BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011182
(491 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359479082|ref|XP_002272646.2| PREDICTED: uncharacterized protein LOC100259916 [Vitis vinifera]
Length = 481
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 274/513 (53%), Positives = 329/513 (64%), Gaps = 54/513 (10%)
Query: 1 MATRQKLKGKLYHEENGEEEEKLKSAAAMSS-DDEEGNEDLSLKIVEKHMLMRAAKLDQD 59
M RQK K K+ H+E+ E +S +SS DDEE NEDLSLKIVEK M RA+K D +
Sbjct: 1 MGRRQKPKAKIDHQEDEEGANSSRSVIYLSSSDDEEANEDLSLKIVEKAM-KRASKTDHN 59
Query: 60 DSDSDVVLNDNTNTNTSDNSNNKNGGVEAVVPGPSGTTDDVIIEDVKSSDKKRIRVRKKK 119
D+ VL + +S ++ V GP+ T DD ++ K +K R K
Sbjct: 60 DA----VLAGRSAVIDLGSSPSEEAEVITDRSGPT-TDDDAEVKSKKKKSRKEKRANKN- 113
Query: 120 KKEADKIEIEDQSVIVRKEEQKVETADNGDEGVTTVEI-----SDNIVLRKLLRGPRYFD 174
IE ++++ + EE+K E+ D E + VE SDNIVLRKLLRGPRYFD
Sbjct: 114 ------IENQEKTDEILMEEKKGES-DKALEILKMVEPYPVEGSDNIVLRKLLRGPRYFD 166
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHR 234
PPD GW CYNCGEEGH AVNC ++VKRKKPCFVCGSLEH +QC K QDCFICKKGGHR
Sbjct: 167 PPDSGWGACYNCGEEGHNAVNC-ASVKRKKPCFVCGSLEHNAKQCMKGQDCFICKKGGHR 225
Query: 235 AKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNIS 294
AKDCP+KH+SG QN+++CLKCGDS HDMFSCRN YS +DLKE+QCYIC+ FGHLCC+N
Sbjct: 226 AKDCPEKHRSGSQNSKICLKCGDSRHDMFSCRNDYSPEDLKEIQCYICKSFGHLCCINYV 285
Query: 295 DAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEA-SPSSCYNCGAEGHFARECVS 353
D P E SC++CGQLGHTGL ACAR ET + +PSSCY CG +GHF
Sbjct: 286 DTGPIEPSCYKCGQLGHTGL-------ACARLNAETADVQTPSSCYRCGEQGHF------ 332
Query: 354 SSKVRKRNIDASTPTFRPHRENKDHSGIKSAPHDLGKVHKRKKTQHEERGIMTSRKSKQR 413
V KR + ST + R +E+KD G KSAP DLG KRKK +EERG +T RK KQR
Sbjct: 333 ---VSKRYSEVSTQSRRFLKEDKDKLGFKSAPKDLGMGRKRKKPWYEERGNITPRKPKQR 389
Query: 414 GGWITDDPGDISYGKPKRNHWRSPGTPSSKAHKISAITSGGHFSSPQSS------IKRN- 466
GGWIT+DPGD K K WRSP TP++K HK +T+ GH++S QSS RN
Sbjct: 390 GGWITEDPGDSPQRKAKVKSWRSPATPTNKNHKRPMLTA-GHYTSSQSSKNTQKFYSRNS 448
Query: 467 --------SHHRFSASRFDSSGSDGIRRGYDWW 491
S HRFSASRF SS SD +RR YDWW
Sbjct: 449 TWQGSAKASQHRFSASRFGSSSSDAVRRHYDWW 481
>gi|255573261|ref|XP_002527559.1| cellular nucleic acid binding protein, putative [Ricinus communis]
gi|223533051|gb|EEF34811.1| cellular nucleic acid binding protein, putative [Ricinus communis]
Length = 497
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 258/516 (50%), Positives = 329/516 (63%), Gaps = 44/516 (8%)
Query: 1 MATRQKLKGKLYHEENGEEEEKLKSAAAMSSDDEEGNEDLSLKIVEKHMLMRAAKLDQDD 60
MA +K KGK +E EEE+ + ++ DD E NEDLSLKIVEK +LMRAAKL Q+D
Sbjct: 1 MAKEEKRKGKFDDKE--EEEKAVIELSSGDEDDNEANEDLSLKIVEKALLMRAAKLAQND 58
Query: 61 SDSDVVLNDNTNTNTSDNSNNKNGGVEAVVPGPSGTTDDVIIEDVKSSDKKRIRVRKKKK 120
++ VVL+D+ + N + + GV V G V+ E K KK+I+ ++ +
Sbjct: 59 NEI-VVLDDDDDDEDDYNVSKNDSGVVGVSSGRDEAESVVVKEVKKKKKKKKIQKKEIEN 117
Query: 121 KEADKIEIEDQSVIVRKEEQKVETADNG--DEGVTT--VEISDNIVLRKLLRGPRYFDPP 176
+ + + E+ + K + VE + G DE V + VE++ N+VLRKLLRGPRYFD P
Sbjct: 118 QYVETVAKEEDRETIEKIVEVVENGEAGQLDENVDSHAVEVAQNMVLRKLLRGPRYFDSP 177
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAK 236
D GW TC+NCG+EGHMAVNC S K++KPCF+CG L+HGV+QCSK + C ICK GHR
Sbjct: 178 DSGWSTCFNCGKEGHMAVNCPSFEKKRKPCFLCGGLDHGVKQCSKERLCIICKSVGHRPN 237
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDA 296
CP+KHK G Q+++VCLKCGDSGHDMFSCRNSY LDDLKE+QCYIC+ GHLCCVN D
Sbjct: 238 RCPEKHKGGPQSSKVCLKCGDSGHDMFSCRNSYPLDDLKEIQCYICKNGGHLCCVNFVDN 297
Query: 297 VPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASP-SSCYNCGAEGHFARECVSSS 355
P EVSC++CG+LGHTG C+ E +P SSC+ CG EGHFA
Sbjct: 298 SPREVSCYKCGELGHTG-------SECSSLHDEATTTAPSSSCFRCGEEGHFA------- 343
Query: 356 KVRKRNIDASTPTFRPHRENKDHSGIKSAPHDLGKVHKRKKTQHEERGIMTSRKSKQRGG 415
+RN + STPT RPHRENK+ G KSAP DLGK K++K++ ER T +KSKQRGG
Sbjct: 344 --GRRNHEQSTPTLRPHRENKEALGYKSAPQDLGKSRKKRKSKSGERSNTTPKKSKQRGG 401
Query: 416 WITDDP-GDISYGKPKRNHWRSPGTPSSKAHKISAITSGGH---FSSPQSSIKRNS---- 467
W+T+DP GD S K K+NHWRSP S + HKIS T+GGH SSP RN+
Sbjct: 402 WLTEDPTGDFSQSKFKKNHWRSPSKLSYQGHKISTGTTGGHPGMSSSPSYKKMRNNHWGP 461
Query: 468 ----------HHRFSASRFDSSGSDGIRRGYD--WW 491
H R+SASRF +S + G RR Y+ W+
Sbjct: 462 SQLQGSASPFHQRYSASRFSNSSNAGFRRNYNDRWY 497
>gi|296084007|emb|CBI24395.3| unnamed protein product [Vitis vinifera]
Length = 441
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/387 (60%), Positives = 275/387 (71%), Gaps = 31/387 (8%)
Query: 126 IEIEDQSVIVRKEEQKVETADNGDEGVTTVEI-----SDNIVLRKLLRGPRYFDPPDRGW 180
IE ++++ + EE+K E+ D E + VE SDNIVLRKLLRGPRYFDPPD GW
Sbjct: 65 IENQEKTDEILMEEKKGES-DKALEILKMVEPYPVEGSDNIVLRKLLRGPRYFDPPDSGW 123
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
CYNCGEEGH AVNC ++VKRKKPCFVCGSLEH +QC K QDCFICKKGGHRAKDCP+
Sbjct: 124 GACYNCGEEGHNAVNC-ASVKRKKPCFVCGSLEHNAKQCMKGQDCFICKKGGHRAKDCPE 182
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGE 300
KH+SG QN+++CLKCGDS HDMFSCRN YS +DLKE+QCYIC+ FGHLCC+N D P E
Sbjct: 183 KHRSGSQNSKICLKCGDSRHDMFSCRNDYSPEDLKEIQCYICKSFGHLCCINYVDTGPIE 242
Query: 301 VSCFRCGQLGHTGLHWNSCMQACARSRGETVEA-SPSSCYNCGAEGHFARECVSSSKVRK 359
SC++CGQLGHTGL ACAR ET + +PSSCY CG +GHFAREC SS+KV K
Sbjct: 243 PSCYKCGQLGHTGL-------ACARLNAETADVQTPSSCYRCGEQGHFARECKSSTKVSK 295
Query: 360 RNIDASTPTFRPHRENKDHSGIKSAPHDLGKVHKRKKTQHEERGIMTSRKSKQRGGWITD 419
R + ST + R +E+KD G KSAP DLG KRKK +EERG +T RK KQRGGWIT+
Sbjct: 296 RYSEVSTQSRRFLKEDKDKLGFKSAPKDLGMGRKRKKPWYEERGNITPRKPKQRGGWITE 355
Query: 420 DPGDISYGKPKRNHWRSPGTPSSKAHKISAITSGGHFSSPQSS------IKRN------- 466
DPGD K K WRSP TP++K HK +T+ GH++S QSS RN
Sbjct: 356 DPGDSPQRKAKVKSWRSPATPTNKNHKRPMLTA-GHYTSSQSSKNTQKFYSRNSTWQGSA 414
Query: 467 --SHHRFSASRFDSSGSDGIRRGYDWW 491
S HRFSASRF SS SD +RR YDWW
Sbjct: 415 KASQHRFSASRFGSSSSDAVRRHYDWW 441
>gi|224132214|ref|XP_002328213.1| predicted protein [Populus trichocarpa]
gi|222837728|gb|EEE76093.1| predicted protein [Populus trichocarpa]
Length = 683
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 249/527 (47%), Positives = 317/527 (60%), Gaps = 76/527 (14%)
Query: 1 MATRQKLKGKLYHEENGEEEEKLKSAAAMSSDDEEGNEDLSLKIVEKHMLMRAAKLDQDD 60
M T++K K K+ E EE++ K +SSDDEE NEDLSLKIVEK +LM+AAKL +
Sbjct: 1 METKEKQKTKIEVIEEEEEKQSEKFVVEVSSDDEEANEDLSLKIVEKSLLMKAAKLTAN- 59
Query: 61 SDSDVVLNDNTNTNTSDNSNNKNGGVEAVVP----------GPSG-------TTDDVIIE 103
+ +VL+D+ + + S G VE GPSG + I
Sbjct: 60 GNCLIVLDDDDDDDGSGGDGGDTGVVEVAATSSMEAVAAGVGPSGGKKRKKKVEKRINIS 119
Query: 104 DVKSSDKKRIRVRKKKK--KEADKIEIEDQSVIVRKEEQKVETADNGDEGVTTVEISDNI 161
V + ++ ++ ++ + + ++ IE S V E E ++G G T E S N+
Sbjct: 120 AVNAKEEGKVGTAEEAETVENSETIEKAGTSETVEAVEA-AELVESG--GATADEESVNV 176
Query: 162 VLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK 221
VLRKLLRGPRYFDPPD GW TCYNCGEEGHMAVNC + +K+ KPCFVCGSLEHG +QCSK
Sbjct: 177 VLRKLLRGPRYFDPPDSGWSTCYNCGEEGHMAVNCPTPMKKIKPCFVCGSLEHGAKQCSK 236
Query: 222 AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYI 281
+DCFICKK GHRAK+CPDK+ + Q++++CL CG+SGH+MFSC+ YS +DLKE+QCYI
Sbjct: 237 GRDCFICKKSGHRAKNCPDKYNATPQSSKICLNCGESGHEMFSCKKDYSPNDLKEIQCYI 296
Query: 282 CRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGE-TVEASPSSCYN 340
C+ FGHLCCV D +VSC+RCG+LGH+GL C R E T+ SPS CY
Sbjct: 297 CKSFGHLCCVTSGDDSLRQVSCYRCGELGHSGLE-------CGRLNEEATMAESPSLCYR 349
Query: 341 CGAEGHFARECVSSSKVRKRNIDASTPTFRPHRENKDHSGIKSAPHDLGKVHKR------ 394
CG GHFAREC S+K KR+ + STPT + HREN GIKSAPHDLGK K+
Sbjct: 350 CGEGGHFARECTRSAKGGKRSRELSTPTLKSHRENNKSMGIKSAPHDLGKSRKKRKTKSK 409
Query: 395 --------KKTQHEERGIM---------TSRKSKQRGGWITDDPGDI------------- 424
+K++H+ R I T +KSK RGGWITDDPGDI
Sbjct: 410 EKGNDASLQKSKHKGRRIAEDQGNLSQSTPKKSKHRGGWITDDPGDIFKSTPTKSKHKGG 469
Query: 425 ---------SYGKPKRNHWRSPGTPSSKAHKISAITSGGHFSSPQSS 462
S K K+NH++SP TPS K HKIS +TSG H S Q+S
Sbjct: 470 WISEDPGDASQSKYKKNHFKSPSTPSYKGHKISPMTSGHHMSGSQTS 516
>gi|356547869|ref|XP_003542327.1| PREDICTED: uncharacterized protein LOC100780476 [Glycine max]
Length = 529
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 247/561 (44%), Positives = 316/561 (56%), Gaps = 102/561 (18%)
Query: 1 MATRQKLKGKLYHEENGEEEEKLKSAAAM--SSDDEEGNEDLSLKIVEKHMLMRAAKLDQ 58
M ++K K EE ++ S + SSDD+E N+DLSLKI++K M MR AK
Sbjct: 1 MGRKEKQNTKAIEEERDQDNFNGASTPPLVFSSDDDEANQDLSLKIIKKAMRMRTAKHAP 60
Query: 59 DDSDSDVVLNDNTNTNTSDNSNNKNGGVEAVVPGPSGTTDDVIIEDVKSSDKKRIRVRKK 118
+D S + D + +GGV GPS D ++E K
Sbjct: 61 NDDVSSPF------SQKPDLALPPSGGVSD---GPSAIADSEVME--------------K 97
Query: 119 KKKEADKIEIEDQSVIVRKEEQKVETADNGDEGVT-TVEISDNIVLRKLLRGPRYFDPPD 177
KK K+E DQSV++ +E++ ET + + V EI DN+VLRKLLRGPRYFDPPD
Sbjct: 98 KKTAKLKVEAGDQSVVIAEEQEMEETINATENHVEGRPEIGDNMVLRKLLRGPRYFDPPD 157
Query: 178 RGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKD 237
W C+NCGEEGH AVNC SAVKRKKPC+VCG L H RQCSK QDCFICKKGGHRAKD
Sbjct: 158 NSWGACFNCGEEGHAAVNC-SAVKRKKPCYVCGCLGHNARQCSKVQDCFICKKGGHRAKD 216
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAV 297
CP+KH S ++ +CLKCG+SGHD+FSCRN YS DDLKE+QCY+C+ GHLCCVN DA
Sbjct: 217 CPEKHTSTSKSIAICLKCGNSGHDIFSCRNDYSQDDLKEIQCYVCKRLGHLCCVNTDDAT 276
Query: 298 PGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVE-ASPSSCYNCGAEGHFARECVSS-- 354
GE+SC++CGQLGH GL AC R + E A+PSSC+ CG EGHFAREC SS
Sbjct: 277 AGEISCYKCGQLGHMGL-------ACLRLQDEIASGATPSSCFKCGEEGHFARECTSSIN 329
Query: 355 --SKVRKRNIDAS-TPTFRPHRENKDHSGIKSAPHDLGKVHKRKKTQHEERGIMTSRKSK 411
+ K N ++S T R +EN+ + G +SAP+D+ ++K++ EERG T +KSK
Sbjct: 330 FPPQSGKGNWESSRTKDKRSQKENR-YMGNRSAPNDISGARRKKRSPTEERGFSTPKKSK 388
Query: 412 QRGGWITDDPG------------------------DISYGKPKRNH-------------- 433
RGGW+ + P Y PK++
Sbjct: 389 SRGGWMAEYPTKERGFTTPKKSKSRGGCTTEHPSEQQDYATPKKSKSRGGWTSEHPEEFF 448
Query: 434 ---------WRSPGTPSSKAHKISAITSGGHFSSPQSS--------------IKRNSHHR 470
+RSPGTPSS+ +I + G H S +SS R++HHR
Sbjct: 449 PPLSSRSKGYRSPGTPSSRNDRIHSFGGGSHTPSYKSSKVWNGHTGTSMSQGSARSNHHR 508
Query: 471 FSASRFDSSGSDGIRRGYDWW 491
+SASRF +S SDG R Y+WW
Sbjct: 509 YSASRFGNSSSDGHGRNYNWW 529
>gi|356574813|ref|XP_003555539.1| PREDICTED: uncharacterized protein LOC100794448 [Glycine max]
Length = 533
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 257/569 (45%), Positives = 318/569 (55%), Gaps = 114/569 (20%)
Query: 1 MATRQKLKGKLYHEE------NGEEEEKLKSAAAMSSDDEEGNEDLSLKIVEKHMLMRAA 54
M ++K K EE NG L SSDD+E N+DLSLKIVEK M MRAA
Sbjct: 1 MGRKEKQNAKAIDEEHDVVNFNGASTPSL----VFSSDDDEANQDLSLKIVEKAMRMRAA 56
Query: 55 KLDQDDSDSDVVLNDNTNTNTSDNSNNKNGGVEAVVPGPSGTTDDVIIEDVKSSDKKRIR 114
K ND+ ++ S S E VP +DV+ D+ S+
Sbjct: 57 KH---------APNDDVSSPFSQKS-------ELAVP-----LNDVV-SDLPSAIADSEV 94
Query: 115 VRKKKKKEADKIEIEDQSVIVRKEEQKVETADNGDEGVTTVE-----ISDNIVLRKLLRG 169
KKK + + DQSV++ EEQ++E N E VE I N+VLRKLLRG
Sbjct: 95 TEKKKTAKLKREAAGDQSVVI-AEEQEMEETSNATENHEFVEGSPVLIGHNMVLRKLLRG 153
Query: 170 PRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICK 229
PRYFDPPD W C+NCGE+GH AVNC SA KRKKPC+VCG L H RQC+KAQDCFICK
Sbjct: 154 PRYFDPPDSSWGACFNCGEDGHAAVNC-SAAKRKKPCYVCGGLGHNARQCTKAQDCFICK 212
Query: 230 KGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC 289
KGGHRAKDC +KH S ++ +CLKCG+SGHDMFSCRN YS DDLKE+QCY+C+ GHLC
Sbjct: 213 KGGHRAKDCLEKHTSRSKSVAICLKCGNSGHDMFSCRNDYSPDDLKEIQCYVCKRVGHLC 272
Query: 290 CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGE-TVEASPSSCYNCGAEGHFA 348
CVN DA PGE+SC++CGQLGHTGL AC+R R E T A+PSSC+ CG EGHFA
Sbjct: 273 CVNTDDATPGEISCYKCGQLGHTGL-------ACSRLRDEITSGATPSSCFKCGEEGHFA 325
Query: 349 RECVSS----SKVRKRNIDAS-TPTFRPHRENKDHSGIKSAPHDLGKVHKRKKTQHEERG 403
REC SS + KRN ++S T R +EN D+ G +SA +D+ ++K++ EERG
Sbjct: 326 RECTSSINFPPQSGKRNWESSHTKDKRSQKEN-DYMGNRSASNDMVGARRKKRSPTEERG 384
Query: 404 IMTSRKSKQRGGWITDDPGD------------------------ISYGKPKR-------- 431
T +KSK RGGW + P + Y PK+
Sbjct: 385 FSTPKKSKSRGGWTAEYPTEERGFTTPKKSKSRGGWTSEHPLEQKDYTTPKKSKSRGGWM 444
Query: 432 ---------------NHWRSPGTPSSKAHKISAITSGGHFSSPQSS-------------- 462
N +RS GTPSS+ +KI + G H S +SS
Sbjct: 445 SEHPEEFFPPMSSRSNGYRSLGTPSSRNNKIHSFGGGSHTPSYKSSKVWNDHAGTSMSQG 504
Query: 463 IKRNSHHRFSASRFDSSGSDGIRRGYDWW 491
R++HHRFSASRF +S SDG R Y+WW
Sbjct: 505 SARSNHHRFSASRFGNSSSDGHGRNYNWW 533
>gi|224102939|ref|XP_002312862.1| predicted protein [Populus trichocarpa]
gi|222849270|gb|EEE86817.1| predicted protein [Populus trichocarpa]
Length = 640
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 247/560 (44%), Positives = 309/560 (55%), Gaps = 120/560 (21%)
Query: 26 AAAMSSDDEEGNEDLSLKIVEKHMLMRAAKLDQDDSDSDVVLNDNTNTNTSDNSNNKNGG 85
A +SSDDEE NEDLSLKIVEK +LMRAA+L ++ + VVL+D+
Sbjct: 25 VAEVSSDDEEANEDLSLKIVEKSLLMRAARL-AENGNGFVVLDDDGGGGGGGRDGG---A 80
Query: 86 VEAVVP----------GPSGTTDDVIIEDVKSSDKKRIRVRKKKKKEADKIEIE--DQSV 133
VE +P G G ++ + + + + K++++ E E D +
Sbjct: 81 VEIELPSSMEAESASAGSRGVKKRKKRKNAEKKMEVSVVIAKEEEEVDKIEEAETVDNAE 140
Query: 134 IVRKEE--QKVETADNG----DEGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCG 187
I+ K E +KVE + D G VE S NIVLRKLLRGPRYFD D GW CYNCG
Sbjct: 141 IMEKAEKSEKVEVDEAAELVEDGGANAVEDSVNIVLRKLLRGPRYFDTLDSGWSNCYNCG 200
Query: 188 EEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK----------AQDCFICKKGGHRAKD 237
EEGHMAVNC + K+ KPCFVCGSLEHG +QC+K QDCFICK+ GHRA+D
Sbjct: 201 EEGHMAVNCPTFTKKIKPCFVCGSLEHGAKQCTKVCEDITIQKLGQDCFICKESGHRARD 260
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAV 297
CP+K+K Q++++CLKCG SGH+M SC N YS+DDLKE+QCYIC+ FGHLCC D
Sbjct: 261 CPEKYKGTHQSSKICLKCGGSGHEMLSCMNDYSVDDLKEIQCYICKSFGHLCCFTSGDDG 320
Query: 298 PGEVSCFRCGQLGHTGLHWNSCMQACARSRGE-TVEASPSSCYNCGAEGHFARECVSSSK 356
+VSC+RCG+LGHTGL C R E ++ SPSSCY CG GHFAREC SS++
Sbjct: 321 SRQVSCYRCGELGHTGLD-------CGRLHEEASMIESPSSCYRCGEGGHFARECTSSAR 373
Query: 357 VRKRNIDASTPTFRPHRENKDHSGIKSAPHDLGKVHKRKKTQHEERGIMTSRK------- 409
+RN + T T + HRENK+ GIKSAPHDL K K++KT+ EE+GI T +K
Sbjct: 374 GGRRNRELLTLTLKAHRENKESLGIKSAPHDLVKARKKRKTKSEEKGITTPQKSKHKGRH 433
Query: 410 -------------------------------------SKQRGGWITDDPGDISYGKPKR- 431
SK RGGWIT+DPGD+S PK+
Sbjct: 434 IAEHLTNSSQSTPKKSKHRGGWIMEDPGDVSKSTPKQSKHRGGWITEDPGDVSKSTPKKS 493
Query: 432 --------------------NHWRSPGTPSSKAHKISAITSGGHFSSPQSSIKRN-SH-- 468
NH+ SP TPS K K S +TSG H SS Q+ K N SH
Sbjct: 494 KHKGGWITDDPGDVSWSNSMNHFNSPSTPSYKGCKSSPMTSGHHMSSSQTFKKNNWSHSG 553
Query: 469 ------------HRFSASRF 476
HR+SASRF
Sbjct: 554 TSAFQGSATPYQHRYSASRF 573
>gi|255634708|gb|ACU17716.1| unknown [Glycine max]
Length = 389
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 194/398 (48%), Positives = 240/398 (60%), Gaps = 76/398 (19%)
Query: 161 IVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCS 220
+VLRKLLRGPRYFDPPD W C+NCGEEGH AVNC SAVKRKKPC+VCG L H RQCS
Sbjct: 1 MVLRKLLRGPRYFDPPDNSWGACFNCGEEGHAAVNC-SAVKRKKPCYVCGCLGHNARQCS 59
Query: 221 KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCY 280
K QDCFICKK GHRAKDCP+KH S ++ +CLKCG+SGHD+FSCRN YS DDLKE+QCY
Sbjct: 60 KVQDCFICKKDGHRAKDCPEKHTSTSKSIAICLKCGNSGHDIFSCRNDYSQDDLKEIQCY 119
Query: 281 ICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVE-ASPSSCY 339
+C+ GHLCCVN DA GE+SC++CGQLGH GL AC R + E A+PSSC+
Sbjct: 120 VCKRLGHLCCVNTDDATAGEISCYKCGQLGHMGL-------ACLRLQDEIASGATPSSCF 172
Query: 340 NCGAEGHFARECVSS----SKVRKRNIDAS-TPTFRPHRENKDHSGIKSAPHDLGKVHKR 394
CG EGHFAREC SS + K N ++S T R +EN+ + G +SAP+D+ ++
Sbjct: 173 KCGEEGHFARECTSSINFPPQSGKGNWESSRTKDKRSQKENR-YMGNRSAPNDISGARRK 231
Query: 395 KKTQHEERGIMTSRKSKQRGGWITDDPG------------------------DISYGKPK 430
K++ EERG T +KSK RGGW+ + P Y PK
Sbjct: 232 KRSPTEERGFSTPKKSKSRGGWMAEYPTKERGFTTPKKSKSRGGCTTEHPSEQQDYATPK 291
Query: 431 RNH-----------------------WRSPGTPSSKAHKISAITSGGHFSSPQSS----- 462
++ +RSPGTPSS+ +I + G H S +SS
Sbjct: 292 KSKSRGGWTSEHPEEFFPPLSSRSKGYRSPGTPSSRNDRIHSFGGGSHTPSYKSSKVWNG 351
Query: 463 ---------IKRNSHHRFSASRFDSSGSDGIRRGYDWW 491
R++HHR+SASRF +S SDG R Y+WW
Sbjct: 352 HTGTSMSQGSARSNHHRYSASRFGNSSSDGHGRNYNWW 389
>gi|147828626|emb|CAN73043.1| hypothetical protein VITISV_005152 [Vitis vinifera]
Length = 513
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 230/513 (44%), Positives = 281/513 (54%), Gaps = 99/513 (19%)
Query: 1 MATRQKLKGKLYHEENGEEEEKLKSAAAMSS-DDEEGNEDLSLKIVEKHMLMRAAKLDQD 59
M RQK K K+ H+E+ E +S +SS DB NEBLSLKIVEK M RA+K D +
Sbjct: 78 MGRRQKPKAKIDHQEDEEGANSSRSVIYLSSSDBXXANEBLSLKIVEKAM-KRASKTDHN 136
Query: 60 DSDSDVVLNDNTNTNTSDNSNNKNGGVEAVVPGPSGTTDDVIIEDVKSSDKKRIRVRKKK 119
D+ VL + +S ++ V GP+ T DD ++ K +K R K
Sbjct: 137 DA----VLAGRSAVIDLGSSPSEEAEVITDRSGPT-TDDDAEVKSKKKKSRKEKRANKN- 190
Query: 120 KKEADKIEIEDQSVIVRKEEQKVETADNGDEGVTTVEI-----SDNIVLRKLLRGPRYFD 174
IE ++++ + EE+K E+ D E + VE SDNIVLRKLLRGPRYFD
Sbjct: 191 ------IENQEKTDEILMEEKKGES-DKALEILKMVEPXPVEGSDNIVLRKLLRGPRYFD 243
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHR 234
PPD GW CYNCGEEGH AVNC S VKRKKP CF+C H
Sbjct: 244 PPDSGWGACYNCGEEGHNAVNCAS-VKRKKP-------------------CFVCGSLEHN 283
Query: 235 AKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNIS 294
AK C +KE+QCYIC+ FGHLCC+N
Sbjct: 284 AKQC-----------------------------------MKEIQCYICKSFGHLCCINYV 308
Query: 295 DAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEA-SPSSCYNCGAEGHFARECVS 353
D P E SC++CGQLGHTGL ACAR ET + +PSSCY CG +GHFAREC S
Sbjct: 309 DTGPIEPSCYKCGQLGHTGL-------ACARLNAETADVQTPSSCYRCGEQGHFARECKS 361
Query: 354 SSKVRKRNIDASTPTFRPHRENKDHSGIKSAPHDLGKVHKRKKTQHEERGIMTSRKSKQR 413
S+K KR + ST + R +E+KD G KSAP DLG KRKK +EERG +T RK KQR
Sbjct: 362 STKXSKRYSEVSTQSRRFLKEDKDKLGFKSAPKDLGMGXKRKKPWYEERGNITPRKPKQR 421
Query: 414 GGWITDDPGDISYGKPKRNHWRSPGTPSSKAHKISAITSGGHFSSPQSS------IKRN- 466
GGWIT+DPGD K K WRSP TP++K HK +T+ GH++S QSS RN
Sbjct: 422 GGWITEDPGDSPQRKAKVKSWRSPATPTNKNHKRPMLTA-GHYTSSQSSKNTQKFYSRNS 480
Query: 467 --------SHHRFSASRFDSSGSDGIRRGYDWW 491
S HRFSASRF SS SD +RR YDWW
Sbjct: 481 TWQGSAKASQHRFSASRFGSSSSDAVRRHYDWW 513
>gi|357493439|ref|XP_003617008.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355518343|gb|AES99966.1| Cellular nucleic acid-binding protein [Medicago truncatula]
Length = 638
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 183/392 (46%), Positives = 226/392 (57%), Gaps = 65/392 (16%)
Query: 154 TVEISDNIVLRKLLRGPRYFDPP-DRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSL 212
V S+N VLRKLLRGPRYFDPP D W TCYNCGEEGH + NC +A KRKKPCFVCGSL
Sbjct: 253 VVNTSNNTVLRKLLRGPRYFDPPSDNVWGTCYNCGEEGHASFNC-TAAKRKKPCFVCGSL 311
Query: 213 EHGV-RQCSKAQDCFICKKGGHRAKDCPDKHKSGF--QNAQVCLKCGDSGHDMFSCRNSY 269
H ++C + C CK GHR+ DCP KH G ++ VCL+CG+SGHDMF C+N Y
Sbjct: 312 SHNNGKKCIMGRYCSTCKLAGHRSSDCPKKHTGGSNSKSLTVCLRCGNSGHDMFLCKNDY 371
Query: 270 SLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGE 329
S DDLKE+QCY+C+ FGHLCCVN ++A+P E SC++CGQ+GH G W AC+R + E
Sbjct: 372 SQDDLKEIQCYVCKKFGHLCCVNTTEAIPKEFSCYKCGQMGHIG--W-----ACSRLKNE 424
Query: 330 -TVEASPSSCYNCGAEGHFARECVSSSKVRKR----NIDASTP----------------- 367
T +PSSCY CG +GHFAREC SS K R N D +TP
Sbjct: 425 ATAATTPSSCYKCGEQGHFARECSSSVKASSRWQPENTDPATPSSCYRCGEEGHFSRECS 484
Query: 368 ----------------TFRPHRENKDHSGIKSAPHDLGKVHKRKKTQHEERGIMTSRKSK 411
T R +EN H G +SAP+D G K ++ EE I T +KSK
Sbjct: 485 SSVKVGNKKHNLSSTETPRSQKEN-GHMGYRSAPYDNGNNSKMTRSHTEESIIKTLKKSK 543
Query: 412 QRGGWITDDPGDISYGKPKRNHWRSPGTP-----------SSKAHKIS--AITSGGHFSS 458
RG W + GD S KR++WRSP TP +S +H S + T H +
Sbjct: 544 HRGDWTAEHSGDFSPFNSKRDNWRSPITPCTNNSAKNHFYNSGSHNFSSKSFTRNVHDGT 603
Query: 459 PQSS-IKRNSHHRFSASRFDSSGSDGIRRGYD 489
P S R HH +SASRF +S S+G R Y+
Sbjct: 604 PNSEGSTRTFHHGYSASRFGNSSSNGFERSYN 635
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 39/196 (19%)
Query: 1 MATRQKLKGKLYHEENGEEEEKLKSAAAMSSDDEEGNEDLSLKIVEKHMLMRAAKLDQDD 60
M T++K K+ EE+ E S A+S DDEE N+DLSL+I++K +L RA +
Sbjct: 1 MGTKKKSAKKIELEED-ELNASNSSVTAISDDDEEANKDLSLEIIQKALLNRAI-----N 54
Query: 61 SDSDVVLNDNTNTNTSDNSNNKNGGVEAVV------------------------PGPSGT 96
+ VL+ T K V+AV+ G T
Sbjct: 55 PQNGAVLDTQTVKKKRKKKKTKIEVVDAVIVEEKEKEVVETIKAPEKVEHAEVETGMVDT 114
Query: 97 TDDVIIEDVKS-SDKKRIRVRKKKKKEADKIEIEDQSVIVRKEEQK-----VETADNGDE 150
+D+V++ + S S + I+ RKKKKK+ + EI+ + ++ E++K ++ + G+
Sbjct: 115 SDNVVLGNTASESHSEEIKTRKKKKKKKHESEIQTVNAVIVDEKEKEVVKTIKAPEKGEN 174
Query: 151 GVT---TVEISDNIVL 163
V V++SD++VL
Sbjct: 175 AVVETGMVDMSDSVVL 190
>gi|218185703|gb|EEC68130.1| hypothetical protein OsI_36043 [Oryza sativa Indica Group]
Length = 492
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 208/484 (42%), Positives = 271/484 (55%), Gaps = 36/484 (7%)
Query: 14 EENGEEEEKLKSAAAMSSDDEE-GNEDLSLKIVEKHMLMRAAKLDQDDSDSDVVLNDNTN 72
EE G E+ + AA SDDEE GNEDLSL+IV + R + + + +
Sbjct: 17 EEEGSPPERRRRAARSGSDDEEAGNEDLSLEIVARAARRRRRQREASAGFA-------AD 69
Query: 73 TNTSDNSNNKNGGVEAVVPGPSGTTDDVIIEDVKSSDKKRIRVRKKKKKEADKIEIED-- 130
+S + +++ VE PS E K +KR + + + + D
Sbjct: 70 AFSSGDEIDEDAVVELGEADPSSRKRRKEKEKKKRRKEKRKQRKGAPPEGSASTAAADKE 129
Query: 131 QSVIVRKEEQKVETADNG-DEGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEE 189
+S + +E + TA++ E +SDNIVLRKLLR PRYFDP + +TC+NCGEE
Sbjct: 130 ESQVAGTQEAQTGTAESVLTEDGPDAPLSDNIVLRKLLRIPRYFDPGETLLETCFNCGEE 189
Query: 190 GHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNA 249
GH+AVNC KRK+PCFVCG H +QC++ QDCFICKKGGH AKDCP+KH Q +
Sbjct: 190 GHVAVNC-PMEKRKRPCFVCGLFGHNSKQCTQGQDCFICKKGGHIAKDCPEKHNRNTQQS 248
Query: 250 QVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQL 309
CL+CG+SGHDMF C N Y DD+KE++CY+C GHLCC + SD P EVSC+ C Q
Sbjct: 249 TFCLRCGESGHDMFGCANDYPRDDVKEIKCYVCNQKGHLCCADFSDICPKEVSCYNCAQP 308
Query: 310 GHTGLHWNSCMQACARSRGE-TVEASPSSCYNCGAEGHFARECVSSSKVRKRNIDASTPT 368
GHTGL CA+ R E + A+P+ CY CG EGHFAR C ++K + N ++S +
Sbjct: 309 GHTGL-------GCAKQRREVSTAATPTLCYKCGEEGHFARGCTKNTKSDRMNGESSAYS 361
Query: 369 FRPHRENKDHSGIKSAPHDLGKVHKRKKTQHEERGIMTSRKSKQRGGWITDDPGDISYGK 428
+ + KD G +SAPHD K KRK EER + KSK RGGWI DD D Y K
Sbjct: 362 RKKGKGKKDF-GTRSAPHDARKTSKRKSPLFEERRNSSHFKSKARGGWIADDADDQPYKK 420
Query: 429 PKRNHWRSPGTPSSKAHKISAITSGGHFSSPQSS-------------IKRNSH-HRFSAS 474
K N W SP TP K + +SGG +S+PQSS N+ H FS+S
Sbjct: 421 YKPNVWASPSTP-KKQYNNHQFSSGGDYSTPQSSRWQKHGFASPSATYSPNARKHSFSSS 479
Query: 475 RFDS 478
RF S
Sbjct: 480 RFAS 483
>gi|222616180|gb|EEE52312.1| hypothetical protein OsJ_34326 [Oryza sativa Japonica Group]
Length = 800
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 177/354 (50%), Positives = 215/354 (60%), Gaps = 30/354 (8%)
Query: 140 QKVETADNGDEGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSA 199
Q V T D D V +SDNIVLRKLLR PRYFDP + +TC+NCGEEGH+AVNC
Sbjct: 182 QSVLTEDGPD-----VPLSDNIVLRKLLRIPRYFDPGETLLETCFNCGEEGHVAVNC-PM 235
Query: 200 VKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSG 259
KRK+PCFVCG H +QC++ QDCFICKKGGH AKDCP+KH Q + CL+CG+SG
Sbjct: 236 EKRKRPCFVCGLFGHNSKQCTQGQDCFICKKGGHIAKDCPEKHNRNTQQSTFCLRCGESG 295
Query: 260 HDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSC 319
HDMF C N Y DD+KE++CY+C GHLCC + SD P EVSC+ C Q GHTGL
Sbjct: 296 HDMFGCANDYPRDDVKEIKCYVCNQKGHLCCADFSDICPKEVSCYNCAQPGHTGL----- 350
Query: 320 MQACARSRGE-TVEASPSSCYNCGAEGHFARECVSSSKVRKRNIDASTPTFRPHRENKDH 378
CA+ R E + A+P+ CY CG EGHFAR C ++K + N ++S + + + KD
Sbjct: 351 --GCAKQRREASTAATPTLCYKCGEEGHFARGCTKNTKSDRMNGESSAYSRKKGKGKKDF 408
Query: 379 SGIKSAPHDLGKVHKRKKTQHEERGIMTSRKSKQRGGWITDDPGDISYGKPKRNHWRSPG 438
G +SAPHD K KRK EER + KSK RGGWI DD D Y K K N W SP
Sbjct: 409 -GTRSAPHDARKTSKRKSPLFEERRNSSHFKSKARGGWIADDADDQPYKKCKPNVWASPS 467
Query: 439 TPSSKAHKISAITSGGHFSSPQSS--------------IKRNSHHRFSASRFDS 478
TP K + +SGG +S+PQSS H FS+SRF S
Sbjct: 468 TP-KKQYNNHQFSSGGDYSTPQSSRWQKHGFASPSATYSPNTRKHSFSSSRFAS 520
>gi|449532848|ref|XP_004173390.1| PREDICTED: DNA-binding protein HEXBP-like, partial [Cucumis
sativus]
Length = 425
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 191/385 (49%), Positives = 244/385 (63%), Gaps = 29/385 (7%)
Query: 1 MATRQKLKGKLYHEENGEEEEKLKSAA-----AMSSDDEEGNEDLSLKIVEKHMLMRAAK 55
M R K K K E++ +E + LK+AA + SSDD+E NEDL+LKIVEK M +R+ K
Sbjct: 1 MGRRIKQK-KFKFEDDDDELQVLKTAAPKSTNSPSSDDDEANEDLTLKIVEKAMQLRSGK 59
Query: 56 LDQDDSDSDVVLNDNTNTNTSDNSNNKNGGVEAVVPGPSGTTDDVIIEDVKSSD--KKRI 113
L D V D + ++ G +E V G D + +
Sbjct: 60 LVTDAG----VNKDGKCEQSGNDDVYAVGAIELVSSSLEGAEVDAGTSKASADNIATASK 115
Query: 114 RVRKKKKKEADKIEIEDQSVIVRKEEQKVETADNGDEGVTTVE-----ISDNIVLRKLLR 168
+ KK+KK+ K+ E+++V+V E +K+ET + V VE +DN V RKLLR
Sbjct: 116 KTVKKRKKKVKKLGTEERNVVV-TEGEKIETTTGVIDQVDPVEPNLTGTTDNNVFRKLLR 174
Query: 169 GPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFIC 228
GPRYFDPPD W TCYNCGEEGH AVNC+SA KRK+PCFVCGSLEH + CSKA+DCFIC
Sbjct: 175 GPRYFDPPDS-WGTCYNCGEEGHNAVNCKSA-KRKRPCFVCGSLEHNAKSCSKARDCFIC 232
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
KK GHRA CP+KHK+G + ++CLKCGDSGHDMFSC+N Y+ DDLK++QCYIC+ FGHL
Sbjct: 233 KKSGHRANACPEKHKNGSSSLRICLKCGDSGHDMFSCQNHYADDDLKKIQCYICQKFGHL 292
Query: 289 CCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEA-SPSSCYNCGAEGHF 347
CCVN + VSC++CGQ GHTGL +C+R RGE A S S CY CG EGHF
Sbjct: 293 CCVNFTSDTS-VVSCYKCGQTGHTGL-------SCSRLRGEASGAVSSSQCYRCGDEGHF 344
Query: 348 ARECVSSSKVRKRNIDASTPTFRPH 372
AREC S++K KRN + ++ P+
Sbjct: 345 ARECTSATKSGKRNREEASGAASPN 369
>gi|297815456|ref|XP_002875611.1| hypothetical protein ARALYDRAFT_323091 [Arabidopsis lyrata subsp.
lyrata]
gi|297321449|gb|EFH51870.1| hypothetical protein ARALYDRAFT_323091 [Arabidopsis lyrata subsp.
