: 323 KKTLAKMSESQDI 335
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 92/233 (39%), Gaps = 40/233 (17%)
Query: 134 NFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 193
+F ++LG+G FG V K N A+K + H + L+EV L
Sbjct: 7 DFEEIAVLGQGAFGQVVKA---RNAL------DSRYYAIKKIRHTE-EKLSTILSEVXLL 56
Query: 194 GNLLHPNLVKLVGYCIE-------------DDQRLLVYEFMPRGSLENHLFRKGSLPLPW 240
+L H +V+ +E + E+ +L + L +L
Sbjct: 57 ASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYD-LIHSENLNQQR 115
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPED--- 297
++ + L+++H + +I+R+ K NI +D N K+ DFGLAK+
Sbjct: 116 DEYWRLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 298 ---------GKTHVSTRVMGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEML 340
G + T +GT Y A E + TGH K D YS G++ E +
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 76/182 (41%), Gaps = 29/182 (15%)
Query: 202 VKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLP------WSIRMKIALGAAKGL 254
+ + Y +DD L LV ++ G L L K LP + M IA+ + L
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLT-LLSKFEDRLPEEMARFYLAEMVIAIDSVHQL 194
Query: 255 AFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
++H RD K NIL+D + + +L+DFG EDG S V GT Y +
Sbjct: 195 HYVH---------RDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV-GTPDYIS 244
Query: 315 PEYVMT-----GHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKR 369
PE + G + D +S GV + EML G P +LVE + K
Sbjct: 245 PEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE------TPFYAESLVETYGKIMNHKE 298
Query: 370 RF 371
RF
Sbjct: 299 RF 300
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 86/204 (42%), Gaps = 18/204 (8%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG G FG V + V E T G A K + + E+ + L HP
Sbjct: 165 LGTGAFGVVHR--VTERAT-------GNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 215
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
LV L +D++ +++YEFM G L + + + + ++ KGL +HE
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN-KMSEDEAVEYMRQVCKGLCHMHEN 274
Query: 261 AEKPVIYRDFKTSNILLDADYN--AKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYV 318
++ D K NI+ + KL DFGL V+T GT +AAPE
Sbjct: 275 N---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVA 328
Query: 319 MTGHLTSKSDVYSFGVVLLEMLTG 342
+ +D++S GV+ +L+G
Sbjct: 329 EGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 114/286 (39%), Gaps = 43/286 (15%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
+G GG VF+ E+ +K V ++ ++ L ++ +A +N L H +
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKLQQ--HSD 116
Query: 201 -LVKLVGYCIEDDQRLLVYEFMPRGSLE-NHLFRKGSLPLPWSIRMKIALGAAKGLAFLH 258
+++L Y I D +Y M G+++ N +K PW R + + +H
Sbjct: 117 KIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIH 172
Query: 259 EEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYV 318
+ +++ D K +N L+ D KL DFG+A D + V +G Y PE +
Sbjct: 173 QHG---IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAI 228
Query: 319 -----------MTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGD 367
++ KSDV+S G +L M G+ + +
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI---------------INQ 273
Query: 368 KRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVV 413
+ + ++DP E F + + CL RDPK R + E++
Sbjct: 274 ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A G + + T + T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 192
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
APE ++ D++S G ++ EM+ G
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A G + + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
APE ++ D++S G ++ EM+ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 19/178 (10%)
Query: 123 FMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG 182
F+ ++L R +L EGGF V++ G+G A+K L + +
Sbjct: 18 FVGQTVELGELRLRVRRVLAEGGFAFVYEAQ---------DVGSGREYALKRLLSNEEEK 68
Query: 183 HKEWLAEVNFLGNLL-HPNLVKLVGYCI----EDDQ---RLLVYEFMPRGSLENHLFRKG 234
++ + EV F+ L HPN+V+ E D L+ + +G L L +
Sbjct: 69 NRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKME 128
Query: 235 SL-PLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLA 291
S PL +KI + + +H + + P+I+RD K N+LL KL DFG A
Sbjct: 129 SRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A G + + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
APE ++ D++S G ++ EM+ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 116/289 (40%), Gaps = 51/289 (17%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 194
LG G F V K + GTG A K + L + ++ EVN L
Sbjct: 13 LGSGQFAIVRKCR---------QKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 63
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGL 254
+ HPN++ L +L+ E + G L + L K SL + + + G+
Sbjct: 64 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI--LDGV 121
Query: 255 AFLHEEAEKPVIYRDFKTSNILLDADYNA-----KLSDFGLAKDAPEDGKTHVSTRVMGT 309
+LH K + + D K NI+L D N KL DFG+A E G + GT
Sbjct: 122 HYLH---SKRIAHFDLKPENIML-LDKNVPNPRIKLIDFGIAHKI-EAGNEF--KNIFGT 174
Query: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKR 369
+ APE V L ++D++S GV+ +L+G A P LG+ +
Sbjct: 175 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLGETK 216
Query: 370 RF----YRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
+ ++ + + S+ A + L +DPK R +++ +E
Sbjct: 217 QETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A G + + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
APE ++ D++S G ++ EM+ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A G + + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
APE ++ D++S G ++ EM+ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 116/289 (40%), Gaps = 51/289 (17%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 194
LG G F V K + GTG A K + L + ++ EVN L
Sbjct: 20 LGSGQFAIVRKCR---------QKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 70
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGL 254
+ HPN++ L +L+ E + G L + L K SL + + + G+
Sbjct: 71 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI--LDGV 128
Query: 255 AFLHEEAEKPVIYRDFKTSNILLDADYNA-----KLSDFGLAKDAPEDGKTHVSTRVMGT 309
+LH K + + D K NI+L D N KL DFG+A E G + GT
Sbjct: 129 HYLH---SKRIAHFDLKPENIML-LDKNVPNPRIKLIDFGIAHKI-EAGNEF--KNIFGT 181
Query: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKR 369
+ APE V L ++D++S GV+ +L+G A P LG+ +
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLGETK 223
Query: 370 RF----YRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
+ ++ + + S+ A + L +DPK R +++ +E
Sbjct: 224 QETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLE 272
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A G + + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
APE ++ D++S G ++ EM+ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A G + + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPEVVTRYY 191
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
APE ++ D++S G ++ EM+ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 116/289 (40%), Gaps = 51/289 (17%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 194
LG G F V K + GTG A K + L + ++ EVN L
Sbjct: 34 LGSGQFAIVRKCR---------QKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILR 84
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGL 254
+ HPN++ L +L+ E + G L + L K SL + + + G+
Sbjct: 85 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI--LDGV 142
Query: 255 AFLHEEAEKPVIYRDFKTSNILLDADYNA-----KLSDFGLAKDAPEDGKTHVSTRVMGT 309
+LH K + + D K NI+L D N KL DFG+A E G + GT
Sbjct: 143 HYLH---SKRIAHFDLKPENIML-LDKNVPNPRIKLIDFGIAHKI-EAGNEF--KNIFGT 195
Query: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKR 369
+ APE V L ++D++S GV+ +L+G A P LG+ +
Sbjct: 196 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLGETK 237
Query: 370 RF----YRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
+ ++ + + S+ A + L +DPK R +++ +E
Sbjct: 238 QETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLE 286
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A G + + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
APE ++ D++S G ++ EM+ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 120/296 (40%), Gaps = 55/296 (18%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG+G F +FKG E G T V +K L+ + + + + L H +
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHET--EVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 201 LVKLVGYCIEDDQRLLVYEFMPRGSLENHLFR-KGSLPLPWSIRMKIALGAAKGLAFLHE 259
LV G C D+ +LV EF+ GSL+ +L + K + + W ++++A A + FL E
Sbjct: 74 LVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWAMHFLEE 131
Query: 260 EAEKPVIYRDFKTSNILLDADYN--------AKLSDFGLAKDA-PEDGKTHVSTRVMGTY 310
+I+ + NILL + + KLSD G++ P+D + R+
Sbjct: 132 NT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI---LQERI---- 181
Query: 311 GYAAPEYVMT-GHLTSKSDVYSFGVVLLEMLTG----RRSMDKNRPNGEHNLVEWARPHL 365
+ PE + +L +D +SFG L E+ +G ++D R
Sbjct: 182 PWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR--------------- 226
Query: 366 GDKRRFYRLLDPRLEGHFSIKGSQKA--TQLAAQCLSRDPKARPRMSEVVETLKPL 419
K +FY E + + A L C+ +P RP ++ L L
Sbjct: 227 --KLQFY-------EDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 32/187 (17%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A G + + T + T Y
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 229
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLT------GRRSMDK-NR---------PNGEHN 356
APE ++ D++S G ++ EM+ GR +D+ N+ P
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 289
Query: 357 LVEWARPHLGDKRRFYRLLDPRL---------EGHFSIKGSQKATQLAAQCLSRDPKARP 407
L R ++ ++ ++ L P+L H +K SQ A L ++ L DP R
Sbjct: 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ-ARDLLSKMLVIDPAKRI 348
Query: 408 RMSEVVE 414
+ + ++
Sbjct: 349 SVDDALQ 355
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A G + + + T Y
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMVPFVVTRYY 193
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
APE ++ D++S G ++ EM+ G
Sbjct: 194 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 32/187 (17%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A G + + T + T Y
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 229
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLT------GRRSMDK-NR---------PNGEHN 356
APE ++ D++S G ++ EM+ GR +D+ N+ P
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 289
Query: 357 LVEWARPHLGDKRRFYRLLDPRL---------EGHFSIKGSQKATQLAAQCLSRDPKARP 407
L R ++ ++ ++ L P+L H +K SQ A L ++ L DP R
Sbjct: 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ-ARDLLSKMLVIDPAKRI 348
Query: 408 RMSEVVE 414
+ + ++
Sbjct: 349 SVDDALQ 355
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 32/187 (17%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A G + + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLT------GRRSMDK-NR---------PNGEHN 356
APE ++ D++S G ++ EM+ GR +D+ N+ P
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 357 LVEWARPHLGDKRRFYRLLDPRL---------EGHFSIKGSQKATQLAAQCLSRDPKARP 407
L R ++ ++ ++ L P+L H +K SQ A L ++ L DP R
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ-ARDLLSKMLVIDPAKRI 310
Query: 408 RMSEVVE 414
+ + ++
Sbjct: 311 SVDDALQ 317
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 32/187 (17%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A G + + T + T Y
Sbjct: 137 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 190
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLT------GRRSMDK-NR---------PNGEHN 356
APE ++ D++S G ++ EM+ GR +D+ N+ P
Sbjct: 191 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 250
Query: 357 LVEWARPHLGDKRRFYRLLDPRL---------EGHFSIKGSQKATQLAAQCLSRDPKARP 407
L R ++ ++ ++ L P+L H +K SQ A L ++ L DP R
Sbjct: 251 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ-ARDLLSKMLVIDPAKRI 309
Query: 408 RMSEVVE 414
+ + ++
Sbjct: 310 SVDDALQ 316