lyrata]
Length = 556
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 203/481 (42%), Positives = 259/481 (53%), Gaps = 89/481 (18%)
Query: 40 LSLKIVEKHMLMR--AAKLDQDDSDSDVVLNDNTNTNTSDNSNNKNGGVEAVVPGPSGTT 97
LSLKI+EK + R KLD D SDS VV N+ NGG V
Sbjct: 45 LSLKILEKALSRRDVGNKLDSDLSDSGVV-----------NTVMVNGGKSKVK------- 86
Query: 98 DDVIIEDVKSSDKKRIRVRKKKKKEADKIEIEDQ--------SVIVRKEEQKVETADNGD 149
KS K+++ K + I DQ V E+ +VE +D
Sbjct: 87 --------KSESNKKMKRNKLEAAHEFPIVWRDQDEEKVVEEVVKGEGEDNEVERSDE-- 136
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
T E S N+VL+KLLRG RYFDPPD GW +CY+CGE+GH + NC + KR+KPCF+C
Sbjct: 137 --PKTEETSSNLVLKKLLRGARYFDPPDAGWVSCYSCGEQGHTSFNCPTPTKRRKPCFIC 194
Query: 210 GSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY 269
GSLEHG +QCSK DC+ICKKGGHRAKDCPDK+K+G + A VCL+CGD GHDM C+ Y
Sbjct: 195 GSLEHGAKQCSKGHDCYICKKGGHRAKDCPDKYKNGSKGA-VCLRCGDFGHDMILCKYEY 253
Query: 270 SLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGL----HW--------- 316
S +DLK++QCY+C+ FGHLCCV ++ VSC+RCGQLGHTGL H+
Sbjct: 254 SQEDLKDIQCYVCKSFGHLCCVEPGNSPSWAVSCYRCGQLGHTGLACGRHYEERNENDSS 313
Query: 317 -------NSCMQACAR--SRGETVEASPSS--------------CYNCGAEGHFARECVS 353
N C R G P+S CY C GHFAREC +
Sbjct: 314 SLSFPENNREASECYRCGEEGHFARECPNSSSISTSQGRESQSLCYRCNGAGHFARECPN 373
Query: 354 SSKVRKRNIDASTPTFRPHRENKDHSGIKSAPHDLG--KVHKRKKTQHEERGIMTSRKSK 411
SS+V KR+ D STP+ + ++NK++ S PH+ K+KKT EE+ + RK K
Sbjct: 374 SSQVSKRDRDTSTPSHKSRKKNKENLEHDSTPHESNGKTKKKKKKTHKEEQPQTSPRKRK 433
Query: 412 QRGGWITDDPGDISYGKPKRNHWRSPGTPS----------SKAHKISAITSGGHFSSPQS 461
RGGWIT+DP + S+ + K +SP TPS ++ SGGHF QS
Sbjct: 434 HRGGWITEDPEEESFQRGKMRRPKSPITPSGYNKSPSTHMGHNYRSPKFNSGGHFPGSQS 493
Query: 462 S 462
S
Sbjct: 494 S 494
>gi|449439166|ref|XP_004137358.1| PREDICTED: cold shock domain-containing protein 3-like [Cucumis
sativus]
Length = 406
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 192/385 (49%), Positives = 244/385 (63%), Gaps = 29/385 (7%)
Query: 1 MATRQKLKGKLYHEENGEEEEKLKSAA-----AMSSDDEEGNEDLSLKIVEKHMLMRAAK 55
M R K K K E++ +E + LK+AA + SSDD+E NEDL+LKIVEK M +R+ K
Sbjct: 1 MGRRIKQK-KFKFEDDDDELQVLKTAAPKSTNSPSSDDDEANEDLTLKIVEKAMQLRSGK 59
Query: 56 LDQDDSDSDVVLNDNTNTNTSDNSNNKNGGVEAVVPGPSGTTDDVIIEDVKSSD--KKRI 113
L D V D + ++ G +E V G D + +
Sbjct: 60 LVTDAG----VNKDGKCEQSGNDDVYAVGAIELVSSSLEGAEVDAGTSKASADNIATASK 115
Query: 114 RVRKKKKKEADKIEIEDQSVIVRKEEQKVETADNGDEGVTTVE-----ISDNIVLRKLLR 168
+ KK+KK+ K+ E+++V+V +EE+ T D+ V VE +DN V RKLLR
Sbjct: 116 KTVKKRKKKVKKLGTEERNVVVTEEEKIETTTGVIDQ-VDPVEPNLTGTTDNNVFRKLLR 174
Query: 169 GPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFIC 228
GPRYFDPPD W TCYNCGEEGH AVNC+SA KRK+PCFVCGSLEH + CSKA+DCFIC
Sbjct: 175 GPRYFDPPD-SWGTCYNCGEEGHNAVNCKSA-KRKRPCFVCGSLEHNAKSCSKARDCFIC 232
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
KK GHRA CP+KHK+G + ++CLKCGDSGHDMFSC+N Y+ DDLK++QCYIC+ FGHL
Sbjct: 233 KKSGHRANACPEKHKNGSSSLRICLKCGDSGHDMFSCQNHYADDDLKKIQCYICQKFGHL 292
Query: 289 CCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEA-SPSSCYNCGAEGHF 347
CCVN + VSC++CGQ GHTGL +C+R RGE A S S CY CG EGHF
Sbjct: 293 CCVNFTSDT-SVVSCYKCGQTGHTGL-------SCSRLRGEASGAVSSSQCYRCGDEGHF 344
Query: 348 ARECVSSSKVRKRNIDASTPTFRPH 372
AREC SS+K KRN + ++ P+
Sbjct: 345 ARECTSSTKSGKRNREEASGAASPN 369
>gi|357156364|ref|XP_003577431.1| PREDICTED: uncharacterized protein LOC100831383 isoform 1
[Brachypodium distachyon]
Length = 476
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 195/466 (41%), Positives = 260/466 (55%), Gaps = 42/466 (9%)
Query: 30 SSDDEEGNEDLSLKIVEKHMLMRAAKLDQDDSDSDVVLNDNTNTNTSDNSNNKNGGVEAV 89
S D++EGNEDLSL+IV + AA +D VVL +SD +++ VE
Sbjct: 29 SDDEDEGNEDLSLEIVARARRREAAGGQPGFADL-VVL-------SSDEEVDEDSVVELG 80
Query: 90 VPGPSGTTDDVIIEDVKSSDKKRIRVRKKKKKEADKIEIEDQSVIVRKEEQKVETADNGD 149
P + K +++ + RK++ D E+ V +E Q
Sbjct: 81 EADPRRKQ-----KKKKRRKERKKKQRKEEGGAGDSAAKEEPQVAGTQEGQTGIAEVVLT 135
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
EG V +SDN VLRKLLR PRYFDP + +TC+NCGEEGH+A NC + KRKKPCF+C
Sbjct: 136 EGGVDVPLSDNTVLRKLLRIPRYFDPGETILETCFNCGEEGHVATNC-TMEKRKKPCFIC 194
Query: 210 GSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNA-QVCLKCGDSGHDMFSCRNS 268
G H +QC++ QDCFICKKGGH AKDCPDKH Q + +CL+CG+ GHDMF+C N
Sbjct: 195 GLFGHIAKQCTQGQDCFICKKGGHMAKDCPDKHNINTQQSTTLCLRCGEIGHDMFACTND 254
Query: 269 YSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRG 328
Y DD+KE++CY+C+ GHLCC + SD P EV+C+ C Q GHTGL CA+ R
Sbjct: 255 YPRDDVKEIKCYVCKQSGHLCCTDFSDNCPKEVTCYNCAQPGHTGL-------GCAKQRR 307
Query: 329 ET-VEASPSSCYNCGAEGHFARECVSSSKVRKRNIDASTPTFRPHRENKDHSGIKSAPHD 387
ET V +P+ CY CG EGHFAR C + + + + S + + + KD SG +SAPHD
Sbjct: 308 ETSVATTPTLCYKCGKEGHFARGCTNIANSDRFKGELSAHSRKKDKWKKD-SGPRSAPHD 366
Query: 388 LGKVHKRKKTQHEERGIMTSRKSKQRGGWITDDPGDISYGKPKRNHWRSPGTPSSKAHKI 447
+KRK E+R KS+ RGGWI DD D+ + K K N W SP TP
Sbjct: 367 ---GYKRKSPLFEDRRDTPHGKSR-RGGWIPDDHDDLPFKKYKSNGWASPSTPKKPYTNH 422
Query: 448 SAITSGGHFSSPQSSIKRNS--------------HHRFSASRFDSS 479
+SG +S+P+SS +N H FS+SRF ++
Sbjct: 423 HQRSSGSDYSTPRSSKWKNQGFSSPSSNYSPNSRKHAFSSSRFSTN 468
>gi|15229721|ref|NP_189945.1| zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]
gi|9967508|emb|CAC05633.1| putative protein [Arabidopsis thaliana]
gi|20466716|gb|AAM20675.1| putative protein [Arabidopsis thaliana]
gi|25084296|gb|AAN72214.1| putative protein [Arabidopsis thaliana]
gi|332644290|gb|AEE77811.1| zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]
Length = 551
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 198/482 (41%), Positives = 264/482 (54%), Gaps = 89/482 (18%)
Query: 40 LSLKIVEKHMLMR--AAKLDQD-DSDSDVVLNDNTNTNTSDNSNNKNGGVEAVVPGPSGT 96
LSLKI+EK + R KLD D SDS VV N S +++ +
Sbjct: 44 LSLKILEKALSRRDVGNKLDSDLSSDSGVVSTVMVNGVKSKVKKSESSKKMKRNKLEADH 103
Query: 97 TDDVIIEDVKSSDKKRIRVRKKKKKEADKIEIEDQSVIVRKEEQKVETADNGDEGVTTVE 156
++ D D++++ V + K E + E+E R +E K E E
Sbjct: 104 EIPIVWND---QDEEKV-VEEIVKGEGEDDEVE------RSDEPKTE------------E 141
Query: 157 ISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGV 216
+ N+VL+KLLRG RYFDPPD GW +CY+CGE+GH + NC + KR+KPCF+CGSLEHG
Sbjct: 142 TASNLVLKKLLRGARYFDPPDAGWVSCYSCGEQGHTSFNCPTPTKRRKPCFICGSLEHGA 201
Query: 217 RQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKE 276
+QCSK DC+ICKK GHRAKDCPDK+K+G + A VCL+CGD GHDM C+ YS +DLK+
Sbjct: 202 KQCSKGHDCYICKKTGHRAKDCPDKYKNGSKGA-VCLRCGDFGHDMILCKYEYSKEDLKD 260
Query: 277 VQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVE---A 333
VQCYIC+ FGHLCCV +++ VSC+RCGQLGH+GL AC R E+ E A
Sbjct: 261 VQCYICKSFGHLCCVEPGNSLSWAVSCYRCGQLGHSGL-------ACGRHYEESNENDSA 313
Query: 334 SP---------SSCYNCGAE-------------------------------GHFARECVS 353
+P S CY CG E GHFAREC +
Sbjct: 314 TPERLFNSREASECYRCGEEGHFARECPNSSSISTSHGRESQTLCYRCNGSGHFARECPN 373
Query: 354 SSKVRKRNIDASTPTFRPHRENKDHSGIKSAPHD---LGKVHKRKKTQHEERGIMTSRKS 410
SS+V KR+ + ST + + ++NK++S S PH+ K K+KKT EE+ + RK
Sbjct: 374 SSQVSKRDRETSTTSHKSRKKNKENSEHDSTPHESNGKTKKKKKKKTHKEEQPQTSPRKR 433
Query: 411 KQRGGWITDDPGDISYGKPKRNHWRSPGTPS----------SKAHKISAITSGGHFSSPQ 460
K RGGWIT++P + S+ + K +SP TPS ++ SGGH+ Q
Sbjct: 434 KHRGGWITEEPEEESFQRGKMRRPKSPITPSGYNRSPSTHIGHNYRSPKFNSGGHYPGSQ 493
Query: 461 SS 462
SS
Sbjct: 494 SS 495
>gi|413925352|gb|AFW65284.1| hypothetical protein ZEAMMB73_494862 [Zea mays]
Length = 515
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 177/444 (39%), Positives = 242/444 (54%), Gaps = 25/444 (5%)
Query: 32 DDEEGNEDLSLKIVEKHMLMRAAKLDQDDSDSDV-VLNDNTNTNTSDNSNNKNGGVEAVV 90
DDE GNEDLSL+IV RA + + +S V V D + +++D AVV
Sbjct: 35 DDELGNEDLSLEIV-----ARAQRKRRGESAGGVPVFADLLSVSSADEEG-------AVV 82
Query: 91 PGPSGTTDDVIIEDVKSSDKKRIRVRKKKKKEADKIEIEDQSVIVRKEEQKVETADNG-D 149
+ + +++ ++ + A D++ + EE + TA++
Sbjct: 83 ELDEADEPRRKQKKKQRRKQRKKHRKETTEAAAGAAVEVDENAVCSTEEGPIGTAESVLT 142
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E SDN+VLRKLLR PRYFDP + +TC+NC EEGH+A NC KRKKPCFVC
Sbjct: 143 ENGADAPASDNMVLRKLLRIPRYFDPGETLLETCFNCSEEGHVAANC-PLEKRKKPCFVC 201
Query: 210 GSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY 269
G H +QC++ QDCFICKKGGH AKDCPDKH+ + +CLKCG+ GHDMF C N Y
Sbjct: 202 GLFGHNAKQCTQGQDCFICKKGGHMAKDCPDKHRRNDHQSTLCLKCGEIGHDMFGCTNDY 261
Query: 270 SLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGE 329
DD+++++CY+C GHLCC + SD P ++SC+ C Q GH+GL CA+ R
Sbjct: 262 PPDDIEKIRCYVCNQKGHLCCSDFSDDCPKQISCYNCAQSGHSGL-------GCAKRRET 314
Query: 330 TVEASPSSCYNCGAEGHFARECVSSSKVRKRNIDASTPTFRPHRENKDHSGIKSAPHDLG 389
+ +P+ C+ CG EGHFAR C ++K + +S+ R + K S +SAP+D
Sbjct: 315 SAVTTPTLCFKCGEEGHFARGCTKNAKSDRSKGKSSSHIQRKEKWKKASSSARSAPYDAR 374
Query: 390 KVHKRKKTQHEERGIMTSRKSKQRGGWITDDPGDISYGKPKRNHWRSPGTPSSKAHKISA 449
K KRK EER K K RGGW D D+ K K N W SP TP K++
Sbjct: 375 KTSKRKSPHLEERVGTPRHKPKSRGGWTGGD--DLPLKKYKSNGWGSPSTP-KKSYANHQ 431
Query: 450 ITSGGHFSSPQSSIKRNSHHRFSA 473
SG + +PQ S + N H S+
Sbjct: 432 FLSGCDYLTPQPSRRHNYHGTMSS 455
>gi|326505632|dbj|BAJ95487.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 480
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 190/435 (43%), Positives = 256/435 (58%), Gaps = 33/435 (7%)
Query: 32 DDEEGNEDLSLKIVEKHMLMRAAKLDQDDSDSDVVLNDNTNTNTSDNSNNKNGGVEAVVP 91
+DE GNEDL+L+IV + AA ++ VL + +SD +++ VE
Sbjct: 36 EDEAGNEDLTLEIVARARRREAAGGQPGFAE---VL-----SLSSDEEVDEDAVVEL--- 84
Query: 92 GPSGTTDDVIIEDVKSSDKKRIRVRKKKKKEADKIEIEDQSVIVRKEEQKVETADNG--D 149
G D ++ K ++R RKK++KE E++ + +E + TA++
Sbjct: 85 ---GEADPSRRKEKKKKKQRRKERRKKQRKEDAAAAPEEEPQVAGAQEGQTGTAESVLIQ 141
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
GV V +SDN VLRKLLR PRYFDP + +TC+NCGEEGH+AVNC KRKKPCFVC
Sbjct: 142 NGV-DVPVSDNTVLRKLLRIPRYFDPGETILETCFNCGEEGHVAVNC-PMEKRKKPCFVC 199
Query: 210 GSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH-KSGFQNAQVCLKCGDSGHDMFSCRNS 268
G H +QC++ Q+CFICKKGGH AKDCPDKH K Q +CL+CG++GHDMF C N
Sbjct: 200 GLFGHNAKQCTQGQECFICKKGGHMAKDCPDKHTKITQQCTALCLRCGETGHDMFGCSND 259
Query: 269 YSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRG 328
Y LDD+KE++CY+C+ GHLCC + +D+ EV+C+ C Q GHTGL CA+ R
Sbjct: 260 YPLDDVKEIKCYVCKQNGHLCCTDFADSCSKEVTCYNCAQSGHTGL-------GCAKQRR 312
Query: 329 ET-VEASPSSCYNCGAEGHFARECVSSSKVRKRNIDASTPTFRPHRENKDHSGIKSAPHD 387
ET V +P+ CY CG +GHFAR C +S+K + + S+ + R R D SG +SAPH
Sbjct: 313 ETSVATTPTLCYKCGEDGHFARGCTNSAKPGRFKGELSSHSRRKDRWKND-SGPRSAPH- 370
Query: 388 LGKVHKRKKTQHEERGIMT--SRKSKQRGGWITDDPGDISYGKPKRNHWRSPGTPSSKAH 445
HKRK ++R S KS+ RGGWI +D D+ K K N W S TP +
Sbjct: 371 --GSHKRKSPLFDDRWETPHGSGKSRARGGWIPEDHDDLPSKKYKGNGWDSQSTPKKHYN 428
Query: 446 KISAITSGGHFSSPQ 460
+SGG +SSPQ
Sbjct: 429 NHHQRSSGGDYSSPQ 443
>gi|326516278|dbj|BAJ92294.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 480
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 189/435 (43%), Positives = 255/435 (58%), Gaps = 33/435 (7%)
Query: 32 DDEEGNEDLSLKIVEKHMLMRAAKLDQDDSDSDVVLNDNTNTNTSDNSNNKNGGVEAVVP 91
+DE GNEDL+L+IV + AA ++ VL + +SD +++ VE
Sbjct: 36 EDEAGNEDLTLEIVARARRREAAGGQPGFAE---VL-----SLSSDEEVDEDAVVEL--- 84
Query: 92 GPSGTTDDVIIEDVKSSDKKRIRVRKKKKKEADKIEIEDQSVIVRKEEQKVETADNG--D 149
G D ++ K ++R RKK++KE E++ + +E + TA++
Sbjct: 85 ---GEADPSRRKEKKKKKQRRKERRKKQRKEDAAAAPEEEPQVAGAQEGQTGTAESVLIQ 141
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
GV V +SDN VLRKLLR P YFDP + +TC+NCGEEGH+AVNC KRKKPCFVC
Sbjct: 142 NGV-DVPVSDNTVLRKLLRIPGYFDPGETILETCFNCGEEGHVAVNC-PMEKRKKPCFVC 199
Query: 210 GSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH-KSGFQNAQVCLKCGDSGHDMFSCRNS 268
G H +QC++ Q+CFICKKGGH AKDCPDKH K Q +CL+CG++GHDMF C N
Sbjct: 200 GLFGHNAKQCTQGQECFICKKGGHMAKDCPDKHTKITRQCTALCLRCGETGHDMFGCSND 259
Query: 269 YSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRG 328
Y LDD+KE++CY+C+ GHLCC + +D+ EV+C+ C Q GHTGL CA+ R
Sbjct: 260 YPLDDVKEIKCYVCKQNGHLCCTDFADSCSKEVTCYNCAQSGHTGL-------GCAKQRR 312
Query: 329 ET-VEASPSSCYNCGAEGHFARECVSSSKVRKRNIDASTPTFRPHRENKDHSGIKSAPHD 387
ET V +P+ CY CG +GHFAR C +S+K + + S+ + R R D SG +SAPH
Sbjct: 313 ETSVATTPTLCYKCGEDGHFARGCTNSAKPGRFKGELSSHSRRKDRWKND-SGPRSAPH- 370
Query: 388 LGKVHKRKKTQHEERGIMT--SRKSKQRGGWITDDPGDISYGKPKRNHWRSPGTPSSKAH 445
HKRK ++R S KS+ RGGWI +D D+ K K N W S TP +
Sbjct: 371 --GSHKRKSPLFDDRWETPHGSGKSRARGGWIPEDHDDLPSKKYKGNGWDSQSTPKKHYN 428
Query: 446 KISAITSGGHFSSPQ 460
+SGG +SSPQ
Sbjct: 429 NHHQRSSGGDYSSPQ 443
>gi|357156367|ref|XP_003577432.1| PREDICTED: uncharacterized protein LOC100831383 isoform 2
[Brachypodium distachyon]
Length = 464
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 180/479 (37%), Positives = 243/479 (50%), Gaps = 80/479 (16%)
Query: 30 SSDDEEGNEDLSLKIVEKHM-------------LMRAAKLDQDDSDSDVVLNDNTNTNTS 76
S D++EGNEDLSL+IV + L+ + ++ D DS V L +
Sbjct: 29 SDDEDEGNEDLSLEIVARARRREAAGGQPGFADLVVLSSDEEVDEDSVVELGEADPRRKQ 88
Query: 77 DNSNNKNGGVEAVVPGPSGTTDDVIIEDVKSSDKKRIRVRKKKKKEADKIEIEDQSVIVR 136
+ + G D E+V +V ++ + E+ V+
Sbjct: 89 KKKKRRKERKKKQRKEEGGAGDSAAKEEVYP------QVAGTQEGQTGIAEV----VLT- 137
Query: 137 KEEQKVETADNGDEGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNC 196
EG V +SDN VLRKLLR PRYFDP + +TC+NCGEEGH+A NC
Sbjct: 138 -------------EGGVDVPLSDNTVLRKLLRIPRYFDPGETILETCFNCGEEGHVATNC 184
Query: 197 RSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNA-QVCLKC 255
+ KRKKPCF+CG H +QC++ QDCFICKKGGH AKDCPDKH Q + +CL+C
Sbjct: 185 -TMEKRKKPCFICGLFGHIAKQCTQGQDCFICKKGGHMAKDCPDKHNINTQQSTTLCLRC 243
Query: 256 GDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLH 315
G+ GHDMF+C N Y DD+KE++CY+C+ GHLCC + SD P E
Sbjct: 244 GEIGHDMFACTNDYPRDDVKEIKCYVCKQSGHLCCTDFSDNCPKE--------------- 288
Query: 316 WNSCMQACARSRGET-VEASPSSCYNCGAEGHFARECVSSSKVRKRNIDASTPTFRPHRE 374
CA+ R ET V +P+ CY CG EGHFAR C + + + + S + + +
Sbjct: 289 ------GCAKQRRETSVATTPTLCYKCGKEGHFARGCTNIANSDRFKGELSAHSRKKDKW 342
Query: 375 NKDHSGIKSAPHDLGKVHKRKKTQHEERGIMTSRKSKQRGGWITDDPGDISYGKPKRNHW 434
KD SG +SAPHD +KRK E+R KS+ RGGWI DD D+ + K K N W
Sbjct: 343 KKD-SGPRSAPHD---GYKRKSPLFEDRRDTPHGKSR-RGGWIPDDHDDLPFKKYKSNGW 397
Query: 435 RSPGTPSSKAHKISAITSGGHFSSPQSSIKRNS--------------HHRFSASRFDSS 479
SP TP +SG +S+P+SS +N H FS+SRF ++
Sbjct: 398 ASPSTPKKPYTNHHQRSSGSDYSTPRSSKWKNQGFSSPSSNYSPNSRKHAFSSSRFSTN 456
>gi|226495087|ref|NP_001142114.1| hypothetical protein [Zea mays]
gi|194707178|gb|ACF87673.1| unknown [Zea mays]
gi|414591597|tpg|DAA42168.1| TPA: hypothetical protein ZEAMMB73_148737 [Zea mays]
Length = 482
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 181/490 (36%), Positives = 247/490 (50%), Gaps = 89/490 (18%)
Query: 32 DDEEGNEDLSLKIVEKHMLMRAAKLDQDDSDSDVVLNDNTNTNTSDNSNNKNGGVEAVVP 91
DDE GNEDLSL+I+ RA + + S V G ++
Sbjct: 35 DDEVGNEDLSLEII-----ARAQRKRRWASCGGVT------------------GFANLLS 71
Query: 92 GPSGTTDDVIIEDVKSSDKKR-------IRVRKKKKKEADK-------IEIEDQSVIVRK 137
SG +D ++E ++ + +R + RK+++KEA ++ E++ V +
Sbjct: 72 VSSGDDEDAVVELAEADEPRRKQKKRQHWKQRKRQRKEATAAAAAAAAVDEEEKEVGTTQ 131
Query: 138 EEQKVETADN--GDEGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVN 195
EEQ + TA++ ++GV S ++ LRKLLR PRYFDP + +TC+NC EEGH+A N
Sbjct: 132 EEQ-IGTAESVLTEDGVD-APTSHSMFLRKLLRIPRYFDPGETLLETCFNCSEEGHVAAN 189
Query: 196 CRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKC 255
C KRKKPCFVCG H +QC + QDCFICKKGGH AKDCPDKHK + +C++C
Sbjct: 190 CPMG-KRKKPCFVCGLFGHNAKQCKQGQDCFICKKGGHMAKDCPDKHKRNDHQSTLCIRC 248
Query: 256 GDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLH 315
G++GHDMF C N Y DD+++++CY C GHLCC + D
Sbjct: 249 GETGHDMFGCANDYPPDDIEQIRCYACNQKGHLCCSDFFD-------------------- 288
Query: 316 WNSCMQACARSRGE-TVEASPSSCYNCGAEGHFARECV---------------SSSKVRK 359
NS Q CA+ R E + +P+ C+ CG EGHFAR C S K R
Sbjct: 289 -NSLEQGCAKQRREASAVTTPTLCFKCGEEGHFARGCTKNAKSDGPKGWSSPHSQRKGRW 347
Query: 360 RNIDASTPTFRPHRENKDHSGIKSAPHDLGKVHKRKKTQHEERGIMTSRKSKQRGGWITD 419
+N S R + K S +SAPHD K EER ++ KSK RGGW D
Sbjct: 348 KNDGKSPSHIRRKEKWKKDSSARSAPHDACTTSKSNSPSFEERMGASNHKSKWRGGWTGD 407
Query: 420 DPGDISYGKPKRNHWRSPGTPSSKAHKISAITSGGHFSSPQSSIKRN--------SHHRF 471
D D+ K K N W SP TP ++ GG + +PQSS + N HRF
Sbjct: 408 D--DLPSKKYKPNGWGSPATPKRSYTNHQYLSGGGDYFTPQSSRRHNHGTASPGARKHRF 465
Query: 472 SASRFDSSGS 481
S+S F +S +
Sbjct: 466 SSSIFAASNT 475
>gi|296089311|emb|CBI39083.3| unnamed protein product [Vitis vinifera]
Length = 686
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 126/181 (69%), Gaps = 7/181 (3%)
Query: 137 KEEQKVETADNGDE----GVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHM 192
+E+++V+T + D + +++I DNIVL+KLL+ PR FDPP+ W+ C+N EE
Sbjct: 504 REQKQVDTCKSVDTVKLFQIESIDIKDNIVLQKLLQAPRCFDPPESSWRMCHNSEEEAPT 563
Query: 193 AVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVC 252
AV C SA K+KKPCF+CGS +H C +A++CF+ ++ H + CP+K++ ++ +C
Sbjct: 564 AVAC-SAEKQKKPCFLCGSFKHSGNHCKQARNCFVYERSQH-TRSCPEKNQGNCPSSMIC 621
Query: 253 LKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHT 312
L+CG SGHDM CRN YS DDLKE+QCY+C+ +GHLCCV+ D +P + SC++CG GH
Sbjct: 622 LRCGGSGHDMLFCRNEYSSDDLKEIQCYVCKRYGHLCCVDFPD-IPRQASCYKCGHYGHL 680
Query: 313 G 313
G
Sbjct: 681 G 681
>gi|242068929|ref|XP_002449741.1| hypothetical protein SORBIDRAFT_05g022420 [Sorghum bicolor]
gi|241935584|gb|EES08729.1| hypothetical protein SORBIDRAFT_05g022420 [Sorghum bicolor]
Length = 261
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/262 (42%), Positives = 147/262 (56%), Gaps = 24/262 (9%)
Query: 235 AKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNIS 294
AKDCPDKHK + +CL+CG++GHDMF C N Y DD+++++CY+C GHLCC + S
Sbjct: 2 AKDCPDKHKRNDHQSTLCLRCGETGHDMFGCTNDYPQDDIEQIRCYVCNQKGHLCCSDFS 61
Query: 295 DAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEA-SPSSCYNCGAEGHFARECVS 353
D P ++SC+ C Q GH+GL CA+ R ET A SP+ CY CG EGHFAR C
Sbjct: 62 DNCPKQISCYNCAQSGHSGL-------GCAKQRRETSAATSPTLCYKCGEEGHFARGCTK 114
Query: 354 SSKVRKRNIDASTPTFRPHRENKDHSGIKSAPHDLGKVHKRKKTQHEERGIMTSRKSKQR 413
++K + +S+ + R + KD S +SAPHD K KRK EER KSK R
Sbjct: 115 NAKSNRSKGKSSSHSQRKEKWKKDASA-RSAPHDARKTSKRKSPHFEERMDTPRHKSKSR 173
Query: 414 GGWITDDPGDISYGKPKRNHWRSPGTPSSKAHKISAITSGGHFSSPQSSIKRN------- 466
GGW D D+ K K N W SP TP K++ SGG + +PQSS + N
Sbjct: 174 GGWTGGDDDDLPLKKYKSNGWGSPSTP-KKSYTNHQFLSGGDYFTPQSSRRHNHGTTSPS 232
Query: 467 -------SHHRFSASRFDSSGS 481
H FS+SRF +S +
Sbjct: 233 SNYSPSARKHGFSSSRFATSNT 254
>gi|108864537|gb|ABA94400.2| Zinc knuckle family protein, expressed [Oryza sativa Japonica
Group]
Length = 232
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 127/232 (54%), Gaps = 24/232 (10%)
Query: 262 MFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQ 321
MF C N Y DD+KE++CY+C GHLCC + SD P EVSC+ C Q GHTGL
Sbjct: 1 MFGCANDYPRDDVKEIKCYVCNQKGHLCCADFSDICPKEVSCYNCAQPGHTGL------- 53
Query: 322 ACARSRGE-TVEASPSSCYNCGAEGHFARECVSSSKVRKRNIDASTPTFRPHRENKDHSG 380
CA+ R E + A+P+ CY CG EGHFAR C ++K + N ++S + + + KD G
Sbjct: 54 GCAKQRREASTAATPTLCYKCGEEGHFARGCTKNTKSDRMNGESSAYSRKKGKGKKDF-G 112
Query: 381 IKSAPHDLGKVHKRKKTQHEERGIMTSRKSKQRGGWITDDPGDISYGKPKRNHWRSPGTP 440
+SAPHD K KRK EER + KSK RGGWI DD D Y K K N W SP TP
Sbjct: 113 TRSAPHDARKTSKRKSPLFEERRNSSHFKSKARGGWIADDADDQPYKKCKPNVWASPSTP 172
Query: 441 SSKAHKISAITSGGHFSSPQSS--------------IKRNSHHRFSASRFDS 478
K + +SGG +S+PQSS H FS+SRF S
Sbjct: 173 -KKQYNNHQFSSGGDYSTPQSSRWQKHGFASPSATYSPNTRKHSFSSSRFAS 223
>gi|224138186|ref|XP_002322751.1| predicted protein [Populus trichocarpa]
gi|222867381|gb|EEF04512.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/243 (40%), Positives = 133/243 (54%), Gaps = 34/243 (13%)
Query: 123 ADKIEIEDQSVIVRKEEQKVETADNGDEGVTT-------VEISDNIVLRKLLRGPRYFDP 175
A+ + E V K+++KV+ A + T VE +DNIVLR+LLR RYFD
Sbjct: 38 AETVPAETFIVNAMKQKRKVDRASKEMQEDTAKGMEREQVEFTDNIVLRQLLRRTRYFDG 97
Query: 176 PD-RGWQTCYNCGEEGHMAVNCRSAVKRKKP-CFVCGSLEHGVRQCSKAQDCFICKKGGH 233
P W+ C NCG+EGHM C+ ++KK CF+C SL+H R+C K + C +CK GH
Sbjct: 98 PSYNSWEMCSNCGQEGHMVCQCKMRKRKKKKLCFLCESLDHIGRRCRKNRYCSVCKGRGH 157
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNI 293
+A+ CP++ + + +CL+CG+SGHDMFSC Y DLKE+QCY+CR FGHLCC +
Sbjct: 158 KARYCPERDQERSSHG-ICLQCGNSGHDMFSCTADYLPSDLKEIQCYVCRSFGHLCCADF 216
Query: 294 SDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVS 353
D P E CG G T + ++CY CG E HFAR C
Sbjct: 217 PDTDPRE----SCGATGSTKAY--------------------TTCYKCGEEDHFARNCSK 252
Query: 354 SSK 356
K
Sbjct: 253 QGK 255
>gi|413925351|gb|AFW65283.1| hypothetical protein ZEAMMB73_494862 [Zea mays]
Length = 270
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/239 (38%), Positives = 125/239 (52%), Gaps = 30/239 (12%)
Query: 235 AKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNIS 294
AKDCPDKH+ + +CLKCG+ GHDMF C N Y DD+++ GHLCC + S
Sbjct: 2 AKDCPDKHRRNDHQSTLCLKCGEIGHDMFGCTNDYPPDDIEK---------GHLCCSDFS 52
Query: 295 DAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
D P ++SC+ C Q GH+GL CA+ R + +P+ C+ CG EGHFAR C +
Sbjct: 53 DDCPKQISCYNCAQSGHSGL-------GCAKRRETSAVTTPTLCFKCGEEGHFARGCTKN 105
Query: 355 SKVRKRNIDASTPTFRPHRENKDHSGIKSAPHDLGKVHKRKKTQHEERGIMTSRKSKQRG 414
+K++++ + K S +SAP+D K KRK EER K K RG
Sbjct: 106 AKIQRKE-----------KWKKASSSARSAPYDARKTSKRKSPHLEERVGTPRHKPKSRG 154
Query: 415 GWITDDPGDISYGKPKRNHWRSPGTPSSKAHKISAITSGGHFSSPQSSIKRNSHHRFSA 473
GW D D+ K K N W SP TP K++ SG + +PQ S + N H S+
Sbjct: 155 GWTGGD--DLPLKKYKSNGWGSPSTP-KKSYANHQFLSGCDYLTPQPSRRHNYHGTMSS 210
>gi|414591599|tpg|DAA42170.1| TPA: hypothetical protein ZEAMMB73_148737 [Zea mays]
Length = 256
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 129/271 (47%), Gaps = 47/271 (17%)
Query: 235 AKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNIS 294
AKDCPDKHK + +C++CG++GHDMF C N Y DD+++++CY C GHLCC +
Sbjct: 2 AKDCPDKHKRNDHQSTLCIRCGETGHDMFGCANDYPPDDIEQIRCYACNQKGHLCCSDFF 61
Query: 295 DAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGE-TVEASPSSCYNCGAEGHFARECV- 352
D NS Q CA+ R E + +P+ C+ CG EGHFAR C
Sbjct: 62 D---------------------NSLEQGCAKQRREASAVTTPTLCFKCGEEGHFARGCTK 100
Query: 353 --------------SSSKVRKRNIDASTPTFRPHRENKDHSGIKSAPHDLGKVHKRKKTQ 398
S K R +N S R + K S +SAPHD K
Sbjct: 101 NAKSDGPKGWSSPHSQRKGRWKNDGKSPSHIRRKEKWKKDSSARSAPHDACTTSKSNSPS 160
Query: 399 HEERGIMTSRKSKQRGGWITDDPGDISYGKPKRNHWRSPGTPSSKAHKISAITSGGHFSS 458
EER ++ KSK RGGW DD D+ K K N W SP TP ++ GG + +
Sbjct: 161 FEERMGASNHKSKWRGGWTGDD--DLPSKKYKPNGWGSPATPKRSYTNHQYLSGGGDYFT 218
Query: 459 PQSSIKRN--------SHHRFSASRFDSSGS 481
PQSS + N HRFS+S F +S +
Sbjct: 219 PQSSRRHNHGTASPGARKHRFSSSIFAASNT 249
>gi|164605537|dbj|BAF98603.1| CM0545.270.nc [Lotus japonicus]
Length = 259
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 140/294 (47%), Gaps = 85/294 (28%)
Query: 126 IEIEDQSVIVRKEEQKVETADNGDEGVTTVEISDNIVLRKLLRGPRYFDPP-DRGWQTCY 184
+ ++++V K QK+E ++ G TV++SDN+VLRKLLRGPRY+DPP D GW+TCY
Sbjct: 12 VLFQEEAVETIKGTQKMEPSEAG-----TVQMSDNVVLRKLLRGPRYYDPPADCGWETCY 66
Query: 185 NCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKS 244
NCGEEGH V C +A + KKPC++CGSL H ++C K C++CK GH
Sbjct: 67 NCGEEGHATVKCAAAKELKKPCYLCGSLMHQAKRCKKEIQCYVCKSFGH----------- 115
Query: 245 GFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCF 304
C N+ + E+ CY C
Sbjct: 116 ------------------LCCANTTGSTPI-EISCYKC---------------------- 134
Query: 305 RCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVRKRNIDA 364
GQ GHTGL C+ +G+ N G + +VRKR
Sbjct: 135 --GQTGHTGL------ARCSHVQGKNFFTE-----NAGV--------MVKEEVRKRGHTL 173
Query: 365 S---TPTFRPHRENKDHSGIKSAPHDLGKVHKRKKTQHEERGIMTSRKSKQRGG 415
S +PTF+ +EN + G +SAPHD+G + KK EER I T + SK RGG
Sbjct: 174 SNTESPTFQ--KEN-GYMGDRSAPHDMGMPYMEKKPLTEERAITTQQPSKHRGG 224
>gi|412994131|emb|CCO14642.1| predicted protein [Bathycoccus prasinos]
Length = 421
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 106/198 (53%), Gaps = 13/198 (6%)
Query: 159 DNIVLRKLLRGPRYFDPP-DRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVR 217
+N +R++LR PRYFD + C+ CG+ GH C K +KPC +CG +H R
Sbjct: 135 ENTTVREILRLPRYFDDDFEAAAMRCFRCGKGGHREFECTLPAK-QKPCHLCGDFDHQAR 193
Query: 218 QCSKAQDCFICKKGGHRAKDCPDKHKSGF-QNAQVCLKCGDSGHDMFSCRNSYSLDDLKE 276
C K CF C GHR++DC ++ G Q + CL+CG SGH + C ++S DLK
Sbjct: 194 DCPKGL-CFNCLTPGHRSRDCEERRGIGRDQQSLCCLRCGRSGHVVEKCMFTFSEADLKR 252
Query: 277 VQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPS 336
+ CY+C FGHLCC PG++SC +CG GH ++C + R E
Sbjct: 253 MPCYVCGEFGHLCCAPQDSQPPGKLSCVKCGGEGHV---ESTCRHSNFRRSQGGFE---- 305
Query: 337 SCYNCGAEGHFARECVSS 354
C+NCG H AREC +S
Sbjct: 306 -CFNCGGP-HLARECPNS 321
>gi|449439567|ref|XP_004137557.1| PREDICTED: uncharacterized protein LOC101213019 [Cucumis sativus]
Length = 206
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 96/184 (52%), Gaps = 30/184 (16%)
Query: 333 ASPSSCYNCGAEGHFARECVSSSKVRKRNIDASTPTFRPHRENKDHSGIKSAPHDLGKVH 392
ASPSSCY CG +GHFAREC S+K KRN + S P +R E ++ G KSAPHD
Sbjct: 28 ASPSSCYRCGEQGHFARECAGSTKGGKRNRELSNPKWRSQVEETNYMGSKSAPHD----- 82
Query: 393 KRKKTQHEERGIMTSRKSKQRGGWITDDPG--DISYGKPKRNHWRSPGTPSSKAHKISAI 450
K+KK HEER RKS QRG W+ +DPG + S G RN W SP TPS H A
Sbjct: 83 KKKKINHEERYSNLPRKSGQRGRWMMEDPGPDNFSPGTFNRNDWNSPVTPSRWGHDYYAE 142
Query: 451 TSG--------GHFSSPQSSIKRNSHHRF---------------SASRFDSSGSDGIRRG 487
G GH++SPQSS ++H F SASRF + G R
Sbjct: 143 YDGQYADTHFSGHYASPQSSGHYSNHQSFSKRHAFHPGTPQNGYSASRFGGFSNGGRSRS 202
Query: 488 YDWW 491
Y WW
Sbjct: 203 YGWW 206
>gi|308807348|ref|XP_003080985.1| E3 ubiquitin ligase interacting with arginine methyltransferase
(ISS) [Ostreococcus tauri]
gi|116059446|emb|CAL55153.1| E3 ubiquitin ligase interacting with arginine methyltransferase
(ISS) [Ostreococcus tauri]
Length = 276
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 104/203 (51%), Gaps = 13/203 (6%)
Query: 153 TTVEISDNIVLRKLLRGPRYFDPP-DRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGS 211
T + +N +R +LR PRYFD + C+ CG+ GH C K KKPC +CG
Sbjct: 27 TPRDDQENEEVRNILRQPRYFDDDYEAAALRCFRCGQGGHREAECELPAK-KKPCHLCGY 85
Query: 212 LEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGF-QNAQVCLKCGDSGHDMFSCRNSYS 270
H R C C+ C GH+++DCP SG A CL+CG SGH + C +
Sbjct: 86 KSHVARDCPHGL-CYNCLTPGHQSRDCPYVRGSGRDAQALCCLRCGKSGHVVADCVYRFD 144
Query: 271 LDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARS-RGE 329
+DL ++ CY+C GHLCC PG +C RCG GH L ACA + RG
Sbjct: 145 ANDLAQIHCYVCGSIGHLCCAPQDALPPGVPTCCRCGGNGHLDL-------ACAHARRGF 197
Query: 330 TVEASPS-SCYNCGAEGHFAREC 351
++P SC++CG GH AREC
Sbjct: 198 GGGSAPEFSCFHCGERGHIAREC 220
>gi|218185973|gb|EEC68400.1| hypothetical protein OsI_36561 [Oryza sativa Indica Group]
Length = 284
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 321 QACARSRGE-TVEASPSSCYNCGAEGHFARECVSSSKVRKRNIDASTPTFRPHRENKDHS 379
Q CA+ R E + A+P+ CY CG EGHFAR C ++K + N ++S + + + KD
Sbjct: 105 QGCAKQRREASTAATPTLCYKCGEEGHFARGCTKNTKSDRMNGESSAYSRKKGKGKKDF- 163
Query: 380 GIKSAPHDLGKVHKRKKTQHEERGIMTSRKSKQRGGWITDDPGDISYGKPKRNHWRSPGT 439
G +SAPHD K KRK EER + KSK RGGWI DD D Y K K N W SP T
Sbjct: 164 GTRSAPHDARKTSKRKSPLFEERRNSSHFKSKARGGWIADDADDQPYKKCKPNVWASPST 223
Query: 440 PSSKAHKISAITSGGHFSSPQSS--------------IKRNSHHRFSASRFDS 478
P K + +SGG +S+PQSS H FS+SRF S
Sbjct: 224 P-KKQYNNRQFSSGGDYSTPQSSRWQKHGFASPSATYSPNTRKHSFSSSRFAS 275
>gi|145350100|ref|XP_001419461.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579692|gb|ABO97754.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 170
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 90/175 (51%), Gaps = 14/175 (8%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C+ CG+ GH C K KK C +CG H R C CF C GH+++DCP
Sbjct: 6 CFRCGQGGHREAECELPAK-KKACHLCGYKSHIARDCPHGL-CFNCLTPGHQSRDCPYAR 63
Query: 243 KSGFQNAQ--VCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGE 300
SG ++AQ CL+CG SGH + C + DL ++ CY+C GHLCC PG
Sbjct: 64 GSG-RDAQERCCLRCGKSGHVVADCVYRFDASDLAQIHCYVCGSKGHLCCAPQDSLPPGL 122
Query: 301 VSCFRCGQLGHTGLHWNSCMQACARS-RGETVEASPS-SCYNCGAEGHFARECVS 353
SC RCG GH ACA S RG A+P +C++CG GH AREC S
Sbjct: 123 PSCCRCGGDGHLD-------TACAHSRRGFGGGAAPDFACFHCGQRGHIARECPS 170
>gi|15239349|ref|NP_198473.1| zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]
gi|9759037|dbj|BAB09364.1| unnamed protein product [Arabidopsis thaliana]
gi|332006678|gb|AED94061.1| zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]
Length = 254
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 68/109 (62%), Gaps = 10/109 (9%)
Query: 249 AQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQ 308
A+VCL+CG GHDM C+ YS +DLK ++CY+C GHLCC+ VSC+RCGQ
Sbjct: 25 AEVCLRCGGFGHDMTLCKYEYSHEDLKNIKCYVCNSLGHLCCIEPGHTQSWTVSCYRCGQ 84
Query: 309 LGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKV 357
LGHTGL AC R ++V SP SC+ CG EGHF +C +S V
Sbjct: 85 LGHTGL-------ACGRHYDDSV--SP-SCFICGREGHFEHQCHNSFSV 123
>gi|15229296|ref|NP_189935.1| Zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]
gi|7288027|emb|CAB81789.1| hypothetical protein [Arabidopsis thaliana]
gi|332644278|gb|AEE77799.1| Zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]
Length = 260
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 97/194 (50%), Gaps = 32/194 (16%)
Query: 33 DEEGNEDLSLKIVEKHMLMRAA--KLDQDDSDSDVVLNDNTNTNTSDNSNNKNGGVEAVV 90
D+E NEDL LKI+EK R KLD D S + GV + V
Sbjct: 23 DDEANEDLRLKILEKAFSRRNVDNKLDSDLS--------------------FDPGVVSTV 62
Query: 91 PGPSGTTDDVIIEDVKSSDKKRIRVRKKKKKEADKIEIEDQSVIVRKEEQKVETADNGDE 150
G +++V + K + K+ K EA EI V + E+ VE G+E
Sbjct: 63 MVNGGKSEEV-------KNSKSNKKMKRNKLEAAN-EIVTHCVERQDEDNMVEDVVRGEE 114
Query: 151 GVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCG 210
E + N V+ KLLRG RYFDP D GW TCY+CGE+ H+ V+C + +K CF+C
Sbjct: 115 --EDGETTSNSVMTKLLRGARYFDPLDAGWVTCYSCGEKDHITVSCPTLTNCRKSCFICA 172
Query: 211 SLEHGVRQCSKAQD 224
SLEHG RQC+K D
Sbjct: 173 SLEHGARQCTKVWD 186
>gi|255581588|ref|XP_002531599.1| cellular nucleic acid binding protein, putative [Ricinus communis]
gi|223528795|gb|EEF30802.1| cellular nucleic acid binding protein, putative [Ricinus communis]
Length = 167
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 68/133 (51%), Gaps = 5/133 (3%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGE 300
KH+ + CL+CG GH+MFSCR Y DDLKE+QCY+C+ FGHLCC + D P E
Sbjct: 14 KHQENKSHPDACLRCGGPGHEMFSCRTDYLPDDLKEIQCYVCKKFGHLCCHDFPDLYPTE 73
Query: 301 VSCFRCGQLGHTG--LHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVR 358
+SC+ CGQ GH G L C C + ++ P C G +G A C + K
Sbjct: 74 LSCYNCGQSGHLGSRLFCKECPNLCGAT---MIQEKPLLCATDGEQGPLAPTCSNHVKNS 130
Query: 359 KRNIDASTPTFRP 371
+ T P
Sbjct: 131 YASFRCDPGTLSP 143
>gi|297805180|ref|XP_002870474.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316310|gb|EFH46733.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 176
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 67/111 (60%), Gaps = 21/111 (18%)
Query: 247 QNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRC 306
+ A+VCL+CG+ GHDM C+ YS +DLK+++CY+C+ GHLCC+ S + VSC+RC
Sbjct: 7 EAAEVCLRCGEFGHDMTLCKYEYSQEDLKDIKCYVCKSLGHLCCIEPSHSPSWTVSCYRC 66
Query: 307 GQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKV 357
GQLGHTGL +SC+ C EGHF +C +SS V
Sbjct: 67 GQLGHTGL---------------------ASCFICEGEGHFEHQCPNSSSV 96
>gi|115485975|ref|NP_001068131.1| Os11g0573200 [Oryza sativa Japonica Group]
gi|113645353|dbj|BAF28494.1| Os11g0573200, partial [Oryza sativa Japonica Group]
Length = 129
Score = 95.5 bits (236), Expect = 5e-17, Method: Composition-based stats.
Identities = 48/82 (58%), Positives = 57/82 (69%), Gaps = 6/82 (7%)
Query: 140 QKVETADNGDEGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSA 199
Q V T D D V +SDNIVLRKLLR PRYFDP + +TC+NCGEEGH+AVNC
Sbjct: 22 QSVLTEDGPD-----VPLSDNIVLRKLLRIPRYFDPGETLLETCFNCGEEGHVAVNC-PM 75
Query: 200 VKRKKPCFVCGSLEHGVRQCSK 221
KRK+PCFVCG H +QC++
Sbjct: 76 EKRKRPCFVCGLFGHNSKQCTQ 97
>gi|414591598|tpg|DAA42169.1| TPA: hypothetical protein ZEAMMB73_148737 [Zea mays]
Length = 226
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 106/212 (50%), Gaps = 42/212 (19%)
Query: 32 DDEEGNEDLSLKIVEKHMLMRAAKLDQDDSDSDVVLNDNTNTNTSDNSNNKNGGVEAVVP 91
DDE GNEDLSL+I+ + R S G ++
Sbjct: 35 DDEVGNEDLSLEIIARAQRKRRWA-----------------------SCGGVTGFANLLS 71
Query: 92 GPSGTTDDVIIEDVKSSDKKR-------IRVRKKKKKEADK-------IEIEDQSVIVRK 137
SG +D ++E ++ + +R + RK+++KEA ++ E++ V +
Sbjct: 72 VSSGDDEDAVVELAEADEPRRKQKKRQHWKQRKRQRKEATAAAAAAAAVDEEEKEVGTTQ 131
Query: 138 EEQKVETADN--GDEGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVN 195
EEQ + TA++ ++GV S ++ LRKLLR PRYFDP + +TC+NC EEGH+A N
Sbjct: 132 EEQ-IGTAESVLTEDGVD-APTSHSMFLRKLLRIPRYFDPGETLLETCFNCSEEGHVAAN 189
Query: 196 CRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFI 227
C KRKKPCFVCG H +QC + ++
Sbjct: 190 CPMG-KRKKPCFVCGLFGHNAKQCKQVGPPYL 220
>gi|303278606|ref|XP_003058596.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459756|gb|EEH57051.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 291
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 206 CFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQN-AQVCLKCGDSGHDMFS 264
C +CG L+H R C + CF C K GH+++DCP+ G + A CL+CG GH
Sbjct: 1 CHLCGYLDHLARDCRRGL-CFNCLKSGHQSRDCPEPRGVGRETQALCCLRCGGRGHAATD 59
Query: 265 CRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEV----------SCFRCGQLGHTGL 314
C S++ D+ V CY+C FGHLCC + +A SC RCG +GH +
Sbjct: 60 CARSFAASDVARVACYVCGEFGHLCCASQDEAAGALASAGGGGGKRKSCCRCGGMGH--V 117
Query: 315 HWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSS 355
+ + AR GE +C+ CG GH AREC S+S
Sbjct: 118 DADCAQRDAARFLGEL------ACFRCGKRGHIARECPSAS 152
>gi|168009954|ref|XP_001757670.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691364|gb|EDQ77727.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 106
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 78/171 (45%), Gaps = 65/171 (38%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
+TCYNCG++GH A C + R+KP C++C GH + DCP+
Sbjct: 1 ETCYNCGQQGHWAAEC-TKQAREKP-------------------CYVCGNFGHFSYDCPE 40
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGE 300
++CYIC+ GH+CC+++SDA P
Sbjct: 41 A-----------------------------------LRCYICKRTGHMCCIDVSDASPTP 65
Query: 301 VSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
VSC+RCG LGH+G+ S + + ++CY CG EGHFAREC
Sbjct: 66 VSCYRCGDLGHSGV----------VSISQDSYENQTACYRCGNEGHFAREC 106
>gi|359481085|ref|XP_002266540.2| PREDICTED: uncharacterized protein LOC100252970 [Vitis vinifera]
Length = 248
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 58/87 (66%), Gaps = 5/87 (5%)
Query: 137 KEEQKVETADNGDE----GVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHM 192
+E+++V+T + D + +++I DNIVL+KLL+ PR FDPP+ W+ C+N EE
Sbjct: 105 REQKQVDTCKSVDTVKLFQIESIDIKDNIVLQKLLQAPRCFDPPESSWRMCHNSEEEAPT 164
Query: 193 AVNCRSAVKRKKPCFVCGSLEHGVRQC 219
AV C SA K+KKPCF+CGS +H C
Sbjct: 165 AVAC-SAEKQKKPCFLCGSFKHSGNHC 190
>gi|400621674|gb|AFP87471.1| vasa-like protein, partial [Nematostella vectensis]
Length = 906
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 83/190 (43%), Gaps = 25/190 (13%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKRK--KPCFVCGSLEHGVRQCSKAQD-------C 225
P G + C+ CGEEGH A C + + + C CG H R+C C
Sbjct: 214 PSQGGARACHKCGEEGHFARECPNQPSQGGGRACHKCGEEGHFARECPNQPSQGGWCLTC 273
Query: 226 FICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCF 285
C++ GH A+DCP++ G C KCG GH C N S C+ C
Sbjct: 274 HKCREEGHYARDCPNQPSQGMGGGGACHKCGKEGHFSRECPNQDSQRIGGGRNCHKCGQE 333
Query: 286 GHLC--CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGA 343
GH C N + G +C +CG++GH + C RG++ +C+ CG
Sbjct: 334 GHFSRECPNQTSQ--GSGTCHKCGEVGHF-------ARECPTGRGQS-----DTCHKCGE 379
Query: 344 EGHFARECVS 353
GH++REC +
Sbjct: 380 TGHYSRECPT 389
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 85/185 (45%), Gaps = 23/185 (12%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVKRK---KPCFVCGSLEHGVRQCSK------AQDCFICK 229
G C+ CG+EGH + +C + R+ + C CG H R+C A+ C C
Sbjct: 167 GGGACHRCGQEGHFSRDCPNPPTRQGNGRACHKCGEEGHFARECPNQPSQGGARACHKCG 226
Query: 230 KGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL- 288
+ GH A++CP++ G + C KCG+ GH C N S + C+ CR GH
Sbjct: 227 EEGHFARECPNQPSQG--GGRACHKCGEEGHFARECPNQPSQGGWC-LTCHKCREEGHYA 283
Query: 289 --CCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGH 346
C S + G +C +CG+ GH + C + + +C+ CG EGH
Sbjct: 284 RDCPNQPSQGMGGGGACHKCGKEGHFS-------RECPNQDSQRIGGG-RNCHKCGQEGH 335
Query: 347 FAREC 351
F+REC
Sbjct: 336 FSREC 340
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVKRKK-PCFVCGSLEHGVRQC----SKAQDCFICKKGGH 233
G + C+ CG+EGH + C + + C CG + H R+C ++ C C + GH
Sbjct: 323 GGRNCHKCGQEGHFSRECPNQTSQGSGTCHKCGEVGHFARECPTGRGQSDTCHKCGETGH 382
Query: 234 RAKDCPDKHKSGF 246
+++CP G
Sbjct: 383 YSRECPTLGNGGL 395
>gi|161752|gb|AAC37171.1| cnjB [Tetrahymena thermophila]
gi|737494|prf||1922371A cnjB gene
Length = 1748
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 83/188 (44%), Gaps = 28/188 (14%)
Query: 183 CYNCGEEGHMAVNC----RSAVKRKKPCFVCGSLEHGVRQCSKAQD----CFICKKGGHR 234
C+ CG+ GHMA +C + K+ CF C H + C Q CF C + GH
Sbjct: 1451 CFKCGKVGHMAKDCTEPQQQGRKQSGACFKCNQEGHMSKDCPNQQQKKSGCFKCGEEGHF 1510
Query: 235 AKDCPDKHKSGFQNAQ--VCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--C 290
+KDCP+ K Q + C KCG+ GH C N ++ C+ C+ GH+ C
Sbjct: 1511 SKDCPNPQKQQQQKPRGGACFKCGEEGHISKDCPNPQK--QQQKNTCFKCKQEGHISKDC 1568
Query: 291 VNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARE 350
N ++ G CF C Q GH C + +G C+NCG EGH +RE
Sbjct: 1569 PNSQNS--GGNKCFNCNQEGHMS---KDCPNPSQKKKG---------CFNCGEEGHQSRE 1614
Query: 351 CVSSSKVR 358
C K R
Sbjct: 1615 CTKERKER 1622
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 27/161 (16%)
Query: 220 SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQC 279
+K + CF C K GH AKDC + + G + + C KC GH C N K+ C
Sbjct: 1446 NKGKGCFKCGKVGHMAKDCTEPQQQGRKQSGACFKCNQEGHMSKDCPNQQQ----KKSGC 1501
Query: 280 YICRCFGHLC--CVNISDAVPGEV---SCFRCGQLGHTG---------LHWNSCMQACAR 325
+ C GH C N + +CF+CG+ GH N+C + +
Sbjct: 1502 FKCGEEGHFSKDCPNPQKQQQQKPRGGACFKCGEEGHISKDCPNPQKQQQKNTCFK--CK 1559
Query: 326 SRGETVEASPSS-------CYNCGAEGHFARECVSSSKVRK 359
G + P+S C+NC EGH +++C + S+ +K
Sbjct: 1560 QEGHISKDCPNSQNSGGNKCFNCNQEGHMSKDCPNPSQKKK 1600
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK 221
+ G C+NC +EGHM+ +C + ++KK CF CG H R+C+K
Sbjct: 1573 NSGGNKCFNCNQEGHMSKDCPNPSQKKKGCFNCGEEGHQSRECTK 1617
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 22/84 (26%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
TC+ C +EGH++ +C ++ Q S CF C + GH +KDCP+
Sbjct: 1554 TCFKCKQEGHISKDCPNS------------------QNSGGNKCFNCNQEGHMSKDCPNP 1595
Query: 242 HKSGFQNAQVCLKCGDSGHDMFSC 265
Q + C CG+ GH C
Sbjct: 1596 S----QKKKGCFNCGEEGHQSREC 1615
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 13/113 (11%)
Query: 252 CLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVPGEVSCFRCGQL 309
C KCG GH C + C+ C GH+ C N G CF+CG+
Sbjct: 1451 CFKCGKVGHMAKDCTEPQQQGRKQSGACFKCNQEGHMSKDCPNQQQKKSG---CFKCGEE 1507
Query: 310 GHTGLHW-NSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVRKRN 361
GH N Q + RG +C+ CG EGH +++C + K +++N
Sbjct: 1508 GHFSKDCPNPQKQQQQKPRG-------GACFKCGEEGHISKDCPNPQKQQQKN 1553
>gi|146182859|ref|XP_001025435.2| Zinc knuckle family protein [Tetrahymena thermophila]
gi|146143687|gb|EAS05190.2| Zinc knuckle family protein [Tetrahymena thermophila SB210]
Length = 1748
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 83/188 (44%), Gaps = 28/188 (14%)
Query: 183 CYNCGEEGHMAVNC----RSAVKRKKPCFVCGSLEHGVRQCSKAQD----CFICKKGGHR 234
C+ CG+ GHMA +C + K+ CF C H + C Q CF C + GH
Sbjct: 1451 CFKCGKVGHMAKDCTEPQQQGRKQSGACFKCNQEGHMSKDCPNQQQKKSGCFKCGEEGHF 1510
Query: 235 AKDCPDKHKSGFQNAQ--VCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--C 290
+KDCP+ K Q + C KCG+ GH C N ++ C+ C+ GH+ C
Sbjct: 1511 SKDCPNPQKQQQQKPRGGACFKCGEEGHISKDCPNPQK--QQQKNTCFKCKQEGHISKDC 1568
Query: 291 VNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARE 350
N ++ G CF C Q GH C + +G C+NCG EGH +RE
Sbjct: 1569 PNSQNS--GGNKCFNCNQEGHMS---KDCPNPSQKKKG---------CFNCGEEGHQSRE 1614
Query: 351 CVSSSKVR 358
C K R
Sbjct: 1615 CTKERKER 1622
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 27/161 (16%)
Query: 220 SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQC 279
+K + CF C K GH AKDC + + G + + C KC GH C N K+ C
Sbjct: 1446 NKGKGCFKCGKVGHMAKDCTEPQQQGRKQSGACFKCNQEGHMSKDCPNQQQ----KKSGC 1501
Query: 280 YICRCFGHLC--CVNISDAVPGEV---SCFRCGQLGHTG---------LHWNSCMQACAR 325
+ C GH C N + +CF+CG+ GH N+C + +
Sbjct: 1502 FKCGEEGHFSKDCPNPQKQQQQKPRGGACFKCGEEGHISKDCPNPQKQQQKNTCFK--CK 1559
Query: 326 SRGETVEASPSS-------CYNCGAEGHFARECVSSSKVRK 359
G + P+S C+NC EGH +++C + S+ +K
Sbjct: 1560 QEGHISKDCPNSQNSGGNKCFNCNQEGHMSKDCPNPSQKKK 1600
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK 221
+ G C+NC +EGHM+ +C + ++KK CF CG H R+C+K
Sbjct: 1573 NSGGNKCFNCNQEGHMSKDCPNPSQKKKGCFNCGEEGHQSRECTK 1617
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 22/84 (26%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
TC+ C +EGH++ +C ++ Q S CF C + GH +KDCP+
Sbjct: 1554 TCFKCKQEGHISKDCPNS------------------QNSGGNKCFNCNQEGHMSKDCPNP 1595
Query: 242 HKSGFQNAQVCLKCGDSGHDMFSC 265
Q + C CG+ GH C
Sbjct: 1596 S----QKKKGCFNCGEEGHQSREC 1615
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 13/113 (11%)
Query: 252 CLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVPGEVSCFRCGQL 309
C KCG GH C + C+ C GH+ C N G CF+CG+
Sbjct: 1451 CFKCGKVGHMAKDCTEPQQQGRKQSGACFKCNQEGHMSKDCPNQQQKKSG---CFKCGEE 1507
Query: 310 GHTGLHW-NSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVRKRN 361
GH N Q + RG +C+ CG EGH +++C + K +++N
Sbjct: 1508 GHFSKDCPNPQKQQQQKPRG-------GACFKCGEEGHISKDCPNPQKQQQKN 1553
>gi|225707608|gb|ACO09650.1| Cellular nucleic acid-binding protein [Osmerus mordax]
Length = 165
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 86/181 (47%), Gaps = 40/181 (22%)
Query: 183 CYNCGEEGHMAVNCRSAVK----------RKKPCFVCGSLEHGVRQCSKAQD-CFICKKG 231
C+ CG GH NC +A + + C+ CG H R C +++D C+ C +
Sbjct: 9 CFGCGRSGHWIKNCPNAGGRGRGRGRGRGKDQFCYRCGEQGHMARDCEQSEDACYNCHRT 68
Query: 232 GHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCV 291
GH ++DC + K + QVC CG +GH C D E +CY C FGH+
Sbjct: 69 GHISRDCKEPKK---EREQVCYSCGKAGHVARDC------DHANEQKCYSCGGFGHI--- 116
Query: 292 NISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
+ +V C+RCG++GH +H C++S + +CYNCG GH A+EC
Sbjct: 117 ---QKLCDKVKCYRCGEIGHVAVH-------CSKS-------NEMNCYNCGKTGHLAKEC 159
Query: 352 V 352
Sbjct: 160 T 160
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CY+CG+ GH+A +C A ++K C+ CG H + C K + C+ C + GH
Sbjct: 77 EPKKEREQVCYSCGKAGHVARDCDHANEQK--CYSCGGFGHIQKLCDKVK-CYRCGEIGH 133
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGH 260
A C N C CG +GH
Sbjct: 134 VAVHCSK------SNEMNCYNCGKTGH 154
>gi|348502965|ref|XP_003439037.1| PREDICTED: cellular nucleic acid-binding protein-like [Oreochromis
niloticus]
Length = 166
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 85/182 (46%), Gaps = 41/182 (22%)
Query: 183 CYNCGEEGHMAVNCRSAVK-----------RKKPCFVCGSLEHGVRQCSKAQD-CFICKK 230
C+ CG GH +C +A ++ C+ CG H R C + +D C+ C +
Sbjct: 9 CFGCGRSGHWVKHCPNASGSRGRGRGRGRGKELFCYRCGDQGHMARDCDQTEDACYNCHR 68
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCC 290
GH ++DC + K + Q+C CG +GH C D E +CY C FGH+
Sbjct: 69 SGHISRDCKEPKK---EREQLCYTCGKAGHMARDC------DHANEQKCYSCGGFGHI-- 117
Query: 291 VNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARE 350
+ +V C+RCG++GH +H + +AS ++CYNCG GH A+E
Sbjct: 118 ----QKLCDKVKCYRCGEIGHVAVHCS--------------KASETNCYNCGKAGHLAKE 159
Query: 351 CV 352
C
Sbjct: 160 CT 161
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 18/115 (15%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGH 233
D+ CYNC GH++ +C+ K R++ C+ CG H R C A Q C+ C GH
Sbjct: 57 DQTEDACYNCHRSGHISRDCKEPKKEREQLCYTCGKAGHMARDCDHANEQKCYSCGGFGH 116
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
K C DK K C +CG+ GH C + E CY C GHL
Sbjct: 117 IQKLC-DKVK--------CYRCGEIGHVAVHCSKA------SETNCYNCGKAGHL 156
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CY CG+ GHMA +C A ++K C+ CG H + C K + C+ C + GH
Sbjct: 78 EPKKEREQLCYTCGKAGHMARDCDHANEQK--CYSCGGFGHIQKLCDKVK-CYRCGEIGH 134
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGH 260
A C ++ C CG +GH
Sbjct: 135 VAVHCSKASETN------CYNCGKAGH 155
>gi|432865749|ref|XP_004070594.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 1
[Oryzias latipes]
gi|432865751|ref|XP_004070595.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 2
[Oryzias latipes]
Length = 166
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 85/182 (46%), Gaps = 41/182 (22%)
Query: 183 CYNCGEEGHMAVNCRSA-----------VKRKKPCFVCGSLEHGVRQCSKAQD-CFICKK 230
C+ CG GH +C +A ++ C+ CG H R C + +D C+ C +
Sbjct: 9 CFGCGRPGHWVKHCPNASGTRGRGRGRGRGKELFCYRCGDQGHMARDCDQTEDACYNCHR 68
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCC 290
GH ++DC + K + Q+C CG +GH C D E +CY C FGH+
Sbjct: 69 SGHISRDCKEPKK---EREQLCYTCGKAGHMARDC------DHANEQKCYSCGGFGHI-- 117
Query: 291 VNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARE 350
+ +V C+RCG++GH +H + +AS ++CYNCG GH A+E
Sbjct: 118 ----QKLCDKVKCYRCGEIGHVAVHCS--------------KASETNCYNCGKAGHLAKE 159
Query: 351 CV 352
C
Sbjct: 160 CT 161
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 18/115 (15%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGH 233
D+ CYNC GH++ +C+ K R++ C+ CG H R C A Q C+ C GH
Sbjct: 57 DQTEDACYNCHRSGHISRDCKEPKKEREQLCYTCGKAGHMARDCDHANEQKCYSCGGFGH 116
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
K C DK K C +CG+ GH C + E CY C GHL
Sbjct: 117 IQKLC-DKVK--------CYRCGEIGHVAVHCSKA------SETNCYNCGKAGHL 156
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CY CG+ GHMA +C A ++K C+ CG H + C K + C+ C + GH
Sbjct: 78 EPKKEREQLCYTCGKAGHMARDCDHANEQK--CYSCGGFGHIQKLCDKVK-CYRCGEIGH 134
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGH 260
A C ++ C CG +GH
Sbjct: 135 VAVHCSKASETN------CYNCGKAGH 155
>gi|432865753|ref|XP_004070596.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 3
[Oryzias latipes]
Length = 164
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 84/180 (46%), Gaps = 39/180 (21%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP---------CFVCGSLEHGVRQCSKAQD-CFICKKGG 232
C+ CG GH +C +A + C+ CG H R C + +D C+ C + G
Sbjct: 9 CFGCGRPGHWVKHCPNASGTRGRGRGRGRELFCYRCGDQGHMARDCDQTEDACYNCHRSG 68
Query: 233 HRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVN 292
H ++DC + K + Q+C CG +GH C D E +CY C FGH+
Sbjct: 69 HISRDCKEPKK---EREQLCYTCGKAGHMARDC------DHANEQKCYSCGGFGHI---- 115
Query: 293 ISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECV 352
+ +V C+RCG++GH +H + +AS ++CYNCG GH A+EC
Sbjct: 116 --QKLCDKVKCYRCGEIGHVAVHCS--------------KASETNCYNCGKAGHLAKECT 159
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 18/115 (15%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGH 233
D+ CYNC GH++ +C+ K R++ C+ CG H R C A Q C+ C GH
Sbjct: 55 DQTEDACYNCHRSGHISRDCKEPKKEREQLCYTCGKAGHMARDCDHANEQKCYSCGGFGH 114
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
K C DK K C +CG+ GH C + E CY C GHL
Sbjct: 115 IQKLC-DKVK--------CYRCGEIGHVAVHCSKA------SETNCYNCGKAGHL 154
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CY CG+ GHMA +C A ++K C+ CG H + C K + C+ C + GH
Sbjct: 76 EPKKEREQLCYTCGKAGHMARDCDHANEQK--CYSCGGFGHIQKLCDKVK-CYRCGEIGH 132
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGH 260
A C ++ C CG +GH
Sbjct: 133 VAVHCSKASETN------CYNCGKAGH 153
>gi|189524881|ref|XP_001922882.1| PREDICTED: cellular nucleic acid-binding protein isoform 1 [Danio
rerio]
gi|189524883|ref|XP_001922883.1| PREDICTED: cellular nucleic acid-binding protein isoform 2 [Danio
rerio]
gi|326671493|ref|XP_003199446.1| PREDICTED: cellular nucleic acid-binding protein [Danio rerio]
gi|326671495|ref|XP_003199447.1| PREDICTED: cellular nucleic acid-binding protein [Danio rerio]
Length = 161
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 83/180 (46%), Gaps = 39/180 (21%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP---------CFVCGSLEHGVRQCSKAQD-CFICKKGG 232
C+ CG GH NC +A + + C+ CG H R C + +D C+ C +GG
Sbjct: 6 CFGCGRTGHWIKNCPNAGRGRGKGRGRGKDLFCYRCGEPGHVARDCERTEDACYNCGRGG 65
Query: 233 HRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVN 292
H ++DC + K + QVC CG +GH C D E +CY C FGH+
Sbjct: 66 HISRDCKEPKK---EREQVCYNCGKAGHMARDC------DHANEQKCYSCGGFGHI---- 112
Query: 293 ISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECV 352
+V C+RCG++GH + + +AS +CYNCG GH A+EC
Sbjct: 113 --QKGCEKVKCYRCGEIGHVAV--------------QCSKASEVNCYNCGKSGHVAKECT 156
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 18/83 (21%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKR----------------KKPCFVCGSLEHGVR 217
+P Q CYNCG+ GHMA +C A ++ K C+ CG + H
Sbjct: 73 EPKKEREQVCYNCGKAGHMARDCDHANEQKCYSCGGFGHIQKGCEKVKCYRCGEIGHVAV 132
Query: 218 QCSKAQD--CFICKKGGHRAKDC 238
QCSKA + C+ C K GH AK+C
Sbjct: 133 QCSKASEVNCYNCGKSGHVAKEC 155
>gi|58802483|gb|AAW82446.1| cellular nucleic acid-binding protein [Carassius gibelio]
Length = 163
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 83/186 (44%), Gaps = 39/186 (20%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVKRKKP---------CFVCGSLEHGVRQCSKAQD-CF 226
D C+ CG GH NC +A + + C+ CG H R C + +D C+
Sbjct: 2 DMSTSECFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDACY 61
Query: 227 ICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFG 286
C + GH ++DC + K + Q C CG +GH C D E +CY C FG
Sbjct: 62 NCHRSGHISRDCKEPKK---EREQSCYNCGKAGHVARDC------DHGNEQKCYSCGGFG 112
Query: 287 HLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGH 346
H+ + +V C+RCG++GH + + +A+ +CYNCG GH
Sbjct: 113 HI------QKLCDKVKCYRCGEIGHVAV--------------QCSKATEVNCYNCGKTGH 152
Query: 347 FARECV 352
AREC
Sbjct: 153 LARECT 158
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 18/83 (21%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKR----------------KKPCFVCGSLEHGVR 217
+P Q+CYNCG+ GH+A +C ++ K C+ CG + H
Sbjct: 75 EPKKEREQSCYNCGKAGHVARDCDHGNEQKCYSCGGFGHIQKLCDKVKCYRCGEIGHVAV 134
Query: 218 QCSKAQD--CFICKKGGHRAKDC 238
QCSKA + C+ C K GH A++C
Sbjct: 135 QCSKATEVNCYNCGKTGHLAREC 157
>gi|401420042|ref|XP_003874510.1| putative universal minicircle sequence binding protein (UMSBP)
[Leishmania mexicana MHOM/GT/2001/U1103]
gi|322490746|emb|CBZ26010.1| putative universal minicircle sequence binding protein (UMSBP)
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 298
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 91/212 (42%), Gaps = 37/212 (17%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD---------- 224
G TC+ CGE GHM+ +C ++ K+ C+ CG H R C +Q
Sbjct: 68 GAMTCFRCGEAGHMSRDCPNSAKQGAAKGFECYKCGQEGHLSRDCPSSQGGSRGGYGQKR 127
Query: 225 --------------CFICKKGGHRAKDCPDKHKSGFQNA--QVCLKCGDSGHDMFSCRNS 268
C+ C GH ++DCP+ + G+ A + C KCGD+GH C N
Sbjct: 128 GRNGAQGGYGGDRACYKCGDAGHISRDCPNG-QGGYSGAGDRTCYKCGDAGHISRDCPNG 186
Query: 269 YS-LDDLKEVQCYICRCFGHLC--CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACAR 325
+ +CY C GH+ C + G+ +C++CG+ GH C +A
Sbjct: 187 QGGYSGAGDRKCYKCGESGHISRECPSAGSTGSGDRTCYKCGKPGHI---SRECPEAGGS 243
Query: 326 SRGETVEASPSSCYNCGAEGHFARECVSSSKV 357
G S +CY CG GH +REC S+
Sbjct: 244 YGGSRGGGSDRTCYKCGEAGHMSRECPSAGGT 275
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 82/207 (39%), Gaps = 39/207 (18%)
Query: 183 CYNCGEEGHMAVNCRSA----VKRKKPCFVCGSLEHGVRQC--------SKAQDCFICKK 230
C NCG+EGH A C A +R CF CG H R+C + A CF C +
Sbjct: 18 CRNCGKEGHYARECPEADSKGDERSSTCFRCGEEGHMSRECPNEARSGAAGAMTCFRCGE 77
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC----------------RNSYSLDDL 274
GH ++DCP+ K G C KCG GH C RN
Sbjct: 78 AGHMSRDCPNSAKQGAAKGFECYKCGQEGHLSRDCPSSQGGSRGGYGQKRGRNGAQGGYG 137
Query: 275 KEVQCYICRCFGHLC--CVNISDAV--PGEVSCFRCGQLGHTGLHWNSCMQACARSRGET 330
+ CY C GH+ C N G+ +C++CG GH + C +G
Sbjct: 138 GDRACYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHI-------SRDCPNGQGGY 190
Query: 331 VEASPSSCYNCGAEGHFARECVSSSKV 357
A CY CG GH +REC S+
Sbjct: 191 SGAGDRKCYKCGESGHISRECPSAGST 217
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 83/203 (40%), Gaps = 42/203 (20%)
Query: 182 TCYNCGEEGHMAVNC----RSAVKRKKPCFVCGSLEHGVRQC--------SKAQDCFICK 229
TC+ CGEEGHM+ C RS CF CG H R C +K +C+ C
Sbjct: 44 TCFRCGEEGHMSRECPNEARSGAAGAMTCFRCGEAGHMSRDCPNSAKQGAAKGFECYKCG 103
Query: 230 KGGHRAKDCPDKH----------------KSGFQNAQVCLKCGDSGHDMFSCRNSY-SLD 272
+ GH ++DCP + G+ + C KCGD+GH C N
Sbjct: 104 QEGHLSRDCPSSQGGSRGGYGQKRGRNGAQGGYGGDRACYKCGDAGHISRDCPNGQGGYS 163
Query: 273 DLKEVQCYICRCFGHLC--CVNISDAV--PGEVSCFRCGQLGHTGLHWNSCMQACARSRG 328
+ CY C GH+ C N G+ C++CG+ GH C A + G
Sbjct: 164 GAGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRKCYKCGESGHI---SRECPSAGSTGSG 220
Query: 329 ETVEASPSSCYNCGAEGHFAREC 351
+ CY CG GH +REC
Sbjct: 221 DRT------CYKCGKPGHISREC 237
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 17/106 (16%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVKRK---KPCFVCGSLEHGVRQCSKA------------- 222
G + CY CGE GH++ C SA + C+ CG H R+C +A
Sbjct: 194 GDRKCYKCGESGHISRECPSAGSTGSGDRTCYKCGKPGHISRECPEAGGSYGGSRGGGSD 253
Query: 223 QDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNS 268
+ C+ C + GH +++CP +G + + C KCG++GH C +S
Sbjct: 254 RTCYKCGEAGHMSRECPSAGGTGSGD-RACYKCGEAGHISRDCPSS 298
>gi|347921162|ref|NP_001231665.1| zinc finger protein 9 [Danio rerio]
gi|347921635|ref|NP_956043.2| zinc finger protein 9 [Danio rerio]
Length = 163
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 83/185 (44%), Gaps = 39/185 (21%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVKRKKP---------CFVCGSLEHGVRQCSKAQD-CF 226
D C+ CG GH NC +A + + C+ CG H R C + +D C+
Sbjct: 2 DMSTSECFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDACY 61
Query: 227 ICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFG 286
C + GH ++DC + K + Q C CG +GH C D E +CY C FG
Sbjct: 62 NCHRSGHISRDCKEPKK---EREQCCYNCGKAGHVARDC------DHANEQKCYSCGGFG 112
Query: 287 HLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGH 346
H+ + +V C+RCG++GH + + +A+ +CYNCG GH
Sbjct: 113 HI------QKLCDKVKCYRCGEIGHVAV--------------QCSKATEVNCYNCGKTGH 152
Query: 347 FAREC 351
AR+C
Sbjct: 153 LARDC 157
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 18/83 (21%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKR----------------KKPCFVCGSLEHGVR 217
+P Q CYNCG+ GH+A +C A ++ K C+ CG + H
Sbjct: 75 EPKKEREQCCYNCGKAGHVARDCDHANEQKCYSCGGFGHIQKLCDKVKCYRCGEIGHVAV 134
Query: 218 QCSKAQD--CFICKKGGHRAKDC 238
QCSKA + C+ C K GH A+DC
Sbjct: 135 QCSKATEVNCYNCGKTGHLARDC 157
>gi|729704|sp|Q04832.1|HEXP_LEIMA RecName: Full=DNA-binding protein HEXBP; AltName:
Full=Hexamer-binding protein
gi|159342|gb|AAA29245.1| HEXBP DNA binding protein [Leishmania major]
Length = 271
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 84/208 (40%), Gaps = 39/208 (18%)
Query: 182 TCYNCGEEGHMAVNCRSAV----KRKKPCFVCGSLEHGVRQC--------SKAQDCFICK 229
+C NCG+EGH A C A +R CF CG H R+C + A CF C
Sbjct: 17 SCRNCGKEGHYARECPEADSKGDERSTTCFRCGEEGHMSRECPNEARSGAAGAMTCFRCG 76
Query: 230 KGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC-------RNSYSLDDLK------- 275
+ GH ++DCP+ K G C KCG GH C R Y +
Sbjct: 77 EAGHMSRDCPNSAKPGAAKGFECYKCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGY 136
Query: 276 --EVQCYICRCFGHLC--CVNISDAV--PGEVSCFRCGQLGHTGLHWNSCMQACARSRGE 329
+ CY C GH+ C N G+ +C++CG GH + C +G
Sbjct: 137 SGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHI-------SRDCPNGQGG 189
Query: 330 TVEASPSSCYNCGAEGHFARECVSSSKV 357
A CY CG GH +REC S+
Sbjct: 190 YSGAGDRKCYKCGESGHMSRECPSAGST 217
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 92/209 (44%), Gaps = 38/209 (18%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVK----RKKPCFVCGSLEHGVRQCSKAQD---------- 224
G TC+ CGE GHM+ +C ++ K + C+ CG H R C +Q
Sbjct: 68 GAMTCFRCGEAGHMSRDCPNSAKPGAAKGFECYKCGQEGHLSRDCPSSQGGSRGGYGQKR 127
Query: 225 --------------CFICKKGGHRAKDCPDKHKSGFQNA--QVCLKCGDSGHDMFSCRNS 268
C+ C GH ++DCP+ + G+ A + C KCGD+GH C N
Sbjct: 128 GRSGAQGGYSGDRTCYKCGDAGHISRDCPNG-QGGYSGAGDRTCYKCGDAGHISRDCPNG 186
Query: 269 Y-SLDDLKEVQCYICRCFGHLC--CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACAR 325
+ +CY C GH+ C + G+ +C++CG+ GH C +A
Sbjct: 187 QGGYSGAGDRKCYKCGESGHMSRECPSAGSTGSGDRACYKCGKPGHI---SRECPEA-GG 242
Query: 326 SRGETVEASPSSCYNCGAEGHFARECVSS 354
S G + +CY CG GH +R+C SS
Sbjct: 243 SYGGSRGGGDRTCYKCGEAGHISRDCPSS 271
>gi|34784873|gb|AAH56793.1| Zinc finger protein 9 [Danio rerio]
Length = 161
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 82/179 (45%), Gaps = 39/179 (21%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP---------CFVCGSLEHGVRQCSKAQD-CFICKKGG 232
C+ CG GH NC +A + + C+ CG H R C + +D C+ C + G
Sbjct: 6 CFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDACYNCHRSG 65
Query: 233 HRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVN 292
H ++DC + K + Q C CG +GH C D E +CY C FGH+
Sbjct: 66 HISRDCKEPKK---EREQCCYNCGKAGHVARDC------DHANEQKCYSCGGFGHI---- 112
Query: 293 ISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
+ +V C+RCG++GH + + +A+ +CYNCG GH AR+C
Sbjct: 113 --QKLCDKVKCYRCGEIGHVAV--------------QCSKATEVNCYNCGKTGHLARDC 155
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 18/83 (21%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKR----------------KKPCFVCGSLEHGVR 217
+P Q CYNCG+ GH+A +C A ++ K C+ CG + H
Sbjct: 73 EPKKEREQCCYNCGKAGHVARDCDHANEQKCYSCGGFGHIQKLCDKVKCYRCGEIGHVAV 132
Query: 218 QCSKAQD--CFICKKGGHRAKDC 238
QCSKA + C+ C K GH A+DC
Sbjct: 133 QCSKATEVNCYNCGKTGHLARDC 155
>gi|189303765|gb|ACD85807.1| cellular nucleic acid-binding protein [Ctenopharyngodon idella]
Length = 163
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 82/186 (44%), Gaps = 39/186 (20%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVKRKKP---------CFVCGSLEHGVRQCSKAQD-CF 226
D C CG GH NC +A + + C+ CG H R C + +D C+
Sbjct: 2 DMSTSECSGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDACY 61
Query: 227 ICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFG 286
C + GH ++DC + K + Q C CG +GH C D E +CY C FG
Sbjct: 62 NCHRSGHISRDCKEPKK---EREQCCYNCGKAGHVARDC------DHANEQKCYSCGGFG 112
Query: 287 HLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGH 346
H+ + +V C+RCG++GH + + +A+ +CYNCG GH
Sbjct: 113 HI------QKLCDKVKCYRCGEIGHVAV--------------QCSKATEVNCYNCGKTGH 152
Query: 347 FARECV 352
AREC
Sbjct: 153 LARECT 158
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 18/83 (21%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKR----------------KKPCFVCGSLEHGVR 217
+P Q CYNCG+ GH+A +C A ++ K C+ CG + H
Sbjct: 75 EPKKEREQCCYNCGKAGHVARDCDHANEQKCYSCGGFGHIQKLCDKVKCYRCGEIGHVAV 134
Query: 218 QCSKAQD--CFICKKGGHRAKDC 238
QCSKA + C+ C K GH A++C
Sbjct: 135 QCSKATEVNCYNCGKTGHLAREC 157
>gi|157876792|ref|XP_001686738.1| putative universal minicircle sequence binding protein [Leishmania
major strain Friedlin]
gi|68129813|emb|CAJ09119.1| putative universal minicircle sequence binding protein [Leishmania
major strain Friedlin]
Length = 271
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 84/208 (40%), Gaps = 39/208 (18%)
Query: 182 TCYNCGEEGHMAVNCRSAV----KRKKPCFVCGSLEHGVRQC--------SKAQDCFICK 229
+C NCG+EGH A C A +R CF CG H R+C + A CF C
Sbjct: 17 SCRNCGKEGHYARECPEADSKGDERSTTCFRCGEEGHMSRECPNEARSGAAGAMTCFRCG 76
Query: 230 KGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC-------RNSYSLDDLK------- 275
+ GH ++DCP+ K G C KCG GH C R Y +
Sbjct: 77 EAGHMSRDCPNSAKPGAAKGFECYKCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGY 136
Query: 276 --EVQCYICRCFGHLC--CVNISDAV--PGEVSCFRCGQLGHTGLHWNSCMQACARSRGE 329
+ CY C GH+ C N G+ +C++CG GH + C +G
Sbjct: 137 SGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHI-------SRDCPNGQGG 189
Query: 330 TVEASPSSCYNCGAEGHFARECVSSSKV 357
A CY CG GH +REC S+
Sbjct: 190 YSGAGDRKCYKCGESGHMSRECPSAGST 217
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 91/209 (43%), Gaps = 38/209 (18%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVK----RKKPCFVCGSLEHGVRQCSKAQD---------- 224
G TC+ CGE GHM+ +C ++ K + C+ CG H R C +Q
Sbjct: 68 GAMTCFRCGEAGHMSRDCPNSAKPGAAKGFECYKCGQEGHLSRDCPSSQGGSRGGYGQKR 127
Query: 225 --------------CFICKKGGHRAKDCPDKHKSGFQNA--QVCLKCGDSGHDMFSCRNS 268
C+ C GH ++DCP+ + G+ A + C KCGD+GH C N
Sbjct: 128 GRSGAQGGYSGDRTCYKCGDAGHISRDCPNG-QGGYSGAGDRTCYKCGDAGHISRDCPNG 186
Query: 269 Y-SLDDLKEVQCYICRCFGHLC--CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACAR 325
+ +CY C GH+ C + + +C++CG+ GH C +A
Sbjct: 187 QGGYSGAGDRKCYKCGESGHMSRECPSAGSTGSSDRACYKCGKPGHI---SRECPEA-GG 242
Query: 326 SRGETVEASPSSCYNCGAEGHFARECVSS 354
S G + +CY CG GH +R+C SS
Sbjct: 243 SYGGSRGGGDRTCYKCGEAGHISRDCPSS 271
>gi|254210302|gb|AAO73520.2| cellular nucleic acid-binding protein [Danio rerio]
Length = 163
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 82/185 (44%), Gaps = 39/185 (21%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVKRKKP---------CFVCGSLEHGVRQCSKAQD-CF 226
D C+ CG GH NC +A + + C+ CG H R C + +D C+
Sbjct: 2 DMSTSECFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDACY 61
Query: 227 ICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFG 286
C + GH ++DC + K + Q C CG +GH C D E +CY C FG
Sbjct: 62 NCHRSGHISRDCKEPKK---EREQCCYNCGKAGHVARDC------DHANEQKCYSCGGFG 112
Query: 287 HLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGH 346
H + +V C+RCG++GH + + +A+ +CYNCG GH
Sbjct: 113 HF------QKLCDKVKCYRCGEIGHVAV--------------QCSKATEVNCYNCGKTGH 152
Query: 347 FAREC 351
AR+C
Sbjct: 153 LARDC 157
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 18/83 (21%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKR----------------KKPCFVCGSLEHGVR 217
+P Q CYNCG+ GH+A +C A ++ K C+ CG + H
Sbjct: 75 EPKKEREQCCYNCGKAGHVARDCDHANEQKCYSCGGFGHFQKLCDKVKCYRCGEIGHVAV 134
Query: 218 QCSKAQD--CFICKKGGHRAKDC 238
QCSKA + C+ C K GH A+DC
Sbjct: 135 QCSKATEVNCYNCGKTGHLARDC 157
>gi|154345732|ref|XP_001568803.1| putative universal minicircle sequence binding protein (UMSBP)
[Leishmania braziliensis MHOM/BR/75/M2904]
gi|134066145|emb|CAM43935.1| putative universal minicircle sequence binding protein (UMSBP)
[Leishmania braziliensis MHOM/BR/75/M2904]
Length = 276
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 83/201 (41%), Gaps = 39/201 (19%)
Query: 183 CYNCGEEGHMAVNCRSAV----KRKKPCFVCGSLEHGVRQC--------SKAQDCFICKK 230
C NCG+EGH A C A +R CF CG H R+C + A CF C +
Sbjct: 18 CRNCGKEGHYARECPEADAKGDERSTTCFRCGEAGHMSRECPNEAKSGAAGAMACFRCGE 77
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLK--------------- 275
GH ++DCP+ K G C KCG GH C +S
Sbjct: 78 AGHMSRDCPNSAKPGAAKGFECYKCGQEGHLSRDCPSSQGGGRGGYGQKRGRNGAQGGYG 137
Query: 276 -EVQCYICRCFGHLC--CVNISDAV--PGEVSCFRCGQLGHTGLHWNSCMQACARSRGET 330
+ CY C GH+ C N G+ +C++CG+ GH + C S+G
Sbjct: 138 GDRTCYKCGDAGHISRDCPNSQGGYSGAGDRTCYKCGESGHI-------SRDCPNSQGGY 190
Query: 331 VEASPSSCYNCGAEGHFAREC 351
A +CY CG GH +REC
Sbjct: 191 SGAGDRTCYKCGKPGHMSREC 211
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 86/203 (42%), Gaps = 37/203 (18%)
Query: 182 TCYNCGEEGHMAVNC----RSAVKRKKPCFVCGSLEHGVRQC--------SKAQDCFICK 229
TC+ CGE GHM+ C +S CF CG H R C +K +C+ C
Sbjct: 44 TCFRCGEAGHMSRECPNEAKSGAAGAMACFRCGEAGHMSRDCPNSAKPGAAKGFECYKCG 103
Query: 230 KGGHRAKDCPDKH----------------KSGFQNAQVCLKCGDSGHDMFSCRNSY-SLD 272
+ GH ++DCP + G+ + C KCGD+GH C NS
Sbjct: 104 QEGHLSRDCPSSQGGGRGGYGQKRGRNGAQGGYGGDRTCYKCGDAGHISRDCPNSQGGYS 163
Query: 273 DLKEVQCYICRCFGHLC--CVNISDAV--PGEVSCFRCGQLGHTGLHWNSCMQACARSRG 328
+ CY C GH+ C N G+ +C++CG+ GH C +A S G
Sbjct: 164 GAGDRTCYKCGESGHISRDCPNSQGGYSGAGDRTCYKCGKPGHM---SRECPEA-GGSYG 219
Query: 329 ETVEASPSSCYNCGAEGHFAREC 351
+ +CY CG GH +REC
Sbjct: 220 GSRGGGDRTCYKCGKPGHMSREC 242
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 21/111 (18%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAV-----KRKKPCFVCGSLEHGVRQCSKA----------- 222
G +TCY CGE GH++ +C ++ + C+ CG H R+C +A
Sbjct: 166 GDRTCYKCGESGHISRDCPNSQGGYSGAGDRTCYKCGKPGHMSRECPEAGGSYGGSRGGG 225
Query: 223 -QDCFICKKGGHRAKDCPDKHKSGFQNA----QVCLKCGDSGHDMFSCRNS 268
+ C+ C K GH +++CP+ S + + C KCGDSGH C +S
Sbjct: 226 DRTCYKCGKPGHMSRECPEAGGSYGGSRGGGDRTCYKCGDSGHISRDCPSS 276
>gi|146104187|ref|XP_001469754.1| putative universal minicircle sequence binding protein (UMSBP)
[Leishmania infantum JPCM5]
gi|398024252|ref|XP_003865287.1| universal minicircle sequence binding protein (UMSBP), putative
[Leishmania donovani]
gi|134074124|emb|CAM72866.1| putative universal minicircle sequence binding protein (UMSBP)
[Leishmania infantum JPCM5]
gi|322503524|emb|CBZ38610.1| universal minicircle sequence binding protein (UMSBP), putative
[Leishmania donovani]
Length = 271
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 82/205 (40%), Gaps = 39/205 (19%)
Query: 182 TCYNCGEEGHMAVNCRSAVK----RKKPCFVCGSLEHGVRQC--------SKAQDCFICK 229
+C NCG+EGH A C A R CF CG H R+C + A CF C
Sbjct: 17 SCRNCGKEGHYARECPEADSKGDGRSTTCFRCGEEGHMTRECPNEARSGAAGAMTCFRCG 76
Query: 230 KGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC-------RNSYSLDDLK------- 275
+ GH ++DCP+ K G C CG GH C R Y +
Sbjct: 77 EAGHMSRDCPNSAKPGAAKGFECYNCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGY 136
Query: 276 --EVQCYICRCFGHLC--CVNISDAV--PGEVSCFRCGQLGHTGLHWNSCMQACARSRGE 329
+ CY C GH+ C N G+ +C++CG GH + C +G
Sbjct: 137 GGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHI-------SRDCPNGQGG 189
Query: 330 TVEASPSSCYNCGAEGHFARECVSS 354
A CY CG GH +REC S+
Sbjct: 190 YSGAGDRKCYKCGESGHMSRECPSA 214
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 92/209 (44%), Gaps = 38/209 (18%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVK----RKKPCFVCGSLEHGVRQCSKAQD---------- 224
G TC+ CGE GHM+ +C ++ K + C+ CG H R C +Q
Sbjct: 68 GAMTCFRCGEAGHMSRDCPNSAKPGAAKGFECYNCGQEGHLSRDCPSSQGGSRGGYGQKR 127
Query: 225 --------------CFICKKGGHRAKDCPDKHKSGFQNA--QVCLKCGDSGHDMFSCRNS 268
C+ C GH ++DCP+ + G+ A + C KCGD+GH C N
Sbjct: 128 GRSGAQGGYGGDRTCYKCGDAGHISRDCPNG-QGGYSGAGDRTCYKCGDAGHISRDCPNG 186
Query: 269 Y-SLDDLKEVQCYICRCFGHLC--CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACAR 325
+ +CY C GH+ C + G+ +C++CG+ GH C +A
Sbjct: 187 QGGYSGAGDRKCYKCGESGHMSRECPSAGSNGSGDRTCYKCGKPGHI---SRECPEA-GG 242
Query: 326 SRGETVEASPSSCYNCGAEGHFARECVSS 354
S G + +CY CG GH +R+C SS
Sbjct: 243 SYGGSRGGGDRTCYKCGEAGHISRDCPSS 271
>gi|301106623|ref|XP_002902394.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098268|gb|EEY56320.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 443
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 20/175 (11%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C++CGE GHMA C + K + PC+ C H +C C C++ GH+ +DC ++
Sbjct: 163 CFHCGEVGHMATVCMND-KLQLPCYYCALRGHQAWECPNLP-CGNCRQLGHQERDCDNRR 220
Query: 243 KSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVS 302
S C CG GH C N +++ +V C +C GHL CV I V
Sbjct: 221 LS----IDPCGVCGRPGHIDVDCDN---VEEPAQVTCMVCTEVGHLHCVPIPPPADRSVY 273
Query: 303 CFRCGQLGHTGLHWNSCMQ------ACARSRGETVEASPSSCYNCGAEGHFAREC 351
C CG+ HT ++ ++ A + G TV+ +C+ C GH A EC
Sbjct: 274 CPNCGE-NHTLDRCDTYLEPTVTNFATRTASGRTVQ----TCFVCNEAGHIAAEC 323
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 39/106 (36%), Gaps = 20/106 (18%)
Query: 182 TCYNCGEEGHM-AVNCRSAVKRKKPCFVCGSLEHGVRQCSK------------------A 222
TC C E GH+ V R C CG H + +C
Sbjct: 249 TCMVCTEVGHLHCVPIPPPADRSVYCPNCGE-NHTLDRCDTYLEPTVTNFATRTASGRTV 307
Query: 223 QDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNS 268
Q CF+C + GH A +CP + + C KCG GH C +S
Sbjct: 308 QTCFVCNEAGHIAAECPVRSNGYTRGGGSCFKCGKPGHFAADCYDS 353
>gi|348540577|ref|XP_003457764.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 1
[Oreochromis niloticus]
Length = 161
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 39/180 (21%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP---------CFVCGSLEHGVRQCSKAQD-CFICKKGG 232
C+ CG GH NC S + + C+ CG L H R C + +D C+ C +
Sbjct: 6 CFGCGHSGHWVKNCPSGGRGRGKGRGRGKDLFCYRCGELGHVARDCERTEDACYNCGRED 65
Query: 233 HRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVN 292
H ++DC + K + Q+C CG +GH +C +++ E +CY C FGH+
Sbjct: 66 HISRDCKEPKK---EREQLCYNCGKAGHMARNCNHAH------EQKCYSCGSFGHI---- 112
Query: 293 ISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECV 352
+V C+RCG++GH +H + +AS +CYN G GH A+EC
Sbjct: 113 --QKCCEKVKCYRCGEIGHVAVHCS--------------KASELNCYNYGKSGHLAKECT 156
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GHMA NC A ++K C+ CGS H +++C + C+ C + GH
Sbjct: 73 EPKKEREQLCYNCGKAGHMARNCNHAHEQK--CYSCGSFGH-IQKCCEKVKCYRCGEIGH 129
Query: 234 RAKDC 238
A C
Sbjct: 130 VAVHC 134
>gi|297263145|ref|XP_001093980.2| PREDICTED: hypothetical protein LOC705622 [Macaca mulatta]
Length = 343
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 80/189 (42%), Gaps = 48/189 (25%)
Query: 183 CYNCGEEGHMAVNCRSA----------------VKRKKP--CFVCGSLEHGVRQCSKAQD 224
C+ CG GH A C + V P C+ CG H + C +D
Sbjct: 179 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 238
Query: 225 -CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICR 283
C+ C +GGH AKDC + + + Q C CG GH C D E +CY C
Sbjct: 239 ACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSCG 289
Query: 284 CFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGA 343
FGH+ D +V C+RCG+ GH ++ C+++ S +CY CG
Sbjct: 290 EFGHI----QKDCT--KVKCYRCGETGHVAIN-------CSKT-------SEVNCYRCGE 329
Query: 344 EGHFARECV 352
GH AREC
Sbjct: 330 SGHLARECT 338
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KDC
Sbjct: 239 ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDC 298
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CG++GH +C + EV CY C GHL
Sbjct: 299 ---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 333
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH A +C
Sbjct: 262 QCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGHVAINC-- 316
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSC 265
K+ N C +CG+SGH C
Sbjct: 317 -SKTSEVN---CYRCGESGHLAREC 337
>gi|427788709|gb|JAA59806.1| Putative protein self-association [Rhipicephalus pulchellus]
Length = 856
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 90/203 (44%), Gaps = 26/203 (12%)
Query: 179 GWQTCYNCGEEGHMAVNCRSA-----VKRKKPCFVCGSLEHGVRQCSKA----------- 222
G + C+ C +EGHM+ +C +A R + CF CG H R C A
Sbjct: 173 GGRACFKCNQEGHMSRDCPNADSGGGGGRGRGCFKCGEEGHMSRDCPNADSSSGGGRSGG 232
Query: 223 QDCFICKKGGHRAKDCP--DKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCY 280
+ CF C + GH ++DCP D G + C KCG+ GH C + S DD + C+
Sbjct: 233 RGCFKCGQEGHMSRDCPNSDSSGGGGGGGRGCFKCGEEGHMSRDCPTASS-DDRPKRGCF 291
Query: 281 ICRCFGHLC--CVNISDAVPGEVSCFRCGQLGHTG---LHWNSCMQACARSRGETVEASP 335
C GH+ C N + CF+CG+ GH + ++ + GE + P
Sbjct: 292 NCGEDGHMSRDCPNPQQERRSK-GCFKCGEEGHMSRDCPNPDAGGGRGGDTSGEGGD-RP 349
Query: 336 SSCYNCGAEGHFARECVSSSKVR 358
C+ C EGH A++C + R
Sbjct: 350 RGCFKCQQEGHMAKDCTNEPVPR 372
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 23/85 (27%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAV--KRKKPCFVCGSLEHGVRQCS----------- 220
D P RG C+NCGE+GHM+ +C + +R K CF CG H R C
Sbjct: 284 DRPKRG---CFNCGEDGHMSRDCPNPQQERRSKGCFKCGEEGHMSRDCPNPDAGGGRGGD 340
Query: 221 -------KAQDCFICKKGGHRAKDC 238
+ + CF C++ GH AKDC
Sbjct: 341 TSGEGGDRPRGCFKCQQEGHMAKDC 365
>gi|47223220|emb|CAG11355.1| unnamed protein product [Tetraodon nigroviridis]
Length = 167
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 82/183 (44%), Gaps = 42/183 (22%)
Query: 183 CYNCGEEGHMAVNCRSA------------VKRKKPCFVCGSLEHGVRQCSKAQD-CFICK 229
C+ CG GH NC ++ ++ C+ CG H V+ C + +D C+ C
Sbjct: 9 CFGCGRPGHWVKNCPTSSGLRGRGPRGRGRGKELFCYRCGDQGHMVKDCDQTEDSCYNCH 68
Query: 230 KGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC 289