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 32/187 (17%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A G + + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLT------GRRSMDK-NR---------PNGEHN 356
APE ++ D++S G ++ EM+ GR +D+ N+ P
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 357 LVEWARPHLGDKRRFYRLLDPRL---------EGHFSIKGSQKATQLAAQCLSRDPKARP 407
L R ++ ++ ++ L P+L H +K SQ A L ++ L DP R
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ-ARDLLSKMLVIDPAKRI 310
Query: 408 RMSEVVE 414
+ + ++
Sbjct: 311 SVDDALQ 317
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 32/187 (17%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A G + + T + T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 192
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLT------GRRSMDK-NR---------PNGEHN 356
APE ++ D++S G ++ EM+ GR +D+ N+ P
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 252
Query: 357 LVEWARPHLGDKRRFYRLLDPRL---------EGHFSIKGSQKATQLAAQCLSRDPKARP 407
L R ++ ++ ++ L P+L H +K SQ A L ++ L DP R
Sbjct: 253 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ-ARDLLSKMLVIDPAKRI 311
Query: 408 RMSEVVE 414
+ + ++
Sbjct: 312 SVDDALQ 318
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 32/187 (17%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A G + + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLT------GRRSMDK-NR---------PNGEHN 356
APE ++ D++S G ++ EM+ GR +D+ N+ P
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 357 LVEWARPHLGDKRRFYRLLDPRL---------EGHFSIKGSQKATQLAAQCLSRDPKARP 407
L R ++ ++ ++ L P+L H +K SQ A L ++ L DP R
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ-ARDLLSKMLVIDPAKRI 310
Query: 408 RMSEVVE 414
+ + ++
Sbjct: 311 SVDDALQ 317
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 32/187 (17%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A G + + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLT------GRRSMDK-NR---------PNGEHN 356
APE ++ D++S G ++ EM+ GR +D+ N+ P
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 357 LVEWARPHLGDKRRFYRLLDPRL---------EGHFSIKGSQKATQLAAQCLSRDPKARP 407
L R ++ ++ ++ L P+L H +K SQ A L ++ L DP R
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ-ARDLLSKMLVIDPAKRI 310
Query: 408 RMSEVVE 414
+ + ++
Sbjct: 311 SVDDALQ 317
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 32/187 (17%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A G + + T + T Y
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYY 184
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLT------GRRSMDK-NR---------PNGEHN 356
APE ++ D++S G ++ EM+ GR +D+ N+ P
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 244
Query: 357 LVEWARPHLGDKRRFYRLLDPRL---------EGHFSIKGSQKATQLAAQCLSRDPKARP 407
L R ++ ++ ++ L P+L H +K SQ A L ++ L DP R
Sbjct: 245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ-ARDLLSKMLVIDPAKRI 303
Query: 408 RMSEVVE 414
+ + ++
Sbjct: 304 SVDDALQ 310
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 32/187 (17%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A G + + T + T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 192
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLT------GRRSMDK-NR---------PNGEHN 356
APE ++ D++S G ++ EM+ GR +D+ N+ P
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 252
Query: 357 LVEWARPHLGDKRRFYRLLDPRL---------EGHFSIKGSQKATQLAAQCLSRDPKARP 407
L R ++ ++ ++ L P+L H +K SQ A L ++ L DP R
Sbjct: 253 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ-ARDLLSKMLVIDPAKRI 311
Query: 408 RMSEVVE 414
+ + ++
Sbjct: 312 SVDDALQ 318
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 13/160 (8%)
Query: 189 EVNFLGNLLHPNLVKLVGYCIE--DDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
E+ L L HPN+VKLV + +D +V+E + +G + K PL
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK---PLSEDQARFY 142
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRV 306
KG+ +LH + +I+RD K SN+L+ D + K++DFG++ + G + +
Sbjct: 143 FQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEF--KGSDALLSNT 197
Query: 307 MGTYGYAAPEYVMTGH--LTSKS-DVYSFGVVLLEMLTGR 343
+GT + APE + + K+ DV++ GV L + G+
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 32/187 (17%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A G + + T + T Y
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 184
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLT------GRRSMDK-NR---------PNGEHN 356
APE ++ D++S G ++ EM+ GR +D+ N+ P
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 244
Query: 357 LVEWARPHLGDKRRFYRLLDPRL---------EGHFSIKGSQKATQLAAQCLSRDPKARP 407
L R ++ ++ ++ L P+L H +K SQ A L ++ L DP R
Sbjct: 245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ-ARDLLSKMLVIDPAKRI 303
Query: 408 RMSEVVE 414
+ + ++
Sbjct: 304 SVDDALQ 310
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 32/187 (17%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A G + + T + T Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 185
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLT------GRRSMDK-NR---------PNGEHN 356
APE ++ D++S G ++ EM+ GR +D+ N+ P
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 245
Query: 357 LVEWARPHLGDKRRFYRLLDPRL---------EGHFSIKGSQKATQLAAQCLSRDPKARP 407
L R ++ ++ ++ L P+L H +K SQ A L ++ L DP R
Sbjct: 246 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ-ARDLLSKMLVIDPAKRI 304
Query: 408 RMSEVVE 414
+ + ++
Sbjct: 305 SVDDALQ 311
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 32/187 (17%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A G + + T + T Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 185
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLT------GRRSMDK-NR---------PNGEHN 356
APE ++ D++S G ++ EM+ GR +D+ N+ P
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 245
Query: 357 LVEWARPHLGDKRRFYRLLDPRL---------EGHFSIKGSQKATQLAAQCLSRDPKARP 407
L R ++ ++ ++ L P+L H +K SQ A L ++ L DP R
Sbjct: 246 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ-ARDLLSKMLVIDPAKRI 304
Query: 408 RMSEVVE 414
+ + ++
Sbjct: 305 SVDDALQ 311
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 32/187 (17%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A G + + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLT------GRRSMDK-NR---------PNGEHN 356
APE ++ D++S G ++ EM+ GR +D+ N+ P
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 357 LVEWARPHLGDKRRFYRLLDPRL---------EGHFSIKGSQKATQLAAQCLSRDPKARP 407
L R ++ ++ ++ L P+L H +K SQ A L ++ L DP R
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ-ARDLLSKMLVIDPAKRI 310
Query: 408 RMSEVVE 414
+ + ++
Sbjct: 311 SVDDALQ 317
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 14/137 (10%)
Query: 212 DQRLLVYEFMPRGSL---ENHLF---RKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPV 265
D+ ++YE+M S+ + + F + + +P + I +++H E K +
Sbjct: 116 DEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNI 173
Query: 266 IYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVM--TGHL 323
+RD K SNIL+D + KLSDFG + D K S GTY + PE+ + +
Sbjct: 174 CHRDVKPSNILMDKNGRVKLSDFG-ESEYMVDKKIKGSR---GTYEFMPPEFFSNESSYN 229
Query: 324 TSKSDVYSFGVVLLEML 340
+K D++S G+ L M
Sbjct: 230 GAKVDIWSLGICLYVMF 246
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 32/187 (17%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A G + + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYY 191
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLT------GRRSMDK-NR---------PNGEHN 356
APE ++ D++S G ++ EM+ GR +D+ N+ P
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 357 LVEWARPHLGDKRRFYRLLDPRL---------EGHFSIKGSQKATQLAAQCLSRDPKARP 407
L R ++ ++ ++ L P+L H +K SQ A L ++ L DP R
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ-ARDLLSKMLVIDPAKRI 310
Query: 408 RMSEVVE 414
+ + ++
Sbjct: 311 SVDDALQ 317
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 33/215 (15%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHP 199
++G G FG VF+ + E+ VA+K + LQ + E+ + + HP
Sbjct: 47 VIGNGSFGVVFQAKLVESD----------EVAIKKV----LQDKRFKNRELQIMRIVKHP 92
Query: 200 NLVKLVGYCIEDDQRL------LVYEFMPRGSLE-NHLFRKGSLPLPWSIRMKIALGAAK 252
N+V L + + + LV E++P + + K +P + +
Sbjct: 93 NVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLR 152
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNA-KLSDFGLAK--DAPEDGKTHVSTRVMGT 309
LA++H + +RD K N+LLD KL DFG AK A E + + +R
Sbjct: 153 SLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY--- 206
Query: 310 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGR 343
Y APE + + T+ D++S G V+ E++ G+
Sbjct: 207 --YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 93/212 (43%), Gaps = 27/212 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 194
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 20 LGSGQFAIVKKCR---------EKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGL 254
+LH N++ L +L+ E + G L + L +K SL + + G+
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI--LDGV 128
Query: 255 AFLHEEAEKPVIYRDFKTSNI-LLDADY---NAKLSDFGLAKDAPEDGKTHVSTRVMGTY 310
+LH K + + D K NI LLD + + KL DFGLA + EDG + GT
Sbjct: 129 NYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGVEF--KNIFGTP 182
Query: 311 GYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
+ APE V L ++D++S GV+ +L+G
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 38/231 (16%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 187
+ R+ +G+G +G V++G W EN VAVK + + K W
Sbjct: 4 RTVARDITLLECVGKGRYGEVWRGSWQGEN------------VAVKIFSS---RDEKSWF 48
Query: 188 AEVNFLGNLL--HPNLVKLVGYCI----EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWS 241
E ++ H N++ + + Q L+ + GSL ++L + +L
Sbjct: 49 RETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-QLTTLDTVSC 107
Query: 242 IRMKIALGAAKGLAFLHEEA----EKPVI-YRDFKTSNILLDADYNAKLSDFGLA-KDAP 295
+R I L A GLA LH E KP I +RD K+ NIL+ + ++D GLA +
Sbjct: 108 LR--IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ 165
Query: 296 EDGKTHVSTR-VMGTYGYAAPEY----VMTGHLTS--KSDVYSFGVVLLEM 339
+ V +GT Y APE + S + D+++FG+VL E+
Sbjct: 166 STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 23/208 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGNLLH 198
+G+G F V + VK TG A K +N L H++ E L H
Sbjct: 12 IGKGAFSVVRRC---------VKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSL-ENHLFRKGSLPLPWSIRMKIALGAAKGLAFL 257
N+V+L E+ LV++ + G L E+ + R+ S ++ L A L
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV-----L 117
Query: 258 HEEAEKPVIYRDFKTSNILLDADYN---AKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
H + V++RD K N+LL + KL+DFGLA + D + GT GY +
Sbjct: 118 HCH-QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYLS 174
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
PE + D+++ GV+L +L G
Sbjct: 175 PEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A G + + T + T Y
Sbjct: 143 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 196
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
APE ++ D++S G ++ EM+ +
Sbjct: 197 RAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 92/212 (43%), Gaps = 27/212 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHK------EWLAEVNFLG 194
LG G F V K + TGL A K + + + E EV+ L
Sbjct: 20 LGSGQFAIVKKCR---------EKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGL 254
+LH N++ L +L+ E + G L + L +K SL + + G+
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI--LDGV 128
Query: 255 AFLHEEAEKPVIYRDFKTSNI-LLDADY---NAKLSDFGLAKDAPEDGKTHVSTRVMGTY 310
+LH K + + D K NI LLD + + KL DFGLA + EDG + GT
Sbjct: 129 NYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGVEF--KNIFGTP 182
Query: 311 GYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
+ APE V L ++D++S GV+ +L+G
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 23/214 (10%)
Query: 133 RNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 192