K GH ++DC + + + Q C CG +GH C D E +C+ C GH+
Sbjct: 69 KSGHISRDCKEPKR---EREQQCYNCGKAGHMAREC------DHANEQKCFTCGTLGHI- 118
Query: 290 CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAR 349
+ +V C+RCG +GH L + +AS ++CYNCG GH A+
Sbjct: 119 -----QKLCDKVKCYRCGGIGHVAL--------------QCSKASETTCYNCGKAGHVAK 159
Query: 350 ECV 352
+C
Sbjct: 160 DCT 162
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GHMA C A ++K CF CG+L H + C K + C+ C GH
Sbjct: 79 EPKREREQQCYNCGKAGHMARECDHANEQK--CFTCGTLGHIQKLCDKVK-CYRCGGIGH 135
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGH 260
A C ++ C CG +GH
Sbjct: 136 VALQCSKASET------TCYNCGKAGH 156
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 54/115 (46%), Gaps = 18/115 (15%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGH 233
D+ +CYNC + GH++ +C+ + R++ C+ CG H R+C A Q CF C GH
Sbjct: 58 DQTEDSCYNCHKSGHISRDCKEPKREREQQCYNCGKAGHMARECDHANEQKCFTCGTLGH 117
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
K C DK K C +CG GH C + E CY C GH+
Sbjct: 118 IQKLC-DKVK--------CYRCGGIGHVALQCSKA------SETTCYNCGKAGHV 157
>gi|358346811|ref|XP_003637458.1| Transcription elongation factor SPT6 [Medicago truncatula]
gi|355503393|gb|AES84596.1| Transcription elongation factor SPT6 [Medicago truncatula]
Length = 2159
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 75/196 (38%), Gaps = 32/196 (16%)
Query: 182 TCYNCGEEGHMAVNC------RSAVKRKKPCFVCGSLEHGVRQCSK----------AQDC 225
+CY CGE GHMA C C+ CG H R+C++ C
Sbjct: 1401 SCYKCGESGHMARECTQEGGGGGGRGGGGSCYKCGESGHMARECTQEGGGGGGRGGGGSC 1460
Query: 226 FICKKGGHRAKDCPDKHKSGFQNAQ---VCLKCGDSGHDMFSC--RNSYSLDDLKEVQCY 280
+ C + GH A++C + G + C KCG+SGH C CY
Sbjct: 1461 YKCGESGHMARECTQEGGGGGRGGGGGGTCYKCGESGHMARDCTQEGGGGGGRGGGGSCY 1520
Query: 281 ICRCFGHLC--CVN--ISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPS 336
C GH+ C G +C++CG+ GH + C + G
Sbjct: 1521 KCGESGHMARECTQEGGGGGRGGGGTCYKCGESGHMA-------RECTQEGGGGGGRGGG 1573
Query: 337 SCYNCGAEGHFARECV 352
+CY CG GH AREC
Sbjct: 1574 ACYKCGESGHMARECT 1589
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 73/197 (37%), Gaps = 33/197 (16%)
Query: 182 TCYNCGEEGHMAVNC------RSAVKRKKPCFVCGSLEHGVRQCSK----------AQDC 225
C+ CGE GHMA C C+ CG H R+C++ C
Sbjct: 1372 ACHKCGESGHMARECTQEGGGGGGRGGGGSCYKCGESGHMARECTQEGGGGGGRGGGGSC 1431
Query: 226 FICKKGGHRAKDCPDKHKSGFQNAQV--CLKCGDSGHDMFSCRNSYSLDDLKEVQ---CY 280
+ C + GH A++C + G C KCG+SGH C CY
Sbjct: 1432 YKCGESGHMARECTQEGGGGGGRGGGGSCYKCGESGHMARECTQEGGGGGRGGGGGGTCY 1491
Query: 281 ICRCFGHLC--CVN---ISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASP 335
C GH+ C G SC++CG+ GH + C + G
Sbjct: 1492 KCGESGHMARDCTQEGGGGGGRGGGGSCYKCGESGHMA-------RECTQEGGGGGRGGG 1544
Query: 336 SSCYNCGAEGHFARECV 352
+CY CG GH AREC
Sbjct: 1545 GTCYKCGESGHMARECT 1561
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 81/233 (34%), Gaps = 62/233 (26%)
Query: 182 TCYNCGEEGHMAVNC------------RSAVKRKKPCFVCGSLEHGVRQCSKAQD----- 224
CY CGE GHMA C R + C+ CG H R+C++
Sbjct: 1929 ACYKCGESGHMARECTQEGGGGRGGGGRGGGRGGGACYKCGESGHMARECTQEGGGGGGR 1988
Query: 225 --------CFICKKGGHRAKDCPDK----------HKSGFQNAQVCLKCGDSGHDMFSCR 266
C+ C + GH A++C + + G C KCG+SGH C
Sbjct: 1989 GGGRGGGACYKCGESGHMARECTQEGGGGGGWGGGGRGGGSGGGACYKCGESGHMARECT 2048
Query: 267 NSYSLDDLKEVQ-----CYICRCFGHLC--CVN-------------ISDAVPGEVSCFRC 306
+ CY C GH+ C G +C++C
Sbjct: 2049 QEGGGGGGRGGGRGGGACYKCGESGHMARECTQEGGGGGGGGWGGGGRGGGSGGGACYKC 2108
Query: 307 GQLGHTGLHWNSCMQ----ACARSRGETVEASPSSCYNCGAEGHFARECVSSS 355
G+ GH C Q G S +CY CG GHFAREC +S+
Sbjct: 2109 GESGHMA---RDCTQEGGGGGGWGGGGRGGGSGGNCYKCGESGHFARECPAST 2158
>gi|354622941|ref|NP_001135177.2| zinc finger protein 9 [Salmo salar]
gi|221219922|gb|ACM08622.1| Cellular nucleic acid-binding protein [Salmo salar]
gi|221219978|gb|ACM08650.1| Cellular nucleic acid-binding protein [Salmo salar]
Length = 164
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 80/181 (44%), Gaps = 40/181 (22%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP----------CFVCGSLEHGVRQCSKAQD-CFICKKG 231
C+ CG GH NC A R + C+ CG H R C + +D C+ C +
Sbjct: 8 CFRCGRPGHWIKNCPEAGGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDACYNCHRS 67
Query: 232 GHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCV 291
GH ++DC + K + Q C CG +GH C D E +CY C FGH+
Sbjct: 68 GHISRDCKEPKK---EREQCCYSCGKAGHVARDC------DHANEQKCYSCGGFGHI--- 115
Query: 292 NISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
+ +V C+RCG++GH + + +AS +CY CG GH A+EC
Sbjct: 116 ---QKLCDKVKCYRCGEIGHVAV--------------QCSKASEVNCYKCGNTGHLAKEC 158
Query: 352 V 352
Sbjct: 159 T 159
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 9/87 (10%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CY+CG+ GH+A +C A ++K C+ CG H + C K + C+ C + GH
Sbjct: 76 EPKKEREQCCYSCGKAGHVARDCDHANEQK--CYSCGGFGHIQKLCDKVK-CYRCGEIGH 132
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGH 260
A C K+ N C KCG++GH
Sbjct: 133 VAVQCS---KASEVN---CYKCGNTGH 153
>gi|291244816|ref|XP_002742290.1| PREDICTED: Vasa-like, partial [Saccoglossus kowalevskii]
Length = 679
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 79/185 (42%), Gaps = 24/185 (12%)
Query: 181 QTCYNCGEEGHMAVNC--------RSAVKRKKPCFVCGSLEHGVRQCSK----AQDCFIC 228
+ C+ CGEEGHM+ C + + CF CG H R+C K ++CF C
Sbjct: 70 RNCFKCGEEGHMSRECPKGGGGGGGGSGGGDRSCFKCGEEGHMSRECPKGGGGGRNCFKC 129
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
+ GH +++CP K G + C KCG+ GH C + C+ C GH+
Sbjct: 130 GEEGHMSRECP---KGGGGGGRGCFKCGEDGHMSRECPQGGG-GGGRGRGCFKCGEEGHM 185
Query: 289 C--CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGH 346
C + CF+CG+ GH C A G +C+ CG GH
Sbjct: 186 SRDCTSGGLGKSSGGGCFKCGESGH---FSRECPNA---ESGGGGGGGGGNCFRCGESGH 239
Query: 347 FAREC 351
FA++C
Sbjct: 240 FAKDC 244
>gi|197632623|gb|ACH71035.1| zinc finger protein 9-2 [Salmo salar]
Length = 162
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 80/181 (44%), Gaps = 40/181 (22%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP----------CFVCGSLEHGVRQCSKAQD-CFICKKG 231
C+ CG GH NC A R + C+ CG H R C + +D C+ C +
Sbjct: 6 CFRCGRPGHWIKNCPEAGGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDACYNCHRS 65
Query: 232 GHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCV 291
GH ++DC + K + Q C CG +GH C D E +CY C FGH+
Sbjct: 66 GHISRDCKEPKK---EREQCCYSCGKAGHVARDC------DHANEQKCYSCGGFGHI--- 113
Query: 292 NISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
+ +V C+RCG++GH + + +AS +CY CG GH A+EC
Sbjct: 114 ---QKLCDKVKCYRCGEIGHVAV--------------QCSKASEVNCYKCGNTGHLAKEC 156
Query: 352 V 352
Sbjct: 157 T 157
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 9/87 (10%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CY+CG+ GH+A +C A ++K C+ CG H + C K + C+ C + GH
Sbjct: 74 EPKKEREQCCYSCGKAGHVARDCDHANEQK--CYSCGGFGHIQKLCDKVK-CYRCGEIGH 130
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGH 260
A C K+ N C KCG++GH
Sbjct: 131 VAVQCS---KASEVN---CYKCGNTGH 151
>gi|340057209|emb|CCC51551.1| putative universal minicircle sequence binding protein (UMSBP)
[Trypanosoma vivax Y486]
Length = 198
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 75/188 (39%), Gaps = 23/188 (12%)
Query: 179 GWQTCYNCGEEGHMAVNCRS---AVKRKKPCFVCGSLEHGVRQC--------SKAQDCFI 227
G +CY CGE GH A C + + C+ CG H R+C A+ CF
Sbjct: 16 GASSCYRCGEAGHFARECTNVPPGAMGDRACYNCGQPGHLSRECPTMPHGAVGGARACFT 75
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGH 287
C + GH ++DCP +GF + C CG GH C CY C GH
Sbjct: 76 CGQFGHLSRDCPGMRGAGF-GGRACYNCGQPGHISRDCPGMRGGSSFGGRSCYNCGKVGH 134
Query: 288 LC--CVNISDAV--PGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGA 343
+ C A P SC+ C Q GH + C + + +CYNCG
Sbjct: 135 ISRDCPTARGAYGGPQTRSCYHCQQEGHI-------ARDCPNAPADGAVRGGGACYNCGQ 187
Query: 344 EGHFAREC 351
GH +R C
Sbjct: 188 PGHISRAC 195
>gi|99907876|gb|ABF68761.1| CNBP mutant S158A, partial [synthetic construct]
Length = 163
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 81/186 (43%), Gaps = 39/186 (20%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVKRKKP---------CFVCGSLEHGVRQCSKAQD-CF 226
D C+ CG GH NC +A + + C+ CG H R C + +D C+
Sbjct: 2 DMSTSECFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDACY 61
Query: 227 ICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFG 286
C + H ++DC + K + Q C CG +GH C D E +CY C FG
Sbjct: 62 NCHRSXHISRDCKEPKK---EREQCCYNCGKAGHVARDC------DHANEQKCYSCGGFG 112
Query: 287 HLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGH 346
H + +V C+RCG++GH + + +A+ +CYNCG GH
Sbjct: 113 HF------QKLCDKVKCYRCGEIGHVAV--------------QCSKATEVNCYNCGKTGH 152
Query: 347 FARECV 352
AR+C
Sbjct: 153 LARDCA 158
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 18/84 (21%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKR----------------KKPCFVCGSLEHGVR 217
+P Q CYNCG+ GH+A +C A ++ K C+ CG + H
Sbjct: 75 EPKKEREQCCYNCGKAGHVARDCDHANEQKCYSCGGFGHFQKLCDKVKCYRCGEIGHVAV 134
Query: 218 QCSKAQD--CFICKKGGHRAKDCP 239
QCSKA + C+ C K GH A+DC
Sbjct: 135 QCSKATEVNCYNCGKTGHLARDCA 158
>gi|354622939|ref|NP_001133217.2| zinc finger protein 9 [Salmo salar]
gi|221220712|gb|ACM09017.1| Cellular nucleic acid-binding protein [Salmo salar]
Length = 167
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 79/183 (43%), Gaps = 42/183 (22%)
Query: 183 CYNCGEEGHMAVNCRSA------------VKRKKPCFVCGSLEHGVRQCSKAQD-CFICK 229
C+ CG GH NC A + C+ CG H R C + +D C+ C
Sbjct: 9 CFRCGRPGHWIKNCPEAGSGGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDACYNCH 68
Query: 230 KGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC 289
+ GH ++DC + K + Q C CG +GH C D E +CY C FGH+
Sbjct: 69 RSGHISRDCKEPKK---EREQCCYSCGKAGHVARDC------DHANEQKCYSCGGFGHI- 118
Query: 290 CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAR 349
+ +V C+RCG++GH + + +AS +CY CG GH A+
Sbjct: 119 -----QKLCDKVKCYRCGEIGHVAV--------------QCSKASEVNCYKCGNTGHLAK 159
Query: 350 ECV 352
EC
Sbjct: 160 ECT 162
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 9/87 (10%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CY+CG+ GH+A +C A ++K C+ CG H + C K + C+ C + GH
Sbjct: 79 EPKKEREQCCYSCGKAGHVARDCDHANEQK--CYSCGGFGHIQKLCDKVK-CYRCGEIGH 135
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGH 260
A C K+ N C KCG++GH
Sbjct: 136 VAVQCS---KASEVN---CYKCGNTGH 156
>gi|299752665|ref|XP_001841159.2| DNA-binding protein hexbp [Coprinopsis cinerea okayama7#130]
gi|298409943|gb|EAU80696.2| DNA-binding protein hexbp [Coprinopsis cinerea okayama7#130]
Length = 173
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 70/147 (47%), Gaps = 23/147 (15%)
Query: 176 PDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC----------SKAQDC 225
P G TCYNCG EGH++ +C A K K C+ CG H R C S+ +C
Sbjct: 21 PKAGTPTCYNCGGEGHVSRDCTQAAK-PKSCYRCGEEGHLSRDCTSDNAAAGGVSRGGEC 79
Query: 226 FICKKGGHRAKDCPDKHKSGFQNAQ-VCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
+ C K GH A+ CPD F +Q C CG GH S D ++ +CY C
Sbjct: 80 YRCGKTGHLARSCPDSGYGSFGGSQKTCYTCGGVGH--------LSRDCVQGSKCYNCSS 131
Query: 285 FGHLCCVNISDAVPGEVSCFRCGQLGH 311
GH ++ P + +C++CGQ GH
Sbjct: 132 IGH---ISRDCPQPQKRACYQCGQEGH 155
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 81/179 (45%), Gaps = 27/179 (15%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA---QDCFICKKGGHRA 235
G + C+NCG GH A NC A C+ CG H R C++A + C+ C + GH +
Sbjct: 3 GARGCFNCGGFGHQAANCPKA--GTPTCYNCGGEGHVSRDCTQAAKPKSCYRCGEEGHLS 60
Query: 236 KDCPDKHKS--GFQNAQVCLKCGDSGHDMFSCRNS-YSLDDLKEVQCYICRCFGHLCCVN 292
+DC + + G C +CG +GH SC +S Y + CY C GHL
Sbjct: 61 RDCTSDNAAAGGVSRGGECYRCGKTGHLARSCPDSGYGSFGGSQKTCYTCGGVGHL---- 116
Query: 293 ISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
D V G C+ C +GH SR + + +CY CG EGH +R+C
Sbjct: 117 SRDCVQGS-KCYNCSSIGHI-------------SR-DCPQPQKRACYQCGQEGHISRDC 160
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 220 SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQC 279
S A+ CF C GH+A +CP K+G C CG GH C + K C
Sbjct: 2 SGARGCFNCGGFGHQAANCP---KAG---TPTCYNCGGEGHVSRDCTQA-----AKPKSC 50
Query: 280 YICRCFGHLCCVNISD-AVPGEVS----CFRCGQLGHTGLHWNSCMQACARSRGETVEAS 334
Y C GHL SD A G VS C+RCG+ GH ++C S + S
Sbjct: 51 YRCGEEGHLSRDCTSDNAAAGGVSRGGECYRCGKTGHL-------ARSCPDSGYGSFGGS 103
Query: 335 PSSCYNCGAEGHFARECVSSSKV 357
+CY CG GH +R+CV SK
Sbjct: 104 QKTCYTCGGVGHLSRDCVQGSKC 126
>gi|197632621|gb|ACH71034.1| zinc finger protein 9-1 [Salmo salar]
Length = 165
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 79/183 (43%), Gaps = 42/183 (22%)
Query: 183 CYNCGEEGHMAVNCRSA------------VKRKKPCFVCGSLEHGVRQCSKAQD-CFICK 229
C+ CG GH NC A + C+ CG H R C + +D C+ C
Sbjct: 7 CFRCGRPGHWIKNCPEAGSGGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDACYNCH 66
Query: 230 KGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC 289
+ GH ++DC + K + Q C CG +GH C D E +CY C FGH+
Sbjct: 67 RSGHISRDCKEPKK---EREQCCYSCGKAGHVARDC------DHANEQKCYSCGGFGHI- 116
Query: 290 CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAR 349
+ +V C+RCG++GH + + +AS +CY CG GH A+
Sbjct: 117 -----QKLCDKVKCYRCGEIGHVAV--------------QCSKASEVNCYKCGNTGHLAK 157
Query: 350 ECV 352
EC
Sbjct: 158 ECT 160
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 9/87 (10%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CY+CG+ GH+A +C A ++K C+ CG H + C K + C+ C + GH
Sbjct: 77 EPKKEREQCCYSCGKAGHVARDCDHANEQK--CYSCGGFGHIQKLCDKVK-CYRCGEIGH 133
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGH 260
A C K+ N C KCG++GH
Sbjct: 134 VAVQCS---KASEVN---CYKCGNTGH 154
>gi|229366404|gb|ACQ58182.1| Cellular nucleic acid-binding protein [Anoplopoma fimbria]
Length = 170
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 83/186 (44%), Gaps = 44/186 (23%)
Query: 183 CYNCGEEGHMAVNC--------------RSAVKRKKPCFVCGSLEHGVRQCSKAQD-CFI 227
CY CG GH A +C + C+ CG H R C + +D C+
Sbjct: 10 CYQCGRSGHWAKHCPSSSMGSSGRGRGRGRGRGKDLFCYRCGDQGHMARDCDQTEDACYN 69
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGH 287
C + GH ++DC + K + Q+C C +GH C ++ +CY C FGH
Sbjct: 70 CHRSGHISRDCKEPKK---EREQLCYICNKAGHMARDCGHA------NNQKCYSCGGFGH 120
Query: 288 LCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHF 347
+ + +V C+RCG +GH +H CA++ S ++CYNCG GH
Sbjct: 121 I------QKLCDKVKCYRCGDIGHVAVH-------CAKT-------SETNCYNCGTAGHL 160
Query: 348 ARECVS 353
AR+C +
Sbjct: 161 ARDCTN 166
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 9/94 (9%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CY C + GHMA +C A +K C+ CG H + C K + C+ C GH
Sbjct: 82 EPKKEREQLCYICNKAGHMARDCGHANNQK--CYSCGGFGHIQKLCDKVK-CYRCGDIGH 138
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
A C ++ C CG +GH C N
Sbjct: 139 VAVHCAKTSETN------CYNCGTAGHLARDCTN 166
>gi|410899915|ref|XP_003963442.1| PREDICTED: cellular nucleic acid-binding protein-like [Takifugu
rubripes]
Length = 167
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 85/187 (45%), Gaps = 42/187 (22%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVK------------RKKPCFVCGSLEHGVRQCSKAQD-C 225
G C+ CG GH +C + +++ C+ CG H R C + +D C
Sbjct: 5 GNNECFGCGRTGHWIKDCPKSSGPRGRGPRGRGRVKEQFCYRCGEHGHIARDCDQPEDSC 64
Query: 226 FICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCF 285
+ C K GH ++DC + + + +C CG +GH C ++ E +CY C F
Sbjct: 65 YNCHKSGHISRDCKEPKR---EREHLCYNCGKAGHVARDCEHA------NEQKCYSCGEF 115
Query: 286 GHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEG 345
GH+ + +V C+RCG++GH + + +AS ++CYNCG G
Sbjct: 116 GHI------QKLCDKVKCYRCGEIGHVAV--------------QCSKASETNCYNCGKAG 155
Query: 346 HFARECV 352
H AR+C
Sbjct: 156 HVARDCT 162
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 36/136 (26%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAK 236
D+ +CYNC + GH++ +C+ + ++ C+ C K GH A+
Sbjct: 58 DQPEDSCYNCHKSGHISRDCKEPKRERE------------------HLCYNCGKAGHVAR 99
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDA 296
DC N Q C CG+ GH C +V+CY C GH V + +
Sbjct: 100 DCE------HANEQKCYSCGEFGHIQKLC---------DKVKCYRCGEIGH---VAVQCS 141
Query: 297 VPGEVSCFRCGQLGHT 312
E +C+ CG+ GH
Sbjct: 142 KASETNCYNCGKAGHV 157
>gi|348570490|ref|XP_003471030.1| PREDICTED: cellular nucleic acid-binding protein-like [Cavia
porcellus]
Length = 169
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 74/188 (39%), Gaps = 47/188 (25%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP------------------CFVCGSLEHGVRQCSKAQD 224
C+ CG GH A C R++ C+ CG+ H + C
Sbjct: 6 CFKCGRNGHWARECPKGGARQRGFRSSDSGPQCSSASQSDICYRCGAAGHYAKNCDLQDI 65
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
C+ C K GH AKDCP+ + Q Q C C GH C D K +CY C
Sbjct: 66 CYSCGKSGHIAKDCPEPKQ---QKEQCCYTCSRPGHLARDC------DQRKVQKCYTCGE 116
Query: 285 FGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAE 344
GH+ +V C+RCG+ GH + N +AS +CY CG
Sbjct: 117 SGHI------QKDCAQVRCYRCGETGHMAMSCN--------------KASEVNCYRCGEA 156
Query: 345 GHFARECV 352
GH AREC
Sbjct: 157 GHIARECT 164
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 46/116 (39%), Gaps = 38/116 (32%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P + Q CY C GH+A +C K Q C+ C + GH
Sbjct: 81 EPKQQKEQCCYTCSRPGHLARDCDQ---------------------RKVQKCYTCGESGH 119
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
KDC AQV C +CG++GH SC + EV CY C GH+
Sbjct: 120 IQKDC----------AQVRCYRCGETGHMAMSC------NKASEVNCYRCGEAGHI 159
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD--CFICKKG 231
D R Q CY CGE GH+ +C + V+ C+ CG H C+KA + C+ C +
Sbjct: 102 DCDQRKVQKCYTCGESGHIQKDC-AQVR----CYRCGETGHMAMSCNKASEVNCYRCGEA 156
Query: 232 GHRAKDC 238
GH A++C
Sbjct: 157 GHIAREC 163
>gi|348540579|ref|XP_003457765.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 2
[Oreochromis niloticus]
Length = 170
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 48/189 (25%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP------------------CFVCGSLEHGVRQCSKAQD 224
C+ CG GH NC S + + C+ CG L H R C + +D
Sbjct: 6 CFGCGHSGHWVKNCPSGGRGRGKGRGRGKGDTHHQTSMNLFCYRCGELGHVARDCERTED 65
Query: 225 -CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICR 283
C+ C + H ++DC + K + Q+C CG +GH +C +++ E +CY C
Sbjct: 66 ACYNCGREDHISRDCKEPKK---EREQLCYNCGKAGHMARNCNHAH------EQKCYSCG 116
Query: 284 CFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGA 343
FGH+ +V C+RCG++GH +H + +AS +CYN G
Sbjct: 117 SFGHI------QKCCEKVKCYRCGEIGHVAVHCS--------------KASELNCYNYGK 156
Query: 344 EGHFARECV 352
GH A+EC
Sbjct: 157 SGHLAKECT 165
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GHMA NC A ++K C+ CGS H +++C + C+ C + GH
Sbjct: 82 EPKKEREQLCYNCGKAGHMARNCNHAHEQK--CYSCGSFGH-IQKCCEKVKCYRCGEIGH 138
Query: 234 RAKDC 238
A C
Sbjct: 139 VAVHC 143
>gi|221114884|ref|XP_002154581.1| PREDICTED: DNA-binding protein HEXBP-like isoform 1 [Hydra
magnipapillata]
gi|449665534|ref|XP_004206169.1| PREDICTED: DNA-binding protein HEXBP-like isoform 2 [Hydra
magnipapillata]
Length = 209
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 67/137 (48%), Gaps = 6/137 (4%)
Query: 181 QTCYNCGEEGHMAVNC--RSAVKRKKPCFVCGSLEHGVRQCSKAQD-CFICKKGGHRAKD 237
+TCY+CG GH++ +C R K K+ C+ CG H R C ++ C+ C K GH KD
Sbjct: 61 RTCYSCGRSGHISRDCTQRGGRKGKQRCYRCGKDGHFARDCEGEEEMCYTCGKAGHIKKD 120
Query: 238 CPDKHK-SGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNIS 294
CP+ + N QVC C GH C ++V CY C GH C N S
Sbjct: 121 CPESESFTSSTNEQVCYHCNKPGHFARECAEKDDSSRERDVTCYKCNEKGHFARDCHNKS 180
Query: 295 DAVPGEVSCFRCGQLGH 311
+ +CF+C Q+GH
Sbjct: 181 NDKKNGNTCFKCHQVGH 197
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 90/199 (45%), Gaps = 38/199 (19%)
Query: 182 TCYNCGEEGHMAVNC------RSAVKRKKPCFVCGSLEHGVRQCSK-----------AQD 224
TCY CG EGH A NC ++ K K C+ CG + H R CSK ++
Sbjct: 3 TCYKCGNEGHYARNCTEPSSTETSQKSDKECYRCGEVGHLSRDCSKSSSGGGSGNFDSRT 62
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
C+ C + GH ++DC + G + Q C +CG GH C + +E CY C
Sbjct: 63 CYSCGRSGHISRDCT--QRGGRKGKQRCYRCGKDGHFARDC-------EGEEEMCYTCGK 113
Query: 285 FGHL---CCVNIS-DAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYN 340
GH+ C + S + E C+ C + GH + CA + ++ +CY
Sbjct: 114 AGHIKKDCPESESFTSSTNEQVCYHCNKPGHF-------ARECA-EKDDSSRERDVTCYK 165
Query: 341 CGAEGHFARECVSSSKVRK 359
C +GHFAR+C + S +K
Sbjct: 166 CNEKGHFARDCHNKSNDKK 184
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 13/120 (10%)
Query: 178 RGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA---------QDCFIC 228
+G Q CY CG++GH A +C ++ C+ CG H + C ++ Q C+ C
Sbjct: 83 KGKQRCYRCGKDGHFARDCEG---EEEMCYTCGKAGHIKKDCPESESFTSSTNEQVCYHC 139
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
K GH A++C +K S + C KC + GH C N S D C+ C GH
Sbjct: 140 NKPGHFARECAEKDDSSRERDVTCYKCNEKGHFARDCHNK-SNDKKNGNTCFKCHQVGHF 198
>gi|320040571|gb|EFW22504.1| zinc knuckle protein [Coccidioides posadasii str. Silveira]
gi|392862016|gb|EAS37384.2| zinc knuckle domain-containing protein [Coccidioides immitis RS]
Length = 199
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 85/198 (42%), Gaps = 39/198 (19%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA--------QDC 225
D P +G CYNCG EGH++ +C K +K C+ CG H R C +A Q+C
Sbjct: 19 DCPKKGSVICYNCGGEGHVSRDCNEPAK-EKSCYRCGLTGHISRDCPQAGESGGARGQEC 77
Query: 226 FICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC------------RNSYSLDD 273
+ C + GH +++CP +SG Q C KCG GH +C SY +
Sbjct: 78 YKCGQVGHISRECPQGGESGEARGQECYKCGQVGHISRNCGQYSGYNGGGYNAGSYRYGN 137
Query: 274 LKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEA 333
+ + CY C +GH D G+ C+ CG+ GH + +GE V
Sbjct: 138 -RPLTCYSCGGYGH----RARDCTQGQ-KCYNCGETGHVSRDCTT------EGKGERV-- 183
Query: 334 SPSSCYNCGAEGHFAREC 351
CY C GH C
Sbjct: 184 ----CYKCKQPGHVQAAC 197
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 19/102 (18%)
Query: 181 QTCYNCGEEGHMAVNCRSAV---------------KRKKPCFVCGSLEHGVRQCSKAQDC 225
Q CY CG+ GH++ NC R C+ CG H R C++ Q C
Sbjct: 102 QECYKCGQVGHISRNCGQYSGYNGGGYNAGSYRYGNRPLTCYSCGGYGHRARDCTQGQKC 161
Query: 226 FICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
+ C + GH ++DC + K +VC KC GH +C N
Sbjct: 162 YNCGETGHVSRDCTTEGK----GERVCYKCKQPGHVQAACPN 199
>gi|15233440|ref|NP_195326.1| cellular nucleic acid-binding protein [Arabidopsis thaliana]
gi|75318587|sp|O65639.1|CSP1_ARATH RecName: Full=Cold shock protein 1; Short=AtCSP1; AltName:
Full=Cold shock domain-containing protein 1
gi|3036806|emb|CAA18496.1| glycine-rich protein [Arabidopsis thaliana]
gi|7270554|emb|CAB81511.1| glycine-rich protein [Arabidopsis thaliana]
gi|110741941|dbj|BAE98911.1| glycine-rich protein [Arabidopsis thaliana]
gi|332661203|gb|AEE86603.1| cellular nucleic acid-binding protein [Arabidopsis thaliana]
Length = 299
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 82/205 (40%), Gaps = 43/205 (20%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP---------CFVCGSLEHGVRQCSKAQD--------- 224
CYNCGE GH++ +C C+ CG H R C+ A +
Sbjct: 102 CYNCGELGHISKDCGIGGGGGGGERRSRGGEGCYNCGDTGHFARDCTSAGNGDQRGATKG 161
Query: 225 ----CFICKKGGHRAKDCPDKH-KSGFQNAQV------CLKCGDSGHDMFSCRNSYSLDD 273
C+ C GH A+DC K +G Q V C CGD GH C + +
Sbjct: 162 GNDGCYTCGDVGHVARDCTQKSVGNGDQRGAVKGGNDGCYTCGDVGHFARDCTQKVAAGN 221
Query: 274 LKEV-----QCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRG 328
++ CY C GH+ + P C++CG GH C Q RG
Sbjct: 222 VRSGGGGSGTCYSCGGVGHIARDCATKRQP-SRGCYQCGGSGHL---ARDCDQ-----RG 272
Query: 329 ETVEASPSSCYNCGAEGHFARECVS 353
+ ++CY CG EGHFAREC S
Sbjct: 273 SGGGGNDNACYKCGKEGHFARECSS 297
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 19/82 (23%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDC 238
G TCY+CG GH+A +C A KR+ ++ C+ C GH A+DC
Sbjct: 228 GSGTCYSCGGVGHIARDC--ATKRQ-----------------PSRGCYQCGGSGHLARDC 268
Query: 239 PDKHKSGFQNAQVCLKCGDSGH 260
+ G N C KCG GH
Sbjct: 269 DQRGSGGGGNDNACYKCGKEGH 290
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 303 CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVRKR 360
C+ CG+LGH C GE CYNCG GHFAR+C S+ +R
Sbjct: 102 CYNCGELGHI---SKDCGIGGGGGGGERRSRGGEGCYNCGDTGHFARDCTSAGNGDQR 156
>gi|198428176|ref|XP_002131221.1| PREDICTED: similar to universal minicircle sequence binding protein
(UMSBP), putative isoform 1 [Ciona intestinalis]
Length = 299
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 84/198 (42%), Gaps = 53/198 (26%)
Query: 178 RGWQTCYNCGEEGHMAVNCRS----AVKR---KKP--------CFVCGSLEHGVRQCSKA 222
R CY CG GH A C + ++R ++P CF CG H R C A
Sbjct: 107 RDADVCYKCGTPGHFARECPNDAADGIQRNEDRRPMGRRNNDYCFRCGQPGHMARDCLSA 166
Query: 223 QD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC-----RNSYSLDDLKE 276
++ C+ C K GH A+DCP+ + C KCG +GH C RN + + +E
Sbjct: 167 ENACYNCYKEGHLARDCPEDN--------ACYKCGKAGHLARKCPEDADRNGDARLNRRE 218
Query: 277 V---QCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEA 333
QCY+C+ GH+ A E +C+RC GH + C E
Sbjct: 219 AGTKQCYLCQNVGHI------QANCPEATCYRCHGEGHIA-------RDCPNGNEE---- 261
Query: 334 SPSSCYNCGAEGHFAREC 351
CYNC GH AR+C
Sbjct: 262 ----CYNCRRPGHKARDC 275
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 56/145 (38%), Gaps = 23/145 (15%)
Query: 225 CFICKKGGHRAKDCP-----------DKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDD 273
C+ C GH A++CP D+ G +N C +CG GH C ++
Sbjct: 112 CYKCGTPGHFARECPNDAADGIQRNEDRRPMGRRNNDYCFRCGQPGHMARDCLSA----- 166
Query: 274 LKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEA 333
E CY C GHL + P + +C++CG+ GH +R EA
Sbjct: 167 --ENACYNCYKEGHL-----ARDCPEDNACYKCGKAGHLARKCPEDADRNGDARLNRREA 219
Query: 334 SPSSCYNCGAEGHFARECVSSSKVR 358
CY C GH C ++ R
Sbjct: 220 GTKQCYLCQNVGHIQANCPEATCYR 244
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 66/186 (35%), Gaps = 65/186 (34%)
Query: 224 DCFICKKGGHRAKDCP--DKHKSGF----------------------------------- 246
+CFIC K GH A++CP D+ + +
Sbjct: 47 NCFICDKSGHWARECPESDEQQREYAPRTRGGFRGRGRGRGRGRGSYGGYGGYGGYGTRQ 106
Query: 247 QNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVP----GEVS 302
++A VC KCG GH C N + D ++ + D P
Sbjct: 107 RDADVCYKCGTPGHFARECPND-AADGIQRNE----------------DRRPMGRRNNDY 149
Query: 303 CFRCGQLGHTGLHWNSCMQAC--ARSRGETVEASP--SSCYNCGAEGHFARECVSSSKVR 358
CFRCGQ GH S AC G P ++CY CG GH AR+C +
Sbjct: 150 CFRCGQPGHMARDCLSAENACYNCYKEGHLARDCPEDNACYKCGKAGHLARKCPEDA--- 206
Query: 359 KRNIDA 364
RN DA
Sbjct: 207 DRNGDA 212
>gi|74835178|dbj|BAE44472.1| Vasa [Botryllus primigenus]
Length = 687
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 72/169 (42%), Gaps = 47/169 (27%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
CY CGEEGHM+ +C + +P + CF C + GH ++DCP +
Sbjct: 54 CYKCGEEGHMSRDCPNGGGSSRP-----------------KGCFKCGEEGHMSRDCP--N 94
Query: 243 KSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVS 302
G + C KCG+ GH C N D+ P
Sbjct: 95 GGGDSRPKGCFKCGEEGHMSRDCPNGGG------------------------DSRP--KG 128
Query: 303 CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
CF+CG+ GH + + +RS+G+ + S C+ CG EGHF+REC
Sbjct: 129 CFKCGEEGHMSRDCPNGGEGGSRSQGDRQKGS--GCFKCGEEGHFSREC 175
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 16/73 (21%)
Query: 183 CYNCGEEGHMAVNCRSAV--KRKKPCFVCGSLEHGVRQC--------------SKAQDCF 226
C+ CGEEGHM+ +C + R K CF CG H R C K CF
Sbjct: 104 CFKCGEEGHMSRDCPNGGGDSRPKGCFKCGEEGHMSRDCPNGGEGGSRSQGDRQKGSGCF 163
Query: 227 ICKKGGHRAKDCP 239
C + GH +++CP
Sbjct: 164 KCGEEGHFSRECP 176
>gi|354488556|ref|XP_003506434.1| PREDICTED: cellular nucleic acid-binding protein-like [Cricetulus
griseus]
Length = 170
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 80/190 (42%), Gaps = 48/190 (25%)
Query: 181 QTCYNCGEEGHMAVNC-RSAVKRKKP-----------------CFVCGSLEHGVRQCSKA 222
+TC+ CG GH A C + + + P C+ CG H + C
Sbjct: 4 KTCFKCGRPGHWARECPKGGTRGRTPRSRGRGPQCSSASQSDICYRCGETGHYAKDCDLL 63
Query: 223 QD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYI 281
QD C+ C K GH AKDC + + Q C C GH C D +E +CY
Sbjct: 64 QDTCYNCGKRGHIAKDCTQTKR---EREQCCYICSRPGHLARDC------DRQEEQKCYT 114
Query: 282 CRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNC 341
C FGH+ D ++ C+RCG+ GH ++ + +AS SCY C
Sbjct: 115 CGEFGHI----QKDCT--QIKCYRCGENGHMAVNCS--------------KASEVSCYRC 154
Query: 342 GAEGHFAREC 351
G GH AREC
Sbjct: 155 GEPGHLAREC 164
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 7/61 (11%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD--CFICKKGGHRAKDC 238
Q CY CGE GH+ +C + +K C+ CG H CSKA + C+ C + GH A++C
Sbjct: 110 QKCYTCGEFGHIQKDC-TQIK----CYRCGENGHMAVNCSKASEVSCYRCGEPGHLAREC 164
Query: 239 P 239
P
Sbjct: 165 P 165
>gi|291411194|ref|XP_002721877.1| PREDICTED: zinc finger protein 9 [Oryctolagus cuniculus]
Length = 171
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 78/188 (41%), Gaps = 48/188 (25%)
Query: 183 CYNCGEEGHMAVNC-----RSAVKRKKP-------------CFVCGSLEHGVRQCSKAQD 224
C+ CG GH A C RS R + C+ CG H + C + QD
Sbjct: 6 CFKCGRSGHWARGCPRKEARSQGSRGRGRAIPGTSAMQADICYRCGESGHHAKNCDRLQD 65
Query: 225 -CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICR 283
C+ C K GH AKDC + + + Q C CG GH C + L+E +CY C
Sbjct: 66 ICYNCGKTGHIAKDCLEPKR---EREQYCYTCGRQGHLARDCTH------LEEQKCYSCG 116
Query: 284 CFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGA 343
FGH +V C+RCG+ GH ++ +A +CY CG
Sbjct: 117 EFGHF------QKECTQVKCYRCGETGHVAINCK--------------KAKQVNCYRCGE 156
Query: 344 EGHFAREC 351
GH AREC
Sbjct: 157 FGHLAREC 164
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 20/116 (17%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCS--KAQDCFICKKGGH 233
DR CYNCG+ GH+A +C + R++ C+ CG H R C+ + Q C+ C + GH
Sbjct: 61 DRLQDICYNCGKTGHIAKDCLEPKREREQYCYTCGRQGHLARDCTHLEEQKCYSCGEFGH 120
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
K+C QV C +CG++GH +C+ + K+V CY C FGHL
Sbjct: 121 FQKEC----------TQVKCYRCGETGHVAINCKKA------KQVNCYRCGEFGHL 160
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Query: 173 FDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGG 232
+P Q CY CG +GH+A +C ++K C+ CG H ++C++ + C+ C + G
Sbjct: 81 LEPKREREQYCYTCGRQGHLARDCTHLEEQK--CYSCGEFGHFQKECTQVK-CYRCGETG 137
Query: 233 HRAKDCPDKHKSGFQNAQV-CLKCGDSGHDMFSCRNSYSLD 272
H A +C + QV C +CG+ GH C N + D
Sbjct: 138 HVAINCK-------KAKQVNCYRCGEFGHLARECDNEMASD 171
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 64/154 (41%), Gaps = 27/154 (17%)
Query: 223 QDCFICKKGGHRAKDCPDKHK--------------SGFQNAQVCLKCGDSGHDMFSCRNS 268
++CF C + GH A+ CP K + A +C +CG+SGH +C
Sbjct: 4 KECFKCGRSGHWARGCPRKEARSQGSRGRGRAIPGTSAMQADICYRCGESGHHAKNC--- 60
Query: 269 YSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGH-----TGLHWNSCMQAC 323
D L+++ CY C GH+ + E C+ CG+ GH T L C +C
Sbjct: 61 ---DRLQDI-CYNCGKTGHIAKDCLEPKREREQYCYTCGRQGHLARDCTHLEEQKCY-SC 115
Query: 324 ARSRGETVEASPSSCYNCGAEGHFARECVSSSKV 357
E + CY CG GH A C + +V
Sbjct: 116 GEFGHFQKECTQVKCYRCGETGHVAINCKKAKQV 149
>gi|258676573|gb|ACV87294.1| VASA DEAD-box protein [Phallusia mammillata]
Length = 851
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 80/199 (40%), Gaps = 55/199 (27%)
Query: 181 QTCYNCGEEGHMAVNCRSA-----------VKRKKPCFVCGSLEHGVRQC---------- 219
+TC+ CGEEGHM+ C SA R K CF CG H R+C
Sbjct: 162 KTCFKCGEEGHMSRECPSADSSSGGFGGSGGGRPKTCFKCGEEGHMSRECPSADSSSGGF 221
Query: 220 --SKAQDCFICKKGGHRAKDCPDKHKSGFQNA--QVCLKCGDSGHDMFSCRNSYSLDDLK 275
K++ CF C + GH ++DCP +GF + C KCG+ GH C + S
Sbjct: 222 GGGKSRGCFKCGEEGHMSRDCPSGGSTGFGGGKSKSCFKCGEEGHMSRDCPSGGSQGGFG 281
Query: 276 EVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASP 335
+ CF+CG+ GH S + R +G
Sbjct: 282 GGR---------------------PKGCFKCGEEGHMSRECPSGGDSSNRGKG------- 313
Query: 336 SSCYNCGAEGHFARECVSS 354
C+ CG EGH AR+C S+
Sbjct: 314 --CFKCGEEGHMARDCPSA 330
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 77/221 (34%), Gaps = 66/221 (29%)
Query: 172 YFDPPDRGWQT-----------CYNCGEEGHMAVNC---------RSAVKRKKPCFVCGS 211
+ D PDR + + C+ CGEEGH + C S R K CF CG
Sbjct: 110 FGDKPDRSFASGESSSNNKGKGCFKCGEEGHKSRECPKGGQQGFGASGGGRPKTCFKCGE 169
Query: 212 LEHGVRQCSKA---------------QDCFICKKGGHRAKDCPDKHKSGFQNAQV----C 252
H R+C A + CF C + GH +++CP S C
Sbjct: 170 EGHMSRECPSADSSSGGFGGSGGGRPKTCFKCGEEGHMSRECPSADSSSGGFGGGKSRGC 229
Query: 253 LKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHT 312
KCG+ GH C + S SCF+CG+ GH
Sbjct: 230 FKCGEEGHMSRDCPSGGSTGFGGGKS----------------------KSCFKCGEEGHM 267
Query: 313 GLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVS 353
C ++ P C+ CG EGH +REC S
Sbjct: 268 S---RDCPSGGSQG--GFGGGRPKGCFKCGEEGHMSRECPS 303
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 303 CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
CF+CG+ GH C + + G + P +C+ CG EGH +REC S+
Sbjct: 132 CFKCGEEGHKS---RECPKGGQQGFGASGGGRPKTCFKCGEEGHMSRECPSA 180
>gi|331238075|ref|XP_003331693.1| hypothetical protein PGTG_12858 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309310683|gb|EFP87274.1| hypothetical protein PGTG_12858 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 169
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 32/177 (18%)
Query: 176 PDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ-DCFICKKGGHR 234
P G +CYNCG EGH++ +C + K C+ CG H R CS+ + +CF C + GH
Sbjct: 19 PKSGTPSCYNCGGEGHISKDCSNPTAPKS-CYTCGDSGHISRDCSQQKTNCFKCGEEGHY 77
Query: 235 AKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNIS 294
++DCP GD G+ +S CY C GHL S
Sbjct: 78 SRDCPQAGGG-----------GDQGYQSYSGGRGRGGGGGGSRNCYTCGGVGHL-----S 121
Query: 295 DAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
G+ CF CG++GH + C+R + + +CY CG GH +++C
Sbjct: 122 RDCVGDQKCFNCGEVGHV-------SRDCSRPQAK-------NCYACGQSGHISKDC 164
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 54/144 (37%), Gaps = 29/144 (20%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
C+ C GGH A CP KSG + C CG GH C N CY C
Sbjct: 5 CYNCGGGGHLAAACP---KSGTPS---CYNCGGEGHISKDCSNP-----TAPKSCYTCGD 53
Query: 285 FGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQA-----------CARSRGETVEA 333
GH+ D + +CF+CG+ GH + C QA
Sbjct: 54 SGHI----SRDCSQQKTNCFKCGEEGH---YSRDCPQAGGGGDQGYQSYSGGRGRGGGGG 106
Query: 334 SPSSCYNCGAEGHFARECVSSSKV 357
+CY CG GH +R+CV K
Sbjct: 107 GSRNCYTCGGVGHLSRDCVGDQKC 130
>gi|340507460|gb|EGR33421.1| universal minicircle sequence binding protein, putative
[Ichthyophthirius multifiliis]
Length = 724
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 98/233 (42%), Gaps = 61/233 (26%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKK---PCFVCGSLEHGVRQCSKAQ-----DCFICKKGGHR 234
C+ CGEEGHM+ +C + R+K CF CG + H ++C + C+ C++ GH
Sbjct: 305 CFKCGEEGHMSRDCSNGNSREKKNNSCFNCGEITHMSKECPNPKKPRSIQCYKCQQEGHM 364
Query: 235 AKDCPDK-----------------HKSG-FQNAQVCLKCGDSGHDMFSCRNSYSLDDLKE 276
AKDCP+ HKS +C+KC + GH C+N D + +
Sbjct: 365 AKDCPNAQQYQARVMKCFLCKKEGHKSNDCTEPPLCMKCKEQGHQSKDCQNP---DHMNK 421
Query: 277 VQCYICRCFGHL---CCVNISDAV------------PGEVS------CFRCGQLGHTGL- 314
C+ C GH C N ++ PG CF+C + GH +
Sbjct: 422 RVCFNCGDEGHPTKGCPQNQQNSFRNNNDTNSTYQKPGGFQQREKPKCFKCQKEGHRAID 481
Query: 315 -----HWNSCMQACARSR--GETVEASPSSCYNCGAEGHFARECVSSSKVRKR 360
+ C+Q S+ + C+NCG E H +++C KV++R
Sbjct: 482 CTELPYCFKCLQNIHSSKECDHPENSKKRVCFNCGDEKHCSKDCP---KVQQR 531
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 27/177 (15%)
Query: 201 KRKKPCFVCGSLEHGVRQCS-------KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCL 253
+RKK CF CG H R CS K CF C + H +K+CP+ K + C
Sbjct: 300 ERKKGCFKCGEEGHMSRDCSNGNSREKKNNSCFNCGEITHMSKECPNPKKP---RSIQCY 356
Query: 254 KCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTG 313
KC GH C N+ + ++C++C+ GH S+ C +C + GH
Sbjct: 357 KCQQEGHMAKDCPNAQQY-QARVMKCFLCKKEGHK-----SNDCTEPPLCMKCKEQGHQ- 409
Query: 314 LHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVRKRNIDASTPTFR 370
++ + C+NCG EGH + C + + RN + + T++
Sbjct: 410 ----------SKDCQNPDHMNKRVCFNCGDEGHPTKGCPQNQQNSFRNNNDTNSTYQ 456
>gi|291409842|ref|XP_002721203.1| PREDICTED: cellular nucleic acid binding protein-like isoform 2
[Oryctolagus cuniculus]
Length = 161
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 78/180 (43%), Gaps = 39/180 (21%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP--------CFVCGSLEHGVRQCSKAQD--CFICKKGG 232
C+ CG GH A C + R + C+ CG H + C +D C+ C +GG
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRDICYRCGESGHLAKDCDLQEDEACYNCGRGG 65
Query: 233 HRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVN 292
H AKDC + + + Q C CG GH C D E +CY C FGH+
Sbjct: 66 HIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSCGEFGHI---- 112
Query: 293 ISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECV 352
D +V C+RCG+ GH ++ + + S +CY CG GH AREC
Sbjct: 113 QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCGESGHLARECT 156
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 54/111 (48%), Gaps = 18/111 (16%)
Query: 181 QTCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKD 237
+ CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KD
Sbjct: 56 EACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKD 115
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C C +CG++GH +C + EV CY C GHL
Sbjct: 116 C---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 151
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 73 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 129
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 130 VAINCS-------KTSEVNCYRCGESGH 150
>gi|291393360|ref|XP_002713212.1| PREDICTED: zinc finger protein 9 isoform 4 [Oryctolagus cuniculus]
gi|296225970|ref|XP_002758718.1| PREDICTED: cellular nucleic acid-binding protein isoform 3
[Callithrix jacchus]
gi|332261813|ref|XP_003279961.1| PREDICTED: cellular nucleic acid-binding protein isoform 5
[Nomascus leucogenys]
gi|338714532|ref|XP_003363103.1| PREDICTED: cellular nucleic acid-binding protein-like [Equus
caballus]
gi|397518586|ref|XP_003829465.1| PREDICTED: cellular nucleic acid-binding protein isoform 4 [Pan
paniscus]
gi|402887093|ref|XP_003906939.1| PREDICTED: cellular nucleic acid-binding protein [Papio anubis]
gi|410037477|ref|XP_003950236.1| PREDICTED: uncharacterized protein LOC460682 [Pan troglodytes]
gi|410951820|ref|XP_003982591.1| PREDICTED: cellular nucleic acid-binding protein isoform 4 [Felis
catus]
gi|194389826|dbj|BAG60429.1| unnamed protein product [Homo sapiens]
Length = 160
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 78/179 (43%), Gaps = 38/179 (21%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP--------CFVCGSLEHGVRQCSKAQD-CFICKKGGH 233
C+ CG GH A C + R + C+ CG H + C +D C+ C +GGH
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRDICYRCGESGHLAKDCDLQEDACYNCGRGGH 65
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNI 293
AKDC + + + Q C CG GH C D E +CY C FGH+
Sbjct: 66 IAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSCGEFGHI----Q 112
Query: 294 SDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECV 352
D +V C+RCG+ GH ++ + + S +CY CG GH AREC
Sbjct: 113 KDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCGESGHLARECT 155
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KDC
Sbjct: 56 ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDC 115
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CG++GH +C + EV CY C GHL
Sbjct: 116 ---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 150
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 72 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 128
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 129 VAINCS-------KTSEVNCYRCGESGH 149
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 62/163 (38%), Gaps = 53/163 (32%)
Query: 222 AQDCFICKKGGHRAKDCPDKHKSGFQNAQ----VCLKCGDSGHDMFSCRNSYSLDDLKEV 277
+ +CF C + GH A++CP G +C +CG+SGH C DL+E
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRDICYRCGESGHLAKDC-------DLQED 55
Query: 278 QCYICRCFGHL-------------CCVNISDAVPGEVS----------CFRCGQLGHTGL 314
CY C GH+ CC N PG ++ C+ CG+ GH
Sbjct: 56 ACYNCGRGGHIAKDCKEPKREREQCCYNCGK--PGHLARDCDHADEQKCYSCGEFGHI-- 111
Query: 315 HWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKV 357
+ + CY CG GH A C +S+V
Sbjct: 112 ---------------QKDCTKVKCYRCGETGHVAINCSKTSEV 139
>gi|148666815|gb|EDK99231.1| cellular nucleic acid binding protein, isoform CRA_d [Mus musculus]
Length = 204
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 80/189 (42%), Gaps = 48/189 (25%)
Query: 183 CYNCGEEGHMAVNCRSA----------------VKRKKP--CFVCGSLEHGVRQCSKAQD 224
C+ CG GH A C + V P C+ CG H + C +D
Sbjct: 40 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 99
Query: 225 -CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICR 283
C+ C +GGH AKDC + + + Q C CG GH C D E +CY C
Sbjct: 100 ACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSCG 150
Query: 284 CFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGA 343
FGH+ D +V C+RCG+ GH ++ C+++ S +CY CG
Sbjct: 151 EFGHI----QKDCT--KVKCYRCGETGHVAIN-------CSKT-------SEVNCYRCGE 190
Query: 344 EGHFARECV 352
GH AREC
Sbjct: 191 SGHLARECT 199
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KDC
Sbjct: 100 ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDC 159
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CG++GH +C + EV CY C GHL
Sbjct: 160 ---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 194
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 11/81 (13%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH A +C
Sbjct: 123 QCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCS- 178
Query: 241 KHKSGFQNAQV-CLKCGDSGH 260
+ ++V C +CG+SGH
Sbjct: 179 ------KTSEVNCYRCGESGH 193
>gi|158257670|dbj|BAF84808.1| unnamed protein product [Homo sapiens]
Length = 179
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 78/184 (42%), Gaps = 57/184 (30%)
Query: 177 DRGWQ--------TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFIC 228
DRG+Q CY CGE GH+A +C L+ V + C+ C
Sbjct: 40 DRGFQFVSSSLPDICYRCGESGHLAKDC--------------DLQEDV------EACYNC 79
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
+GGH AKDC + + + Q C CG GH C D E +CY C FGH+
Sbjct: 80 GRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSCGEFGHI 130
Query: 289 CCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFA 348
D +V C+RCG+ GH ++ + + S +CY CG GH A
Sbjct: 131 ----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCGESGHLA 170
Query: 349 RECV 352
REC
Sbjct: 171 RECT 174
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 91 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 147
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 148 VAINCS-------KTSEVNCYRCGESGH 168
>gi|9955402|dbj|BAB12217.1| vasa homolog [Ciona savignyi]
Length = 770
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 70/182 (38%), Gaps = 49/182 (26%)
Query: 183 CYNCGEEGHMAVNC--RSAVKRKKPCFVCGSLEHGVRQCSK--------AQDCFICKKGG 232
C+ CGEEGHM+ C R K CF CG H R+C K + CF C + G
Sbjct: 108 CFKCGEEGHMSRECPQGGGGSRGKGCFKCGEEGHMSRECPKGGGGGGGGGRGCFKCGEEG 167
Query: 233 HRAKDCPDKHKSGFQN---AQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC 289
H +++CP SGF+ ++ C KCG+ GH C
Sbjct: 168 HMSRECPKGGDSGFEGRSRSKGCFKCGEEGHMSRECPQGGGGGRGS-------------- 213
Query: 290 CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAR 349
CF+CG+ GH C Q S C+ CG EGH +R
Sbjct: 214 ------------GCFKCGEEGHMS---RECPQG-------GGGGRGSGCFKCGEEGHMSR 251
Query: 350 EC 351
EC
Sbjct: 252 EC 253
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 55/141 (39%), Gaps = 18/141 (12%)
Query: 217 RQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKE 276
R S+++ CF C + GH +++CP + C KCG+ GH C
Sbjct: 100 RGSSRSKGCFKCGEEGHMSRECPQGGGG--SRGKGCFKCGEEGHMSRECPKGGGGGGGGG 157
Query: 277 VQCYICRCFGHL---CCVNISDAVPGEV---SCFRCGQLGHTGLHWNSCMQACARSRGET 330
C+ C GH+ C G CF+CG+ GH C Q
Sbjct: 158 RGCFKCGEEGHMSRECPKGGDSGFEGRSRSKGCFKCGEEGHMS---RECPQG-------G 207
Query: 331 VEASPSSCYNCGAEGHFAREC 351
S C+ CG EGH +REC
Sbjct: 208 GGGRGSGCFKCGEEGHMSREC 228
>gi|58004799|gb|AAW62459.1| cellular nucleic acid binding protein mutant delta-RGG [synthetic
construct]
Length = 162
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 78/181 (43%), Gaps = 40/181 (22%)
Query: 183 CYNCGEEGHMAVNCRSA--------VKRKKP--CFVCGSLEHGVRQCSKAQD-CFICKKG 231
C+ CG GH A C + + P C+ CG H + C +D C+ C +G
Sbjct: 6 CFKCGRTGHWARECPTFSSSRGFQFISSSLPDICYRCGESGHLAKDCDLQEDACYNCGRG 65
Query: 232 GHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCV 291
GH AKDC + K + Q C CG GH C ++ E +CY C FGH+
Sbjct: 66 GHIAKDCKEPRK---EREQCCYNCGKPGHLARDCEHA------DEQKCYSCGEFGHI--- 113
Query: 292 NISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
D +V C+RCG GH ++ + + S +CY CG GH AREC
Sbjct: 114 -QKDCT--KVKCYRCGDTGHVAINCS--------------KTSEVNCYRCGESGHLAREC 156
Query: 352 V 352
Sbjct: 157 T 157
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG GH+A +C+ K R++ C+ CG H R C A Q C+ C + GH KDC
Sbjct: 58 ACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDCEHADEQKCYSCGEFGHIQKDC 117
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CGD+GH +C + EV CY C GHL
Sbjct: 118 ---------TKVKCYRCGDTGHVAINCSKT------SEVNCYRCGESGHL 152
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C GH
Sbjct: 74 EPRKEREQCCYNCGKPGHLARDCEHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGDTGH 130
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 131 VAINCS-------KTSEVNCYRCGESGH 151
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 65/165 (39%), Gaps = 55/165 (33%)
Query: 222 AQDCFICKKGGHRAKDCPDKHKS-GFQNAQ-----VCLKCGDSGHDMFSCRNSYSLDDLK 275
+ +CF C + GH A++CP S GFQ +C +CG+SGH C DL+
Sbjct: 3 SNECFKCGRTGHWARECPTFSSSRGFQFISSSLPDICYRCGESGHLAKDC-------DLQ 55
Query: 276 EVQCYICRCFGHL-------------CCVNISDAVPGEVS----------CFRCGQLGHT 312
E CY C GH+ CC N PG ++ C+ CG+ GH
Sbjct: 56 EDACYNCGRGGHIAKDCKEPRKEREQCCYNCGK--PGHLARDCEHADEQKCYSCGEFGHI 113
Query: 313 GLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKV 357
+ + CY CG GH A C +S+V
Sbjct: 114 -----------------QKDCTKVKCYRCGDTGHVAINCSKTSEV 141
>gi|387914596|gb|AFK10907.1| cellular nucleic acid-binding protein-like protein [Callorhinchus
milii]
Length = 167
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 77/185 (41%), Gaps = 45/185 (24%)
Query: 183 CYNCGEEGHMAVNCRSA---------------VKRKKPCFVCGSLEHGVRQCSKAQD-CF 226
C+ CG GH A C + + C+ CG H + C +D C+
Sbjct: 6 CFKCGRTGHWARECPTGGGRVRGIRGRCKIGFTAARDICYRCGESGHLAKDCDLQEDACY 65
Query: 227 ICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFG 286
C KGGH AKDC + K + Q C CG GH C D E +CY C FG
Sbjct: 66 NCGKGGHIAKDCKEPKK---EREQCCYNCGKPGHLARDC------DHADEQKCYSCGEFG 116
Query: 287 HLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGH 346
H+ D +V C+RCG+ GH ++ + + S +CY CG GH
Sbjct: 117 HI----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCGEAGH 156
Query: 347 FAREC 351
AREC
Sbjct: 157 LAREC 161
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 54/110 (49%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG+ GH+A +C+ K R++ C+ CG H R C A Q C+ C + GH KDC
Sbjct: 63 ACYNCGKGGHIAKDCKEPKKEREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDC 122
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CG++GH +C + EV CY C GHL
Sbjct: 123 ---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGEAGHL 157
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 79 EPKKEREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 135
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG++GH
Sbjct: 136 VAINCS-------KTSEVNCYRCGEAGH 156
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 66/170 (38%), Gaps = 60/170 (35%)
Query: 222 AQDCFICKKGGHRAKDCPDKH----------KSGFQNAQ-VCLKCGDSGHDMFSCRNSYS 270
+ +CF C + GH A++CP K GF A+ +C +CG+SGH C
Sbjct: 3 SNECFKCGRTGHWARECPTGGGRVRGIRGRCKIGFTAARDICYRCGESGHLAKDC----- 57
Query: 271 LDDLKEVQCYICRCFGHL-------------CCVNISDAVPGEVS----------CFRCG 307
DL+E CY C GH+ CC N PG ++ C+ CG
Sbjct: 58 --DLQEDACYNCGKGGHIAKDCKEPKKEREQCCYNCGK--PGHLARDCDHADEQKCYSCG 113
Query: 308 QLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKV 357
+ GH + + CY CG GH A C +S+V
Sbjct: 114 EFGHI-----------------QKDCTKVKCYRCGETGHVAINCSKTSEV 146
>gi|392881264|gb|AFM89464.1| cellular nucleic acid-binding protein-like protein [Callorhinchus
milii]
Length = 167
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 77/185 (41%), Gaps = 45/185 (24%)
Query: 183 CYNCGEEGHMAVNCRSA---------------VKRKKPCFVCGSLEHGVRQCSKAQD-CF 226
C+ CG GH A C + + C+ CG H + C +D C+
Sbjct: 6 CFKCGRTGHWARECPTGGGRVRGIRGRCKIGFTAARDICYRCGESGHLAKDCDLQEDACY 65
Query: 227 ICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFG 286
C KGGH AKDC + K + Q C CG GH C D E +CY C FG
Sbjct: 66 NCGKGGHIAKDCKEPKK---EREQCCYNCGKPGHLARDC------DHADEQKCYSCGEFG 116
Query: 287 HLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGH 346
H+ D +V C+RCG+ GH ++ + + S +CY CG GH
Sbjct: 117 HI----RKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCGEAGH 156
Query: 347 FAREC 351
AREC
Sbjct: 157 LAREC 161
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 54/110 (49%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG+ GH+A +C+ K R++ C+ CG H R C A Q C+ C + GH KDC
Sbjct: 63 ACYNCGKGGHIAKDCKEPKKEREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIRKDC 122
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CG++GH +C + EV CY C GHL
Sbjct: 123 ---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGEAGHL 157
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 79 EPKKEREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIRKDCTKVK-CYRCGETGH 135
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG++GH
Sbjct: 136 VAINCS-------KTSEVNCYRCGEAGH 156
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 66/170 (38%), Gaps = 60/170 (35%)
Query: 222 AQDCFICKKGGHRAKDCPDKH----------KSGFQNAQ-VCLKCGDSGHDMFSCRNSYS 270
+ +CF C + GH A++CP K GF A+ +C +CG+SGH C
Sbjct: 3 SNECFKCGRTGHWARECPTGGGRVRGIRGRCKIGFTAARDICYRCGESGHLAKDC----- 57
Query: 271 LDDLKEVQCYICRCFGHL-------------CCVNISDAVPGEVS----------CFRCG 307
DL+E CY C GH+ CC N PG ++ C+ CG
Sbjct: 58 --DLQEDACYNCGKGGHIAKDCKEPKKEREQCCYNCGK--PGHLARDCDHADEQKCYSCG 113
Query: 308 QLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKV 357
+ GH + + CY CG GH A C +S+V
Sbjct: 114 EFGHI-----------------RKDCTKVKCYRCGETGHVAINCSKTSEV 146
>gi|3661541|gb|AAC61751.1| poly-zinc finger protein 1 [Trypanosoma cruzi]
Length = 193
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 69/154 (44%), Gaps = 17/154 (11%)
Query: 173 FDPPDRGWQTCYNCGEEGHMAVNCRS---AVKRKKPCFVCGSLEHGVRQCSK-------A 222
P G + CYNCG+ GH++ C + + C+ CG H R+C
Sbjct: 36 IPPGAMGDRACYNCGQPGHLSRGCPTRPPGAMGGRACYNCGQPGHPSRECPTRPPGAMGG 95
Query: 223 QDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN--SYSLDDLKEVQCY 280
+ C+ C + GH +++CP + G + C KCG GH C N + + CY
Sbjct: 96 RACYNCGQPGHLSRECPTR-PPGTMGDRACYKCGRMGHLSRECPNRPAGGFRGVARGACY 154
Query: 281 ICRCFGHLC--CVNISDAVPGEVSCFRCGQLGHT 312
C+ GHL C N GE +C+ CGQ GHT
Sbjct: 155 HCQQEGHLARDCPNAPPG--GERACYNCGQTGHT 186
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 73/188 (38%), Gaps = 28/188 (14%)
Query: 179 GWQTCYNCGEEGHMAVNCRS---AVKRKKPCFVCGSLEHGVRQCSK-------AQDCFIC 228
G TC+ CGE GH A C + + C+ CG H R C + C+ C
Sbjct: 16 GGSTCHRCGETGHFARECPNIPPGAMGDRACYNCGQPGHLSRGCPTRPPGAMGGRACYNC 75
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
+ GH +++CP + G + C CG GH C + + + CY C GHL
Sbjct: 76 GQPGHPSRECPTR-PPGAMGGRACYNCGQPGHLSREC-PTRPPGTMGDRACYKCGRMGHL 133
Query: 289 ---CCVNISDAVPGEV--SCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGA 343
C + G +C+ C Q GH AR +CYNCG
Sbjct: 134 SRECPNRPAGGFRGVARGACYHCQQEGHL-----------ARDCPNAPPGGERACYNCGQ 182
Query: 344 EGHFAREC 351
GH +R C
Sbjct: 183 TGHTSRAC 190
>gi|164656387|ref|XP_001729321.1| hypothetical protein MGL_3356 [Malassezia globosa CBS 7966]
gi|159103212|gb|EDP42107.1| hypothetical protein MGL_3356 [Malassezia globosa CBS 7966]
Length = 171
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 69/145 (47%), Gaps = 13/145 (8%)
Query: 176 PDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ--------DCFI 227
P G TCYNCG++GH++V+C + K CF C H R+C A+ +C+
Sbjct: 21 PSAGNPTCYNCGQQGHVSVDCTNQPVPKT-CFRCNEAGHVSRECPHAEARGDAAAGECYR 79
Query: 228 CKKGGHRAKDCPDKHKSGF-QNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFG 286
C + GH A+ CP SG +N + C CG GH C ++ ++CY C G
Sbjct: 80 CGETGHIARMCPVSGGSGAPRNPRACYNCGGVGHLSRDCSSAPGAAATASMKCYNCGNMG 139
Query: 287 HLCCVNISDAVPGEVSCFRCGQLGH 311
HL + P + SC+ CG H
Sbjct: 140 HL---SRECPRPSQRSCYTCGSSDH 161
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 75/179 (41%), Gaps = 23/179 (12%)
Query: 180 WQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK---AQDCFICKKGGHRAK 236
++CYNCG GH C SA C+ CG H C+ + CF C + GH ++
Sbjct: 4 MRSCYNCGRPGHTIAACPSAGNPT--CYNCGQQGHVSVDCTNQPVPKTCFRCNEAGHVSR 61
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQ-CYICRCFGHL---CCVN 292
+CP G A C +CG++GH C S + + CY C GHL C
Sbjct: 62 ECPHAEARGDAAAGECYRCGETGHIARMCPVSGGSGAPRNPRACYNCGGVGHLSRDCSSA 121
Query: 293 ISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
A + C+ CG +GH SR E S SCY CG+ H A +C
Sbjct: 122 PGAAATASMKCYNCGNMGHL-------------SR-ECPRPSQRSCYTCGSSDHLAAQC 166
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 178 RGWQTCYNCGEEGHMAVNCRSA----VKRKKPCFVCGSLEHGVRQCSKA--QDCFICKKG 231
R + CYNCG GH++ +C SA C+ CG++ H R+C + + C+ C
Sbjct: 100 RNPRACYNCGGVGHLSRDCSSAPGAAATASMKCYNCGNMGHLSRECPRPSQRSCYTCGSS 159
Query: 232 GHRAKDCPD 240
H A CP
Sbjct: 160 DHLAAQCPQ 168
>gi|71651603|ref|XP_814476.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70879451|gb|EAN92625.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 503
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 72/165 (43%), Gaps = 34/165 (20%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C+ C + GHMA C + R CF CGS H + C CF C GHR+ DCP K
Sbjct: 92 CFQCHQRGHMAPTC--PLTR---CFNCGSYGHSSQLCYSRPLCFHCSLAGHRSTDCPMKP 146
Query: 243 KSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVS 302
K +VC +C + GH+M C + C++C GHL A E
Sbjct: 147 K-----GRVCYRCKEPGHEMAECTQT--------ALCHMCNQAGHLV------AQCPEAV 187
Query: 303 CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHF 347
C C + GHT AC +SR +A P S +C EG F
Sbjct: 188 CNLCHERGHTA-------SACLKSRFINYKA-PHSIESC--EGPF 222
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 71/195 (36%), Gaps = 44/195 (22%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP--------CFVCGSLEHGVRQC---SKAQDCFICKK 230
TC CG GH +C S KR + C CGS H C S++ +CF C +
Sbjct: 38 TCRACGRLGHFKEDCPSEKKRARAEEDGEVSVCRSCGSSRHVKASCPLRSQSVECFQCHQ 97
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCC 290
GH A CP C CG GH C YS C+ C GH
Sbjct: 98 RGHMAPTCPLTR---------CFNCGSYGHSSQLC---YS-----RPLCFHCSLAGHR-- 138
Query: 291 VNISDAVPGEVSCFRCGQLGH-------TGLHWNSCMQACARSRGETVEASPSS-CYNCG 342
P C+RC + GH T L + C QA G V P + C C
Sbjct: 139 STDCPMKPKGRVCYRCKEPGHEMAECTQTAL-CHMCNQA-----GHLVAQCPEAVCNLCH 192
Query: 343 AEGHFARECVSSSKV 357
GH A C+ S +
Sbjct: 193 ERGHTASACLKSRFI 207
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 61/164 (37%), Gaps = 22/164 (13%)
Query: 202 RKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQN----AQVCLKCGD 257
R C C + +H R C C C + GH +DCP + K VC CG
Sbjct: 17 RGLTCSNCSATDHLRRDCPLVT-CRACGRLGHFKEDCPSEKKRARAEEDGEVSVCRSCGS 75
Query: 258 SGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWN 317
S H SC + V+C+ C GH+ + P CF CG GH+
Sbjct: 76 SRHVKASCPLRS-----QSVECFQCHQRGHM-----APTCP-LTRCFNCGSYGHSSQLCY 124
Query: 318 S------CMQACARSRGETVEASPSSCYNCGAEGHFARECVSSS 355
S C A RS ++ CY C GH EC ++
Sbjct: 125 SRPLCFHCSLAGHRSTDCPMKPKGRVCYRCKEPGHEMAECTQTA 168
>gi|71654802|ref|XP_816013.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70881113|gb|EAN94162.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 503
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 72/165 (43%), Gaps = 34/165 (20%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C+ C + GHMA C + R CF CGS H + C CF C GHR+ DCP K
Sbjct: 92 CFQCHQRGHMAPTC--PLTR---CFNCGSYGHSSQLCYSRPLCFHCSLAGHRSTDCPMKP 146
Query: 243 KSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVS 302
K +VC +C + GH+M C + C++C GHL A E
Sbjct: 147 K-----GRVCYRCKEPGHEMAECTQT--------ALCHMCNQAGHLV------AQCPEAV 187
Query: 303 CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHF 347
C C + GHT AC +SR +A P S +C EG F
Sbjct: 188 CNLCHERGHTA-------SACLKSRFINYKA-PHSIESC--EGPF 222
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 71/195 (36%), Gaps = 44/195 (22%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP--------CFVCGSLEHGVRQC---SKAQDCFICKK 230
TC CG GH +C S KR + C CGS H C S++ +CF C +
Sbjct: 38 TCRACGRLGHFKEDCPSEKKRARAEEDGEVSVCRSCGSSRHVKASCPLRSQSVECFQCHQ 97
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCC 290
GH A CP C CG GH C YS C+ C GH
Sbjct: 98 RGHMAPTCPLTR---------CFNCGSYGHSSQLC---YS-----RPLCFHCSLAGHR-- 138
Query: 291 VNISDAVPGEVSCFRCGQLGH-------TGLHWNSCMQACARSRGETVEASPSS-CYNCG 342
P C+RC + GH T L + C QA G V P + C C
Sbjct: 139 STDCPMKPKGRVCYRCKEPGHEMAECTQTAL-CHMCNQA-----GHLVAQCPEAVCNLCH 192
Query: 343 AEGHFARECVSSSKV 357
GH A C+ S +
Sbjct: 193 ERGHTASACLKSRFI 207
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 61/164 (37%), Gaps = 22/164 (13%)
Query: 202 RKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQN----AQVCLKCGD 257
R C C + +H R C C C + GH +DCP + K VC CG
Sbjct: 17 RGLTCSNCSATDHLRRDCPLVT-CRACGRLGHFKEDCPSEKKRARAEEDGEVSVCRSCGS 75
Query: 258 SGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWN 317
S H SC + V+C+ C GH+ + P CF CG GH+
Sbjct: 76 SRHVKASCPLRS-----QSVECFQCHQRGHM-----APTCP-LTRCFNCGSYGHSSQLCY 124
Query: 318 S------CMQACARSRGETVEASPSSCYNCGAEGHFARECVSSS 355
S C A RS ++ CY C GH EC ++
Sbjct: 125 SRPLCFHCSLAGHRSTDCPMKPKGRVCYRCKEPGHEMAECTQTA 168
>gi|187608726|ref|NP_001120664.1| cellular nucleic acid-binding protein isoform 1 [Homo sapiens]
gi|291393354|ref|XP_002713209.1| PREDICTED: zinc finger protein 9 isoform 1 [Oryctolagus cuniculus]
gi|355564532|gb|EHH21032.1| hypothetical protein EGK_04008 [Macaca mulatta]
gi|355786375|gb|EHH66558.1| hypothetical protein EGM_03574 [Macaca fascicularis]
Length = 179
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 78/184 (42%), Gaps = 57/184 (30%)
Query: 177 DRGWQ--------TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFIC 228
DRG+Q CY CGE GH+A +C L+ V + C+ C
Sbjct: 40 DRGFQFVSSSLPDICYRCGESGHLAKDC--------------DLQEDV------EACYNC 79
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
+GGH AKDC + + + Q C CG GH C D E +CY C FGH+
Sbjct: 80 GRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSCGEFGHI 130
Query: 289 CCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFA 348
D +V C+RCG+ GH ++ + + S +CY CG GH A
Sbjct: 131 ----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCGESGHLA 170
Query: 349 RECV 352
REC
Sbjct: 171 RECT 174
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 91 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 147
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 148 VAINCS-------KTSEVNCYRCGESGH 168
>gi|148535009|gb|ABQ85432.1| CCHC-type zinc finger [Cricetulus griseus]
Length = 164
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 78/184 (42%), Gaps = 58/184 (31%)
Query: 177 DRGWQ--------TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFIC 228
DRG+Q CY CGE GH+A +C ++ + C+ CG
Sbjct: 26 DRGFQFVSSSLPDICYRCGESGHLAKDCD--LQEDEACYNCG------------------ 65
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
+GGH AKDC + + + Q C CG GH C D E +CY C FGH+
Sbjct: 66 -RGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSCGEFGHI 115
Query: 289 CCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFA 348
D +V C+RCG+ GH ++ + + S +CY CG GH A
Sbjct: 116 ----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCGESGHLA 155
Query: 349 RECV 352
REC
Sbjct: 156 RECT 159
>gi|149728229|ref|XP_001488727.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 3
[Equus caballus]
gi|291393358|ref|XP_002713211.1| PREDICTED: zinc finger protein 9 isoform 3 [Oryctolagus cuniculus]
gi|296225968|ref|XP_002758717.1| PREDICTED: cellular nucleic acid-binding protein isoform 2
[Callithrix jacchus]
gi|332261809|ref|XP_003279959.1| PREDICTED: cellular nucleic acid-binding protein isoform 3
[Nomascus leucogenys]
gi|397518584|ref|XP_003829464.1| PREDICTED: cellular nucleic acid-binding protein isoform 3 [Pan
paniscus]
gi|402887091|ref|XP_003906938.1| PREDICTED: cellular nucleic acid-binding protein [Papio anubis]
gi|410037475|ref|XP_003950235.1| PREDICTED: uncharacterized protein LOC460682 [Pan troglodytes]
gi|410951818|ref|XP_003982590.1| PREDICTED: cellular nucleic acid-binding protein isoform 3 [Felis
catus]
gi|16549164|dbj|BAB70769.1| unnamed protein product [Homo sapiens]
gi|119599677|gb|EAW79271.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein), isoform CRA_a [Homo sapiens]
gi|119599680|gb|EAW79274.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein), isoform CRA_a [Homo sapiens]
Length = 167
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 77/186 (41%), Gaps = 45/186 (24%)
Query: 183 CYNCGEEGHMAVNCRSA---------------VKRKKPCFVCGSLEHGVRQCSKAQD-CF 226
C+ CG GH A C + + C+ CG H + C +D C+
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRDICYRCGESGHLAKDCDLQEDACY 65
Query: 227 ICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFG 286
C +GGH AKDC + + + Q C CG GH C D E +CY C FG
Sbjct: 66 NCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSCGEFG 116
Query: 287 HLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGH 346
H+ D +V C+RCG+ GH ++ + + S +CY CG GH
Sbjct: 117 HI----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCGESGH 156
Query: 347 FARECV 352
AREC
Sbjct: 157 LARECT 162
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KDC
Sbjct: 63 ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDC 122
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CG++GH +C + EV CY C GHL
Sbjct: 123 ---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 157
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 79 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 135
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 136 VAINCS-------KTSEVNCYRCGESGH 156
>gi|417396563|gb|JAA45315.1| Putative e3 ubiquitin ligase [Desmodus rotundus]
Length = 178
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 78/184 (42%), Gaps = 58/184 (31%)
Query: 177 DRGWQ--------TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFIC 228
DRG+Q CY CGE GH+A +C ++ + C+ CG
Sbjct: 40 DRGFQFVSSSLSDICYRCGESGHLAKDCD--LQEDEACYNCG------------------ 79
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
+GGH AKDC + + + Q C CG GH C D E +CY C FGH+
Sbjct: 80 -RGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSCGEFGHI 129
Query: 289 CCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFA 348
D +V C+RCG+ GH ++ + + S +CY CG GH A
Sbjct: 130 ----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCGESGHLA 169
Query: 349 RECV 352
REC
Sbjct: 170 RECT 173
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 90 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 146
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 147 VAINCS-------KTSEVNCYRCGESGH 167
>gi|147899284|ref|NP_001084082.1| cellular nucleic acid binding protein [Xenopus laevis]
gi|1055224|gb|AAA81168.1| cellular nucleic acid binding protein [Xenopus laevis]
Length = 168
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 78/187 (41%), Gaps = 46/187 (24%)
Query: 183 CYNCGEEGHMAVNCRSAVKR----------------KKPCFVCGSLEHGVRQCSKAQD-C 225
C+ CG GH A C + R + C+ CG H + C +D C
Sbjct: 6 CFKCGRTGHWARECPTGGGRGRGGGRGRGRGGFSSSRDICYRCGESGHLAKDCDLQEDAC 65
Query: 226 FICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCF 285
+ C +GGH AKDC + K + Q C CG GH C D E +CY C F
Sbjct: 66 YNCGRGGHIAKDCKEPRK---EREQCCYNCGKPGHLARDC------DHADEHRCYSCGEF 116
Query: 286 GHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEG 345
GH+ D +V C+RCG+ GH ++ + + S +CY CG G
Sbjct: 117 GHI----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCGESG 156
Query: 346 HFARECV 352
H AREC
Sbjct: 157 HLARECT 163
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 60/132 (45%), Gaps = 40/132 (30%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDC--P 239
CYNCG GH+A +C+ K ++ C C+ C K GH A+DC
Sbjct: 64 ACYNCGRGGHIAKDCKEPRKEREQC------------------CYNCGKPGHLARDCDHA 105
Query: 240 DKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPG 299
D+H+ C CG+ GH D +V+CY C GH V I+ +
Sbjct: 106 DEHR--------CYSCGEFGHIQ---------KDCTKVKCYRCGETGH---VAINCSKTS 145
Query: 300 EVSCFRCGQLGH 311
EV+C+RCG+ GH
Sbjct: 146 EVNCYRCGESGH 157
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A + + C+ CG H + C+K + C+ C + GH
Sbjct: 80 EPRKEREQCCYNCGKPGHLARDCDHADEHR--CYSCGEFGHIQKDCTKVK-CYRCGETGH 136
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 137 VAINCS-------KTSEVNCYRCGESGH 157
>gi|403413797|emb|CCM00497.1| predicted protein [Fibroporia radiculosa]
Length = 178
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 37/185 (20%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCS---KAQDCFICKKGGHRAKDCP 239
C+NCG GH A NC A C+ CG H ++C+ KA+ C+ C + GH ++DCP
Sbjct: 7 CFNCGGFGHQAANCPKA--GTPTCYNCGLEGHVSKECTSETKAKACYRCGQEGHISRDCP 64
Query: 240 DKHKS-----GFQNAQVCLKCGDSGHDMFSCRNSYSLD--------DLKEVQCYICRCFG 286
D + G + C +CG +GH +C ++ S + CY C G
Sbjct: 65 DAANAPPGAIGGASTTECYRCGKTGHIARTCPDAASGGGYGGGGGGNFGSKTCYTCGGVG 124
Query: 287 HLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGH 346
HL D V G C+ C +GH SR + + +CY CG+EGH
Sbjct: 125 HL----SRDCVQGS-KCYNCSGVGHI-------------SR-DCPQPQRRACYTCGSEGH 165
Query: 347 FAREC 351
+R+C
Sbjct: 166 ISRDC 170
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 60/146 (41%), Gaps = 19/146 (13%)
Query: 220 SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQC 279
+ + CF C GH+A +CP K+G C CG GH C + K C
Sbjct: 2 ASGRGCFNCGGFGHQAANCP---KAG---TPTCYNCGLEGHVSKEC-----TSETKAKAC 50
Query: 280 YICRCFGHLC--CVNISDAVPGEVS------CFRCGQLGHTGLHWNSCMQACARSRGETV 331
Y C GH+ C + ++A PG + C+RCG+ GH G
Sbjct: 51 YRCGQEGHISRDCPDAANAPPGAIGGASTTECYRCGKTGHIARTCPDAASGGGYGGGGGG 110
Query: 332 EASPSSCYNCGAEGHFARECVSSSKV 357
+CY CG GH +R+CV SK
Sbjct: 111 NFGSKTCYTCGGVGHLSRDCVQGSKC 136
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ--DCFICKKGGHRAK 236
G +TCY CG GH++ +C K C+ C + H R C + Q C+ C GH ++
Sbjct: 113 GSKTCYTCGGVGHLSRDCVQGSK----CYNCSGVGHISRDCPQPQRRACYTCGSEGHISR 168
Query: 237 DCP 239
DCP
Sbjct: 169 DCP 171
>gi|291409840|ref|XP_002721202.1| PREDICTED: cellular nucleic acid binding protein-like isoform 1
[Oryctolagus cuniculus]
Length = 168
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 77/187 (41%), Gaps = 46/187 (24%)
Query: 183 CYNCGEEGHMAVNCRSA---------------VKRKKPCFVCGSLEHGVRQCSKAQD--C 225
C+ CG GH A C + + C+ CG H + C +D C
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRDICYRCGESGHLAKDCDLQEDEAC 65
Query: 226 FICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCF 285
+ C +GGH AKDC + + + Q C CG GH C D E +CY C F
Sbjct: 66 YNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSCGEF 116
Query: 286 GHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEG 345
GH+ D +V C+RCG+ GH ++ + + S +CY CG G
Sbjct: 117 GHI----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCGESG 156
Query: 346 HFARECV 352
H AREC
Sbjct: 157 HLARECT 163
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 54/111 (48%), Gaps = 18/111 (16%)
Query: 181 QTCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKD 237
+ CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KD
Sbjct: 63 EACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKD 122
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C C +CG++GH +C + EV CY C GHL
Sbjct: 123 C---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 158
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 80 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 136
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 137 VAINCS-------KTSEVNCYRCGESGH 157
>gi|7304969|ref|NP_038521.1| cellular nucleic acid-binding protein isoform 1 [Mus musculus]
gi|187608732|ref|NP_001120665.1| cellular nucleic acid-binding protein isoform 2 [Homo sapiens]
gi|395847858|ref|XP_003796581.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 1
[Otolemur garnettii]
gi|395847860|ref|XP_003796582.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 2
[Otolemur garnettii]
gi|395847862|ref|XP_003796583.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 3
[Otolemur garnettii]
gi|50403746|sp|P53996.2|CNBP_MOUSE RecName: Full=Cellular nucleic acid-binding protein; Short=CNBP;
AltName: Full=Zinc finger protein 9
gi|854675|gb|AAB60490.1| cellular nucleic acid binding protein [Mus musculus]
gi|30059133|gb|AAO31613.1| cellular nucleic acid binding protein [Mus musculus]
gi|37194897|gb|AAH58723.1| Cellular nucleic acid binding protein [Mus musculus]
gi|40738015|gb|AAR89463.1| cellular nucleic acid binding protein [Mus musculus]
gi|54696094|gb|AAV38419.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein) [Homo sapiens]
gi|68304555|gb|AAY89856.1| cellular nucleic acid binding protein alpha variant 1 [Homo
sapiens]
gi|74194928|dbj|BAE26042.1| unnamed protein product [Mus musculus]
gi|74204641|dbj|BAE35390.1| unnamed protein product [Mus musculus]
gi|310756754|gb|ADP20518.1| cellular nucleic acid binding protein [Heterocephalus glaber]
Length = 178
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 78/184 (42%), Gaps = 58/184 (31%)
Query: 177 DRGWQ--------TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFIC 228
DRG+Q CY CGE GH+A +C ++ + C+ CG
Sbjct: 40 DRGFQFVSSSLPDICYRCGESGHLAKDCD--LQEDEACYNCG------------------ 79
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
+GGH AKDC + + + Q C CG GH C D E +CY C FGH+
Sbjct: 80 -RGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSCGEFGHI 129
Query: 289 CCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFA 348
D +V C+RCG+ GH ++ + + S +CY CG GH A
Sbjct: 130 ----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCGESGHLA 169
Query: 349 RECV 352
REC
Sbjct: 170 RECT 173
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 90 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 146
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 147 VAINCS-------KTSEVNCYRCGESGH 167
>gi|345329903|ref|XP_003431441.1| PREDICTED: cellular nucleic acid-binding protein-like
[Ornithorhynchus anatinus]
Length = 167
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 78/186 (41%), Gaps = 45/186 (24%)
Query: 183 CYNCGEEGHMAVNCRSAVKR---------------KKPCFVCGSLEHGVRQCSKAQD-CF 226
C+ CG GH A C + R + C+ CG H + C +D C+
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGLRSRGRGGFSSGRDICYRCGESGHLAKDCDLQEDACY 65
Query: 227 ICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFG 286
C +GGH AKDC + + + Q C CG GH C D E +CY C FG
Sbjct: 66 NCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSCGEFG 116
Query: 287 HLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGH 346
H+ D +V C+RCG+ GH ++ + + S +CY CG GH
Sbjct: 117 HI----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCGESGH 156
Query: 347 FARECV 352
AREC
Sbjct: 157 LARECT 162
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KDC
Sbjct: 63 ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDC 122
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CG++GH +C + EV CY C GHL
Sbjct: 123 ---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 157
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 79 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 135
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 136 VAINCS-------KTSEVNCYRCGESGH 156
>gi|310756752|gb|ADP20517.1| cellular nucleic acid binding protein [Fukomys anselli]
Length = 178
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 78/184 (42%), Gaps = 58/184 (31%)
Query: 177 DRGWQ--------TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFIC 228
DRG+Q CY CGE GH+A +C ++ + C+ CG
Sbjct: 40 DRGFQFVSSSLPDICYRCGESGHLAKDCD--LQEDEACYNCG------------------ 79
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
+GGH AKDC + + + Q C CG GH C D E +CY C FGH+
Sbjct: 80 -RGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSCGEFGHI 129
Query: 289 CCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFA 348
D +V C+RCG+ GH ++ + + S +CY CG GH A
Sbjct: 130 ----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCGESGHLA 169
Query: 349 RECV 352
REC
Sbjct: 170 RECT 173
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 90 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 146
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 147 VAINCS-------KTSEVNCYRCGESGH 167
>gi|407399797|gb|EKF28436.1| hypothetical protein MOQ_007815 [Trypanosoma cruzi marinkellei]
Length = 509
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 64/140 (45%), Gaps = 27/140 (19%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C+ C + GHMA C + R CF CGS H + C CF C GHR+ DCP K
Sbjct: 98 CFQCHQRGHMAPTC--PLTR---CFNCGSYGHSSQLCYSRPLCFHCSLAGHRSTDCPMKP 152
Query: 243 KSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVS 302
K +VC +C + GH+M C + C++C GHL A E
Sbjct: 153 K-----GRVCYRCKEPGHEMAECTQT--------ALCHMCNQAGHLI------AQCPEAI 193
Query: 303 CFRCGQLGHTGLHWNSCMQA 322
C C + GHT ++C++A
Sbjct: 194 CNLCHERGHTA---SACLKA 210
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 74/206 (35%), Gaps = 47/206 (22%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP--------CFVCGSLEHGVRQC---SKAQDCFICKK 230
TC CG GH +C S KR + C CGS H C S++ +CF C +
Sbjct: 44 TCRACGRLGHFKEDCPSENKRARAEEDGEVSVCRSCGSSRHVKASCPLRSQSVECFQCHQ 103
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCC 290
GH A CP C CG GH C YS C+ C GH
Sbjct: 104 RGHMAPTCPLTR---------CFNCGSYGHSSQLC---YS-----RPLCFHCSLAGHR-- 144
Query: 291 VNISDAVPGEVSCFRCGQLGH-------TGLHWNSCMQACARSRGETVEASPSS-CYNCG 342
P C+RC + GH T L + C QA G + P + C C
Sbjct: 145 STDCPMKPKGRVCYRCKEPGHEMAECTQTAL-CHMCNQA-----GHLIAQCPEAICNLCH 198
Query: 343 AEGHFARECVSSSKVRKRNIDASTPT 368
GH A C+ K R N S T
Sbjct: 199 ERGHTASACL---KARFTNYKTSHAT 221
>gi|254569552|ref|XP_002491886.1| Protein with seven cysteine-rich CCHC zinc-finger motifs, similar
to human CNBP [Komagataella pastoris GS115]
gi|238031683|emb|CAY69606.1| Protein with seven cysteine-rich CCHC zinc-finger motifs, similar
to human CNBP [Komagataella pastoris GS115]
gi|328351614|emb|CCA38013.1| Zinc finger protein GIS2 [Komagataella pastoris CBS 7435]
Length = 171
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 81/187 (43%), Gaps = 34/187 (18%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
+TC+ CGE GH+A NC+ + +K C+ C + H C + ++ C+ C + GH
Sbjct: 8 RTCFKCGEVGHLAENCQ---QEQKLCYNCRAPGHESNDCPEPKQTSSKQCYNCNETGHVQ 64
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQ-----CYICRCFGHLCC 290
+C K A C CG GH C NS S V CY C H
Sbjct: 65 SECEQPKK-----AAKCYSCGKLGHFSRHCPNSSSASSAGPVASSSTICYKCSGPNHF-- 117
Query: 291 VNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARE 350
D G C+ CG+LGH + C S G T +CYNCG +GH +R+
Sbjct: 118 --ARDCQAGSPKCYACGKLGHIS-------KDCTVSGGST-----KACYNCGEQGHISRD 163
Query: 351 CVSSSKV 357
C +++
Sbjct: 164 CPPTAEA 170
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 36/159 (22%)
Query: 198 SAVKRKKPCFVCGSLEHGVRQCSKAQD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCG 256
+AV + CF CG + H C + Q C+ C+ GH + DCP+ ++ +++ C C
Sbjct: 2 AAVFFPRTCFKCGEVGHLAENCQQEQKLCYNCRAPGHESNDCPEPKQT---SSKQCYNCN 58
Query: 257 DSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHW 316
++GH C K +CY CG+LGH H
Sbjct: 59 ETGHVQSECE-----QPKKAAKCY------------------------SCGKLGHFSRH- 88
Query: 317 NSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSS 355
C + + S V +S + CY C HFAR+C + S
Sbjct: 89 --CPNSSSASSAGPVASSSTICYKCSGPNHFARDCQAGS 125
>gi|198428174|ref|XP_002131234.1| PREDICTED: similar to universal minicircle sequence binding protein
(UMSBP), putative isoform 2 [Ciona intestinalis]
Length = 310
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 84/209 (40%), Gaps = 64/209 (30%)
Query: 178 RGWQTCYNCGEEGHMAVNCRS----AVKR---KKP--------CFVCGSLEHGVRQCSKA 222
R CY CG GH A C + ++R ++P CF CG H R C A
Sbjct: 107 RDADVCYKCGTPGHFARECPNDAADGIQRNEDRRPMGRRNNDYCFRCGQPGHMARDCLSA 166
Query: 223 QD------------CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC----- 265
++ C+ C K GH A+DCP+ + C KCG +GH C
Sbjct: 167 ENGRSRTGATNINTCYNCYKEGHLARDCPEDN--------ACYKCGKAGHLARKCPEDAD 218
Query: 266 RNSYSLDDLKEV---QCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQA 322
RN + + +E QCY+C+ GH+ A E +C+RC GH +
Sbjct: 219 RNGDARLNRREAGTKQCYLCQNVGHI------QANCPEATCYRCHGEGHIA-------RD 265
Query: 323 CARSRGETVEASPSSCYNCGAEGHFAREC 351
C E CYNC GH AR+C
Sbjct: 266 CPNGNEE--------CYNCRRPGHKARDC 286
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 57/149 (38%), Gaps = 20/149 (13%)
Query: 225 CFICKKGGHRAKDCP-----------DKHKSGFQNAQVCLKCGDSGH---DMFSCRNSYS 270
C+ C GH A++CP D+ G +N C +CG GH D S N S
Sbjct: 112 CYKCGTPGHFARECPNDAADGIQRNEDRRPMGRRNNDYCFRCGQPGHMARDCLSAENGRS 171
Query: 271 LDDLKEVQ-CYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGE 329
+ CY C GHL + P + +C++CG+ GH +R
Sbjct: 172 RTGATNINTCYNCYKEGHL-----ARDCPEDNACYKCGKAGHLARKCPEDADRNGDARLN 226
Query: 330 TVEASPSSCYNCGAEGHFARECVSSSKVR 358
EA CY C GH C ++ R
Sbjct: 227 RREAGTKQCYLCQNVGHIQANCPEATCYR 255
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 55/137 (40%), Gaps = 37/137 (27%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD----------------C 225
TCYNC +EGH+A +C C+ CG H R+C + D C
Sbjct: 180 TCYNCYKEGHLARDC----PEDNACYKCGKAGHLARKCPEDADRNGDARLNRREAGTKQC 235
Query: 226 FICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCF 285
++C+ GH +CP+ C +C GH C N +CY CR
Sbjct: 236 YLCQNVGHIQANCPEA---------TCYRCHGEGHIARDCPNG-------NEECYNCRRP 279
Query: 286 GHLCCVNISDAVPGEVS 302
GH + + PGE+S
Sbjct: 280 GHK-ARDCDEPRPGELS 295
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 65/177 (36%), Gaps = 62/177 (35%)
Query: 224 DCFICKKGGHRAKDCP--DKHKSGF----------------------------------- 246
+CFIC K GH A++CP D+ + +
Sbjct: 47 NCFICDKSGHWARECPESDEQQREYAPRTRGGFRGRGRGRGRGRGSYGGYGGYGGYGTRQ 106
Query: 247 QNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVP----GEVS 302
++A VC KCG GH C N + D ++ + D P
Sbjct: 107 RDADVCYKCGTPGHFARECPND-AADGIQRNE----------------DRRPMGRRNNDY 149
Query: 303 CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVRK 359
CFRCGQ GH C+ A R T + ++CYNC EGH AR+C + K
Sbjct: 150 CFRCGQPGHMAR---DCLSA-ENGRSRTGATNINTCYNCYKEGHLARDCPEDNACYK 202
>gi|77735399|ref|NP_001029396.1| cellular nucleic acid-binding protein [Bos taurus]
gi|157909784|ref|NP_001103216.1| cellular nucleic acid-binding protein isoform 3 [Mus musculus]
gi|187608750|ref|NP_001120668.1| cellular nucleic acid-binding protein isoform 6 [Homo sapiens]
gi|356582435|ref|NP_001239194.1| cellular nucleic acid-binding protein isoform 2 [Canis lupus
familiaris]
gi|332261807|ref|XP_003279958.1| PREDICTED: cellular nucleic acid-binding protein isoform 2
[Nomascus leucogenys]
gi|332817847|ref|XP_003310041.1| PREDICTED: uncharacterized protein LOC460682 isoform 2 [Pan
troglodytes]
gi|332817851|ref|XP_003310042.1| PREDICTED: uncharacterized protein LOC460682 isoform 3 [Pan
troglodytes]
gi|334342424|ref|XP_003341812.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 2
[Monodelphis domestica]
gi|338714526|ref|XP_003363100.1| PREDICTED: cellular nucleic acid-binding protein-like [Equus
caballus]
gi|348553987|ref|XP_003462807.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 2
[Cavia porcellus]
gi|354482849|ref|XP_003503608.1| PREDICTED: cellular nucleic acid-binding protein isoform 2
[Cricetulus griseus]
gi|390475371|ref|XP_003734945.1| PREDICTED: cellular nucleic acid-binding protein [Callithrix
jacchus]
gi|395516730|ref|XP_003762540.1| PREDICTED: cellular nucleic acid-binding protein isoform 2
[Sarcophilus harrisii]
gi|397518582|ref|XP_003829463.1| PREDICTED: cellular nucleic acid-binding protein isoform 2 [Pan
paniscus]
gi|402887089|ref|XP_003906937.1| PREDICTED: cellular nucleic acid-binding protein [Papio anubis]
gi|410037470|ref|XP_003950233.1| PREDICTED: uncharacterized protein LOC460682 [Pan troglodytes]
gi|410951816|ref|XP_003982589.1| PREDICTED: cellular nucleic acid-binding protein isoform 2 [Felis
catus]
gi|426342038|ref|XP_004036323.1| PREDICTED: cellular nucleic acid-binding protein isoform 2 [Gorilla
gorilla gorilla]
gi|426342046|ref|XP_004036327.1| PREDICTED: cellular nucleic acid-binding protein isoform 6 [Gorilla
gorilla gorilla]
gi|110832801|sp|Q3T0Q6.1|CNBP_BOVIN RecName: Full=Cellular nucleic acid-binding protein; Short=CNBP;
AltName: Full=Zinc finger protein 9
gi|2136380|pir||A55499 zinc finger protein 9 - human
gi|292348|gb|AAA89198.1| nucleic acid binding protein [Mus sp.]