+ F +LG G F VF + TG A+K + E+
Sbjct: 9 KTFIFMEVLGSGAFSEVF---------LVKQRLTGKLFALKCIKKSPAFRDSSLENEIAV 59
Query: 193 LGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLP-WSIRMKIALGAA 251
L + H N+V L LV + + G L + + +G S+ ++ L A
Sbjct: 60 LKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAV 119
Query: 252 KGLAFLHEEAEKPVIYRDFKTSNIL-LDADYNAKL--SDFGLAKDAPEDGKTHVSTRVMG 308
K +LHE +++RD K N+L L + N+K+ +DFGL+K ++G + + G
Sbjct: 120 K---YLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSK-MEQNG---IMSTACG 169
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
T GY APE + + D +S GV+ +L G
Sbjct: 170 TPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 93/212 (43%), Gaps = 27/212 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 194
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 20 LGSGQFAIVKKCR---------EKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGL 254
+LH N++ L +L+ E + G L + L +K SL + + G+
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI--LDGV 128
Query: 255 AFLHEEAEKPVIYRDFKTSNI-LLDADY---NAKLSDFGLAKDAPEDGKTHVSTRVMGTY 310
+LH K + + D K NI LLD + + KL DFGLA + EDG + GT
Sbjct: 129 NYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGVEF--KNIFGTP 182
Query: 311 GYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
+ APE V L ++D++S GV+ +L+G
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 93/212 (43%), Gaps = 27/212 (12%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 194
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 20 LGSGQFAIVKKCR---------EKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGL 254
+LH N++ L +L+ E + G L + L +K SL + + G+
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI--LDGV 128
Query: 255 AFLHEEAEKPVIYRDFKTSNI-LLDADY---NAKLSDFGLAKDAPEDGKTHVSTRVMGTY 310
+LH K + + D K NI LLD + + KL DFGLA + EDG + GT
Sbjct: 129 NYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGVEF--KNIFGTP 182
Query: 311 GYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
+ APE V L ++D++S GV+ +L+G
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 99/231 (42%), Gaps = 38/231 (16%)
Query: 129 KLATRNFRPESLLGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 187
+ R +G+G +G V++G W EN VAVK + + K W
Sbjct: 33 RTVARQITLLECVGKGRYGEVWRGSWQGEN------------VAVKIFSS---RDEKSWF 77
Query: 188 AEVNFLGNLL--HPNLVKLVGYCI----EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWS 241
E ++ H N++ + + Q L+ + GSL ++L + +L
Sbjct: 78 RETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-QLTTLDTVSC 136
Query: 242 IRMKIALGAAKGLAFLHEEA----EKPVI-YRDFKTSNILLDADYNAKLSDFGLA-KDAP 295
+R I L A GLA LH E KP I +RD K+ NIL+ + ++D GLA +
Sbjct: 137 LR--IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ 194
Query: 296 EDGKTHVSTR-VMGTYGYAAPEY----VMTGHLTS--KSDVYSFGVVLLEM 339
+ V +GT Y APE + S + D+++FG+VL E+
Sbjct: 195 STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A G + + T + T Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYY 185
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
APE ++ D++S G ++ EM+ +
Sbjct: 186 RAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 23/208 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGNLLH 198
LG+G F V + +K TG A K +N L H++ E L H
Sbjct: 12 LGKGAFSVVRRC---------MKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSL-ENHLFRKGSLPLPWSIRMKIALGAAKGLAFL 257
PN+V+L E+ LV++ + G L E+ + R+ S ++ L +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHL- 121
Query: 258 HEEAEKPVIYRDFKTSNILLDADYN---AKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
+++RD K N+LL + KL+DFGLA + D + GT GY +
Sbjct: 122 -----NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYLS 174
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
PE + D+++ GV+L +L G
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 12/158 (7%)
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL 248
EV+ L +LH N++ L +L+ E + G L + L +K SL + +
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNI-LLDADY---NAKLSDFGLAKDAPEDGKTHVST 304
G+ +LH K + + D K NI LLD + + KL DFGLA + EDG
Sbjct: 125 --LDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGVEF--K 176
Query: 305 RVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
+ GT + APE V L ++D++S GV+ +L+G
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 87/215 (40%), Gaps = 19/215 (8%)
Query: 135 FRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLAEVNF 192
+ + + G +G V G E +K +T+N D K L E+
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC-KRVLREIRL 82
Query: 193 LGNLLHPNLVKLVGYCIEDDQ-----RLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
L + HPN++ L + ++ LV E M R L + + + P I+
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQY-FM 140
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAK-DAPEDGKTHVSTRV 306
GL LHE V++RD NILL + + + DF LA+ D + KTH T
Sbjct: 141 YHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTH- 196
Query: 307 MGTYGYAAPEYVMTGH-LTSKSDVYSFGVVLLEML 340
Y APE VM T D++S G V+ EM
Sbjct: 197 ---RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 87/215 (40%), Gaps = 19/215 (8%)
Query: 135 FRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLAEVNF 192
+ + + G +G V G E +K +T+N D K L E+
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC-KRVLREIRL 82
Query: 193 LGNLLHPNLVKLVGYCIEDDQ-----RLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIA 247
L + HPN++ L + ++ LV E M R L + + + P I+
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQY-FM 140
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAK-DAPEDGKTHVSTRV 306
GL LHE V++RD NILL + + + DF LA+ D + KTH T
Sbjct: 141 YHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTH- 196
Query: 307 MGTYGYAAPEYVMTGH-LTSKSDVYSFGVVLLEML 340
Y APE VM T D++S G V+ EM
Sbjct: 197 ---RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 97/219 (44%), Gaps = 38/219 (17%)
Query: 141 LGEGGFGCVFKG-WVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLL-- 197
+G+G +G V++G W EN VAVK + + K W E ++
Sbjct: 16 VGKGRYGEVWRGSWQGEN------------VAVKIFSS---RDEKSWFRETELYNTVMLR 60
Query: 198 HPNLVKLVGYCI----EDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKG 253
H N++ + + Q L+ + GSL ++L + +L +R I L A G
Sbjct: 61 HENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-QLTTLDTVSCLR--IVLSIASG 117
Query: 254 LAFLHEEA----EKPVI-YRDFKTSNILLDADYNAKLSDFGLA-KDAPEDGKTHVSTR-V 306
LA LH E KP I +RD K+ NIL+ + ++D GLA + + V
Sbjct: 118 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR 177
Query: 307 MGTYGYAAPEY----VMTGHLTS--KSDVYSFGVVLLEM 339
+GT Y APE + S + D+++FG+VL E+
Sbjct: 178 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 104/251 (41%), Gaps = 42/251 (16%)
Query: 109 KFSEELKVASQLRKFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVK-PGTG 167
+F E K +QL K +++L +F ++G G FG V A VK T
Sbjct: 54 EFLEWAKPFTQLVK----EMQLHREDFEIIKVIGRGAFGEV----------AVVKMKNTE 99
Query: 168 LTVAVKTLNHDGLQGHKE---WLAEVNFLGNLLHPNLVKLVGYCIEDDQRL-LVYEFMPR 223
A+K LN + E + E + L N + + Y +D+ L LV ++
Sbjct: 100 RIYAMKILNKWEMLKRAETACFREERDVLVNG-DCQWITALHYAFQDENHLYLVMDYYVG 158
Query: 224 GSLENHLFRKGSLPLPWSI------RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILL 277
G L L K LP + M +A+ + L ++H RD K N+LL
Sbjct: 159 GDLLT-LLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLL 208
Query: 278 DADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMT-----GHLTSKSDVYSF 332
D + + +L+DFG +DG S V GT Y +PE + G + D +S
Sbjct: 209 DVNGHIRLADFGSCLKMNDDGTVQSSVAV-GTPDYISPEILQAMEDGMGKYGPECDWWSL 267
Query: 333 GVVLLEMLTGR 343
GV + EML G
Sbjct: 268 GVCMYEMLYGE 278
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 104/251 (41%), Gaps = 42/251 (16%)
Query: 109 KFSEELKVASQLRKFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVK-PGTG 167
+F E K +QL K +++L +F ++G G FG V A VK T
Sbjct: 70 EFLEWAKPFTQLVK----EMQLHREDFEIIKVIGRGAFGEV----------AVVKMKNTE 115
Query: 168 LTVAVKTLNHDGLQGHKE---WLAEVNFLGNLLHPNLVKLVGYCIEDDQRL-LVYEFMPR 223
A+K LN + E + E + L N + + Y +D+ L LV ++
Sbjct: 116 RIYAMKILNKWEMLKRAETACFREERDVLVNG-DCQWITALHYAFQDENHLYLVMDYYVG 174
Query: 224 GSLENHLFRKGSLPLPWSI------RMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILL 277
G L L K LP + M +A+ + L ++H RD K N+LL
Sbjct: 175 GDLLT-LLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLL 224
Query: 278 DADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMT-----GHLTSKSDVYSF 332
D + + +L+DFG +DG S V GT Y +PE + G + D +S
Sbjct: 225 DVNGHIRLADFGSCLKMNDDGTVQSSVAV-GTPDYISPEILQAMEDGMGKYGPECDWWSL 283
Query: 333 GVVLLEMLTGR 343
GV + EML G
Sbjct: 284 GVCMYEMLYGE 294
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 35/221 (15%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLLHPN 200
LG GG G VF V VA+K + Q K L E+ + L H N
Sbjct: 19 LGCGGNGLVFSA---------VDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDN 69
Query: 201 LVKL--------------VGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKI 246
+VK+ VG E + +V E+M L N + +G L L R+
Sbjct: 70 IVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLAN-VLEQGPL-LEEHARL-F 125
Query: 247 ALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDA-DYNAKLSDFGLAK--DAPEDGKTHVS 303
+GL ++H V++RD K +N+ ++ D K+ DFGLA+ D K H+S
Sbjct: 126 MYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLS 182
Query: 304 TRVMGTYGYAAPEYVMT-GHLTSKSDVYSFGVVLLEMLTGR 343
++ T Y +P +++ + T D+++ G + EMLTG+
Sbjct: 183 EGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 111/284 (39%), Gaps = 57/284 (20%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 194
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 19 LGSGQFAVVKKCR---------EKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIR-MKIALGAAKG 253
+ HPN++ L +L+ E + G L + L K SL + +K L G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---G 126
Query: 254 LAFLHEEAEKPVIYRDFKTSNILLDADYNA-----KLSDFGLAK--DAPEDGKTHVSTRV 306
+ +LH + + D K NI+L D N K+ DFGLA D + K +
Sbjct: 127 VYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNEFKN-----I 177
Query: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
GT + APE V L ++D++S GV+ +L+G A P LG
Sbjct: 178 FGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLG 219
Query: 367 DKRR----FYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKAR 406
D ++ ++ E + S A + L +DPK R
Sbjct: 220 DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 94/218 (43%), Gaps = 30/218 (13%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLL-H 198
LLGEG + V V G AVK + EV L +
Sbjct: 20 LLGEGAYAKV---------QGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGN 70
Query: 199 PNLVKLVGYCIEDDQRL-LVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFL 257
N+++L+ + EDD R LV+E + GS+ H+ ++ + R+ + AA L FL
Sbjct: 71 KNILELIEF-FEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAA--LDFL 127
Query: 258 HEEAEKPVIYRDFKTSNILLDADYN---AKLSDFGLAKDAP-EDGKTHVSTRVM----GT 309
H K + +RD K NIL ++ K+ DF L + T ++T + G+
Sbjct: 128 H---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGS 184
Query: 310 YGYAAPEY--VMTGHLT---SKSDVYSFGVVLLEMLTG 342
Y APE V T T + D++S GVVL ML+G
Sbjct: 185 AEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 23/208 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGNLLH 198
LG+G F V + +K TG A K +N L H++ E L H
Sbjct: 12 LGKGAFSVVRRC---------MKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSL-ENHLFRKGSLPLPWSIRMKIALGAAKGLAFL 257
PN+V+L E+ LV++ + G L E+ + R+ S ++ L +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHL- 121
Query: 258 HEEAEKPVIYRDFKTSNILLDADYN---AKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
+++RD K N+LL + KL+DFGLA + D + GT GY +
Sbjct: 122 -----NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYLS 174
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
PE + D+++ GV+L +L G
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 117/305 (38%), Gaps = 43/305 (14%)