gi|12653049|gb|AAH00288.1| CNBP protein [Homo sapiens]
gi|15928890|gb|AAH14911.1| CNBP protein [Homo sapiens]
gi|55730956|emb|CAH92196.1| hypothetical protein [Pongo abelii]
gi|74207292|dbj|BAE30832.1| unnamed protein product [Mus musculus]
gi|74226825|dbj|BAE27058.1| unnamed protein product [Mus musculus]
gi|74354088|gb|AAI02299.1| CCHC-type zinc finger, nucleic acid binding protein [Bos taurus]
gi|119599678|gb|EAW79272.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein), isoform CRA_b [Homo sapiens]
gi|119599681|gb|EAW79275.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein), isoform CRA_b [Homo sapiens]
gi|149036675|gb|EDL91293.1| cellular nucleic acid binding protein 1, isoform CRA_a [Rattus
norvegicus]
gi|296474617|tpg|DAA16732.1| TPA: cellular nucleic acid-binding protein [Bos taurus]
gi|380816310|gb|AFE80029.1| cellular nucleic acid-binding protein isoform 6 [Macaca mulatta]
gi|383421415|gb|AFH33921.1| cellular nucleic acid-binding protein isoform 6 [Macaca mulatta]
gi|384949298|gb|AFI38254.1| cellular nucleic acid-binding protein isoform 6 [Macaca mulatta]
gi|410221752|gb|JAA08095.1| CCHC-type zinc finger, nucleic acid binding protein [Pan
troglodytes]
gi|410253688|gb|JAA14811.1| CCHC-type zinc finger, nucleic acid binding protein [Pan
troglodytes]
gi|410293498|gb|JAA25349.1| CCHC-type zinc finger, nucleic acid binding protein [Pan
troglodytes]
Length = 170
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 78/189 (41%), Gaps = 48/189 (25%)
Query: 183 CYNCGEEGHMAVNCRSA----------------VKRKKP--CFVCGSLEHGVRQCSKAQD 224
C+ CG GH A C + V P C+ CG H + C +D
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 225 -CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICR 283
C+ C +GGH AKDC + + + Q C CG GH C D E +CY C
Sbjct: 66 ACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSCG 116
Query: 284 CFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGA 343
FGH+ D +V C+RCG+ GH ++ + + S +CY CG
Sbjct: 117 EFGHI----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCGE 156
Query: 344 EGHFARECV 352
GH AREC
Sbjct: 157 SGHLARECT 165
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KDC
Sbjct: 66 ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDC 125
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CG++GH +C + EV CY C GHL
Sbjct: 126 ---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 160
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 82 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 138
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 139 VAINCS-------KTSEVNCYRCGESGH 159
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 64/173 (36%), Gaps = 63/173 (36%)
Query: 222 AQDCFICKKGGHRAKDCPDKHKSG---------FQNAQ-----VCLKCGDSGHDMFSCRN 267
+ +CF C + GH A++CP G FQ +C +CG+SGH C
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC-- 60
Query: 268 SYSLDDLKEVQCYICRCFGHL-------------CCVNISDAVPGEVS----------CF 304
DL+E CY C GH+ CC N PG ++ C+
Sbjct: 61 -----DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGK--PGHLARDCDHADEQKCY 113
Query: 305 RCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKV 357
CG+ GH + + CY CG GH A C +S+V
Sbjct: 114 SCGEFGHI-----------------QKDCTKVKCYRCGETGHVAINCSKTSEV 149
>gi|54696092|gb|AAV38418.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein) [synthetic construct]
gi|61368826|gb|AAX43243.1| zinc finger protein 9 [synthetic construct]
Length = 171
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 78/189 (41%), Gaps = 48/189 (25%)
Query: 183 CYNCGEEGHMAVNCRSA----------------VKRKKP--CFVCGSLEHGVRQCSKAQD 224
C+ CG GH A C + V P C+ CG H + C +D
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 225 -CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICR 283
C+ C +GGH AKDC + + + Q C CG GH C D E +CY C
Sbjct: 66 ACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSCG 116
Query: 284 CFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGA 343
FGH+ D +V C+RCG+ GH ++ + + S +CY CG
Sbjct: 117 EFGHI----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCGE 156
Query: 344 EGHFARECV 352
GH AREC
Sbjct: 157 SGHLARECT 165
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KDC
Sbjct: 66 ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDC 125
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CG++GH +C + EV CY C GHL
Sbjct: 126 ---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 160
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 82 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 138
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 139 VAINCS-------KTSEVNCYRCGESGH 159
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 64/173 (36%), Gaps = 63/173 (36%)
Query: 222 AQDCFICKKGGHRAKDCPDKHKSG---------FQNAQ-----VCLKCGDSGHDMFSCRN 267
+ +CF C + GH A++CP G FQ +C +CG+SGH C
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC-- 60
Query: 268 SYSLDDLKEVQCYICRCFGHL-------------CCVNISDAVPGEVS----------CF 304
DL+E CY C GH+ CC N PG ++ C+
Sbjct: 61 -----DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGK--PGHLARDCDHADEQKCY 113
Query: 305 RCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKV 357
CG+ GH + + CY CG GH A C +S+V
Sbjct: 114 SCGEFGHI-----------------QKDCTKVKCYRCGETGHVAINCSKTSEV 149
>gi|345329901|ref|XP_003431440.1| PREDICTED: cellular nucleic acid-binding protein-like
[Ornithorhynchus anatinus]
Length = 170
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 78/189 (41%), Gaps = 48/189 (25%)
Query: 183 CYNCGEEGHMAVNCRSA----------------VKRKKP--CFVCGSLEHGVRQCSKAQD 224
C+ CG GH A C + V P C+ CG H + C +D
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGLRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 225 -CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICR 283
C+ C +GGH AKDC + + + Q C CG GH C D E +CY C
Sbjct: 66 ACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSCG 116
Query: 284 CFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGA 343
FGH+ D +V C+RCG+ GH ++ + + S +CY CG
Sbjct: 117 EFGHI----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCGE 156
Query: 344 EGHFARECV 352
GH AREC
Sbjct: 157 SGHLARECT 165
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KDC
Sbjct: 66 ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDC 125
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CG++GH +C + EV CY C GHL
Sbjct: 126 ---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 160
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 82 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 138
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 139 VAINCS-------KTSEVNCYRCGESGH 159
>gi|50471|emb|CAA45345.1| cellular nucleic acid binding protein clone 6 [Mus musculus]
gi|50473|emb|CAA77896.1| cellular nucleic acid binding protein clone 6 [Mus musculus]
Length = 170
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 78/189 (41%), Gaps = 48/189 (25%)
Query: 183 CYNCGEEGHMAVNCRSA----------------VKRKKP--CFVCGSLEHGVRQCSKAQD 224
C+ CG GH A C + V P C+ CG H + C +D
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 225 -CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICR 283
C+ C +GGH AKDC + + + Q C CG GH C D E +CY C
Sbjct: 66 ACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSCG 116
Query: 284 CFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGA 343
FGH+ D +V C+RCG+ GH ++ + + S +CY CG
Sbjct: 117 EFGHI----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCGE 156
Query: 344 EGHFARECV 352
GH AREC
Sbjct: 157 SGHLARECT 165
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KDC
Sbjct: 66 ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDC 125
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CG++GH +C + EV CY C GHL
Sbjct: 126 ---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 160
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 82 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 138
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 139 VAINCS-------KTSEVNCYRCGESGH 159
>gi|26347241|dbj|BAC37269.1| unnamed protein product [Mus musculus]
Length = 171
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 78/190 (41%), Gaps = 49/190 (25%)
Query: 183 CYNCGEEGHMAVNCRSA----------------VKRKKP--CFVCGSLEHGVRQCSKAQD 224
C+ CG GH A C + V P C+ CG H + C +D
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGEPGHLAKDCDLQED 65
Query: 225 --CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYIC 282
C+ C +GGH AKDC + + + Q C CG GH C D E +CY C
Sbjct: 66 EACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSC 116
Query: 283 RCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCG 342
FGH+ D +V C+RCG+ GH ++ + + S +CY CG
Sbjct: 117 GEFGHI----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCG 156
Query: 343 AEGHFARECV 352
GH AREC
Sbjct: 157 ESGHLARECT 166
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 54/111 (48%), Gaps = 18/111 (16%)
Query: 181 QTCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKD 237
+ CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KD
Sbjct: 66 EACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKD 125
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C C +CG++GH +C + EV CY C GHL
Sbjct: 126 C---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 161
>gi|157909782|ref|NP_001103215.1| cellular nucleic acid-binding protein isoform 2 [Mus musculus]
gi|187608744|ref|NP_001120667.1| cellular nucleic acid-binding protein isoform 5 [Homo sapiens]
gi|68359739|gb|AAY96754.1| cellular nucleic acid binding protein beta variant 1 [Homo sapiens]
gi|74142441|dbj|BAE31974.1| unnamed protein product [Mus musculus]
Length = 171
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 78/190 (41%), Gaps = 49/190 (25%)
Query: 183 CYNCGEEGHMAVNCRSA----------------VKRKKP--CFVCGSLEHGVRQCSKAQD 224
C+ CG GH A C + V P C+ CG H + C +D
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 225 --CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYIC 282
C+ C +GGH AKDC + + + Q C CG GH C D E +CY C
Sbjct: 66 EACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSC 116
Query: 283 RCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCG 342
FGH+ D +V C+RCG+ GH ++ + + S +CY CG
Sbjct: 117 GEFGHI----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCG 156
Query: 343 AEGHFARECV 352
GH AREC
Sbjct: 157 ESGHLARECT 166
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 54/111 (48%), Gaps = 18/111 (16%)
Query: 181 QTCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKD 237
+ CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KD
Sbjct: 66 EACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKD 125
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C C +CG++GH +C + EV CY C GHL
Sbjct: 126 C---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 161
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 83 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 139
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 140 VAINCS-------KTSEVNCYRCGESGH 160
>gi|356574489|ref|XP_003555379.1| PREDICTED: uncharacterized protein LOC100783153 [Glycine max]
Length = 1410
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 206 CFVCGSLEHGVRQCS------KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSG 259
CF+C +++H + C K + C C++ GHRAK+CP+ G ++A C CG++G
Sbjct: 72 CFICKAMDHIAKLCPEKAEWEKNKICLRCRRRGHRAKNCPEVL-DGAKDAMYCYNCGENG 130
Query: 260 HDMFSCRNSYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGHTG 313
H + C + K +C++C GHL C N P C CG + H
Sbjct: 131 HSLTQCPHPLQEGGTKFAECFVCNQRGHLSKNCPQNTHGIYPKGGCCKICGGVTHLA 187
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 34/75 (45%), Gaps = 12/75 (16%)
Query: 183 CYNCGEEGHMAVNCRSAVK----RKKPCFVCGSLEHGVRQCS--------KAQDCFICKK 230
CYNCGE GH C ++ + CFVC H + C K C IC
Sbjct: 123 CYNCGENGHSLTQCPHPLQEGGTKFAECFVCNQRGHLSKNCPQNTHGIYPKGGCCKICGG 182
Query: 231 GGHRAKDCPDKHKSG 245
H AKDCPDK KSG
Sbjct: 183 VTHLAKDCPDKGKSG 197
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 38/94 (40%), Gaps = 11/94 (11%)
Query: 183 CYNCGEEGHMAVNCRSAV---KRKKPCFVCGSLEHGVRQC--------SKAQDCFICKKG 231
C C GH A NC + K C+ CG H + QC +K +CF+C +
Sbjct: 97 CLRCRRRGHRAKNCPEVLDGAKDAMYCYNCGENGHSLTQCPHPLQEGGTKFAECFVCNQR 156
Query: 232 GHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
GH +K+CP + C CG H C
Sbjct: 157 GHLSKNCPQNTHGIYPKGGCCKICGGVTHLAKDC 190
>gi|320580572|gb|EFW94794.1| zinc finger protein, putative [Ogataea parapolymorpha DL-1]
Length = 390
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 176 PDRGWQTCYNCGEEGHMAVNCRSAVKRKK-PCFVCGSLEHGVRQC-SKAQDCFICKKGGH 233
P R CYNCG+ GH+A C +A K C CG L H R C S C+ C K GH
Sbjct: 294 PLRPVSKCYNCGKIGHLAKGCSAARGGPKVTCHKCGGLNHFARDCQSGVVKCYACGKTGH 353
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGH 260
+KDC NA+ C KCG+SGH
Sbjct: 354 ISKDCTSASGGSNFNAKTCYKCGESGH 380
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 70/176 (39%), Gaps = 27/176 (15%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
+TCY CG+ GH A C+ ++ C+ C H C + + C+ CK+ GH
Sbjct: 232 RTCYKCGQVGHFADACQET---ERLCYNCKQPGHESGDCPEPKQTTQKQCYNCKQTGHVQ 288
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISD 295
+C + + C CG GH C + +V C+ C H D
Sbjct: 289 SECSEP----LRPVSKCYNCGKIGHLAKGCS---AARGGPKVTCHKCGGLNHF----ARD 337
Query: 296 AVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
G V C+ CG+ GH C A S G A +CY CG GH ++ C
Sbjct: 338 CQSGVVKCYACGKTGHIS---KDCTSA---SGGSNFNA--KTCYKCGESGHISKFC 385
>gi|356534137|ref|XP_003535614.1| PREDICTED: uncharacterized protein LOC100804471 [Glycine max]
Length = 1241
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 206 CFVCGSLEHGVRQCS------KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSG 259
CF+C +++H + C K + C C++ GHRAK+CP+ G ++A+ C CG++G
Sbjct: 72 CFICKAMDHIAKLCPEKAEWEKNKICLRCRRRGHRAKNCPEVL-DGAKDAKYCYNCGENG 130
Query: 260 HDMFSCRNSYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGHTG 313
H + C + K +C++C GHL C N P C CG + H
Sbjct: 131 HALTQCLHPLQEGGTKFAECFVCNQRGHLSKNCPQNTHGIYPKGGCCKICGGVTHLA 187
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 34/75 (45%), Gaps = 12/75 (16%)
Query: 183 CYNCGEEGHMAVNCRSAVK----RKKPCFVCGSLEHGVRQCS--------KAQDCFICKK 230
CYNCGE GH C ++ + CFVC H + C K C IC
Sbjct: 123 CYNCGENGHALTQCLHPLQEGGTKFAECFVCNQRGHLSKNCPQNTHGIYPKGGCCKICGG 182
Query: 231 GGHRAKDCPDKHKSG 245
H AKDCPDK KSG
Sbjct: 183 VTHLAKDCPDKGKSG 197
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 11/96 (11%)
Query: 181 QTCYNCGEEGHMAVNCRSAV---KRKKPCFVCGSLEHGVRQC--------SKAQDCFICK 229
+ C C GH A NC + K K C+ CG H + QC +K +CF+C
Sbjct: 95 KICLRCRRRGHRAKNCPEVLDGAKDAKYCYNCGENGHALTQCLHPLQEGGTKFAECFVCN 154
Query: 230 KGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
+ GH +K+CP + C CG H C
Sbjct: 155 QRGHLSKNCPQNTHGIYPKGGCCKICGGVTHLAKDC 190
>gi|99907739|gb|ABF68760.1| CNBP mutant 36-163, partial [synthetic construct]
Length = 128
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 68/147 (46%), Gaps = 30/147 (20%)
Query: 206 CFVCGSLEHGVRQCSKAQD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFS 264
C+ CG H R C + +D C+ C + H ++DC + K + Q C CG +GH
Sbjct: 5 CYRCGEQGHIARDCEQTEDACYNCHRSXHISRDCKEPKK---EREQCCYNCGKAGHVARD 61
Query: 265 CRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACA 324
C D E +CY C FGH + +V C+RCG++GH +
Sbjct: 62 C------DHANEQKCYSCGGFGHF------QKLCDKVKCYRCGEIGHVAV---------- 99
Query: 325 RSRGETVEASPSSCYNCGAEGHFAREC 351
+ +A+ +CYNCG GH AR+C
Sbjct: 100 ----QCSKATEVNCYNCGKTGHLARDC 122
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 18/83 (21%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKR----------------KKPCFVCGSLEHGVR 217
+P Q CYNCG+ GH+A +C A ++ K C+ CG + H
Sbjct: 40 EPKKEREQCCYNCGKAGHVARDCDHANEQKCYSCGGFGHFQKLCDKVKCYRCGEIGHVAV 99
Query: 218 QCSKAQD--CFICKKGGHRAKDC 238
QCSKA + C+ C K GH A+DC
Sbjct: 100 QCSKATEVNCYNCGKTGHLARDC 122
>gi|45382487|ref|NP_990238.1| cellular nucleic acid-binding protein [Gallus gallus]
gi|6225175|sp|O42395.1|CNBP_CHICK RecName: Full=Cellular nucleic acid-binding protein; Short=CNBP;
AltName: Full=Zinc finger protein 9
gi|2232217|gb|AAB62243.1| cellular nucleic acid binding protein [Gallus gallus]
Length = 172
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 73/170 (42%), Gaps = 50/170 (29%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
CY CGE GH+A +C ++ K C+ CG +GGH AKDC +
Sbjct: 48 CYRCGESGHLAKDCD--LQEDKACYNCG-------------------RGGHIAKDCKEPK 86
Query: 243 KSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVS 302
+ + Q C CG GH C D E +CY C FGH+ D +V
Sbjct: 87 R---EREQCCYNCGKPGHLARDC------DHADEQKCYSCGEFGHI----QKDCT--KVK 131
Query: 303 CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECV 352
C+RCG+ GH ++ + + S +CY CG GH AREC
Sbjct: 132 CYRCGETGHVAINCS--------------KTSEVNCYRCGESGHLARECT 167
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 54/111 (48%), Gaps = 18/111 (16%)
Query: 181 QTCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKD 237
+ CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KD
Sbjct: 67 KACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKD 126
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C C +CG++GH +C + EV CY C GHL
Sbjct: 127 C---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 162
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 84 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 140
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 141 VAINCS-------KTSEVNCYRCGESGH 161
>gi|156065913|ref|XP_001598878.1| hypothetical protein SS1G_00967 [Sclerotinia sclerotiorum 1980]
gi|154691826|gb|EDN91564.1| hypothetical protein SS1G_00967 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 394
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 78/201 (38%), Gaps = 43/201 (21%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHG--VRQCSKAQDCFICKKGGHRAKDC 238
+ CY CG GH A C SA ++ C+ G +G + + ++A+ C+ C+ GH DC
Sbjct: 179 RACYKCGNVGHYAEVCASA---ERLCYNLGHESNGCPLPRTTEAKQCYHCQGLGHVQADC 235
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYS--------------------------LD 272
P SG C CG GH +C N +
Sbjct: 236 PTLRISGAGTTGRCYNCGMPGHLARACPNPNNGMPGAPRGLGAPRGGFGGGFAPRGGFAG 295
Query: 273 DLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVE 332
+ CY C H D V C+ CG++GHT + C+ G +
Sbjct: 296 GPRPATCYKCGGPNHF----ARDCQASAVKCYACGKIGHTS-------RDCSSPNGGVNK 344
Query: 333 ASPSSCYNCGAEGHFARECVS 353
A CY CG EGH AR+C S
Sbjct: 345 AG-KICYTCGTEGHVARDCPS 364
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 84/225 (37%), Gaps = 45/225 (20%)
Query: 154 TVEISDNIVLRKLLRGPRYFDPPDR------GWQTCYNCGEEGHMAVNCRS--------- 198
+ IS V + LR R +PP R W+T E+G V CR+
Sbjct: 117 VINISSTTV-EEWLRADRADEPPHRCRKIVEEWET-----EDGAF-VTCRADDGSQQTHK 169
Query: 199 ----AVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLK 254
+ ++ C+ CG++ H C+ A+ +C GH + CP + A+ C
Sbjct: 170 LVAMSSLSRRACYKCGNVGHYAEVCASAER--LCYNLGHESNGCPLPRTT---EAKQCYH 224
Query: 255 CGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVPGEVSCFRCGQLGHT 312
C GH C +CY C GHL C N ++ +PG
Sbjct: 225 CQGLGHVQADCPTLRISGAGTTGRCYNCGMPGHLARACPNPNNGMPGAPR---------- 274
Query: 313 GLHWNSCMQACARSRGETVEASP--SSCYNCGAEGHFARECVSSS 355
GL + P ++CY CG HFAR+C +S+
Sbjct: 275 GLGAPRGGFGGGFAPRGGFAGGPRPATCYKCGGPNHFARDCQASA 319
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 13/69 (18%)
Query: 182 TCYNCGEEGHMAVNCR-SAVKRKKPCFVCGSLEHGVRQCSK--------AQDCFICKKGG 232
TCY CG H A +C+ SAVK C+ CG + H R CS + C+ C G
Sbjct: 301 TCYKCGGPNHFARDCQASAVK----CYACGKIGHTSRDCSSPNGGVNKAGKICYTCGTEG 356
Query: 233 HRAKDCPDK 241
H A+DCP K
Sbjct: 357 HVARDCPSK 365
>gi|119599682|gb|EAW79276.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein), isoform CRA_d [Homo sapiens]
gi|383421413|gb|AFH33920.1| cellular nucleic acid-binding protein isoform 3 [Macaca mulatta]
Length = 171
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 78/190 (41%), Gaps = 49/190 (25%)
Query: 183 CYNCGEEGHMAVNCRSA-----------------VKRKKP--CFVCGSLEHGVRQCSKAQ 223
C+ CG GH A C + V P C+ CG H + C +
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFQFVSSSLPDICYRCGESGHLAKDCDLQE 65
Query: 224 D-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYIC 282
D C+ C +GGH AKDC + + + Q C CG GH C D E +CY C
Sbjct: 66 DACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSC 116
Query: 283 RCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCG 342
FGH+ D +V C+RCG+ GH ++ + + S +CY CG
Sbjct: 117 GEFGHI----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCG 156
Query: 343 AEGHFARECV 352
GH AREC
Sbjct: 157 ESGHLARECT 166
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KDC
Sbjct: 67 ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDC 126
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CG++GH +C + EV CY C GHL
Sbjct: 127 ---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 161
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 83 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 139
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 140 VAINCS-------KTSEVNCYRCGESGH 160
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 64/174 (36%), Gaps = 64/174 (36%)
Query: 222 AQDCFICKKGGHRAKDCPDKHKSG----------FQNAQ-----VCLKCGDSGHDMFSCR 266
+ +CF C + GH A++CP G FQ +C +CG+SGH C
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFQFVSSSLPDICYRCGESGHLAKDC- 61
Query: 267 NSYSLDDLKEVQCYICRCFGHL-------------CCVNISDAVPGEVS----------C 303
DL+E CY C GH+ CC N PG ++ C
Sbjct: 62 ------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGK--PGHLARDCDHADEQKC 113
Query: 304 FRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKV 357
+ CG+ GH + + CY CG GH A C +S+V
Sbjct: 114 YSCGEFGHI-----------------QKDCTKVKCYRCGETGHVAINCSKTSEV 150
>gi|407837810|gb|EKF99870.1| hypothetical protein TCSYLVIO_009208 [Trypanosoma cruzi]
Length = 503
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 62/145 (42%), Gaps = 31/145 (21%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C+ C + GHMA C + R CF CGS H + C CF C GHR+ DCP K
Sbjct: 92 CFQCHQRGHMAPTC--PLTR---CFNCGSYGHSAQLCYSRPLCFHCSLAGHRSTDCPMKP 146
Query: 243 KSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVS 302
K +VC +C + GH+M C + C++C GH A E
Sbjct: 147 K-----GRVCYRCKEPGHEMAECTQT--------ALCHMCNQAGHFI------AQCPEAV 187
Query: 303 CFRCGQLGHTGLHWNSCMQACARSR 327
C C + GHT AC +SR
Sbjct: 188 CNLCNERGHTS-------SACLKSR 205
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 59/161 (36%), Gaps = 32/161 (19%)
Query: 202 RKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQN----AQVCLKCGD 257
R C C + +H R C C C + GH +DCP + K VC CG
Sbjct: 17 RGLTCSNCSATDHLRRDCPLV-TCRSCGRLGHFKEDCPSEKKRARAEEDGEVSVCRSCGS 75
Query: 258 SGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWN 317
S H SC + V+C+ C GH+ + P CF CG GH+
Sbjct: 76 SRHVKASCPLRS-----QSVECFQCHQRGHM-----APTCP-LTRCFNCGSYGHSA---- 120
Query: 318 SCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVR 358
Q C S C++C GH + +C K R
Sbjct: 121 ---QLCY---------SRPLCFHCSLAGHRSTDCPMKPKGR 149
>gi|338714530|ref|XP_003363102.1| PREDICTED: cellular nucleic acid-binding protein-like [Equus
caballus]
Length = 172
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 78/191 (40%), Gaps = 50/191 (26%)
Query: 183 CYNCGEEGHMAVNCRSA----------------VKRKKP--CFVCGSLEHGVRQCSKAQD 224
C+ CG GH A C + V P C+ CG H + C +D
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 225 ---CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYI 281
C+ C +GGH AKDC + + + Q C CG GH C D E +CY
Sbjct: 66 GKSCYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYS 116
Query: 282 CRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNC 341
C FGH+ D +V C+RCG+ GH ++ + + S +CY C
Sbjct: 117 CGEFGHI----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRC 156
Query: 342 GAEGHFARECV 352
G GH AREC
Sbjct: 157 GESGHLARECT 167
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 18/111 (16%)
Query: 181 QTCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKD 237
++CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KD
Sbjct: 67 KSCYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKD 126
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C C +CG++GH +C + EV CY C GHL
Sbjct: 127 C---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 162
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 84 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 140
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 141 VAINCS-------KTSEVNCYRCGESGH 161
>gi|427787167|gb|JAA59035.1| Putative e3 ubiquitin ligase [Rhipicephalus pulchellus]
Length = 240
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 89/204 (43%), Gaps = 46/204 (22%)
Query: 173 FDPPDRGWQTCYNCGEEGHMAVNCRSAVKR-------------------KKPCFVCGSLE 213
+ PP R + CY C GH A +C+ A R + C+ CG +
Sbjct: 54 YKPPIR--EKCYKCNRIGHFARDCKEAEDRCYRCNGTGHISKDCQHGPDEMSCYNCGKMG 111
Query: 214 HGVRQCSKAQ-DCFICKKGGHRAKDCP-DKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSL 271
H R+C + + C+IC K GH ++DC D+ +SG + C CG GH C NS
Sbjct: 112 HIARECKEQEKTCYICHKQGHISRDCEQDERRSGAGLSLQCYLCGKLGHISRDCPNS-ER 170
Query: 272 DDLKEVQCYICRCFGHLC--CVNI--SDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSR 327
DD K CY C GH+ C +DAV C+RC + GH + S
Sbjct: 171 DDRK---CYNCGHLGHISRDCPEAGGNDAVAD--VCYRCNERGHIARNCRS--------- 216
Query: 328 GETVEASPSSCYNCGAEGHFAREC 351
+ + CY+CG GH AREC
Sbjct: 217 ----TRANNRCYHCGEVGHLAREC 236
>gi|187608738|ref|NP_001120666.1| cellular nucleic acid-binding protein isoform 4 [Homo sapiens]
gi|291393356|ref|XP_002713210.1| PREDICTED: zinc finger protein 9 isoform 2 [Oryctolagus cuniculus]
gi|68359783|gb|AAY96755.1| cellular nucleic acid binding protein beta variant 2 [Homo sapiens]
Length = 172
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 78/191 (40%), Gaps = 50/191 (26%)
Query: 183 CYNCGEEGHMAVNCRSA----------------VKRKKP--CFVCGSLEHGVRQCSKAQD 224
C+ CG GH A C + V P C+ CG H + C +D
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 225 ---CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYI 281
C+ C +GGH AKDC + + + Q C CG GH C D E +CY
Sbjct: 66 VEACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYS 116
Query: 282 CRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNC 341
C FGH+ D +V C+RCG+ GH ++ + + S +CY C
Sbjct: 117 CGEFGHI----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRC 156
Query: 342 GAEGHFARECV 352
G GH AREC
Sbjct: 157 GESGHLARECT 167
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 54/111 (48%), Gaps = 18/111 (16%)
Query: 181 QTCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKD 237
+ CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KD
Sbjct: 67 EACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKD 126
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C C +CG++GH +C + EV CY C GHL
Sbjct: 127 C---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 162
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 84 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 140
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 141 VAINCS-------KTSEVNCYRCGESGH 161
>gi|335772494|gb|AEH58085.1| cellular nucleic acid-binding protein-like protein, partial [Equus
caballus]
Length = 166
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 78/189 (41%), Gaps = 48/189 (25%)
Query: 183 CYNCGEEGHMAVNCRSA----------------VKRKKP--CFVCGSLEHGVRQCSKAQD 224
C+ CG GH A C + V P C+ CG H + C +D
Sbjct: 2 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 61
Query: 225 -CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICR 283
C+ C +GGH AKDC + + + Q C CG GH C D E +CY C
Sbjct: 62 ACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSCG 112
Query: 284 CFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGA 343
FGH+ D +V C+RCG+ GH ++ + + S +CY CG
Sbjct: 113 EFGHI----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCGE 152
Query: 344 EGHFARECV 352
GH AREC
Sbjct: 153 SGHLARECT 161
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KDC
Sbjct: 62 ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDC 121
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CG++GH +C + EV CY C GHL
Sbjct: 122 ---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 156
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 78 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 134
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 135 VAINCS-------KTSEVNCYRCGESGH 155
>gi|318087050|gb|ADV40117.1| putative E3 ubiquitin ligase [Latrodectus hesperus]
Length = 175
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 18/138 (13%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA--------QDCFICKKGGH 233
+CYNCG GH A CR + K C+ CG H R C++ C+ C K GH
Sbjct: 41 SCYNCGRSGHFARECRES---DKTCYSCGKSGHISRDCTQGGGGGSDRKMTCYTCGKPGH 97
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNI 293
++DCP++ ++ + C CGD+GH C + D + CY C GH+ N
Sbjct: 98 ASRDCPNE-----RDDRKCYSCGDTGHISRDCPEGGNAGDNDDTVCYRCNESGHI-ARNC 151
Query: 294 SDAVPGEVSCFRCGQLGH 311
++ P C+ CG++GH
Sbjct: 152 RNSRPSN-KCYSCGEVGH 168
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 12/115 (10%)
Query: 181 QTCYNCGEEGHMAVNCR----SAVKRKKPCFVCGSLEHGVRQCSKAQD---CFICKKGGH 233
+TCY+CG+ GH++ +C RK C+ CG H R C +D C+ C GH
Sbjct: 60 KTCYSCGKSGHISRDCTQGGGGGSDRKMTCYTCGKPGHASRDCPNERDDRKCYSCGDTGH 119
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
++DCP+ +G + VC +C +SGH +CRNS + +CY C GH+
Sbjct: 120 ISRDCPEGGNAGDNDDTVCYRCNESGHIARNCRNSRPSN-----KCYSCGEVGHI 169
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 55/142 (38%), Gaps = 32/142 (22%)
Query: 222 AQDCFICKKGGHRAKDCPDKHKSGFQNAQV---------CLKCGDSGHDMFSCRNSYSLD 272
+ +C+ C K GH A+DCP + C CG SGH CR S
Sbjct: 3 SNECYKCHKSGHFARDCPSGDGGRGGGYRGDSRSSSRASCYNCGRSGHFARECRES---- 58
Query: 273 DLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGE 329
+ CY C GH+ C +++C+ CG+ GH SR
Sbjct: 59 ---DKTCYSCGKSGHISRDCTQGGGGGSDRKMTCYTCGKPGHA-------------SRDC 102
Query: 330 TVEASPSSCYNCGAEGHFAREC 351
E CY+CG GH +R+C
Sbjct: 103 PNERDDRKCYSCGDTGHISRDC 124
>gi|89269563|emb|CAJ82604.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein) [Xenopus (Silurana) tropicalis]
gi|115292111|gb|AAI22021.1| cnbp protein [Xenopus (Silurana) tropicalis]
Length = 177
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 67/148 (45%), Gaps = 30/148 (20%)
Query: 206 CFVCGSLEHGVRQCSKAQD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFS 264
C+ CG H + C +D C+ C +GGH AKDC + K + Q C CG GH
Sbjct: 54 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPRK---EREQCCYNCGKPGHLARD 110
Query: 265 CRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACA 324
C D E +CY C FGH+ D +V C+RCG+ GH ++ +
Sbjct: 111 C------DHADEQKCYSCGEFGHI----QKDCT--KVKCYRCGETGHVAINCS------- 151
Query: 325 RSRGETVEASPSSCYNCGAEGHFARECV 352
+ S +CY CG GH AREC
Sbjct: 152 -------KTSEVNCYRCGESGHLARECT 172
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG GH+A +C+ K R++ C+ CG H R C A Q C+ C + GH KDC
Sbjct: 73 ACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDC 132
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CG++GH +C + EV CY C GHL
Sbjct: 133 ---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 167
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 89 EPRKEREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 145
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 146 VAINCS-------KTSEVNCYRCGESGH 166
>gi|402910570|ref|XP_003917942.1| PREDICTED: zinc finger CCHC domain-containing protein 13-like
[Papio anubis]
Length = 170
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 75/174 (43%), Gaps = 51/174 (29%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
TCY CGE GH A NC + G++ C+ C + GH AKDC +
Sbjct: 46 TCYRCGEFGHHAKNC----------VLLGNI------------CYNCGRSGHIAKDCKEP 83
Query: 242 HKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEV 301
+ + Q C CG GH + C D KE +CY C GH+ +V
Sbjct: 84 KR---ERNQHCYTCGRLGHLAYDC------DRQKEQKCYSCGKLGHI------QKDCAQV 128
Query: 302 SCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSS 355
C+RCG+ GH ++ + +AS +CY CG GH AREC S +
Sbjct: 129 KCYRCGETGHVAINCS--------------KASQVNCYRCGESGHLARECPSEA 168
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CY CG GH+A +C ++++ C+ CG L H + C++ + C+ C + GH
Sbjct: 82 EPKRERNQHCYTCGRLGHLAYDCDR--QKEQKCYSCGKLGHIQKDCAQVK-CYRCGETGH 138
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + +QV C +CG+SGH
Sbjct: 139 VAINCS-------KASQVNCYRCGESGH 159
>gi|392343296|ref|XP_003754844.1| PREDICTED: cellular nucleic acid-binding protein-like [Rattus
norvegicus]
gi|392355786|ref|XP_003752133.1| PREDICTED: cellular nucleic acid-binding protein-like [Rattus
norvegicus]
gi|149055591|gb|EDM07175.1| rCG38105 [Rattus norvegicus]
Length = 170
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 79/190 (41%), Gaps = 48/190 (25%)
Query: 181 QTCYNCGEEGHMAVNCR------------------SAVKRKKPCFVCGSLEHGVRQCSKA 222
++C+ CG GH A C S+ + C+ CG H + C
Sbjct: 4 KSCFKCGRSGHWARECPKGGTRGRTTRGRTRGPQCSSASQSDVCYRCGETGHYAKDCDLL 63
Query: 223 QD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYI 281
QD C+ C + GH AKDC + + Q C C GH C D +E +CY
Sbjct: 64 QDTCYNCGRRGHIAKDCTQAKR---EREQCCYICSRPGHLARDC------DRQEEQKCYT 114
Query: 282 CRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNC 341
C FGH+ D ++ C+RCG+ GH ++ + +AS SCY C
Sbjct: 115 CGEFGHI----QKDCT--QIKCYRCGENGHMAVNCS--------------KASEVSCYRC 154
Query: 342 GAEGHFAREC 351
G GH AREC
Sbjct: 155 GESGHLAREC 164
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 7/61 (11%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD--CFICKKGGHRAKDC 238
Q CY CGE GH+ +C + +K C+ CG H CSKA + C+ C + GH A++C
Sbjct: 110 QKCYTCGEFGHIQKDC-TQIK----CYRCGENGHMAVNCSKASEVSCYRCGESGHLAREC 164
Query: 239 P 239
P
Sbjct: 165 P 165
>gi|4827071|ref|NP_003409.1| cellular nucleic acid-binding protein isoform 3 [Homo sapiens]
gi|12018264|ref|NP_072120.1| cellular nucleic acid-binding protein [Rattus norvegicus]
gi|197099834|ref|NP_001126703.1| cellular nucleic acid-binding protein [Pongo abelii]
gi|356582433|ref|NP_001239193.1| cellular nucleic acid-binding protein isoform 1 [Canis lupus
familiaris]
gi|301764545|ref|XP_002917687.1| PREDICTED: cellular nucleic acid-binding protein-like [Ailuropoda
melanoleuca]
gi|332261811|ref|XP_003279960.1| PREDICTED: cellular nucleic acid-binding protein isoform 4
[Nomascus leucogenys]
gi|332817849|ref|XP_516737.3| PREDICTED: uncharacterized protein LOC460682 isoform 4 [Pan
troglodytes]
gi|338714528|ref|XP_003363101.1| PREDICTED: cellular nucleic acid-binding protein-like [Equus
caballus]
gi|344275961|ref|XP_003409779.1| PREDICTED: cellular nucleic acid-binding protein-like [Loxodonta
africana]
gi|348553985|ref|XP_003462806.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 1
[Cavia porcellus]
gi|354482847|ref|XP_003503607.1| PREDICTED: cellular nucleic acid-binding protein isoform 1
[Cricetulus griseus]
gi|390475369|ref|XP_002758716.2| PREDICTED: cellular nucleic acid-binding protein isoform 1
[Callithrix jacchus]
gi|397518580|ref|XP_003829462.1| PREDICTED: cellular nucleic acid-binding protein isoform 1 [Pan
paniscus]
gi|402887087|ref|XP_003906936.1| PREDICTED: cellular nucleic acid-binding protein [Papio anubis]
gi|403268271|ref|XP_003926201.1| PREDICTED: cellular nucleic acid-binding protein [Saimiri
boliviensis boliviensis]
gi|410037468|ref|XP_003950232.1| PREDICTED: uncharacterized protein LOC460682 [Pan troglodytes]
gi|410037472|ref|XP_003950234.1| PREDICTED: uncharacterized protein LOC460682 [Pan troglodytes]
gi|410037479|ref|XP_003950237.1| PREDICTED: uncharacterized protein LOC460682 [Pan troglodytes]
gi|410951814|ref|XP_003982588.1| PREDICTED: cellular nucleic acid-binding protein isoform 1 [Felis
catus]
gi|426342036|ref|XP_004036322.1| PREDICTED: cellular nucleic acid-binding protein isoform 1 [Gorilla
gorilla gorilla]
gi|426342040|ref|XP_004036324.1| PREDICTED: cellular nucleic acid-binding protein isoform 3 [Gorilla
gorilla gorilla]
gi|426342042|ref|XP_004036325.1| PREDICTED: cellular nucleic acid-binding protein isoform 4 [Gorilla
gorilla gorilla]
gi|426342044|ref|XP_004036326.1| PREDICTED: cellular nucleic acid-binding protein isoform 5 [Gorilla
gorilla gorilla]
gi|441665181|ref|XP_004091798.1| PREDICTED: cellular nucleic acid-binding protein [Nomascus
leucogenys]
gi|441665186|ref|XP_004091799.1| PREDICTED: cellular nucleic acid-binding protein [Nomascus
leucogenys]
gi|50401851|sp|P62634.1|CNBP_RAT RecName: Full=Cellular nucleic acid-binding protein; Short=CNBP;
AltName: Full=Zinc finger protein 9
gi|50401852|sp|P62633.1|CNBP_HUMAN RecName: Full=Cellular nucleic acid-binding protein; Short=CNBP;
AltName: Full=Zinc finger protein 9
gi|75054771|sp|Q5R5R5.1|CNBP_PONAB RecName: Full=Cellular nucleic acid-binding protein; Short=CNBP;
AltName: Full=Zinc finger protein 9
gi|8650478|gb|AAF78224.1|AF242550_1 cellular nucleic acid binding protein [Rattus norvegicus]
gi|643576|gb|AAA61975.1| SRE-binding protein [Homo sapiens]
gi|790571|gb|AAA91782.1| nucleic acid binding protein [Homo sapiens]
gi|809511|dbj|BAA08212.1| Cellular Nucleic Acid Binding Protein [Rattus norvegicus]
gi|26344578|dbj|BAC35938.1| unnamed protein product [Mus musculus]
gi|38328236|gb|AAH62225.1| CCHC-type zinc finger, nucleic acid binding protein [Rattus
norvegicus]
gi|40738013|gb|AAR89462.1| zinc finger protein 9 [Homo sapiens]
gi|40738017|gb|AAR89464.1| cellular nucleic acid binding protein [Rattus norvegicus]
gi|55732400|emb|CAH92901.1| hypothetical protein [Pongo abelii]
gi|62205335|gb|AAH93058.1| CCHC-type zinc finger, nucleic acid binding protein [Homo sapiens]
gi|67970964|dbj|BAE01824.1| unnamed protein product [Macaca fascicularis]
gi|71891589|dbj|BAE16993.1| cellular nucleic acid binding protein [Rattus norvegicus]
gi|71891591|dbj|BAE16994.1| cellular nucleic acid binding protein [Rattus norvegicus]
gi|74144600|dbj|BAE27288.1| unnamed protein product [Mus musculus]
gi|74191437|dbj|BAE30298.1| unnamed protein product [Mus musculus]