Query: 121 RKFMFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGL 180
R M +D L + ++G+G F V + E G + + K + GL
Sbjct: 14 RGSMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQ---QFAVKIVDVAKFTSSPGL 70
Query: 181 QGHKEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPW 240
++ E + L HP++V+L+ D +V+EFM L + ++ +
Sbjct: 71 ST-EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVY 129
Query: 241 S--IRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNA---KLSDFGLAKDAP 295
S + + L + H+ +I+RD K +LL + N+ KL FG+A
Sbjct: 130 SEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG 186
Query: 296 EDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
E G V+ +GT + APE V DV+ GV+L +L+G
Sbjct: 187 ESGL--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG------------- 231
Query: 356 NLVEWARPHLGDKRRFYR-------LLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPR 408
P G K R + ++PR H S+ A L + L DP R
Sbjct: 232 -----CLPFYGTKERLFEGIIKGKYKMNPRQWSHI----SESAKDLVRRMLMLDPAERIT 282
Query: 409 MSEVV 413
+ E +
Sbjct: 283 VYEAL 287
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 87/220 (39%), Gaps = 36/220 (16%)
Query: 198 HPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFL 257
HPN++ L + +V E M G L + + R+ + + K + +L
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREA--SAVLFTITKTVEYL 132
Query: 258 HEEAEKPVIYRDFKTSNIL-LDADYN---AKLSDFGLAKDA-PEDGKTHVSTRVMGTYGY 312
H + V++RD K SNIL +D N ++ DFG AK E+G T +
Sbjct: 133 HAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY---TANF 186
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFY 372
APE + + D++S GV+L MLTG NG + E +G
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPF----ANGPDDTPEEILARIG------ 236
Query: 373 RLLDPRLEGHFSIKG------SQKATQLAAQCLSRDPKAR 406
G FS+ G S A L ++ L DP R
Sbjct: 237 -------SGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQR 269
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 96/221 (43%), Gaps = 35/221 (15%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGNLLH 198
+LG+G VF+G ++ TG A+K N+ L+ + E L L H
Sbjct: 16 ILGQGATANVFRGRHKK---------TGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH 66
Query: 199 PNLVKLVGYCIEDD----QRLLVYEFMPRGSLENHLFR-KGSLPLPWSIRMKIALGAAKG 253
N+VKL + IE++ ++L+ EF P GSL L + LP S + + G
Sbjct: 67 KNIVKL--FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124
Query: 254 LAFLHEEAEKPVIYRDFKTSNILL----DADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+ L E +++R+ K NI+ D KL+DFG A++ ED + VS + GT
Sbjct: 125 MNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL-EDDEQFVS--LYGT 178
Query: 310 YGYAAPEYVMTGHLT--------SKSDVYSFGVVLLEMLTG 342
Y P+ L + D++S GV TG
Sbjct: 179 EEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 23/208 (11%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGNLLH 198
LG+G F V + VK G A +N L H++ E L H
Sbjct: 19 LGKGAFSVVRRC---------VKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 199 PNLVKLVGYCIEDDQRLLVYEFMPRGSL-ENHLFRKGSLPLPWSIRMKIALGAAKGLAFL 257
PN+V+L E+ L+++ + G L E+ + R+ S ++ L A L
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV-----L 124
Query: 258 HEEAEKPVIYRDFKTSNILLDADYN---AKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAA 314
H + V++R+ K N+LL + KL+DFGLA + +G+ GT GY +
Sbjct: 125 HCH-QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV--EGEQQAWFGFAGTPGYLS 181
Query: 315 PEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
PE + D+++ GV+L +L G
Sbjct: 182 PEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 92/228 (40%), Gaps = 36/228 (15%)
Query: 198 HPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFL 257
HPN++ L + LV E M G L + + R+ + + +G K + +L
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIG--KTVEYL 137
Query: 258 HEEAEKPVIYRDFKTSNIL-LDADYN---AKLSDFGLAKDA-PEDGKTHVSTRVMGTYGY 312
H + V++RD K SNIL +D N ++ DFG AK E+G T +
Sbjct: 138 HSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY---TANF 191
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFY 372
APE + D++S G++L ML G NG + E +G
Sbjct: 192 VAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF----ANGPSDTPEEILTRIGS----- 242
Query: 373 RLLDPRLEGHFSIKG------SQKATQLAAQCLSRDPKARPRMSEVVE 414
G F++ G S+ A L ++ L DP R +V++
Sbjct: 243 --------GKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQ 282
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 21/216 (9%)
Query: 132 TRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAE 189
T +++ LG+G F V + VK A K +N L H++ E
Sbjct: 30 TDDYQLFEELGKGAFSVVRRC---------VKKTPTQEYAAKIINTKKLSARDHQKLERE 80
Query: 190 VNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALG 249
L HPN+V+L E+ LV++ + G L + + + +
Sbjct: 81 ARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-----EYYSEADASHC 135
Query: 250 AAKGLAFLHEEAEKPVIYRDFKTSNILLDADYN---AKLSDFGLAKDAPEDGKTHVSTRV 306
+ L ++ + +++RD K N+LL + KL+DFGLA + G+
Sbjct: 136 IHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEV--QGEQQAWFGF 193
Query: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
GT GY +PE + D+++ GV+L +L G
Sbjct: 194 AGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---CTNFMMTPYVVTRYY 191
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
APE ++ + D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 92/228 (40%), Gaps = 36/228 (15%)
Query: 198 HPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFL 257
HPN++ L + LV E M G L + + R+ + + +G K + +L
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIG--KTVEYL 137
Query: 258 HEEAEKPVIYRDFKTSNIL-LDADYN---AKLSDFGLAKDA-PEDGKTHVSTRVMGTYGY 312
H + V++RD K SNIL +D N ++ DFG AK E+G T +
Sbjct: 138 HSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY---TANF 191
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFY 372
APE + D++S G++L ML G NG + E +G
Sbjct: 192 VAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF----ANGPSDTPEEILTRIG------ 241
Query: 373 RLLDPRLEGHFSIKG------SQKATQLAAQCLSRDPKARPRMSEVVE 414
G F++ G S+ A L ++ L DP R +V++
Sbjct: 242 -------SGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQ 282
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 116/302 (38%), Gaps = 43/302 (14%)
Query: 124 MFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGH 183
M +D L + ++G+G F V + E G + + K + GL
Sbjct: 15 MADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQ---QFAVKIVDVAKFTSSPGLST- 70
Query: 184 KEWLAEVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWS-- 241
++ E + L HP++V+L+ D +V+EFM L + ++ +S
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEA 130
Query: 242 IRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNA---KLSDFGLAKDAPEDG 298
+ + L + H+ +I+RD K +LL + N+ KL FG+A E G
Sbjct: 131 VASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG 187
Query: 299 KTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLV 358
V+ +GT + APE V DV+ GV+L +L+G
Sbjct: 188 L--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG---------------- 229
Query: 359 EWARPHLGDKRRFYR-------LLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSE 411
P G K R + ++PR H S+ A L + L DP R + E
Sbjct: 230 --CLPFYGTKERLFEGIIKGKYKMNPRQWSHI----SESAKDLVRRMLMLDPAERITVYE 283
Query: 412 VV 413
+
Sbjct: 284 AL 285
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 96/234 (41%), Gaps = 48/234 (20%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTL--NHDGLQGHKEWLAEVNFLGNLL 197
L+G G +G V + + + VA+K + + L K L E+ L L
Sbjct: 60 LIGTGSYGHVCEAYDKLEKR---------VVAIKKILRVFEDLIDCKRILREIAILNRLN 110
Query: 198 HPNLVKLVGYCIEDD-----QRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAK 252
H ++VK++ I D + +V E S LFR I+ +
Sbjct: 111 HDHVVKVLDIVIPKDVEKFDELYVVLEIA--DSDFKKLFRTPVYLTELHIKT-LLYNLLV 167
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAK--DAPEDGKTHVS------- 303
G+ ++H +++RD K +N L++ D + K+ DFGLA+ D PE+G + +
Sbjct: 168 GVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDD 224
Query: 304 ----------------TRVMGTYGYAAPEYV-MTGHLTSKSDVYSFGVVLLEML 340
T + T Y APE + + + T DV+S G + E+L
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 111/284 (39%), Gaps = 57/284 (20%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 194
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 19 LGSGQFAVVKKCR---------EKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIR-MKIALGAAKG 253
+ HPN++ L +L+ E + G L + L K SL + +K L G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---G 126
Query: 254 LAFLHEEAEKPVIYRDFKTSNILLDADYNA-----KLSDFGLAK--DAPEDGKTHVSTRV 306
+ +LH + + D K NI+L D N K+ DFGLA D + K +
Sbjct: 127 VYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNEFKN-----I 177
Query: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
GT + APE V L ++D++S GV+ +L+G A P LG
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLG 219
Query: 367 DKRRF----YRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKAR 406
D ++ ++ E + S A + L +DPK R
Sbjct: 220 DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A G + + + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMEPEVVTRYY 191
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
APE ++ D++S G ++ EM+ +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 123/308 (39%), Gaps = 59/308 (19%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 194
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 18 LGSGQFAVVKKCR---------EKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIR-MKIALGAAKG 253
+ HPN++ L +L+ E + G L + L K SL + +K L G
Sbjct: 69 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---G 125
Query: 254 LAFLHEEAEKPVIYRDFKTSNILLDADYNA-----KLSDFGLAK--DAPEDGKTHVSTRV 306
+ +LH + + D K NI+L D N K+ DFGLA D + K +
Sbjct: 126 VYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNEFKN-----I 176
Query: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
GT + APE V L ++D++S GV+ +L+G A P LG
Sbjct: 177 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLG 218
Query: 367 DKRRF----YRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVET--LKPLQ 420
D ++ ++ E + S A + L +DPK R + + ++ +KP
Sbjct: 219 DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 278
Query: 421 NLKDMASS 428
+ ++S+
Sbjct: 279 TQQALSSA 286
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 123/308 (39%), Gaps = 59/308 (19%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 194
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 18 LGSGQFAVVKKCR---------EKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIR-MKIALGAAKG 253
+ HPN++ L +L+ E + G L + L K SL + +K L G
Sbjct: 69 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---G 125
Query: 254 LAFLHEEAEKPVIYRDFKTSNILLDADYNA-----KLSDFGLAK--DAPEDGKTHVSTRV 306
+ +LH + + D K NI+L D N K+ DFGLA D + K +
Sbjct: 126 VYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNEFKN-----I 176
Query: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
GT + APE V L ++D++S GV+ +L+G A P LG
Sbjct: 177 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLG 218
Query: 367 DKRRF----YRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVET--LKPLQ 420
D ++ ++ E + S A + L +DPK R + + ++ +KP
Sbjct: 219 DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 278
Query: 421 NLKDMASS 428
+ ++S+
Sbjct: 279 TQQALSSA 286
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 123/308 (39%), Gaps = 59/308 (19%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 194
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 19 LGSGQFAVVKKCR---------EKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIR-MKIALGAAKG 253
+ HPN++ L +L+ E + G L + L K SL + +K L G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---G 126
Query: 254 LAFLHEEAEKPVIYRDFKTSNILLDADYNA-----KLSDFGLAK--DAPEDGKTHVSTRV 306
+ +LH + + D K NI+L D N K+ DFGLA D + K +
Sbjct: 127 VYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNEFKN-----I 177