gi|74195828|dbj|BAE30476.1| unnamed protein product [Mus musculus]
gi|74211374|dbj|BAE26440.1| unnamed protein product [Mus musculus]
gi|74226682|dbj|BAE26992.1| unnamed protein product [Mus musculus]
gi|74226907|dbj|BAE27097.1| unnamed protein product [Mus musculus]
gi|74226950|dbj|BAE27117.1| unnamed protein product [Mus musculus]
gi|90084990|dbj|BAE91236.1| unnamed protein product [Macaca fascicularis]
gi|119599679|gb|EAW79273.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein), isoform CRA_c [Homo sapiens]
gi|119599683|gb|EAW79277.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein), isoform CRA_c [Homo sapiens]
gi|148666812|gb|EDK99228.1| cellular nucleic acid binding protein, isoform CRA_a [Mus musculus]
gi|149036676|gb|EDL91294.1| cellular nucleic acid binding protein 1, isoform CRA_b [Rattus
norvegicus]
gi|189067296|dbj|BAG37006.1| unnamed protein product [Homo sapiens]
gi|208965940|dbj|BAG72984.1| CCHC-type zinc finger, nucleic acid binding protein [synthetic
construct]
gi|281347013|gb|EFB22597.1| hypothetical protein PANDA_006035 [Ailuropoda melanoleuca]
gi|344253372|gb|EGW09476.1| Cellular nucleic acid-binding protein [Cricetulus griseus]
gi|351695335|gb|EHA98253.1| Cellular nucleic acid-binding protein [Heterocephalus glaber]
gi|387543018|gb|AFJ72136.1| cellular nucleic acid-binding protein isoform 3 [Macaca mulatta]
gi|410253690|gb|JAA14812.1| CCHC-type zinc finger, nucleic acid binding protein [Pan
troglodytes]
gi|440895043|gb|ELR47334.1| Cellular nucleic acid-binding protein [Bos grunniens mutus]
gi|444512840|gb|ELV10182.1| Cellular nucleic acid-binding protein [Tupaia chinensis]
Length = 177
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 75/184 (40%), Gaps = 59/184 (32%)
Query: 177 DRGWQ--------TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFIC 228
DRG+Q CY CGE GH+A +C + C+ C
Sbjct: 40 DRGFQFVSSSLPDICYRCGESGHLAKDCDL----------------------QEDACYNC 77
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
+GGH AKDC + + + Q C CG GH C D E +CY C FGH+
Sbjct: 78 GRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSCGEFGHI 128
Query: 289 CCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFA 348
D +V C+RCG+ GH ++ + + S +CY CG GH A
Sbjct: 129 ----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCGESGHLA 168
Query: 349 RECV 352
REC
Sbjct: 169 RECT 172
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 89 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 145
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 146 VAINCS-------KTSEVNCYRCGESGH 166
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 64/180 (35%), Gaps = 70/180 (38%)
Query: 222 AQDCFICKKGGHRAKDCPDKHKS----------------GFQNAQ-----VCLKCGDSGH 260
+ +CF C + GH A++CP GFQ +C +CG+SGH
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGH 62
Query: 261 DMFSCRNSYSLDDLKEVQCYICRCFGHL-------------CCVNISDAVPGEVS----- 302
C DL+E CY C GH+ CC N PG ++
Sbjct: 63 LAKDC-------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGK--PGHLARDCDH 113
Query: 303 -----CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKV 357
C+ CG+ GH + + CY CG GH A C +S+V
Sbjct: 114 ADEQKCYSCGEFGHI-----------------QKDCTKVKCYRCGETGHVAINCSKTSEV 156
>gi|410293500|gb|JAA25350.1| CCHC-type zinc finger, nucleic acid binding protein [Pan
troglodytes]
Length = 176
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 75/184 (40%), Gaps = 59/184 (32%)
Query: 177 DRGWQ--------TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFIC 228
DRG+Q CY CGE GH+A +C + C+ C
Sbjct: 39 DRGFQFVSSSLPDICYRCGESGHLAKDCDL----------------------QEDACYNC 76
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
+GGH AKDC + + + Q C CG GH C D E +CY C FGH+
Sbjct: 77 GRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSCGEFGHI 127
Query: 289 CCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFA 348
D +V C+RCG+ GH ++ + + S +CY CG GH A
Sbjct: 128 ----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCGESGHLA 167
Query: 349 RECV 352
REC
Sbjct: 168 RECT 171
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 88 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 144
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 145 VAINCS-------KTSEVNCYRCGESGH 165
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 64/179 (35%), Gaps = 69/179 (38%)
Query: 222 AQDCFICKKGGHRAKDCPDKHKS---------------GFQNAQ-----VCLKCGDSGHD 261
+ +CF C + GH A++CP GFQ +C +CG+SGH
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHL 62
Query: 262 MFSCRNSYSLDDLKEVQCYICRCFGHL-------------CCVNISDAVPGEVS------ 302
C DL+E CY C GH+ CC N PG ++
Sbjct: 63 AKDC-------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGK--PGHLARDCDHA 113
Query: 303 ----CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKV 357
C+ CG+ GH + + CY CG GH A C +S+V
Sbjct: 114 DEQKCYSCGEFGHI-----------------QKDCTKVKCYRCGETGHVAINCSKTSEV 155
>gi|383421411|gb|AFH33919.1| cellular nucleic acid-binding protein isoform 3 [Macaca mulatta]
gi|410221754|gb|JAA08096.1| CCHC-type zinc finger, nucleic acid binding protein [Pan
troglodytes]
Length = 176
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 75/184 (40%), Gaps = 59/184 (32%)
Query: 177 DRGWQ--------TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFIC 228
DRG+Q CY CGE GH+A +C + C+ C
Sbjct: 39 DRGFQFVSSSLPDICYRCGESGHLAKDCDL----------------------QEDACYNC 76
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
+GGH AKDC + + + Q C CG GH C D E +CY C FGH+
Sbjct: 77 GRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSCGEFGHI 127
Query: 289 CCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFA 348
D +V C+RCG+ GH ++ + + S +CY CG GH A
Sbjct: 128 ----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCGESGHLA 167
Query: 349 RECV 352
REC
Sbjct: 168 RECT 171
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 88 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 144
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 145 VAINCS-------KTSEVNCYRCGESGH 165
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 64/179 (35%), Gaps = 69/179 (38%)
Query: 222 AQDCFICKKGGHRAKDCPDKHKS---------------GFQNAQ-----VCLKCGDSGHD 261
+ +CF C + GH A++CP GFQ +C +CG+SGH
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFTSDRGFQFVSSSLPDICYRCGESGHL 62
Query: 262 MFSCRNSYSLDDLKEVQCYICRCFGHL-------------CCVNISDAVPGEVS------ 302
C DL+E CY C GH+ CC N PG ++
Sbjct: 63 AKDC-------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGK--PGHLARDCDHA 113
Query: 303 ----CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKV 357
C+ CG+ GH + + CY CG GH A C +S+V
Sbjct: 114 DEQKCYSCGEFGHI-----------------QKDCTKVKCYRCGETGHVAINCSKTSEV 155
>gi|327265859|ref|XP_003217725.1| PREDICTED: cellular nucleic acid-binding protein-like [Anolis
carolinensis]
Length = 170
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 79/189 (41%), Gaps = 48/189 (25%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP------------------CFVCGSLEHGVRQCSKAQD 224
C+ CG GH A C + + R + C+ CG H + C +D
Sbjct: 6 CFKCGRTGHWARECPTGMGRGRGMRSRGRGFQFMSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 225 -CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICR 283
C+ C +GGH AKDC + + + Q C CG GH C D E +CY C
Sbjct: 66 ACYNCGRGGHIAKDCKEPRR---EREQCCYNCGKPGHLARDC------DHADEQKCYSCG 116
Query: 284 CFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGA 343
FGH+ D +V C+RCG+ GH ++ + + S +CY CG
Sbjct: 117 EFGHI----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCGE 156
Query: 344 EGHFARECV 352
GH AREC
Sbjct: 157 SGHLARECT 165
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KDC
Sbjct: 66 ACYNCGRGGHIAKDCKEPRREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDC 125
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CG++GH +C + EV CY C GHL
Sbjct: 126 ---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 160
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 11/81 (13%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH A +C
Sbjct: 89 QCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCS- 144
Query: 241 KHKSGFQNAQV-CLKCGDSGH 260
+ ++V C +CG+SGH
Sbjct: 145 ------KTSEVNCYRCGESGH 159
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 64/173 (36%), Gaps = 63/173 (36%)
Query: 222 AQDCFICKKGGHRAKDCPDKHKSG---------FQNAQ-----VCLKCGDSGHDMFSCRN 267
+ +CF C + GH A++CP G FQ +C +CG+SGH C
Sbjct: 3 SNECFKCGRTGHWARECPTGMGRGRGMRSRGRGFQFMSSSLPDICYRCGESGHLAKDC-- 60
Query: 268 SYSLDDLKEVQCYICRCFGHL-------------CCVNISDAVPGEVS----------CF 304
DL+E CY C GH+ CC N PG ++ C+
Sbjct: 61 -----DLQEDACYNCGRGGHIAKDCKEPRREREQCCYNCGK--PGHLARDCDHADEQKCY 113
Query: 305 RCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKV 357
CG+ GH + + CY CG GH A C +S+V
Sbjct: 114 SCGEFGHI-----------------QKDCTKVKCYRCGETGHVAINCSKTSEV 149
>gi|431913718|gb|ELK15208.1| Cellular nucleic acid-binding protein [Pteropus alecto]
Length = 189
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 77/184 (41%), Gaps = 59/184 (32%)
Query: 177 DRGWQ--------TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFIC 228
DRG+Q CY CGE GH+A +C + C+ C
Sbjct: 52 DRGFQFVSSSLPDICYRCGESGHLAKDCDL----------------------QEDACYNC 89
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
+GGH AKDC + + + Q C CG GH C D E +CY C FGH+
Sbjct: 90 GRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSCGEFGHI 140
Query: 289 CCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFA 348
D +V C+RCG+ GH ++ C+++ S +CY CG GH A
Sbjct: 141 ----QKDCT--KVKCYRCGETGHVAIN-------CSKT-------SEVNCYRCGESGHLA 180
Query: 349 RECV 352
REC
Sbjct: 181 RECT 184
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 64/180 (35%), Gaps = 70/180 (38%)
Query: 222 AQDCFICKKGGHRAKDCPDKHKS----------------GFQNAQ-----VCLKCGDSGH 260
+ +CF C + GH A++CP GFQ +C +CG+SGH
Sbjct: 15 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGH 74
Query: 261 DMFSCRNSYSLDDLKEVQCYICRCFGHL-------------CCVNISDAVPGEVS----- 302
C DL+E CY C GH+ CC N PG ++
Sbjct: 75 LAKDC-------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGK--PGHLARDCDH 125
Query: 303 -----CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKV 357
C+ CG+ GH + + CY CG GH A C +S+V
Sbjct: 126 ADEQKCYSCGEFGHI-----------------QKDCTKVKCYRCGETGHVAINCSKTSEV 168
>gi|19114592|ref|NP_593680.1| zinc finger protein Byr3 [Schizosaccharomyces pombe 972h-]
gi|543908|sp|P36627.1|BYR3_SCHPO RecName: Full=Cellular nucleic acid-binding protein homolog
gi|254734|gb|AAB23116.1| human cellular nucleic acid binding protein (CNBP) homolog
[Schizosaccharomyces pombe]
gi|1204164|emb|CAA93542.1| zinc finger protein Byr3 [Schizosaccharomyces pombe]
Length = 179
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 75/180 (41%), Gaps = 33/180 (18%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD---CFICKKGGHRAKDCP 239
CYNCGE GH A C + C+ C H +C++ Q C+ C GH +DCP
Sbjct: 19 CYNCGENGHQAREC----TKGSICYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRDCP 74
Query: 240 DKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLK------EVQCYICRCFGHLCCVNI 293
+ Q A+ C KCG GH CR + + + CY C +GH
Sbjct: 75 SS-PNPRQGAE-CYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGH----QA 128
Query: 294 SDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVS 353
D G V C+ CG++GH C QA S G+ CY C GH A C S
Sbjct: 129 RDCTMG-VKCYSCGKIGHRSF---ECQQA---SDGQL-------CYKCNQPGHIAVNCTS 174
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 15/102 (14%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRS----------AVKRKKPCFVCGSLEHGVRQCSKAQ 223
P R CY CG GH+A +CR+ + C+ CGS H R C+
Sbjct: 76 SPNPRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCTMGV 135
Query: 224 DCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
C+ C K GHR+ +C + Q+C KC GH +C
Sbjct: 136 KCYSCGKIGHRSFECQQA-----SDGQLCYKCNQPGHIAVNC 172
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 62/158 (39%), Gaps = 45/158 (28%)
Query: 206 CFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
C+ CG H R+C+K C+ C + GH+A +C + Q + C CG +GH + C
Sbjct: 19 CYNCGENGHQARECTKGSICYNCNQTGHKASECTEP-----QQEKTCYACGTAGHLVRDC 73
Query: 266 RNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACAR 325
+S + E C++CG++GH R
Sbjct: 74 PSSPNPRQGAE--------------------------CYKCGRVGHIARD--------CR 99
Query: 326 SRGETVEA------SPSSCYNCGAEGHFARECVSSSKV 357
+ G+ S +CY CG+ GH AR+C K
Sbjct: 100 TNGQQSGGRFGGHRSNMNCYACGSYGHQARDCTMGVKC 137
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 56/133 (42%), Gaps = 30/133 (22%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKK--PCFVCGSLEHGVRQC--------------SKAQD 224
+TCY CG GH+ +C S+ ++ C+ CG + H R C +
Sbjct: 58 KTCYACGTAGHLVRDCPSSPNPRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMN 117
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
C+ C GH+A+DC K C CG GH F C+ + S L CY C
Sbjct: 118 CYACGSYGHQARDCTMGVK--------CYSCGKIGHRSFECQQA-SDGQL----CYKCNQ 164
Query: 285 FGHLCCVNISDAV 297
GH+ VN + V
Sbjct: 165 PGHI-AVNCTSPV 176
>gi|54696090|gb|AAV38417.1| zinc finger protein 9 (a cellular retroviral nucleic acid binding
protein) [synthetic construct]
gi|61368820|gb|AAX43242.1| zinc finger protein 9 [synthetic construct]
Length = 178
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 75/184 (40%), Gaps = 59/184 (32%)
Query: 177 DRGWQ--------TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFIC 228
DRG+Q CY CGE GH+A +C + C+ C
Sbjct: 40 DRGFQFVSSSLPDICYRCGESGHLAKDCDL----------------------QEDACYNC 77
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
+GGH AKDC + + + Q C CG GH C D E +CY C FGH+
Sbjct: 78 GRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSCGEFGHI 128
Query: 289 CCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFA 348
D +V C+RCG+ GH ++ + + S +CY CG GH A
Sbjct: 129 ----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCGESGHLA 168
Query: 349 RECV 352
REC
Sbjct: 169 RECT 172
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 89 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 145
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 146 VAINCS-------KTSEVNCYRCGESGH 166
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 64/180 (35%), Gaps = 70/180 (38%)
Query: 222 AQDCFICKKGGHRAKDCPDKHKS----------------GFQNAQ-----VCLKCGDSGH 260
+ +CF C + GH A++CP GFQ +C +CG+SGH
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGH 62
Query: 261 DMFSCRNSYSLDDLKEVQCYICRCFGHL-------------CCVNISDAVPGEVS----- 302
C DL+E CY C GH+ CC N PG ++
Sbjct: 63 LAKDC-------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGK--PGHLARDCDH 113
Query: 303 -----CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKV 357
C+ CG+ GH + + CY CG GH A C +S+V
Sbjct: 114 ADEQKCYSCGEFGHI-----------------QKDCTKVKCYRCGETGHVAINCSKTSEV 156
>gi|449473367|ref|XP_002187556.2| PREDICTED: cellular nucleic acid-binding protein isoform 1
[Taeniopygia guttata]
Length = 170
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 79/189 (41%), Gaps = 48/189 (25%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP------------------CFVCGSLEHGVRQCSKAQD 224
C+ CG GH A C + + R + C+ CG H + C +D
Sbjct: 6 CFKCGRTGHWARECPTGMGRGRGMRSRGRGFQFMSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 225 -CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICR 283
C+ C +GGH AKDC + + + Q C CG GH C D E +CY C
Sbjct: 66 ACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSCG 116
Query: 284 CFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGA 343
FGH+ D +V C+RCG+ GH ++ + + S +CY CG
Sbjct: 117 EFGHI----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCGE 156
Query: 344 EGHFARECV 352
GH AREC
Sbjct: 157 SGHLARECT 165
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KDC
Sbjct: 66 ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDC 125
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CG++GH +C + EV CY C GHL
Sbjct: 126 ---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 160
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 82 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 138
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 139 VAINCS-------KTSEVNCYRCGESGH 159
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 64/173 (36%), Gaps = 63/173 (36%)
Query: 222 AQDCFICKKGGHRAKDCPDKHKSG---------FQNAQ-----VCLKCGDSGHDMFSCRN 267
+ +CF C + GH A++CP G FQ +C +CG+SGH C
Sbjct: 3 SNECFKCGRTGHWARECPTGMGRGRGMRSRGRGFQFMSSSLPDICYRCGESGHLAKDC-- 60
Query: 268 SYSLDDLKEVQCYICRCFGHL-------------CCVNISDAVPGEVS----------CF 304
DL+E CY C GH+ CC N PG ++ C+
Sbjct: 61 -----DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGK--PGHLARDCDHADEQKCY 113
Query: 305 RCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKV 357
CG+ GH + + CY CG GH A C +S+V
Sbjct: 114 SCGEFGHI-----------------QKDCTKVKCYRCGETGHVAINCSKTSEV 149
>gi|325183159|emb|CCA17617.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 461
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 124/310 (40%), Gaps = 53/310 (17%)
Query: 176 PDRGW------QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICK 229
PDR + C+NCG+ GH++ C + K KPC+ CG H C + C C
Sbjct: 183 PDRRYFVTDLSTKCFNCGQTGHLSNAC-TNTKLLKPCYFCGISGHNSYACPRTP-CGSCL 240
Query: 230 KGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC 289
+ GH C ++ N +V CG GH SC+ D+K ++C +C GH
Sbjct: 241 QIGHITSRCSNR-SIQLNNCKV---CGRIGHTEESCQ--LKSKDVKAIKCMVCMKTGHSH 294
Query: 290 CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSR-----GETVEASPSS---CYNC 341
C + + C C N ++ C R + + + SS C+ C
Sbjct: 295 CTPLPQPSDRRLFCPNCA--------GNHRLKRCRNQREGIRLSDVIPSFSSSNVKCFLC 346
Query: 342 GAEGHFARECVSSSKVRKRNIDASTPTFRPHRENKDHSGIKSAPHDLGKVHKRKKTQHEE 401
GH A EC RK D + FR D+ + +A + + RK+++
Sbjct: 347 NHMGHIAAECSH----RKSTRDGA--CFR----CDDYGHMANACPEFARDGSRKRSRLAY 396
Query: 402 RGIMTSRKSKQRGGWITDDPGDISYGK-PKRNH-----WRSPGTPSSKAHKISAITSGGH 455
G R S + D G + K K NH W++ PSS ++++A
Sbjct: 397 NG--NDRSSYNSNAYHDTDAGYTEHSKFTKPNHSSSGKWKASSNPSSAYNRLNAA----- 449
Query: 456 FSSPQSSIKR 465
SSP SS +R
Sbjct: 450 LSSPPSSFRR 459
>gi|213623438|gb|AAI69746.1| CNBP protein [Xenopus laevis]
Length = 178
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 67/148 (45%), Gaps = 30/148 (20%)
Query: 206 CFVCGSLEHGVRQCSKAQD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFS 264
C+ CG H + C +D C+ C +GGH AKDC + K + Q C CG GH
Sbjct: 55 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPRK---EREQCCYNCGKPGHLARD 111
Query: 265 CRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACA 324
C D E +CY C FGH+ D +V C+RCG+ GH ++ +
Sbjct: 112 C------DHADEHKCYSCGEFGHI----QKDCT--KVKCYRCGETGHVAINCS------- 152
Query: 325 RSRGETVEASPSSCYNCGAEGHFARECV 352
+ S +CY CG GH AREC
Sbjct: 153 -------KTSEVNCYRCGESGHLARECT 173
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 60/132 (45%), Gaps = 40/132 (30%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDC--P 239
CYNCG GH+A +C+ K ++ C C+ C K GH A+DC
Sbjct: 74 ACYNCGRGGHIAKDCKEPRKEREQC------------------CYNCGKPGHLARDCDHA 115
Query: 240 DKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPG 299
D+HK C CG+ GH D +V+CY C GH V I+ +
Sbjct: 116 DEHK--------CYSCGEFGHIQ---------KDCTKVKCYRCGETGH---VAINCSKTS 155
Query: 300 EVSCFRCGQLGH 311
EV+C+RCG+ GH
Sbjct: 156 EVNCYRCGESGH 167
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A + K C+ CG H + C+K + C+ C + GH
Sbjct: 90 EPRKEREQCCYNCGKPGHLARDCDHADEHK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 146
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 147 VAINCS-------KTSEVNCYRCGESGH 167
>gi|432090075|gb|ELK23671.1| Cellular nucleic acid-binding protein [Myotis davidii]
Length = 142
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 67/148 (45%), Gaps = 30/148 (20%)
Query: 206 CFVCGSLEHGVRQCSKAQD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFS 264
C+ CG H + C +D C+ C +GGH AKDC + + + Q C CG GH
Sbjct: 19 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARD 75
Query: 265 CRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACA 324
C D E +CY C FGH+ D +V C+RCG+ GH ++ +
Sbjct: 76 C------DHADEQKCYSCGEFGHI----QKDCT--KVKCYRCGETGHVAINCS------- 116
Query: 325 RSRGETVEASPSSCYNCGAEGHFARECV 352
+ S +CY CG GH AREC
Sbjct: 117 -------KTSEVNCYRCGESGHLARECT 137
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KDC
Sbjct: 38 ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDC 97
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CG++GH +C + EV CY C GHL
Sbjct: 98 ---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 132
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 54 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 110
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 111 VAINCS-------KTSEVNCYRCGESGH 131
>gi|387017354|gb|AFJ50795.1| Cellular nucleic acid binding protein [Crotalus adamanteus]
Length = 171
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 79/190 (41%), Gaps = 49/190 (25%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP------------------CFVCGSLEHGVRQCSKAQD 224
C+ CG GH A C + + R + C+ CG H + C +D
Sbjct: 6 CFKCGRTGHWARECPTGIGRGRGMRSRGRGFQFMSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 225 --CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYIC 282
C+ C +GGH AKDC + + + Q C CG GH C D E +CY C
Sbjct: 66 EACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSC 116
Query: 283 RCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCG 342
FGH+ D +V C+RCG+ GH ++ + + S +CY CG
Sbjct: 117 GEFGHI----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCG 156
Query: 343 AEGHFARECV 352
GH AREC
Sbjct: 157 ESGHLARECT 166
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 54/111 (48%), Gaps = 18/111 (16%)
Query: 181 QTCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKD 237
+ CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KD
Sbjct: 66 EACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKD 125
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C C +CG++GH +C + EV CY C GHL
Sbjct: 126 C---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 161
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 83 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 139
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 140 VAINCS-------KTSEVNCYRCGESGH 160
>gi|156544377|ref|XP_001607405.1| PREDICTED: hypothetical protein LOC100123711 [Nasonia vitripennis]
Length = 531
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 217 RQCSKA------QDCFICKKGGHRAKDCPD--KHKSGFQNAQVCLKCGDSGHDMFSCRNS 268
R+C KA Q CF C+K GH DCP+ K ++G +C KCG + H F C+ +
Sbjct: 380 RKCEKALARVRRQVCFHCRKAGHNLSDCPELGKEEAG---TGICFKCGSTEHTHFECKVN 436
Query: 269 YSLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
S DD + +C+ICR GH+ C N P SC CG + H
Sbjct: 437 KS-DDYRYAKCFICREQGHIAKQCPDNPKGLYPDGGSCKICGDVTH 481
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 18/120 (15%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKK---PCFVCGSLEHGVRQC--SKAQD-----CFICKK 230
Q C++C + GH +C K + CF CGS EH +C +K+ D CFIC++
Sbjct: 392 QVCFHCRKAGHNLSDCPELGKEEAGTGICFKCGSTEHTHFECKVNKSDDYRYAKCFICRE 451
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC--------RNSYSLDDLKEVQCYIC 282
GH AK CPD K + + C CGD H C + +LD +K+ +
Sbjct: 452 QGHIAKQCPDNPKGLYPDGGSCKICGDVTHLKKDCPDLVKEKEETAITLDTIKDANLEVL 511
>gi|2665788|gb|AAB88490.1| cellular nucleic acid binding protein [Gallus gallus]
Length = 172
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 79/191 (41%), Gaps = 50/191 (26%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP-------------------CFVCGSLEHGVRQCSKAQ 223
C+ CG GH A C + + R + C+ CG H + C +
Sbjct: 6 CFKCGRTGHWARECPTGIGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLAKDCDLQE 65
Query: 224 D--CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYI 281
D C+ C +GGH AKDC + + + Q C CG GH C D E +CY
Sbjct: 66 DEACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYS 116
Query: 282 CRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNC 341
C FGH+ D +V C+RCG+ GH ++ + + S +CY C
Sbjct: 117 CGEFGHI----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRC 156
Query: 342 GAEGHFARECV 352
G GH AREC
Sbjct: 157 GESGHLARECT 167
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 54/111 (48%), Gaps = 18/111 (16%)
Query: 181 QTCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKD 237
+ CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KD
Sbjct: 67 EACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKD 126
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C C +CG++GH +C + EV CY C GHL
Sbjct: 127 C---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 162
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 84 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 140
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 141 VAINCS-------KTSEVNCYRCGESGH 161
>gi|397570339|gb|EJK47249.1| hypothetical protein THAOC_34043 [Thalassiosira oceanica]
Length = 628
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 77/186 (41%), Gaps = 9/186 (4%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C NCGE GHMA +C + KPC +C L H + C CF C GH +++C
Sbjct: 419 CNNCGEVGHMAKDCPKD-GQLKPCGLCAGLGHEMWACPMKSICFNCGVPGHVSREC--NQ 475
Query: 243 KSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNIS--DAVPGE 300
+ G ++C C S H F CR ++ C G L + + G
Sbjct: 476 RRGVPERKICTICFRSDHHRFQCRERPWNAPFQDAICMQTGRQGQLMKNEMRWFFGLRG- 534
Query: 301 VSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVRKR 360
VSCF CGQ GH G+ C + + + E + + G E + +C S V R
Sbjct: 535 VSCFNCGQKGHLGI---DCRRPNVEACMKNPELAQAEIDMAGEEAKVSFKCQISDAVESR 591
Query: 361 NIDAST 366
A+
Sbjct: 592 GTTAAV 597
>gi|410988851|ref|XP_004000690.1| PREDICTED: cellular nucleic acid-binding protein-like [Felis catus]
Length = 171
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 80/195 (41%), Gaps = 49/195 (25%)
Query: 183 CYNCGEEGHMAVNCR-------------------SAVKRKKPCFVCGSLEHGVRQCSKAQ 223
C+ CG GH A C S+ C+ CG H + C +
Sbjct: 6 CFKCGRSGHWARGCPRGGGSQGHGARGRVRGSQCSSTNPSDICYRCGESGHHAKNCDLLE 65
Query: 224 D-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYIC 282
D C+ C + GH AKDC + + + Q C CG GH C D +E +CY C
Sbjct: 66 DICYNCGRSGHIAKDCIEPKR---EREQCCYTCGRPGHLARDC------DRQEEQKCYSC 116
Query: 283 RCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCG 342
+GH+ D +V C+RCG++GH ++ + + S +CY CG
Sbjct: 117 GEYGHI----QKDCT--QVKCYRCGEIGHMAINCS--------------KTSEVNCYRCG 156
Query: 343 AEGHFARECVSSSKV 357
GH AREC + +
Sbjct: 157 ESGHLARECPTEATA 171
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 63/154 (40%), Gaps = 26/154 (16%)
Query: 223 QDCFICKKGGHRAKDCPDKHKSGFQNAQ---------------VCLKCGDSGHDMFSCRN 267
++CF C + GH A+ CP S A+ +C +CG+SGH +C
Sbjct: 4 KECFKCGRSGHWARGCPRGGGSQGHGARGRVRGSQCSSTNPSDICYRCGESGHHAKNC-- 61
Query: 268 SYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSR 327
DL E CY C GH+ I E C+ CG+ GH + + S
Sbjct: 62 -----DLLEDICYNCGRSGHIAKDCIEPKREREQCCYTCGRPGHLARDCDRQEEQKCYSC 116
Query: 328 GE----TVEASPSSCYNCGAEGHFARECVSSSKV 357
GE + + CY CG GH A C +S+V
Sbjct: 117 GEYGHIQKDCTQVKCYRCGEIGHMAINCSKTSEV 150
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 173 FDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGG 232
+P Q CY CG GH+A +C ++K C+ CG H + C++ + C+ C + G
Sbjct: 82 IEPKREREQCCYTCGRPGHLARDCDRQEEQK--CYSCGEYGHIQKDCTQVK-CYRCGEIG 138
Query: 233 HRAKDCPDKHKSGFQNAQV-CLKCGDSGHDMFSC 265
H A +C + ++V C +CG+SGH C
Sbjct: 139 HMAINCS-------KTSEVNCYRCGESGHLAREC 165
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 7/61 (11%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD--CFICKKGGHRAKDC 238
Q CY+CGE GH+ +C + VK C+ CG + H CSK + C+ C + GH A++C
Sbjct: 111 QKCYSCGEYGHIQKDC-TQVK----CYRCGEIGHMAINCSKTSEVNCYRCGESGHLAREC 165
Query: 239 P 239
P
Sbjct: 166 P 166
>gi|262072939|dbj|BAI47777.1| CCHC-type zinc finger, nucleic acid binding protein [Sus scrofa]
Length = 137
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 67/148 (45%), Gaps = 30/148 (20%)
Query: 206 CFVCGSLEHGVRQCSKAQD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFS 264
C+ CG H + C +D C+ C +GGH AKDC + + + Q C CG GH
Sbjct: 14 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARD 70
Query: 265 CRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACA 324
C D E +CY C FGH+ D +V C+RCG+ GH ++ +
Sbjct: 71 C------DHADEQKCYSCGEFGHI----QKDCT--KVKCYRCGETGHVAINCS------- 111
Query: 325 RSRGETVEASPSSCYNCGAEGHFARECV 352
+ S +CY CG GH AREC
Sbjct: 112 -------KTSEVNCYRCGESGHLARECT 132
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KDC
Sbjct: 33 ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDC 92
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CG++GH +C + EV CY C GHL
Sbjct: 93 ---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 127
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 49 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 105
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 106 VAINCS-------KTSEVNCYRCGESGH 126
>gi|149642096|ref|XP_001505515.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 2
[Ornithorhynchus anatinus]
Length = 177
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 67/148 (45%), Gaps = 30/148 (20%)
Query: 206 CFVCGSLEHGVRQCSKAQD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFS 264
C+ CG H + C +D C+ C +GGH AKDC + + + Q C CG GH
Sbjct: 54 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARD 110
Query: 265 CRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACA 324
C D E +CY C FGH+ D +V C+RCG+ GH ++ +
Sbjct: 111 C------DHADEQKCYSCGEFGHI----QKDCT--KVKCYRCGETGHVAINCS------- 151
Query: 325 RSRGETVEASPSSCYNCGAEGHFARECV 352
+ S +CY CG GH AREC
Sbjct: 152 -------KTSEVNCYRCGESGHLARECT 172
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KDC
Sbjct: 73 ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDC 132
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CG++GH +C + EV CY C GHL
Sbjct: 133 ---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 167
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 89 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 145
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 146 VAINCS-------KTSEVNCYRCGESGH 166
>gi|345562029|gb|EGX45101.1| hypothetical protein AOL_s00173g202 [Arthrobotrys oligospora ATCC
24927]
Length = 549
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 90/212 (42%), Gaps = 32/212 (15%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
CYNC E GH++ C + + P + + C C + GHRA+DCP++
Sbjct: 295 CYNCKETGHVSRACPQERQARDPSDI------------PSIKCVNCDQEGHRARDCPEER 342
Query: 243 KSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVS 302
K +N C CG+ GH+ C D VQC C GH + DA +++
Sbjct: 343 KQ-RRNPNACRNCGEEGHEAKECEKPR---DASNVQCRKCEKMGHF-SKDCPDAP--KMT 395
Query: 303 CFRCGQLGH---------TGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECV- 352
C C Q GH G+ N+C + R R + C NC EGH R+C
Sbjct: 396 CRNCDQEGHRAAECPEPKKGMTCNNCGEEGHR-RVDCTNPRKIICNNCDEEGHVGRDCPK 454
Query: 353 --SSSKVRKRNIDASTPTFRPHRENKDHSGIK 382
++V+ RN D + + + +D S IK
Sbjct: 455 PRDPARVKCRNCDEMGHSAKECPKPRDMSRIK 486
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 85/206 (41%), Gaps = 45/206 (21%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVK-RKKP--CFVCGSLEHGVRQCSKAQD-----C 225
DP D C NC +EGH A +C K R+ P C CG H ++C K +D C
Sbjct: 316 DPSDIPSIKCVNCDQEGHRARDCPEERKQRRNPNACRNCGEEGHEAKECEKPRDASNVQC 375
Query: 226 FICKKGGHRAKDCPDKHKSGFQN----------------AQVCLKCGDSGHDMFSCRNSY 269
C+K GH +KDCPD K +N C CG+ GH C N
Sbjct: 376 RKCEKMGHFSKDCPDAPKMTCRNCDQEGHRAAECPEPKKGMTCNNCGEEGHRRVDCTNP- 434
Query: 270 SLDDLKEVQCYICRCFGHLC--CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSR 327
+++ C C GH+ C D P V C C ++GH+ + C + R
Sbjct: 435 -----RKIICNNCDEEGHVGRDCPKPRD--PARVKCRNCDEMGHSA-------KECPKPR 480
Query: 328 GETVEASPSSCYNCGAEGHFARECVS 353
+ S C CG GH++R C +
Sbjct: 481 ----DMSRIKCNECGEMGHWSRNCTN 502
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 50/128 (39%), Gaps = 19/128 (14%)
Query: 145 ADNGDEGVTTVEISDNIVLRKLLRGPRYF-------DPPDRGWQTCYNCGEEGHMAVNCR 197
D G+ + ++ + + G +F D P C C EEGH A C
Sbjct: 11 VDEGEWVPPPMPVATGLTTNNISSGDNFFEDGADGGDRPRGAPGACRRCNEEGHFAAECP 70
Query: 198 SAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGD 257
+ + C CG H +C + C IC GH +CP K + Q C CG+
Sbjct: 71 N-----QKCSCCGQKGHSASKCPTPK-CNICNTEGHIPFECPQK------DNQACRHCGE 118
Query: 258 SGHDMFSC 265
+GH + C
Sbjct: 119 TGHMVKEC 126
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 55/134 (41%), Gaps = 12/134 (8%)
Query: 158 SDNIVLRKLLRGPRYF-DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGV 216
+ N+ RK + + D PD TC NC +EGH A C K+ C CG H
Sbjct: 370 ASNVQCRKCEKMGHFSKDCPDAPKMTCRNCDQEGHRAAECPEP-KKGMTCNNCGEEGHRR 428
Query: 217 RQCSKAQD--CFICKKGGHRAKDCPDKHKSGFQNAQV-CLKCGDSGHDMFSCRNSYSLDD 273
C+ + C C + GH +DCP A+V C C + GH C D
Sbjct: 429 VDCTNPRKIICNNCDEEGHVGRDCPKPRDP----ARVKCRNCDEMGHSAKECPKPR---D 481
Query: 274 LKEVQCYICRCFGH 287
+ ++C C GH
Sbjct: 482 MSRIKCNECGEMGH 495
>gi|395863010|ref|XP_003803706.1| PREDICTED: cellular nucleic acid-binding protein-like [Otolemur
garnettii]
Length = 170
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 78/188 (41%), Gaps = 48/188 (25%)
Query: 183 CYNCGEEGHMAVNCR------------------SAVKRKKPCFVCGSLEHGVRQCSKAQD 224
C+ CG GH A C S+ C+ CG H + C +D
Sbjct: 6 CFKCGRSGHWARGCPRGGARGRGARGRGRGSPCSSTTFSDICYRCGESGHHAKNCDLLED 65
Query: 225 -CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICR 283
C+ C + GH AKDC + + + Q C CG GH C D +E +CY C
Sbjct: 66 ICYNCGRSGHIAKDCNEPKR---EREQCCYSCGRPGHLARDC------DHQEEQKCYSCG 116
Query: 284 CFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGA 343
FGH+ D +V C+RCG+ GH ++ + +A+ +CY CG
Sbjct: 117 EFGHI----QKDCT--QVKCYRCGETGHVAINCS--------------KATEVNCYRCGE 156
Query: 344 EGHFAREC 351
GH AREC
Sbjct: 157 SGHLAREC 164
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CY+CG GH+A +C ++K C+ CG H + C++ + C+ C + GH
Sbjct: 82 EPKREREQCCYSCGRPGHLARDCDHQEEQK--CYSCGEFGHIQKDCTQVK-CYRCGETGH 138
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGH 260
A +C + C +CG+SGH
Sbjct: 139 VAINCSKATEVN------CYRCGESGH 159
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 7/61 (11%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD--CFICKKGGHRAKDC 238
Q CY+CGE GH+ +C + VK C+ CG H CSKA + C+ C + GH A++C
Sbjct: 110 QKCYSCGEFGHIQKDC-TQVK----CYRCGETGHVAINCSKATEVNCYRCGESGHLAREC 164
Query: 239 P 239
P
Sbjct: 165 P 165
>gi|334342426|ref|XP_001378413.2| PREDICTED: cellular nucleic acid-binding protein-like isoform 1
[Monodelphis domestica]
gi|395516728|ref|XP_003762539.1| PREDICTED: cellular nucleic acid-binding protein isoform 1
[Sarcophilus harrisii]
Length = 177
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 67/148 (45%), Gaps = 30/148 (20%)
Query: 206 CFVCGSLEHGVRQCSKAQD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFS 264
C+ CG H + C +D C+ C +GGH AKDC + + + Q C CG GH
Sbjct: 54 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARD 110
Query: 265 CRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACA 324
C D E +CY C FGH+ D +V C+RCG+ GH ++ +
Sbjct: 111 C------DHADEQKCYSCGEFGHI----QKDCT--KVKCYRCGETGHVAINCS------- 151
Query: 325 RSRGETVEASPSSCYNCGAEGHFARECV 352
+ S +CY CG GH AREC
Sbjct: 152 -------KTSEVNCYRCGESGHLARECT 172
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KDC
Sbjct: 73 ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDC 132
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CG++GH +C + EV CY C GHL
Sbjct: 133 ---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 167
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 89 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 145
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 146 VAINCS-------KTSEVNCYRCGESGH 166
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 64/180 (35%), Gaps = 70/180 (38%)
Query: 222 AQDCFICKKGGHRAKDCPDKHKS----------------GFQNAQ-----VCLKCGDSGH 260
+ +CF C + GH A++CP GFQ +C +CG+SGH
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSARGFQFVSSSLPDICYRCGESGH 62
Query: 261 DMFSCRNSYSLDDLKEVQCYICRCFGHL-------------CCVNISDAVPGEVS----- 302
C DL+E CY C GH+ CC N PG ++
Sbjct: 63 LAKDC-------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGK--PGHLARDCDH 113
Query: 303 -----CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKV 357
C+ CG+ GH + + CY CG GH A C +S+V
Sbjct: 114 ADEQKCYSCGEFGHI-----------------QKDCTKVKCYRCGETGHVAINCSKTSEV 156
>gi|403291696|ref|XP_003936912.1| PREDICTED: cellular nucleic acid-binding protein-like [Saimiri
boliviensis boliviensis]
Length = 169
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 71/172 (41%), Gaps = 52/172 (30%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
TCY CGE GH A NC V G++ C+ C + GH AKDC +
Sbjct: 46 TCYRCGESGHQAKNC-----------VLGNI------------CYNCGRSGHIAKDCNEP 82
Query: 242 HKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEV 301
+ + Q C CG GH C D KE +CY C GH+ +V
Sbjct: 83 KR---ERDQCCYTCGRPGHLACDC------DRQKEQKCYACGQLGHI------QKDCAKV 127
Query: 302 SCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVS 353
C+RCG+ GH + + +Q +CY CG GH AREC S
Sbjct: 128 KCYRCGETGHMAISCSKAIQV--------------NCYRCGKPGHLARECPS 165
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 11/81 (13%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
Q CY CG GH+A +C ++++ C+ CG L H + C+K + C+ C + GH A C
Sbjct: 88 QCCYTCGRPGHLACDCDR--QKEQKCYACGQLGHIQKDCAKVK-CYRCGETGHMAISCS- 143
Query: 241 KHKSGFQNAQV-CLKCGDSGH 260
+ QV C +CG GH
Sbjct: 144 ------KAIQVNCYRCGKPGH 158
>gi|407917903|gb|EKG11203.1| Zinc finger CCHC-type protein [Macrophomina phaseolina MS6]
Length = 176
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 73/162 (45%), Gaps = 37/162 (22%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK--------AQDC 225
D P +G TCYNCGE+GH++ +C+ + +KPC+ CG + H R+C + Q+C
Sbjct: 23 DCPTKGNPTCYNCGEQGHLSRDCQQP-QAEKPCYRCGKVGHLSRECPEGGAPGMGAGQEC 81
Query: 226 FICKKGGHRAKDC-----------PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDL 274
+ C K GH A++C G Q C CG GH S D
Sbjct: 82 YKCGKVGHIARNCNSYGGGFGGGYGGGSGFGGPRGQTCYSCGGYGH--------MSRDCT 133