Query: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
GT + APE V L ++D++S GV+ +L+G A P LG
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLG 219
Query: 367 DKRRF----YRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVET--LKPLQ 420
D ++ ++ E + S A + L +DPK R + + ++ +KP
Sbjct: 220 DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 279
Query: 421 NLKDMASS 428
+ ++S+
Sbjct: 280 TQQALSSA 287
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 123/308 (39%), Gaps = 59/308 (19%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 194
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 19 LGSGKFAVVKKCR---------EKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIR-MKIALGAAKG 253
+ HPN++ L +L+ E + G L + L K SL + +K L G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---G 126
Query: 254 LAFLHEEAEKPVIYRDFKTSNILLDADYNA-----KLSDFGLAK--DAPEDGKTHVSTRV 306
+ +LH + + D K NI+L D N K+ DFGLA D + K +
Sbjct: 127 VYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNEFKN-----I 177
Query: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
GT + APE V L ++D++S GV+ +L+G A P LG
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLG 219
Query: 367 DKRRF----YRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVET--LKPLQ 420
D ++ ++ E + S A + L +DPK R + + ++ +KP
Sbjct: 220 DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 279
Query: 421 NLKDMASS 428
+ ++S+
Sbjct: 280 TQQALSSA 287
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 111/284 (39%), Gaps = 57/284 (20%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 194
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 19 LGSGQFAVVKKCR---------EKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIR-MKIALGAAKG 253
+ HPN++ L +L+ E + G L + L K SL + +K L G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---G 126
Query: 254 LAFLHEEAEKPVIYRDFKTSNILLDADYNA-----KLSDFGLAK--DAPEDGKTHVSTRV 306
+ +LH + + D K NI+L D N K+ DFGLA D + K +
Sbjct: 127 VYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNEFKN-----I 177
Query: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
GT + APE V L ++D++S GV+ +L+G A P LG
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLG 219
Query: 367 DKRRF----YRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKAR 406
D ++ ++ E + S A + L +DPK R
Sbjct: 220 DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 96/237 (40%), Gaps = 40/237 (16%)
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIAL 248
EV+ L + HPN++ L +L+ E + G L + L K SL + +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 249 GAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNA-----KLSDFGLAK--DAPEDGKTH 301
G+ +LH + + D K NI+L D N K+ DFGLA D + K
Sbjct: 124 --LNGVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNEFKN- 176
Query: 302 VSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWA 361
+ GT + APE V L ++D++S GV+ +L+G A
Sbjct: 177 ----IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------A 214
Query: 362 RPHLGDKRR----FYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVE 414
P LGD ++ ++ E + S A + L +DPK R + + ++
Sbjct: 215 SPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A + T + T Y
Sbjct: 136 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---STNFMMTPYVVTRYY 189
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
APE ++ D++S G ++ E++ G
Sbjct: 190 RAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 35/221 (15%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGNLLH 198
+LG+G VF+G ++ TG A+K N+ L+ + E L L H
Sbjct: 16 ILGQGATANVFRGRHKK---------TGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH 66
Query: 199 PNLVKLVGYCIEDD----QRLLVYEFMPRGSLENHLFR-KGSLPLPWSIRMKIALGAAKG 253
N+VKL + IE++ ++L+ EF P GSL L + LP S + + G
Sbjct: 67 KNIVKL--FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124
Query: 254 LAFLHEEAEKPVIYRDFKTSNILL----DADYNAKLSDFGLAKDAPEDGKTHVSTRVMGT 309
+ L E +++R+ K NI+ D KL+DFG A++ +D + + GT
Sbjct: 125 MNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF---VXLYGT 178
Query: 310 YGYAAPEYVMTGHLT--------SKSDVYSFGVVLLEMLTG 342
Y P+ L + D++S GV TG
Sbjct: 179 EEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 111/284 (39%), Gaps = 57/284 (20%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 194
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 19 LGSGQFAVVKKCR---------EKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIR-MKIALGAAKG 253
+ HPN++ L +L+ E + G L + L K SL + +K L G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---G 126
Query: 254 LAFLHEEAEKPVIYRDFKTSNILLDADYNA-----KLSDFGLAK--DAPEDGKTHVSTRV 306
+ +LH + + D K NI+L D N K+ DFGLA D + K +
Sbjct: 127 VYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNEFKN-----I 177
Query: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
GT + APE V L ++D++S GV+ +L+G A P LG
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLG 219
Query: 367 DKRRF----YRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKAR 406
D ++ ++ E + S A + L +DPK R
Sbjct: 220 DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 44/254 (17%)
Query: 189 EVNFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIR-MKIA 247
EV+ L + HPN++ L +L+ E + G L + L K SL + +K
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 248 LGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNA-----KLSDFGLAK--DAPEDGKT 300
L G+ +LH + + D K NI+L D N K+ DFGLA D + K
Sbjct: 124 LN---GVYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 301 HVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEW 360
+ GT + APE V L ++D++S GV+ +L+G
Sbjct: 177 -----IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ 213
Query: 361 ARPHLGDKRRF----YRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVET- 415
A P LGD ++ ++ E + S A + L +DPK R + + ++
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 416 -LKPLQNLKDMASS 428
+KP + ++S+
Sbjct: 274 WIKPKDTQQALSSA 287
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 33/218 (15%)
Query: 135 FRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTL----NHDGLQGHKEWLAEV 190
+R + LGEG +G V+K + T TVA+K + +G+ G + EV
Sbjct: 36 YRRITKLGEGTYGEVYKA---------IDTVTNETVAIKRIRLEHEEEGVPGTA--IREV 84
Query: 191 NFLGNLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGA 250
+ L L H N+++L + + L++E+ L+ ++ + + + +
Sbjct: 85 SLLKELQHRNIIELKSVIHHNHRLHLIFEY-AENDLKKYMDKNPDVSM--RVIKSFLYQL 141
Query: 251 AKGLAFLHEEAEKPVIYRDFKTSNILLDADYNA-----KLSDFGLAKD--APEDGKTHVS 303
G+ F H + ++RD K N+LL + K+ DFGLA+ P TH
Sbjct: 142 INGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTH-- 196
Query: 304 TRVMGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEML 340
+ T Y PE ++ + H ++ D++S + EML
Sbjct: 197 --EIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 111/284 (39%), Gaps = 57/284 (20%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 194
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 19 LGSGQFAVVKKCR---------EKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIR-MKIALGAAKG 253
+ HPN++ L +L+ E + G L + L K SL + +K L G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---G 126
Query: 254 LAFLHEEAEKPVIYRDFKTSNILLDADYNA-----KLSDFGLAK--DAPEDGKTHVSTRV 306
+ +LH + + D K NI+L D N K+ DFGLA D + K +
Sbjct: 127 VYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNEFKN-----I 177
Query: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
GT + APE V L ++D++S GV+ +L+G A P LG
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLG 219
Query: 367 DKRRF----YRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKAR 406
D ++ ++ E + S A + L +DPK R
Sbjct: 220 DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 125/306 (40%), Gaps = 50/306 (16%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-----WLAEVNFLGN 195
+G+G FG VFK + TG VA+K + ++ KE L E+ L
Sbjct: 26 IGQGTFGEVFKARHRK---------TGQKVALKKV---LMENEKEGFPITALREIKILQL 73
Query: 196 LLHPNLVKLVGYCIEDDQ--------RLLVYEFMPR---GSLENHLFRKGSLPLPWSIRM 244
L H N+V L+ C LV++F G L N L + + ++M
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM 133
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKD---APEDGKTH 301
+ GL ++H +++RD K +N+L+ D KL+DFGLA+ A
Sbjct: 134 LL-----NGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 185
Query: 302 VSTRVMGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEW 360
RV+ T Y PE ++ D++ G ++ EM T M N + L+
Sbjct: 186 YXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ 244
Query: 361 ----ARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETL 416
P + Y L + +LE +KG ++ + + RDP A + +++ L
Sbjct: 245 LCGSITPEVWPNVDNYELYE-KLE---LVKGQKRKVKDRLKAYVRDPYALDLIDKLL-VL 299
Query: 417 KPLQNL 422
P Q +
Sbjct: 300 DPAQRI 305
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 253 GLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
G+ LH +I+RD K SNI++ +D K+ DFGLA+ A G + + + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMEPEVVTRYY 191
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLTGR 343
APE ++ D++S G ++ EM+ +
Sbjct: 192 RAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 111/284 (39%), Gaps = 57/284 (20%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 194
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 19 LGSGQFAVVKKCR---------EKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIR-MKIALGAAKG 253
+ HPN++ L +L+ E + G L + L K SL + +K L G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---G 126
Query: 254 LAFLHEEAEKPVIYRDFKTSNILLDADYNA-----KLSDFGLAK--DAPEDGKTHVSTRV 306
+ +LH + + D K NI+L D N K+ DFGLA D + K +
Sbjct: 127 VYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNEFKN-----I 177
Query: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
GT + APE V L ++D++S GV+ +L+G A P LG
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLG 219
Query: 367 DKRRF----YRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKAR 406
D ++ ++ E + S A + L +DPK R
Sbjct: 220 DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 111/284 (39%), Gaps = 57/284 (20%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 194
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 19 LGSGQFAVVKKCR---------EKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIR-MKIALGAAKG 253
+ HPN++ L +L+ E + G L + L K SL + +K L G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILN---G 126
Query: 254 LAFLHEEAEKPVIYRDFKTSNILLDADYNA-----KLSDFGLAK--DAPEDGKTHVSTRV 306
+ +LH + + D K NI+L D N K+ DFGLA D + K +
Sbjct: 127 VYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNEFKN-----I 177
Query: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
GT + APE V L ++D++S GV+ +L+G A P LG
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLG 219
Query: 367 DKRRF----YRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKAR 406
D ++ ++ E + S A + L +DPK R
Sbjct: 220 DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKR 263
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 123/308 (39%), Gaps = 59/308 (19%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 194
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 19 LGSGQFAVVKKCR---------EKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIR-MKIALGAAKG 253
+ HPN++ L +L+ E + G L + L K SL + +K L G
Sbjct: 70 EIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILN---G 126
Query: 254 LAFLHEEAEKPVIYRDFKTSNILLDADYNA-----KLSDFGLAK--DAPEDGKTHVSTRV 306
+ +LH + + D K NI+L D N K+ DFGLA D + K +
Sbjct: 127 VYYLHS---LQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNEFKN-----I 177
Query: 307 MGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG 366
GT + APE V L ++D++S GV+ +L+G A P LG
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG------------------ASPFLG 219
Query: 367 DKRRF----YRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVET--LKPLQ 420
D ++ ++ E + S A + L +DPK R + + ++ +KP
Sbjct: 220 DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 279
Query: 421 NLKDMASS 428
+ ++S+
Sbjct: 280 TQQALSSA 287
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 119/280 (42%), Gaps = 34/280 (12%)
Query: 147 GCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGNLLHPNLVKLV 205
GC+ G + A + G V +K L H G + +AE FL ++HP++V++
Sbjct: 86 GCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIF 145
Query: 206 GYCIEDDQR-----LLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEE 260
+ D+ +V E++ SL+ R LP + + L L++LH
Sbjct: 146 NFVEHTDRHGDPVGYIVMEYVGGQSLK----RSKGQKLPVAEAIAYLLEILPALSYLHSI 201
Query: 261 AEKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMT 320
++Y D K NI+L + KL D G G + GT G+ APE V T
Sbjct: 202 G---LVYNDLKPENIML-TEEQLKLIDLGAVSRINSFGYLY------GTPGFQAPEIVRT 251
Query: 321 GHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEH-NLVEWARPHLGDKRRFYRLL---- 375
G T +D+Y+ G L + ++D NG + + + P L + RLL
Sbjct: 252 GP-TVATDIYTVGRTLAAL-----TLDLPTRNGRYVDGLPEDDPVLKTYDSYGRLLRRAI 305
Query: 376 --DPRLEGHFSIKGSQKATQLAAQCLSRDPKA-RPRMSEV 412
DPR + + S + T + + +++D RP +S +
Sbjct: 306 DPDPRQRFTTAEEMSAQLTGVLREVVAQDTGVPRPGLSTI 345
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 125/306 (40%), Gaps = 50/306 (16%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-----WLAEVNFLGN 195
+G+G FG VFK + TG VA+K + ++ KE L E+ L
Sbjct: 26 IGQGTFGEVFKARHRK---------TGQKVALKKV---LMENEKEGFPITALREIKILQL 73
Query: 196 LLHPNLVKLVGYCIEDDQ--------RLLVYEFMPR---GSLENHLFRKGSLPLPWSIRM 244
L H N+V L+ C LV++F G L N L + + ++M
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM 133
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKD---APEDGKTH 301
+ GL ++H +++RD K +N+L+ D KL+DFGLA+ A
Sbjct: 134 LL-----NGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 185
Query: 302 VSTRVMGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEW 360
RV+ T Y PE ++ D++ G ++ EM T M N + L+
Sbjct: 186 YXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ 244
Query: 361 ----ARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETL 416
P + Y L + +LE +KG ++ + + RDP A + +++ L
Sbjct: 245 LCGSITPEVWPNVDNYELYE-KLE---LVKGQKRKVKDRLKAYVRDPYALDLIDKLL-VL 299
Query: 417 KPLQNL 422
P Q +
Sbjct: 300 DPAQRI 305
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 125/306 (40%), Gaps = 50/306 (16%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-----WLAEVNFLGN 195
+G+G FG VFK + TG VA+K + ++ KE L E+ L
Sbjct: 25 IGQGTFGEVFKARHRK---------TGQKVALKKV---LMENEKEGFPITALREIKILQL 72
Query: 196 LLHPNLVKLVGYCIEDDQ--------RLLVYEFMPR---GSLENHLFRKGSLPLPWSIRM 244
L H N+V L+ C LV++F G L N L + + ++M
Sbjct: 73 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM 132
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKD---APEDGKTH 301
+ GL ++H +++RD K +N+L+ D KL+DFGLA+ A
Sbjct: 133 LL-----NGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 184
Query: 302 VSTRVMGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEW 360
RV+ T Y PE ++ D++ G ++ EM T M N + L+
Sbjct: 185 YXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ 243
Query: 361 ----ARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETL 416
P + Y L + +LE +KG ++ + + RDP A + +++ L
Sbjct: 244 LCGSITPEVWPNVDNYELYE-KLE---LVKGQKRKVKDRLKAYVRDPYALDLIDKLL-VL 298
Query: 417 KPLQNL 422
P Q +
Sbjct: 299 DPAQRI 304
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 125/306 (40%), Gaps = 50/306 (16%)
Query: 141 LGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-----WLAEVNFLGN 195
+G+G FG VFK + TG VA+K + ++ KE L E+ L
Sbjct: 26 IGQGTFGEVFKARHRK---------TGQKVALKKV---LMENEKEGFPITALREIKILQL 73
Query: 196 LLHPNLVKLVGYCIEDDQ--------RLLVYEFMPR---GSLENHLFRKGSLPLPWSIRM 244
L H N+V L+ C LV++F G L N L + + ++M
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM 133
Query: 245 KIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADYNAKLSDFGLAKD---APEDGKTH 301
+ GL ++H +++RD K +N+L+ D KL+DFGLA+ A
Sbjct: 134 LL-----NGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 185
Query: 302 VSTRVMGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEW 360
RV+ T Y PE ++ D++ G ++ EM T M N + L+
Sbjct: 186 YXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ 244
Query: 361 ----ARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEVVETL 416
P + Y L + +LE +KG ++ + + RDP A + +++ L
Sbjct: 245 LCGSITPEVWPNVDNYELYE-KLE---LVKGQKRKVKDRLKAYVRDPYALDLIDKLL-VL 299
Query: 417 KPLQNL 422
P Q +
Sbjct: 300 DPAQRI 305
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 111/287 (38%), Gaps = 59/287 (20%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW------LAEVNFL 193
LLG GGFG V+ G ++ L VA+K + D + E EV L
Sbjct: 15 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 194 GNLL--HPNLVKLVGYCIEDDQRLLVYEFM-PRGSLENHLFRKGSLPLPWSIRMKIALGA 250
+ +++L+ + D +L+ E M P L + + +G+L +
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQE--ELARSFFWQV 123
Query: 251 AKGLAFLHEEAEKPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDAPEDGKTHVSTRV 306
+ + H V++RD K NIL+D + KL DFG L KD V T
Sbjct: 124 LEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDF 173
Query: 307 MGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHL 365
GT Y+ PE++ +S V+S G++L +M+ G + + E R +
Sbjct: 174 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--------EIIRGQV 225
Query: 366 GDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
++R S + L CL+ P RP E+
Sbjct: 226 FFRQRV----------------SSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 23/209 (11%)
Query: 138 ESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLL 197
E+ +G G +G V V+ GT + A K + ++ + E+ + +L
Sbjct: 31 ENTIGRGSWGEV---------KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 81
Query: 198 HPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIR-MKIALGAAKGLAF 256
HPN+++L ++ LV E G L + K + R MK L A +A+
Sbjct: 82 HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSA---VAY 138
Query: 257 LHEEAEKPVIYRDFKTSNILL---DADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYA 313
H+ V +RD K N L D KL DFGLA + GK + T+V GT Y
Sbjct: 139 CHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF-KPGKM-MRTKV-GTPYYV 192
Query: 314 APEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
+P+ V+ G + D +S GV++ +L G
Sbjct: 193 SPQ-VLEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 23/209 (11%)
Query: 138 ESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGNLL 197
E+ +G G +G V V+ GT + A K + ++ + E+ + +L
Sbjct: 14 ENTIGRGSWGEV---------KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 64
Query: 198 HPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIR-MKIALGAAKGLAF 256
HPN+++L ++ LV E G L + K + R MK L A +A+
Sbjct: 65 HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSA---VAY 121
Query: 257 LHEEAEKPVIYRDFKTSNILL---DADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYA 313
H+ V +RD K N L D KL DFGLA + GK + T+V GT Y
Sbjct: 122 CHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF-KPGKM-MRTKV-GTPYYV 175
Query: 314 APEYVMTGHLTSKSDVYSFGVVLLEMLTG 342
+P+ V+ G + D +S GV++ +L G
Sbjct: 176 SPQ-VLEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 31/163 (19%)
Query: 252 KGLAFLHEEAEKPVIYRDFKTSNILLDADY---NAKLSDFGLAKDAPEDGKTHVSTRVMG 308
+G+ +LH+ +++ D K NILL + Y + K+ DFG+++ G +MG
Sbjct: 142 EGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI---GHACELREIMG 195
Query: 309 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDK 368
T Y APE + +T+ +D+++ G++ +LT P +G+
Sbjct: 196 TPEYLAPEILNYDPITTATDMWNIGIIAYMLLTH------------------TSPFVGED 237
Query: 369 RRFYRLLDPRLEGHFSIKG----SQKATQLAAQCLSRDPKARP 407
+ L ++ +S + SQ AT L ++P+ RP
Sbjct: 238 NQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRP 280
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 10/131 (7%)
Query: 215 LLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSN 274
L++ E M G L + + +G +I + FLH + +RD K N
Sbjct: 83 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPEN 139
Query: 275 ILL---DADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYS 331
+L + D KL+DFG AK+ ++ + T Y Y APE + D++S
Sbjct: 140 LLYTSKEKDAVLKLTDFGFAKETTQNA---LQTPCYTPY-YVAPEVLGPEKYDKSCDMWS 195
Query: 332 FGVVLLEMLTG 342
GV++ +L G
Sbjct: 196 LGVIMYILLCG 206
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 109/297 (36%), Gaps = 79/297 (26%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW------LAEVNFL 193
LLG GGFG V+ G ++ L VA+K + D + E EV L
Sbjct: 16 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 194 GNLL--HPNLVKLVGYCIEDDQRLLVYE-----------FMPRGSLENHLFRKGSLPLPW 240
+ +++L+ + D +L+ E RG+L+ L R W
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS----FFW 122
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDAPE 296
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 123 QVLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 169
Query: 297 DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 170 -----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----- 219
Query: 356 NLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
E R + ++R S + L CL+ P RP E+
Sbjct: 220 ---EIIRGQVFFRQRV----------------SSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 110/297 (37%), Gaps = 79/297 (26%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW------LAEVNFL 193
LLG GGFG V+ G ++ L VA+K + D + E EV L
Sbjct: 30 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 194 GNLL--HPNLVKLVGYCIEDDQRLLVYE-----------FMPRGSLENHLFRKGSLPLPW 240
+ +++L+ + D +L+ E RG+L+ L R +
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 140
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDAPE 296
++R G V++RD K NIL+D + KL DFG L KD
Sbjct: 141 AVRHCHNCG---------------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 183
Query: 297 DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 184 -----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----- 233
Query: 356 NLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
E R + ++R S + L CL+ P RP E+
Sbjct: 234 ---EIIRGQVFFRQRV----------------SSECQHLIRWCLALRPSDRPTFEEI 271
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 110/297 (37%), Gaps = 79/297 (26%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW------LAEVNFL 193
LLG GGFG V+ G ++ L VA+K + D + E EV L
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 194 GNLL--HPNLVKLVGYCIEDDQRLLVYE-----------FMPRGSLENHLFRKGSLPLPW 240
+ +++L+ + D +L+ E RG+L+ L R +
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 141
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDAPE 296
++R G V++RD K NIL+D + KL DFG L KD
Sbjct: 142 AVRHCHNCG---------------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 184
Query: 297 DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 185 -----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----- 234
Query: 356 NLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
E R + ++R S + L CL+ P RP E+
Sbjct: 235 ---EIIRGQVFFRQRV----------------SSECQHLIRWCLALRPSDRPTFEEI 272
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 10/131 (7%)
Query: 215 LLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSN 274
L++ E M G L + + +G +I + FLH + +RD K N
Sbjct: 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPEN 158
Query: 275 ILL---DADYNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYS 331
+L + D KL+DFG AK+ ++ + T Y Y APE + D++S
Sbjct: 159 LLYTSKEKDAVLKLTDFGFAKETTQNA---LQTPCYTPY-YVAPEVLGPEKYDKSCDMWS 214
Query: 332 FGVVLLEMLTG 342
GV++ +L G
Sbjct: 215 LGVIMYILLCG 225
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 110/297 (37%), Gaps = 79/297 (26%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW------LAEVNFL 193
LLG GGFG V+ G ++ L VA+K + D + E EV L
Sbjct: 16 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 194 GNLL--HPNLVKLVGYCIEDDQRLLVYE-----------FMPRGSLENHLFRKGSLPLPW 240
+ +++L+ + D +L+ E RG+L+ L R +
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDAPE 296
++R G V++RD K NIL+D + KL DFG L KD
Sbjct: 127 AVRHCHNCG---------------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 169
Query: 297 DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 170 -----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----- 219
Query: 356 NLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
E R + ++R S + L CL+ P RP E+
Sbjct: 220 ---EIIRGQVFFRQRV----------------SSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 110/297 (37%), Gaps = 79/297 (26%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW------LAEVNFL 193
LLG GGFG V+ G ++ L VA+K + D + E EV L
Sbjct: 30 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 194 GNLL--HPNLVKLVGYCIEDDQRLLVYE-----------FMPRGSLENHLFRKGSLPLPW 240
+ +++L+ + D +L+ E RG+L+ L R +
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 140
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDAPE 296
++R G V++RD K NIL+D + KL DFG L KD
Sbjct: 141 AVRHCHNCG---------------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 183
Query: 297 DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 184 -----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----- 233
Query: 356 NLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
E R + ++R S + L CL+ P RP E+
Sbjct: 234 ---EIIRGQVFFRQRV----------------SXECQHLIRWCLALRPSDRPTFEEI 271
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 110/297 (37%), Gaps = 79/297 (26%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW------LAEVNFL 193
LLG GGFG V+ G ++ L VA+K + D + E EV L
Sbjct: 15 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 194 GNLL--HPNLVKLVGYCIEDDQRLLVYE-----------FMPRGSLENHLFRKGSLPLPW 240
+ +++L+ + D +L+ E RG+L+ L R +
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 125
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDAPE 296
++R G V++RD K NIL+D + KL DFG L KD
Sbjct: 126 AVRHCHNCG---------------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 168
Query: 297 DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 169 -----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----- 218
Query: 356 NLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
E R + ++R S + L CL+ P RP E+
Sbjct: 219 ---EIIRGQVFFRQRV----------------SSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 19/169 (11%)
Query: 189 EVNFLGNLLHPNLVKL--VGYCIEDDQRLLVYEFMPRGSLENHLFRKGS------LPLPW 240
E+ L L HPN++ L V D + L++++ F + S + LP
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPR 127
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADY----NAKLSDFGLAK--DA 294
+ + G+ +LH V++RD K +NIL+ + K++D G A+ ++
Sbjct: 128 GMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 184
Query: 295 PEDGKTHVSTRVMGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEMLTG 342
P + V+ T+ Y APE ++ H T D+++ G + E+LT
Sbjct: 185 PLKPLADLDP-VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 109/297 (36%), Gaps = 79/297 (26%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW------LAEVNFL 193
LLG GGFG V+ G ++ L VA+K + D + E EV L
Sbjct: 50 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 100
Query: 194 GNLL--HPNLVKLVGYCIEDDQRLLVYE-----------FMPRGSLENHLFRKGSLPLPW 240
+ +++L+ + D +L+ E RG+L+ L R W
Sbjct: 101 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS----FFW 156
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDAPE 296
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 157 QVLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 203
Query: 297 DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 204 -----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----- 253
Query: 356 NLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
E R + ++R S + L CL+ P RP E+
Sbjct: 254 ---EIIRGQVFFRQRV----------------SSECQHLIRWCLALRPSDRPTFEEI 291
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 109/297 (36%), Gaps = 79/297 (26%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW------LAEVNFL 193
LLG GGFG V+ G ++ L VA+K + D + E EV L
Sbjct: 16 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 194 GNLL--HPNLVKLVGYCIEDDQRLLVYE-----------FMPRGSLENHLFRKGSLPLPW 240
+ +++L+ + D +L+ E RG+L+ L R W
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS----FFW 122
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDAPE 296
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 123 QVLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 169
Query: 297 DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 170 -----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----- 219
Query: 356 NLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
E R + ++R S + L CL+ P RP E+
Sbjct: 220 ---EIIRGQVFFRQRV----------------SSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 20/145 (13%)
Query: 212 DQRLLVYEFMPRGSLENHLFRKGSL-PLPWSIRMKIALGAAKGLAFLHEEAEKPVIYRDF 270
D+ LV+E M GS+ +H+ ++ L S+ + A L FLH K + +RD
Sbjct: 84 DRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLH---NKGIAHRDL 137
Query: 271 KTSNILLDADYN---AKLSDFGLAKDAPEDGKTH-VSTRVM----GTYGYAAPEYV---- 318
K NIL + K+ DFGL +G +ST + G+ Y APE V
Sbjct: 138 KPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197
Query: 319 -MTGHLTSKSDVYSFGVVLLEMLTG 342
+ D++S GV+L +L+G
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLSG 222
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 109/297 (36%), Gaps = 79/297 (26%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW------LAEVNFL 193
LLG GGFG V+ G ++ L VA+K + D + E EV L
Sbjct: 11 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 194 GNLL--HPNLVKLVGYCIEDDQRLLVYE-----------FMPRGSLENHLFRKGSLPLPW 240
+ +++L+ + D +L+ E RG+L+ L R W
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS----FFW 117
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDAPE 296
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 118 QVLEAVRHCHNXG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 164
Query: 297 DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 165 -----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----- 214
Query: 356 NLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
E R + ++R S + L CL+ P RP E+
Sbjct: 215 ---EIIRGQVFFRQRV----------------SXECQHLIRWCLALRPSDRPTFEEI 252
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 110/297 (37%), Gaps = 79/297 (26%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW------LAEVNFL 193
LLG GGFG V+ G ++ L VA+K + D + E EV L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 194 GNLL--HPNLVKLVGYCIEDDQRLLVYE-----------FMPRGSLENHLFRKGSLPLPW 240
+ +++L+ + D +L+ E RG+L+ L R +
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDAPE 296
++R G V++RD K NIL+D + KL DFG L KD
Sbjct: 154 AVRHCHNCG---------------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 196
Query: 297 DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 197 -----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----- 246
Query: 356 NLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
E R + ++R S + L CL+ P RP E+
Sbjct: 247 ---EIIRGQVFFRQRV----------------SSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 110/297 (37%), Gaps = 79/297 (26%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW------LAEVNFL 193
LLG GGFG V+ G ++ L VA+K + D + E EV L
Sbjct: 14 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 64
Query: 194 GNLL--HPNLVKLVGYCIEDDQRLLVYE-----------FMPRGSLENHLFRKGSLPLPW 240
+ +++L+ + D +L+ E RG+L+ L R +
Sbjct: 65 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 124
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDAPE 296
++R G V++RD K NIL+D + KL DFG L KD
Sbjct: 125 AVRHCHNCG---------------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 167
Query: 297 DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 168 -----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----- 217
Query: 356 NLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
E R + ++R S + L CL+ P RP E+
Sbjct: 218 ---EIIRGQVFFRQRV----------------SSECQHLIRWCLALRPSDRPTFEEI 255
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 110/297 (37%), Gaps = 79/297 (26%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW------LAEVNFL 193
LLG GGFG V+ G ++ L VA+K + D + E EV L
Sbjct: 58 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 194 GNLL--HPNLVKLVGYCIEDDQRLLVYE-----------FMPRGSLENHLFRKGSLPLPW 240
+ +++L+ + D +L+ E RG+L+ L R +
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 168
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDAPE 296
++R G V++RD K NIL+D + KL DFG L KD
Sbjct: 169 AVRHCHNCG---------------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 211
Query: 297 DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 212 -----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----- 261
Query: 356 NLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
E R + ++R S + L CL+ P RP E+
Sbjct: 262 ---EIIRGQVFFRQRV----------------SSECQHLIRWCLALRPSDRPTFEEI 299
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 110/297 (37%), Gaps = 79/297 (26%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW------LAEVNFL 193
LLG GGFG V+ G ++ L VA+K + D + E EV L
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 194 GNLL--HPNLVKLVGYCIEDDQRLLVYE-----------FMPRGSLENHLFRKGSLPLPW 240
+ +++L+ + D +L+ E RG+L+ L R +
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 141
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDAPE 296
++R G V++RD K NIL+D + KL DFG L KD
Sbjct: 142 AVRHCHNCG---------------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 184
Query: 297 DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 185 -----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----- 234
Query: 356 NLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
E R + ++R S + L CL+ P RP E+
Sbjct: 235 ---EIIRGQVFFRQRV----------------SXECQHLIRWCLALRPSDRPTFEEI 272
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 110/297 (37%), Gaps = 79/297 (26%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW------LAEVNFL 193
LLG GGFG V+ G ++ L VA+K + D + E EV L
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 194 GNLL--HPNLVKLVGYCIEDDQRLLVYE-----------FMPRGSLENHLFRKGSLPLPW 240
+ +++L+ + D +L+ E RG+L+ L R +
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 141
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDAPE 296
++R G V++RD K NIL+D + KL DFG L KD
Sbjct: 142 AVRHCHNCG---------------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 184
Query: 297 DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 185 -----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----- 234
Query: 356 NLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
E R + ++R S + L CL+ P RP E+
Sbjct: 235 ---EIIRGQVFFRQRV----------------SXECQHLIRWCLALRPXDRPTFEEI 272
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 110/297 (37%), Gaps = 79/297 (26%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW------LAEVNFL 193
LLG GGFG V+ G ++ L VA+K + D + E EV L
Sbjct: 63 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 113
Query: 194 GNLL--HPNLVKLVGYCIEDDQRLLVYE-----------FMPRGSLENHLFRKGSLPLPW 240
+ +++L+ + D +L+ E RG+L+ L R +
Sbjct: 114 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 173
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDAPE 296
++R G V++RD K NIL+D + KL DFG L KD
Sbjct: 174 AVRHCHNCG---------------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 216
Query: 297 DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 217 -----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----- 266
Query: 356 NLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
E R + ++R S + L CL+ P RP E+
Sbjct: 267 ---EIIRGQVFFRQRV----------------SXECQHLIRWCLALRPSDRPTFEEI 304
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 109/297 (36%), Gaps = 79/297 (26%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW------LAEVNFL 193
LLG GGFG V+ G ++ L VA+K + D + E EV L
Sbjct: 38 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 88
Query: 194 GNLL--HPNLVKLVGYCIEDDQRLLVYE-----------FMPRGSLENHLFRKGSLPLPW 240
+ +++L+ + D +L+ E RG+L+ L R W
Sbjct: 89 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS----FFW 144
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDAPE 296
+ + G V++RD K NIL+D + KL DFG L KD
Sbjct: 145 QVLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 191
Query: 297 DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 192 -----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----- 241
Query: 356 NLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
E R + ++R S + L CL+ P RP E+
Sbjct: 242 ---EIIRGQVFFRQRV----------------SXECQHLIRWCLALRPSDRPTFEEI 279
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 110/297 (37%), Gaps = 79/297 (26%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW------LAEVNFL 193
LLG GGFG V+ G ++ L VA+K + D + E EV L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 194 GNLL--HPNLVKLVGYCIEDDQRLLVYE-----------FMPRGSLENHLFRKGSLPLPW 240
+ +++L+ + D +L+ E RG+L+ L R +
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDAPE 296
++R G V++RD K NIL+D + KL DFG L KD
Sbjct: 154 AVRHCHNCG---------------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 196
Query: 297 DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 197 -----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----- 246
Query: 356 NLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
+ + F+R + S + L CL+ P RP E+
Sbjct: 247 --------EIIGGQVFFRQ-----------RVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 110/297 (37%), Gaps = 79/297 (26%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW------LAEVNFL 193
LLG GGFG V+ G ++ L VA+K + D + E EV L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 194 GNLL--HPNLVKLVGYCIEDDQRLLVYE-----------FMPRGSLENHLFRKGSLPLPW 240
+ +++L+ + D +L+ E RG+L+ L R +
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDAPE 296
++R G V++RD K NIL+D + KL DFG L KD
Sbjct: 154 AVRHCHNCG---------------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 196
Query: 297 DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 197 -----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----- 246
Query: 356 NLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
+ + F+R + S + L CL+ P RP E+
Sbjct: 247 --------EIIGGQVFFRQ-----------RVSXECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 110/297 (37%), Gaps = 79/297 (26%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW------LAEVNFL 193
LLG GGFG V+ G ++ L VA+K + D + E EV L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 194 GNLL--HPNLVKLVGYCIEDDQRLLVYE-----------FMPRGSLENHLFRKGSLPLPW 240
+ +++L+ + D +L+ E RG+L+ L R +
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDAPE 296
++R G V++RD K NIL+D + KL DFG L KD
Sbjct: 155 AVRHCHNCG---------------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 197
Query: 297 DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 198 -----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----- 247
Query: 356 NLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
+ + F+R + S + L CL+ P RP E+
Sbjct: 248 --------EIIGGQVFFRQ-----------RVSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 110/297 (37%), Gaps = 79/297 (26%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW------LAEVNFL 193
LLG GGFG V+ G ++ L VA+K + D + E EV L
Sbjct: 58 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 194 GNLL--HPNLVKLVGYCIEDDQRLLVYE-----------FMPRGSLENHLFRKGSLPLPW 240
+ +++L+ + D +L+ E RG+L+ L R +
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 168
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDAPE 296
++R G V++RD K NIL+D + KL DFG L KD
Sbjct: 169 AVRHCHNCG---------------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 211
Query: 297 DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 212 -----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----- 261
Query: 356 NLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
E R + ++R S + L CL+ P RP E+
Sbjct: 262 ---EIIRGQVFFRQRV----------------SXECQHLIRWCLALRPSDRPTFEEI 299
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 110/297 (37%), Gaps = 79/297 (26%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW------LAEVNFL 193
LLG GGFG V+ G ++ L VA+K + D + E EV L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 194 GNLL--HPNLVKLVGYCIEDDQRLLVYE-----------FMPRGSLENHLFRKGSLPLPW 240
+ +++L+ + D +L+ E RG+L+ L R +
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDAPE 296
++R G V++RD K NIL+D + KL DFG L KD
Sbjct: 154 AVRHCHNCG---------------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 196
Query: 297 DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 197 -----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----- 246
Query: 356 NLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
+ + F+R + S + L CL+ P RP E+
Sbjct: 247 --------EIIGGQVFFRQ-----------RVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 110/297 (37%), Gaps = 79/297 (26%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW------LAEVNFL 193
LLG GGFG V+ G ++ L VA+K + D + E EV L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 194 GNLL--HPNLVKLVGYCIEDDQRLLVYE-----------FMPRGSLENHLFRKGSLPLPW 240
+ +++L+ + D +L+ E RG+L+ L R +
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDAPE 296
++R G V++RD K NIL+D + KL DFG L KD
Sbjct: 155 AVRHCHNCG---------------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 197
Query: 297 DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 198 -----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----- 247
Query: 356 NLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
+ + F+R + S + L CL+ P RP E+
Sbjct: 248 --------EIIGGQVFFRQ-----------RVSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 110/297 (37%), Gaps = 79/297 (26%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW------LAEVNFL 193
LLG GGFG V+ G ++ L VA+K + D + E EV L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 194 GNLL--HPNLVKLVGYCIEDDQRLLVYE-----------FMPRGSLENHLFRKGSLPLPW 240
+ +++L+ + D +L+ E RG+L+ L R +
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDAPE 296
++R G V++RD K NIL+D + KL DFG L KD
Sbjct: 155 AVRHCHNCG---------------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 197
Query: 297 DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 198 -----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----- 247
Query: 356 NLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
+ + F+R + S + L CL+ P RP E+
Sbjct: 248 --------EIIGGQVFFRQ-----------RVSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 91/227 (40%), Gaps = 55/227 (24%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW------LAEVNFL 193
LLG GGFG V+ G ++ L VA+K + D + E EV L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 194 GNLL--HPNLVKLVGYCIEDDQRLLVYE-----------FMPRGSLENHLFRKGSLPLPW 240
+ +++L+ + D +L+ E RG+L+ L R +
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDAPE 296
++R G V++RD K NIL+D + KL DFG L KD
Sbjct: 155 AVRHCHNCG---------------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 197
Query: 297 DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTG 342
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 198 -----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 110/297 (37%), Gaps = 79/297 (26%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW------LAEVNFL 193
LLG GGFG V+ G ++ L VA+K + D + E EV L
Sbjct: 11 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 194 GNLL--HPNLVKLVGYCIEDDQRLLVYE-----------FMPRGSLENHLFRKGSLPLPW 240
+ +++L+ + D +L+ E RG+L+ L R +
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDAPE 296
++R G V++RD K NIL+D + KL DFG L KD
Sbjct: 122 AVRHCHNCG---------------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 164
Query: 297 DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 165 -----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----- 214
Query: 356 NLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
E R + ++R S + L CL+ P RP E+
Sbjct: 215 ---EIIRGQVFFRQRV----------------SSECQHLIRWCLALRPSDRPTFEEI 252
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 85/220 (38%), Gaps = 36/220 (16%)
Query: 198 HPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFL 257
HPN++ L + +V E G L + + R+ + + K + +L
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREA--SAVLFTITKTVEYL 132
Query: 258 HEEAEKPVIYRDFKTSNIL-LDADYN---AKLSDFGLAKDA-PEDGKTHVSTRVMGTYGY 312
H + V++RD K SNIL +D N ++ DFG AK E+G T +
Sbjct: 133 HAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY---TANF 186
Query: 313 AAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGDKRRFY 372
APE + + D++S GV+L LTG NG + E +G
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF----ANGPDDTPEEILARIG------ 236
Query: 373 RLLDPRLEGHFSIKG------SQKATQLAAQCLSRDPKAR 406
G FS+ G S A L ++ L DP R
Sbjct: 237 -------SGKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQR 269
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 85/222 (38%), Gaps = 25/222 (11%)
Query: 195 NLLHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGL 254
+L HPN+V+ + ++ E+ G L + G + L G+
Sbjct: 72 SLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQL--LSGV 129
Query: 255 AFLHEEAEKPVIYRDFKTSNILLDAD--YNAKLSDFGLAKDAPEDGKTHVSTRVMGTYGY 312
++ H + +RD K N LLD K+ DFG +K + + + +GT Y
Sbjct: 130 SYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAY 183
Query: 313 AAPEYVMTGHLTSK-SDVYSFGVVLLEMLTGRRSM-DKNRPNGEHNLVEWARPHLGDKRR 370
APE ++ K +DV+S GV L ML G D P ++
Sbjct: 184 IAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQ----------- 232
Query: 371 FYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
R+L + I+ S + L ++ DP R + E+
Sbjct: 233 --RILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEI 272
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 110/297 (37%), Gaps = 79/297 (26%)
Query: 140 LLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW------LAEVNFL 193
LLG GGFG V+ G ++ L VA+K + D + E EV L
Sbjct: 11 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 194 GNLL--HPNLVKLVGYCIEDDQRLLVYE-----------FMPRGSLENHLFRKGSLPLPW 240
+ +++L+ + D +L+ E RG+L+ L R +
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 241 SIRMKIALGAAKGLAFLHEEAEKPVIYRDFKTSNILLDADY-NAKLSDFG---LAKDAPE 296
++R G V++RD K NIL+D + KL DFG L KD
Sbjct: 122 AVRHCHNCG---------------VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 164
Query: 297 DGKTHVSTRVMGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEH 355
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 165 -----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----- 214
Query: 356 NLVEWARPHLGDKRRFYRLLDPRLEGHFSIKGSQKATQLAAQCLSRDPKARPRMSEV 412
+ + F+R + S + L CL+ P RP E+
Sbjct: 215 --------EIIGGQVFFRQ-----------RVSSECQHLIRWCLALRPSDRPTFEEI 252
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,334,709
Number of Sequences: 62578
Number of extensions: 596006
Number of successful extensions: 4038
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 227
Number of HSP's that attempted gapping in prelim test: 1414
Number of HSP's gapped (non-prelim): 1155
length of query: 491
length of database: 14,973,337
effective HSP length: 103
effective length of query: 388
effective length of database: 8,527,803
effective search space: 3308787564
effective search space used: 3308787564
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)