Query: 275 KEVQCYICRCFGHLCCVNISDAVPGEVS----CFRCGQLGHT 312
+ +CY C GHL S P E S C++C Q GH
Sbjct: 134 QGQKCYNCGEVGHL-----SRDCPSETSNERVCYKCKQPGHV 170
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 71/187 (37%), Gaps = 37/187 (19%)
Query: 172 YFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ---DCFIC 228
+ PP RG CYNCG+ H A +C K C+ CG H R C + Q C+ C
Sbjct: 3 FSAPPARG---CYNCGDTSHQARDC--PTKGNPTCYNCGEQGHLSRDCQQPQAEKPCYRC 57
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
K GH +++CP+ G Q C KCG GH +C +
Sbjct: 58 GKVGHLSRECPEGGAPGMGAGQECYKCGKVGHIARNCNSYGGGFGGGYG----------- 106
Query: 289 CCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFA 348
P +C+ CG GH C Q CYNCG GH +
Sbjct: 107 --GGSGFGGPRGQTCYSCGGYGHM---SRDCTQG-------------QKCYNCGEVGHLS 148
Query: 349 RECVSSS 355
R+C S +
Sbjct: 149 RDCPSET 155
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 48/102 (47%), Gaps = 19/102 (18%)
Query: 181 QTCYNCGEEGHMAVNCRSAV---------------KRKKPCFVCGSLEHGVRQCSKAQDC 225
Q CY CG+ GH+A NC S R + C+ CG H R C++ Q C
Sbjct: 79 QECYKCGKVGHIARNCNSYGGGFGGGYGGGSGFGGPRGQTCYSCGGYGHMSRDCTQGQKC 138
Query: 226 FICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
+ C + GH ++DCP + N +VC KC GH +C N
Sbjct: 139 YNCGEVGHLSRDCPSE----TSNERVCYKCKQPGHVQAACPN 176
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 31/149 (20%)
Query: 222 AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYI 281
A+ C+ C H+A+DCP K C CG+ GH C+ + E CY
Sbjct: 8 ARGCYNCGDTSHQARDCPTKGNP------TCYNCGEQGHLSRDCQQPQA-----EKPCYR 56
Query: 282 CRCFGHLCCVNISDAVPGEVS---CFRCGQLGHTGLHWNSCMQACARS----------RG 328
C GHL PG + C++CG++GH + NS RG
Sbjct: 57 CGKVGHLSRECPEGGAPGMGAGQECYKCGKVGHIARNCNSYGGGFGGGYGGGSGFGGPRG 116
Query: 329 ETVEASPSSCYNCGAEGHFARECVSSSKV 357
+T CY+CG GH +R+C K
Sbjct: 117 QT-------CYSCGGYGHMSRDCTQGQKC 138
>gi|358389553|gb|EHK27145.1| hypothetical protein TRIVIDRAFT_188061 [Trichoderma virens Gv29-8]
Length = 458
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 59/138 (42%), Gaps = 18/138 (13%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ-----DCFICKKGGHRAK 236
+CYNCG EGH +C K C CG H ++C + +C C K GH AK
Sbjct: 288 SCYNCGAEGHRVRDCPEPRVDKFACKNCGKSGHNAKECEEPPNMDNVECRKCNKTGHFAK 347
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNIS 294
DCPD ++ C CG GH C ++D+ V C C GH C
Sbjct: 348 DCPDG------GSRACRNCGQEGHISKECDQPKNMDN---VTCRNCEETGHFSKECPKPR 398
Query: 295 DAVPGEVSCFRCGQLGHT 312
D +V C C Q GHT
Sbjct: 399 DW--SKVQCSNCEQFGHT 414
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 72/181 (39%), Gaps = 46/181 (25%)
Query: 177 DRGWQTCYNCGEEGHMAVNCR------SAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKK 230
DRG CYNCGE GH C S+ K K C+ CG+
Sbjct: 254 DRGVPKCYNCGELGHTTKGCSQEKTEPSSEKPKISCYNCGAE------------------ 295
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCC 290
GHR +DCP+ F C CG SGH+ C ++D+ V+C C GH
Sbjct: 296 -GHRVRDCPEPRVDKF----ACKNCGKSGHNAKECEEPPNMDN---VECRKCNKTGHFA- 346
Query: 291 VNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARE 350
+ D G +C CGQ GH ++ + +C NC GHF++E
Sbjct: 347 KDCPDG--GSRACRNCGQEGHI-----------SKECDQPKNMDNVTCRNCEETGHFSKE 393
Query: 351 C 351
C
Sbjct: 394 C 394
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Query: 206 CFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMF 263
CF CG H +C KA Q C CKK GH KDCP+ +C CG GH
Sbjct: 69 CFGCGEEGHRRAECPKAGEQTCHYCKKEGHMRKDCPEAP------PMLCSNCGQEGHFRN 122
Query: 264 SCRNSYSLD 272
SC N+ ++
Sbjct: 123 SCENARKIN 131
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 303 CFRCGQLGHTGLHW-NSCMQAC------ARSRGETVEASPSSCYNCGAEGHFARECVSSS 355
CF CG+ GH + Q C R + EA P C NCG EGHF C ++
Sbjct: 69 CFGCGEEGHRRAECPKAGEQTCHYCKKEGHMRKDCPEAPPMLCSNCGQEGHFRNSCENAR 128
Query: 356 KVRKRNIDASTP 367
K+ + ++ +TP
Sbjct: 129 KINRDHVADTTP 140
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
Query: 159 DNIVLRKLLRGPRYF-DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKK-PCFVCGSLEHGV 216
DN+ RK + + D PD G + C NCG+EGH++ C C C H
Sbjct: 332 DNVECRKCNKTGHFAKDCPDGGSRACRNCGQEGHISKECDQPKNMDNVTCRNCEETGHFS 391
Query: 217 RQCSKAQD-----CFICKKGGHRAKDC--PDKHKSGFQN 248
++C K +D C C++ GH C P K ++N
Sbjct: 392 KECPKPRDWSKVQCSNCEQFGHTKVRCKMPPKESDAYEN 430
>gi|121702271|ref|XP_001269400.1| zinc knuckle domain protein [Aspergillus clavatus NRRL 1]
gi|119397543|gb|EAW07974.1| zinc knuckle domain protein [Aspergillus clavatus NRRL 1]
Length = 177
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 15/110 (13%)
Query: 169 GPRYFDPPDRGWQTCYNCGEEGHMAVNC-----------RSAVKRKKPCFVCGSLEHGVR 217
G Y P G Q CY CG+ GH+A NC R++ C+ CG H R
Sbjct: 72 GDNYGGPSTGGGQECYKCGQVGHIARNCSQGGNYGGGYGGGFGGRQQTCYSCGGFGHMAR 131
Query: 218 QCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
C++ Q C+ C + GH ++DCP + K +VC KC GH +C N
Sbjct: 132 DCTQGQKCYNCGEVGHVSRDCPTEAK----GERVCYKCKQPGHVQAACPN 177
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 69/164 (42%), Gaps = 39/164 (23%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA----------- 222
D P +G TCYNCG +GH++ C A K K C+ CG H R+C ++
Sbjct: 22 DCPKKGTPTCYNCGGQGHVSRECTVAPKEKS-CYRCGVAGHISRECPQSGAGDNYGGPST 80
Query: 223 ---QDCFICKKGGHRAKDCPDKHKSGFQNA-------QVCLKCGDSGHDMFSCRNSYSLD 272
Q+C+ C + GH A++C G Q C CG GH + D
Sbjct: 81 GGGQECYKCGQVGHIARNCSQGGNYGGGYGGGFGGRQQTCYSCGGFGH--------MARD 132
Query: 273 DLKEVQCYICRCFGHLCCVNISDAVP----GEVSCFRCGQLGHT 312
+ +CY C GH +S P GE C++C Q GH
Sbjct: 133 CTQGQKCYNCGEVGH-----VSRDCPTEAKGERVCYKCKQPGHV 171
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 77/190 (40%), Gaps = 37/190 (19%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVKRKKP-CFVCGSLEHGVRQCS---KAQDCFICKKGGHR 234
G + C+NCG+ H A +C K+ P C+ CG H R+C+ K + C+ C GH
Sbjct: 6 GGRGCFNCGDASHQARDC---PKKGTPTCYNCGGQGHVSRECTVAPKEKSCYRCGVAGHI 62
Query: 235 AKDCPDKHKS------GFQNAQVCLKCGDSGHDMFSCRN-------SYSLDDLKEVQCYI 281
+++CP Q C KCG GH +C ++ CY
Sbjct: 63 SRECPQSGAGDNYGGPSTGGGQECYKCGQVGHIARNCSQGGNYGGGYGGGFGGRQQTCYS 122
Query: 282 CRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNC 341
C FGH+ D G+ C+ CG++GH + ++GE V CY C
Sbjct: 123 CGGFGHM----ARDCTQGQ-KCYNCGEVGHVSRDCPT------EAKGERV------CYKC 165
Query: 342 GAEGHFAREC 351
GH C
Sbjct: 166 KQPGHVQAAC 175
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 56/152 (36%), Gaps = 31/152 (20%)
Query: 220 SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQC 279
+ + CF C H+A+DCP K C CG GH C + KE C
Sbjct: 5 AGGRGCFNCGDASHQARDCPKK------GTPTCYNCGGQGHVSRECTVA-----PKEKSC 53
Query: 280 YICRCFGHLCCVNISDAVP--------------GEVSCFRCGQLGHTGLHWNSCMQACAR 325
Y C GH IS P G C++CGQ+GH + +
Sbjct: 54 YRCGVAGH-----ISRECPQSGAGDNYGGPSTGGGQECYKCGQVGHIARNCSQGGNY-GG 107
Query: 326 SRGETVEASPSSCYNCGAEGHFARECVSSSKV 357
G +CY+CG GH AR+C K
Sbjct: 108 GYGGGFGGRQQTCYSCGGFGHMARDCTQGQKC 139
>gi|4929293|gb|AAD33937.1|AF144698_1 cellular nucleic acid binding protein [Rhinella arenarum]
Length = 178
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 67/148 (45%), Gaps = 30/148 (20%)
Query: 206 CFVCGSLEHGVRQCSKAQD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFS 264
C+ CG H + C +D C+ C +GGH AKDC + K + Q C CG GH
Sbjct: 55 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPRK---EREQCCYNCGKPGHLARD 111
Query: 265 CRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACA 324
C ++ E +CY C FGH+ D +V C+RCG GH ++ +
Sbjct: 112 CEHA------DEQKCYSCGEFGHI----QKDCT--KVKCYRCGDTGHVAINCS------- 152
Query: 325 RSRGETVEASPSSCYNCGAEGHFARECV 352
+ S +CY CG GH AREC
Sbjct: 153 -------KTSEVNCYRCGESGHLARECT 173
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG GH+A +C+ K R++ C+ CG H R C A Q C+ C + GH KDC
Sbjct: 74 ACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDCEHADEQKCYSCGEFGHIQKDC 133
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CGD+GH +C + EV CY C GHL
Sbjct: 134 ---------TKVKCYRCGDTGHVAINCSKT------SEVNCYRCGESGHL 168
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C GH
Sbjct: 90 EPRKEREQCCYNCGKPGHLARDCEHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGDTGH 146
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 147 VAINCS-------KTSEVNCYRCGESGH 167
>gi|284925124|ref|NP_001165425.1| cellular nucleic acid binding protein b [Xenopus laevis]
gi|1531585|emb|CAA69031.1| cellular nucleic acid binding protein [Xenopus laevis]
Length = 178
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 67/148 (45%), Gaps = 30/148 (20%)
Query: 206 CFVCGSLEHGVRQCSKAQD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFS 264
C+ CG H + C +D C+ C +GGH AKDC + K + Q C CG GH
Sbjct: 55 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPRK---EREQCCYNCGKPGHLARD 111
Query: 265 CRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACA 324
C ++ E +CY C FGH+ D +V C+RCG GH ++ +
Sbjct: 112 CEHA------DEQKCYSCGEFGHI----QKDCT--KVKCYRCGDTGHVAINCS------- 152
Query: 325 RSRGETVEASPSSCYNCGAEGHFARECV 352
+ S +CY CG GH AREC
Sbjct: 153 -------KTSEVNCYRCGESGHLARECT 173
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG GH+A +C+ K R++ C+ CG H R C A Q C+ C + GH KDC
Sbjct: 74 ACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDCEHADEQKCYSCGEFGHIQKDC 133
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CGD+GH +C + EV CY C GHL
Sbjct: 134 ---------TKVKCYRCGDTGHVAINCSKT------SEVNCYRCGESGHL 168
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C GH
Sbjct: 90 EPRKEREQCCYNCGKPGHLARDCEHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGDTGH 146
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 147 VAINCS-------KTSEVNCYRCGESGH 167
>gi|58004792|gb|AAW62457.1| cellular nucleic acid binding protein mutant 2-7 [synthetic
construct]
Length = 128
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 67/148 (45%), Gaps = 30/148 (20%)
Query: 206 CFVCGSLEHGVRQCSKAQD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFS 264
C+ CG H + C +D C+ C +GGH AKDC + K + Q C CG GH
Sbjct: 5 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPRK---EREQCCYNCGKPGHLARD 61
Query: 265 CRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACA 324
C ++ E +CY C FGH+ D +V C+RCG GH ++ +
Sbjct: 62 CEHA------DEQKCYSCGEFGHI----QKDCT--KVKCYRCGDTGHVAINCS------- 102
Query: 325 RSRGETVEASPSSCYNCGAEGHFARECV 352
+ S +CY CG GH AREC
Sbjct: 103 -------KTSEVNCYRCGESGHLARECT 123
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG GH+A +C+ K R++ C+ CG H R C A Q C+ C + GH KDC
Sbjct: 24 ACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDCEHADEQKCYSCGEFGHIQKDC 83
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CGD+GH +C + EV CY C GHL
Sbjct: 84 ---------TKVKCYRCGDTGHVAINCSKT------SEVNCYRCGESGHL 118
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C GH
Sbjct: 40 EPRKEREQCCYNCGKPGHLARDCEHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGDTGH 96
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 97 VAINCS-------KTSEVNCYRCGESGH 117
>gi|449446157|ref|XP_004140838.1| PREDICTED: uncharacterized protein LOC101212555 [Cucumis sativus]
Length = 396
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 206 CFVCGSLEHGVRQCS------KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSG 259
CF+C + +H + C K + C +C++ GH K+CPDK++ G + ++C CG++G
Sbjct: 78 CFICKANDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKNE-GTVDKKLCYNCGETG 136
Query: 260 HDMFSCRNSYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGHTG 313
H + +C K C+IC GHL C N P C CG++ H
Sbjct: 137 HSLANCPQPLQDGGTKFASCFICNESGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLA 193
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 15/80 (18%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
+ CYNCGE GH NC L+ G +K CFIC + GH +K+CP
Sbjct: 127 KLCYNCGETGHSLANCPQP------------LQDGG---TKFASCFICNESGHLSKNCPK 171
Query: 241 KHKSGFQNAQVCLKCGDSGH 260
+ C CG+ H
Sbjct: 172 NTHGIYPKGGCCKTCGEVTH 191
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 39/131 (29%)
Query: 223 QDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC--RNSYSLDDLKEVQCY 280
+ CFICK H AK CP+K + ++ ++CL C GH + +C +N ++D
Sbjct: 76 ESCFICKANDHIAKLCPEK--AQWEKNKICLLCRRRGHSLKNCPDKNEGTVD-------- 125
Query: 281 ICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYN 340
+ C+ CG+ GH+ + +Q G T AS C+
Sbjct: 126 -------------------KKLCYNCGETGHSLANCPQPLQD-----GGTKFAS---CFI 158
Query: 341 CGAEGHFAREC 351
C GH ++ C
Sbjct: 159 CNESGHLSKNC 169
>gi|71416081|ref|XP_810084.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
cruzi strain CL Brener]
gi|70874565|gb|EAN88233.1| universal minicircle sequence binding protein (UMSBP), putative
[Trypanosoma cruzi]
Length = 193
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 67/153 (43%), Gaps = 17/153 (11%)
Query: 173 FDPPDRGWQTCYNCGEEGHMAVNCRS---AVKRKKPCFVCGSLEHGVRQCSK-------A 222
P G + CYNCG+ GH++ C + + C+ CG H R+C
Sbjct: 36 IPPGAMGDRACYNCGQPGHLSRECPTRPPGAMGGRACYNCGQPGHLSRECPTRPPGAMGG 95
Query: 223 QDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN--SYSLDDLKEVQCY 280
+ C+ C + GH +++CP + G + C CG GH C N + + CY
Sbjct: 96 RACYNCGQPGHLSRECPTR-PPGAMGDRACYNCGRMGHLSHECPNRPAGGFRGVARGACY 154
Query: 281 ICRCFGHLC--CVNISDAVPGEVSCFRCGQLGH 311
C+ GHL C N GE +C+ CGQ GH
Sbjct: 155 HCQQEGHLARDCPNAPPG--GERACYNCGQTGH 185
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 74/188 (39%), Gaps = 28/188 (14%)
Query: 179 GWQTCYNCGEEGHMAVNCRS---AVKRKKPCFVCGSLEHGVRQCSK-------AQDCFIC 228
G TC+ CGE GH A C + + C+ CG H R+C + C+ C
Sbjct: 16 GGSTCHRCGETGHFARECPNIPPGAMGDRACYNCGQPGHLSRECPTRPPGAMGGRACYNC 75
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
+ GH +++CP + G + C CG GH C + + + CY C GHL
Sbjct: 76 GQPGHLSRECPTR-PPGAMGGRACYNCGQPGHLSREC-PTRPPGAMGDRACYNCGRMGHL 133
Query: 289 ---CCVNISDAVPGEV--SCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGA 343
C + G +C+ C Q GH AR +CYNCG
Sbjct: 134 SHECPNRPAGGFRGVARGACYHCQQEGHL-----------ARDCPNAPPGGERACYNCGQ 182
Query: 344 EGHFAREC 351
GH +R C
Sbjct: 183 TGHISRAC 190
>gi|149237715|ref|XP_001524734.1| zinc-finger protein GIS2 [Lodderomyces elongisporus NRRL YB-4239]
gi|146451331|gb|EDK45587.1| zinc-finger protein GIS2 [Lodderomyces elongisporus NRRL YB-4239]
Length = 178
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 77/192 (40%), Gaps = 39/192 (20%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
+TCY CGE GH+A +C + ++ C+ C H C + ++ C+ C GH
Sbjct: 7 RTCYKCGEVGHVADDC---TQEERLCYNCHKPGHESGDCPDPKQTNSKQCYSCGDVGHIQ 63
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSC--------------RNSYSLDDLKEVQCYI 281
+CP++ + C CG GH +C R SY CY
Sbjct: 64 TECPNQAQ-----GTKCYNCGQFGHISKNCTQESNGQTHAAPAFRKSYGRGPASGTTCYK 118
Query: 282 CRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNC 341
C H D G V C+ CG+ GH NS +G A +CYNC
Sbjct: 119 CGGPNHF----ARDCQAGNVKCYACGKAGHISKDCNS--------QGGAPNAGSKTCYNC 166
Query: 342 GAEGHFARECVS 353
G GH ++EC +
Sbjct: 167 GKPGHISKECTA 178
>gi|71418284|ref|XP_810806.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
cruzi strain CL Brener]
gi|70875395|gb|EAN88955.1| universal minicircle sequence binding protein (UMSBP), putative
[Trypanosoma cruzi]
Length = 193
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 69/152 (45%), Gaps = 15/152 (9%)
Query: 173 FDPPDRGWQTCYNCGEEGHMAVNCRS---AVKRKKPCFVCGSLEHGVRQCSK-------A 222
P G + CYNCG+ GH++ C + + C+ CG H R+C
Sbjct: 36 IPPGAMGDRACYNCGQPGHLSRECPTRPPGAMGGRACYNCGQPGHLSRECPTRPPGAMGG 95
Query: 223 QDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN--SYSLDDLKEVQCY 280
+ C+ C + GH +++CP + G + C CG GH C N + + CY
Sbjct: 96 RACYNCGQPGHLSRECPTR-PPGVMGDRACYNCGRMGHLSRECPNRPAGGFRGVARGACY 154
Query: 281 ICRCFGHLCCVNISDAVP-GEVSCFRCGQLGH 311
C+ GHL + +A P GE +C+ CGQ GH
Sbjct: 155 HCQQEGHL-ARDCPNAPPGGERACYNCGQTGH 185
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 74/188 (39%), Gaps = 28/188 (14%)
Query: 179 GWQTCYNCGEEGHMAVNCRS---AVKRKKPCFVCGSLEHGVRQCSK-------AQDCFIC 228
G TC+ CGE GH A C + + C+ CG H R+C + C+ C
Sbjct: 16 GGSTCHRCGETGHFARECPNIPPGAMGDRACYNCGQPGHLSRECPTRPPGAMGGRACYNC 75
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
+ GH +++CP + G + C CG GH C + + + CY C GHL
Sbjct: 76 GQPGHLSRECPTR-PPGAMGGRACYNCGQPGHLSREC-PTRPPGVMGDRACYNCGRMGHL 133
Query: 289 ---CCVNISDAVPGEV--SCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGA 343
C + G +C+ C Q GH AR +CYNCG
Sbjct: 134 SRECPNRPAGGFRGVARGACYHCQQEGHL-----------ARDCPNAPPGGERACYNCGQ 182
Query: 344 EGHFAREC 351
GH +R C
Sbjct: 183 TGHISRAC 190
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 56/140 (40%), Gaps = 13/140 (9%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
C C + GH A++CP+ G + C CG GH C + + CY C
Sbjct: 20 CHRCGETGHFARECPNI-PPGAMGDRACYNCGQPGHLSREC-PTRPPGAMGGRACYNCGQ 77
Query: 285 FGHLC--CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCG 342
GHL C G +C+ CGQ GH + R G + +CYNCG
Sbjct: 78 PGHLSRECPTRPPGAMGGRACYNCGQPGHLSRECPT------RPPGVMGD---RACYNCG 128
Query: 343 AEGHFARECVSSSKVRKRNI 362
GH +REC + R +
Sbjct: 129 RMGHLSRECPNRPAGGFRGV 148
>gi|449485612|ref|XP_004157224.1| PREDICTED: uncharacterized LOC101212555 [Cucumis sativus]
Length = 396
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 206 CFVCGSLEHGVRQC------SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSG 259
CF+C + +H + C K + C +C++ GH K+CPDK++ G + ++C CG++G
Sbjct: 78 CFICKANDHIAKLCPEKAQWEKNKICLLCRRRGHSLKNCPDKNE-GTVDKKLCYNCGETG 136
Query: 260 HDMFSCRNSYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGHTG 313
H + +C K C+IC GHL C N P C CG++ H
Sbjct: 137 HSLANCSQPLQDGGTKFASCFICNEGGHLSKNCPKNTHGIYPKGGCCKTCGEVTHLA 193
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 11/91 (12%)
Query: 181 QTCYNCGEEGHMAVNC---RSAVKRKKPCFVCGSLEHGVRQCS--------KAQDCFICK 229
+ C C GH NC KK C+ CG H + CS K CFIC
Sbjct: 101 KICLLCRRRGHSLKNCPDKNEGTVDKKLCYNCGETGHSLANCSQPLQDGGTKFASCFICN 160
Query: 230 KGGHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
+GGH +K+CP + C CG+ H
Sbjct: 161 EGGHLSKNCPKNTHGIYPKGGCCKTCGEVTH 191
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 35/83 (42%), Gaps = 12/83 (14%)
Query: 181 QTCYNCGEEGHMAVNCRSAVK----RKKPCFVCGSLEHGVRQCSKAQD--------CFIC 228
+ CYNCGE GH NC ++ + CF+C H + C K C C
Sbjct: 127 KLCYNCGETGHSLANCSQPLQDGGTKFASCFICNEGGHLSKNCPKNTHGIYPKGGCCKTC 186
Query: 229 KKGGHRAKDCPDKHKSGFQNAQV 251
+ H AKDCP K F A V
Sbjct: 187 GEVTHLAKDCPKKGTQVFDRAGV 209
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 39/131 (29%)
Query: 223 QDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC--RNSYSLDDLKEVQCY 280
+ CFICK H AK CP+K + ++ ++CL C GH + +C +N ++D
Sbjct: 76 ESCFICKANDHIAKLCPEK--AQWEKNKICLLCRRRGHSLKNCPDKNEGTVD-------- 125
Query: 281 ICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYN 340
+ C+ CG+ GH+ + + +Q G T AS C+
Sbjct: 126 -------------------KKLCYNCGETGHSLANCSQPLQD-----GGTKFAS---CFI 158
Query: 341 CGAEGHFAREC 351
C GH ++ C
Sbjct: 159 CNEGGHLSKNC 169
>gi|125549296|gb|EAY95118.1| hypothetical protein OsI_16935 [Oryza sativa Indica Group]
Length = 403
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 206 CFVCGSLEHGVRQC------SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSG 259
CF+C + +H + C K + C +C++ GH K+CPDK+ + + C CG+SG
Sbjct: 72 CFICKATDHVAKVCPEKSLWEKNKICLLCRQRGHSLKNCPDKNDENLK--KFCYNCGESG 129
Query: 260 HDMFSCRNSYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGHTGLH 315
H + C K C++C+ GHL C N P C CG++ H H
Sbjct: 130 HSLSKCPKPIENGGTKFASCFVCKQQGHLSKNCPENKHGIYPKGGCCKICGEVTHLAKH 188
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 10/97 (10%)
Query: 181 QTCYNCGEEGHMAVNC--RSAVKRKKPCFVCGSLEHGVRQC--------SKAQDCFICKK 230
+ C C + GH NC ++ KK C+ CG H + +C +K CF+CK+
Sbjct: 95 KICLLCRQRGHSLKNCPDKNDENLKKFCYNCGESGHSLSKCPKPIENGGTKFASCFVCKQ 154
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
GH +K+CP+ + C CG+ H C N
Sbjct: 155 QGHLSKNCPENKHGIYPKGGCCKICGEVTHLAKHCPN 191
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 12/71 (16%)
Query: 183 CYNCGEEGHMAVNCRSAVK----RKKPCFVCGSLEHGVRQCS--------KAQDCFICKK 230
CYNCGE GH C ++ + CFVC H + C K C IC +
Sbjct: 122 CYNCGESGHSLSKCPKPIENGGTKFASCFVCKQQGHLSKNCPENKHGIYPKGGCCKICGE 181
Query: 231 GGHRAKDCPDK 241
H AK CP++
Sbjct: 182 VTHLAKHCPNR 192
>gi|294948106|ref|XP_002785619.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239899598|gb|EER17415.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 141
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK--AQDCFICKKGG 232
P R CYNCG+ H+A +C + ++PCF CG + H R C++ + CF C + G
Sbjct: 39 PTGRRPMNCYNCGKPDHLARDCPNEQTNQRPCFKCGKVGHFARDCTEPDTRACFRCGQTG 98
Query: 233 HRAKDCP--------DKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
H A+DCP ++ G + C KCG GH C N
Sbjct: 99 HLARDCPNEDTRPESERAPRGRSEGRNCFKCGKPGHLARDCPN 141
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 44/96 (45%), Gaps = 16/96 (16%)
Query: 182 TCYNCGEEGHMAVNC------RSAVKRKKPCFVCGSLEHGVRQCSKAQ----DCFICKKG 231
TC+ C E GH A +C R +R C+ CG +H R C Q CF C K
Sbjct: 17 TCFICNEPGHFARDCPQASSSRPTGRRPMNCYNCGKPDHLARDCPNEQTNQRPCFKCGKV 76
Query: 232 GHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
GH A+DC + + + C +CG +GH C N
Sbjct: 77 GHFARDCTEP------DTRACFRCGQTGHLARDCPN 106
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 53/133 (39%), Gaps = 17/133 (12%)
Query: 225 CFICKKGGHRAKDCPDKHKS--GFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYIC 282
CFIC + GH A+DCP S + C CG H C N + + C+ C
Sbjct: 18 CFICNEPGHFARDCPQASSSRPTGRRPMNCYNCGKPDHLARDCPN----EQTNQRPCFKC 73
Query: 283 RCFGHLCCVNISDAV-PGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPS---SC 338
GH D P +CFRCGQ GH C R E S +C
Sbjct: 74 GKVGHF----ARDCTEPDTRACFRCGQTGHLA---RDCPNEDTRPESERAPRGRSEGRNC 126
Query: 339 YNCGAEGHFAREC 351
+ CG GH AR+C
Sbjct: 127 FKCGKPGHLARDC 139
>gi|50475|emb|CAA77897.1| cellular nucleic acid binding protein clone 14 [Mus musculus]
Length = 171
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 77/190 (40%), Gaps = 49/190 (25%)
Query: 183 CYNCGEEGHMAVNCRSA----------------VKRKKP--CFVCGSLEHGVRQCSKAQD 224
C+ CG GH A C + V P C+ CG H + C +D
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 225 --CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYIC 282
C+ C +GGH AKDC + + + Q C CG H C D E +CY C
Sbjct: 66 EACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPDHLARDC------DHADEQKCYSC 116
Query: 283 RCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCG 342
FGH+ D +V C+RCG+ GH ++ + + S +CY CG
Sbjct: 117 GEFGHI----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCG 156
Query: 343 AEGHFARECV 352
GH AREC
Sbjct: 157 ESGHLARECT 166
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 18/111 (16%)
Query: 181 QTCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKD 237
+ CYNCG GH+A +C+ + R++ C+ CG +H R C A Q C+ C + GH KD
Sbjct: 66 EACYNCGRGGHIAKDCKEPKREREQCCYNCGKPDHLARDCDHADEQKCYSCGEFGHIQKD 125
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C C +CG++GH +C + EV CY C GHL
Sbjct: 126 C---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 161
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ H+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 83 EPKREREQCCYNCGKPDHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 139
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 140 VAINCS-------KTSEVNCYRCGESGH 160
>gi|400594711|gb|EJP62544.1| cellular nucleic acid-binding protein [Beauveria bassiana ARSEF
2860]
Length = 179
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 65/152 (42%), Gaps = 21/152 (13%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA------QDCFI 227
D P +G CYNCG EGH++ C +K K C+ CG H R+C A +C+
Sbjct: 29 DCPSKGPAKCYNCGNEGHLSRECSEPMKENKSCYKCGQPGHLSRECPTAGGNGQSTECYK 88
Query: 228 CKKGGHRAKDCPDKHKSGFQNA-------QVCLKCGDSGHDMFSCRNSYSLDDLKEVQCY 280
C + GH A+ C G A + C CG GH C N ++CY
Sbjct: 89 CGEMGHIARHCTKSSYGGSYGASYNGGAGKTCYSCGGYGHMSRECVNG--------MRCY 140
Query: 281 ICRCFGHLCCVNISDAVPGEVSCFRCGQLGHT 312
C GH ++ GE C++C Q GH
Sbjct: 141 NCGESGHYSRDCPKESTGGEKICYKCQQSGHV 172
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 73/149 (48%), Gaps = 26/149 (17%)
Query: 176 PDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA----QDCFICKKG 231
P RG CY+CG GH A +C S K C+ CG+ H R+CS+ + C+ C +
Sbjct: 12 PSRG--ACYSCGNSGHQARDCPSKGPAK--CYNCGNEGHLSRECSEPMKENKSCYKCGQP 67
Query: 232 GHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC-RNSY------SLDDLKEVQCYICRC 284
GH +++CP +G + C KCG+ GH C ++SY S + CY C
Sbjct: 68 GHLSRECPTAGGNG--QSTECYKCGEMGHIARHCTKSSYGGSYGASYNGGAGKTCYSCGG 125
Query: 285 FGHLC--CVNISDAVPGEVSCFRCGQLGH 311
+GH+ CVN + C+ CG+ GH
Sbjct: 126 YGHMSRECVN-------GMRCYNCGESGH 147
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Query: 183 CYNCGEEGHMAVNCRSAV-----------KRKKPCFVCGSLEHGVRQCSKAQDCFICKKG 231
CY CGE GH+A +C + K C+ CG H R+C C+ C +
Sbjct: 86 CYKCGEMGHIARHCTKSSYGGSYGASYNGGAGKTCYSCGGYGHMSRECVNGMRCYNCGES 145
Query: 232 GHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
GH ++DCP + G ++C KC SGH +C N
Sbjct: 146 GHYSRDCPKESTGG---EKICYKCQQSGHVQAACPN 178
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 65/140 (46%), Gaps = 24/140 (17%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQ-CYICR 283
C+ C GH+A+DCP K C CG+ GH C + +KE + CY C
Sbjct: 17 CYSCGNSGHQARDCPSK------GPAKCYNCGNEGHLSRECS-----EPMKENKSCYKCG 65
Query: 284 CFGHLCCVNISDAVPGEVS-CFRCGQLGHTGLHWNSCMQACARSRGETVEASPS-----S 337
GHL + G+ + C++CG++GH H S G + AS + +
Sbjct: 66 QPGHLSRECPTAGGNGQSTECYKCGEMGHIARHCTK------SSYGGSYGASYNGGAGKT 119
Query: 338 CYNCGAEGHFARECVSSSKV 357
CY+CG GH +RECV+ +
Sbjct: 120 CYSCGGYGHMSRECVNGMRC 139
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 30/74 (40%), Gaps = 14/74 (18%)
Query: 294 SDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVS 353
S A P +C+ CG GH AR + P+ CYNCG EGH +REC
Sbjct: 8 SAAAPSRGACYSCGNSGHQ-----------AR---DCPSKGPAKCYNCGNEGHLSRECSE 53
Query: 354 SSKVRKRNIDASTP 367
K K P
Sbjct: 54 PMKENKSCYKCGQP 67
>gi|222629337|gb|EEE61469.1| hypothetical protein OsJ_15732 [Oryza sativa Japonica Group]
Length = 403
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 206 CFVCGSLEHGVRQC------SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSG 259
CF+C + +H + C K + C +C++ GH K+CPDK+ + + C CG+SG
Sbjct: 72 CFICKAADHVAKVCPEKSLWEKNKICLLCRQRGHSLKNCPDKNDENLK--KFCYNCGESG 129
Query: 260 HDMFSCRNSYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGHTGLH 315
H + C K C++C+ GHL C N P C CG++ H H
Sbjct: 130 HSLSKCPKPIENGGTKFASCFVCKQQGHLSKNCPENKHGIYPKGGCCKICGEVTHLAKH 188
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 10/97 (10%)
Query: 181 QTCYNCGEEGHMAVNC--RSAVKRKKPCFVCGSLEHGVRQC--------SKAQDCFICKK 230
+ C C + GH NC ++ KK C+ CG H + +C +K CF+CK+
Sbjct: 95 KICLLCRQRGHSLKNCPDKNDENLKKFCYNCGESGHSLSKCPKPIENGGTKFASCFVCKQ 154
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
GH +K+CP+ + C CG+ H C N
Sbjct: 155 QGHLSKNCPENKHGIYPKGGCCKICGEVTHLAKHCPN 191
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 12/71 (16%)
Query: 183 CYNCGEEGHMAVNCRSAVK----RKKPCFVCGSLEHGVRQCS--------KAQDCFICKK 230
CYNCGE GH C ++ + CFVC H + C K C IC +
Sbjct: 122 CYNCGESGHSLSKCPKPIENGGTKFASCFVCKQQGHLSKNCPENKHGIYPKGGCCKICGE 181
Query: 231 GGHRAKDCPDK 241
H AK CP++
Sbjct: 182 VTHLAKHCPNR 192
>gi|240273725|gb|EER37244.1| F-box protein [Ajellomyces capsulatus H143]
gi|325094843|gb|EGC48153.1| F-box domain-containing protein [Ajellomyces capsulatus H88]
Length = 857
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 25/108 (23%)
Query: 181 QTCYNCGEEGHMAVNC---------------------RSAVKRKKPCFVCGSLEHGVRQC 219
Q CY CG+ GH+A NC R++ C+ CG H R C
Sbjct: 754 QECYKCGQVGHIARNCSQSGGYGSGGYGGATGGGYSGGYGGGRQQTCYSCGGYGHMARDC 813
Query: 220 SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
++ Q C+ C + GH ++DCP + K +VC KC GH +C N
Sbjct: 814 TQGQKCYNCGEVGHVSRDCPTEAK----GERVCYKCKQPGHVQATCPN 857
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 53/150 (35%), Gaps = 54/150 (36%)
Query: 181 QTCYNCGEEGHMAVNCRSA-----------------VKRKKPCFVCGSLEHGVRQCS--- 220
+TCY CG+ GH++ +C SA + C+ CG + H R CS
Sbjct: 714 KTCYRCGQAGHISRDCTSAGSGDSYGNSGGYSGGGGAAGGQECYKCGQVGHIARNCSQSG 773
Query: 221 ----------------------KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDS 258
+ Q C+ C GH A+DC Q C CG+
Sbjct: 774 GYGSGGYGGATGGGYSGGYGGGRQQTCYSCGGYGHMARDC--------TQGQKCYNCGEV 825
Query: 259 GHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
GH C + E CY C+ GH+
Sbjct: 826 GHVSRDCPT----EAKGERVCYKCKQPGHV 851
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 60/169 (35%), Gaps = 52/169 (30%)
Query: 217 RQCSKA---QDCFICKKGGHRAKDCPD-------------KHKSGFQNAQVCLKCGDSGH 260
R+C+ A + C+ C + GH ++DC G Q C KCG GH
Sbjct: 705 RECTAAPKEKTCYRCGQAGHISRDCTSAGSGDSYGNSGGYSGGGGAAGGQECYKCGQVGH 764
Query: 261 DMFSCRN-----------------SYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSC 303
+C S ++ CY C +GH+ D G+ C
Sbjct: 765 IARNCSQSGGYGSGGYGGATGGGYSGGYGGGRQQTCYSCGGYGHMA----RDCTQGQ-KC 819
Query: 304 FRCGQLGHTGLHWNSCMQAC-ARSRGETVEASPSSCYNCGAEGHFAREC 351
+ CG++GH + C ++GE V CY C GH C
Sbjct: 820 YNCGEVGHVS-------RDCPTEAKGERV------CYKCKQPGHVQATC 855
>gi|294874952|ref|XP_002767169.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239868618|gb|EEQ99886.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 141
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK--AQDCFICKKGG 232
P R CYNCG+ H+A +C + ++PCF CG + H R C++ + CF C + G
Sbjct: 39 PTGRRPMNCYNCGKPDHLARDCPNEQTNQRPCFKCGKVGHFARDCTEPDTRACFRCGETG 98
Query: 233 HRAKDCP--------DKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
H A+DCP ++ G + C KCG GH C N
Sbjct: 99 HLARDCPNEDTRPESERAPRGRSEGRNCFKCGKPGHLARDCPN 141
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 182 TCYNCGEEGHMAVNC------RSAVKRKKPCFVCGSLEHGVRQCSKAQ----DCFICKKG 231
TC+ C E GH A +C R +R C+ CG +H R C Q CF C K
Sbjct: 17 TCFICNEPGHFARDCPQASSSRPTGRRPMNCYNCGKPDHLARDCPNEQTNQRPCFKCGKV 76
Query: 232 GHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
GH A+DC + + + C +CG++GH C N
Sbjct: 77 GHFARDCTEP------DTRACFRCGETGHLARDCPN 106
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 53/133 (39%), Gaps = 17/133 (12%)
Query: 225 CFICKKGGHRAKDCPDKHKS--GFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYIC 282
CFIC + GH A+DCP S + C CG H C N + + C+ C
Sbjct: 18 CFICNEPGHFARDCPQASSSRPTGRRPMNCYNCGKPDHLARDCPN----EQTNQRPCFKC 73
Query: 283 RCFGHLCCVNISDAV-PGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPS---SC 338
GH D P +CFRCG+ GH C R E S +C
Sbjct: 74 GKVGHF----ARDCTEPDTRACFRCGETGHLA---RDCPNEDTRPESERAPRGRSEGRNC 126
Query: 339 YNCGAEGHFAREC 351
+ CG GH AR+C
Sbjct: 127 FKCGKPGHLARDC 139
>gi|449266322|gb|EMC77386.1| Cellular nucleic acid-binding protein [Columba livia]
Length = 181
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 67/148 (45%), Gaps = 30/148 (20%)
Query: 206 CFVCGSLEHGVRQCSKAQD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFS 264
C+ CG H + C +D C+ C +GGH AKDC + + + Q C CG GH
Sbjct: 58 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARD 114
Query: 265 CRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACA 324
C D E +CY C FGH+ D +V C+RCG+ GH ++ +
Sbjct: 115 C------DHADEQKCYSCGEFGHI----QKDCT--KVKCYRCGETGHVAINCS------- 155
Query: 325 RSRGETVEASPSSCYNCGAEGHFARECV 352
+ S +CY CG GH AREC
Sbjct: 156 -------KTSEVNCYRCGESGHLARECT 176
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KDC
Sbjct: 77 ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDC 136
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CG++GH +C + EV CY C GHL
Sbjct: 137 ---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 171
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 11/81 (13%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH A +C
Sbjct: 100 QCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCS- 155
Query: 241 KHKSGFQNAQV-CLKCGDSGH 260
+ ++V C +CG+SGH
Sbjct: 156 ------KTSEVNCYRCGESGH 170
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 66/184 (35%), Gaps = 74/184 (40%)
Query: 222 AQDCFICKKGGHRAKDCPDK--------------------HKSGFQNAQ-----VCLKCG 256
+ +CF C + GH A++CP ++GFQ +C +CG
Sbjct: 3 SNECFKCGRTGHWARECPTGIGRGRGMRSRGRAFFFSCYPFQAGFQFMSSSLPDICYRCG 62
Query: 257 DSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL-------------CCVNISDAVPGEVS- 302
+SGH C DL+E CY C GH+ CC N PG ++
Sbjct: 63 ESGHLAKDC-------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGK--PGHLAR 113
Query: 303 ---------CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVS 353
C+ CG+ GH + + CY CG GH A C
Sbjct: 114 DCDHADEQKCYSCGEFGHI-----------------QKDCTKVKCYRCGETGHVAINCSK 156
Query: 354 SSKV 357
+S+V
Sbjct: 157 TSEV 160
>gi|242076730|ref|XP_002448301.1| hypothetical protein SORBIDRAFT_06g024880 [Sorghum bicolor]
gi|241939484|gb|EES12629.1| hypothetical protein SORBIDRAFT_06g024880 [Sorghum bicolor]
Length = 275
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 11/119 (9%)
Query: 206 CFVCGSLEHGVRQCS------KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSG 259
CF+C S +H + C K + C +C++ GH K+CPDK + + + C CG+SG
Sbjct: 70 CFICKSTDHVAKACPEKALWDKNKICLLCRERGHSLKNCPDKSEGNLK--KFCYNCGESG 127
Query: 260 HDMFSCRNSYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGHTGLH 315
H + C C+IC+ GHL C N P C CG++ H H
Sbjct: 128 HSLSKCPKPIENGGTNFASCFICKQQGHLSKNCPENKHGIYPKGGCCKECGEVTHLARH 186
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 181 QTCYNCGEEGHMAVNC--RSAVKRKKPCFVCGSLEHGVRQCSKAQD--------CFICKK 230
+ C C E GH NC +S KK C+ CG H + +C K + CFICK+
Sbjct: 93 KICLLCRERGHSLKNCPDKSEGNLKKFCYNCGESGHSLSKCPKPIENGGTNFASCFICKQ 152
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDL 274
GH +K+CP+ + C +CG+ H C N D +
Sbjct: 153 QGHLSKNCPENKHGIYPKGGCCKECGEVTHLARHCPNKGKQDLI 196
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 36/130 (27%)
Query: 222 AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYI 281
+ CFICK H AK CP+K + + ++CL C + GH + +C + S +LK+
Sbjct: 67 GERCFICKSTDHVAKACPEK--ALWDKNKICLLCRERGHSLKNCPDK-SEGNLKKF---- 119
Query: 282 CRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNC 341
C+ CG+ GH+ + C + E + +SC+ C
Sbjct: 120 ---------------------CYNCGESGHS-------LSKCPKPI-ENGGTNFASCFIC 150
Query: 342 GAEGHFAREC 351
+GH ++ C
Sbjct: 151 KQQGHLSKNC 160
>gi|401420040|ref|XP_003874509.1| putative poly-zinc finger protein 2 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490745|emb|CBZ26009.1| putative poly-zinc finger protein 2 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 135
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 59/138 (42%), Gaps = 18/138 (13%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
CY CG GH + C SA PCF CG H ++C ++ CF C+K GHRA
Sbjct: 1 MVCYRCGGVGHQSRECTSAAD-SAPCFRCGKPGHVAKECVSTITAEEAPCFYCQKPGHRA 59
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL--CCVNI 293
+DCPD +C C GH C N CY+C GH+ C
Sbjct: 60 RDCPDAPPK--SETVMCYNCSQKGHIASECPNP--------AHCYLCNEDGHIGRSCPTA 109
Query: 294 SDAVPGEVSCFRCGQLGH 311
E SC +CG+ GH
Sbjct: 110 PKRSVAEKSCRKCGKKGH 127
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 56/156 (35%), Gaps = 52/156 (33%)
Query: 206 CFVCGSLEHGVRQCSKAQD---CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDM 262
C+ CG + H R+C+ A D CF C K GH AK+C
Sbjct: 3 CYRCGGVGHQSRECTSAADSAPCFRCGKPGHVAKEC------------------------ 38
Query: 263 FSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGE--VSCFRCGQLGHTGLHWNSCM 320
S +E C+ C+ GH + DA P V C+ C Q GH
Sbjct: 39 ------VSTITAEEAPCFYCQKPGHRA-RDCPDAPPKSETVMCYNCSQKGHIASEC---- 87
Query: 321 QACARSRGETVEASPSSCYNCGAEGHFARECVSSSK 356
+P+ CY C +GH R C ++ K
Sbjct: 88 ------------PNPAHCYLCNEDGHIGRSCPTAPK 111
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 15/102 (14%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQT----CYNCGEEGHMAVNCRSAVKRKKP 205
E V+T+ + G R D PD ++ CYNC ++GH+A C +
Sbjct: 37 ECVSTITAEEAPCFYCQKPGHRARDCPDAPPKSETVMCYNCSQKGHIASECPNPAH---- 92
Query: 206 CFVCGSLEHGVRQCSKA-------QDCFICKKGGHRAKDCPD 240
C++C H R C A + C C K GH KDCP+
Sbjct: 93 CYLCNEDGHIGRSCPTAPKRSVAEKSCRKCGKKGHLRKDCPE 134
>gi|98986202|dbj|BAE94497.1| Vasa [Polyandrocarpa misakiensis]
Length = 705
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 50/171 (29%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
++C+ CG+EGHM+ +C S G ++A+ CF C + GH ++DCP
Sbjct: 69 RSCFKCGQEGHMSRDCTS----------------GASGDTQAKKCFKCGEEGHMSRDCPS 112
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGE 300
+G +++ C KCG+ GH C N+ + +
Sbjct: 113 NTSTG--SSKACFKCGEEGHMSRECPNNNNNN---------------------------S 143
Query: 301 VSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
+CF+CG+ GH + S + S +C+ CG EGH +REC
Sbjct: 144 KACFKCGEEGHMSRECPN-----NNSSKDGFGTSSRACFKCGEEGHMSREC 189
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 53/132 (40%), Gaps = 38/132 (28%)
Query: 220 SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQC 279
++ + CF C + GH ++DC SG A+ C KCG+ GH C ++ S K
Sbjct: 66 ARNRSCFKCGQEGHMSRDC-TSGASGDTQAKKCFKCGEEGHMSRDCPSNTSTGSSK---- 120
Query: 280 YICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCY 339
+CF+CG+ GH +R + +C+
Sbjct: 121 ----------------------ACFKCGEEGHM-----------SRECPNNNNNNSKACF 147
Query: 340 NCGAEGHFAREC 351
CG EGH +REC
Sbjct: 148 KCGEEGHMSREC 159
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 181 QTCYNCGEEGHMAVNC-RSAVKRKKPCFVCGSLEHGVRQC-----------SKAQDCFIC 228
+ C+ CGEEGHM+ C + K CF CG H R+C + ++ CF C
Sbjct: 120 KACFKCGEEGHMSRECPNNNNNNSKACFKCGEEGHMSRECPNNNSSKDGFGTSSRACFKC 179
Query: 229 KKGGHRAKDCP 239
+ GH +++CP
Sbjct: 180 GEEGHMSRECP 190
>gi|109131255|ref|XP_001096279.1| PREDICTED: zinc finger CCHC domain-containing protein 13-like
[Macaca mulatta]
gi|355757474|gb|EHH60999.1| Zinc finger CCHC domain-containing protein 13 [Macaca fascicularis]
Length = 170
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 74/174 (42%), Gaps = 51/174 (29%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
TCY CGE GH A NC + G++ C+ C + GH AKDC +
Sbjct: 46 TCYRCGEFGHHAKNC----------VLLGNI------------CYNCGRSGHIAKDCKEP 83
Query: 242 HKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEV 301
+ + Q C CG GH C D KE +CY C GH+ +V
Sbjct: 84 KR---ERDQHCYTCGRLGHLACDC------DHQKEQKCYSCGKLGHI------QKDCAQV 128
Query: 302 SCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSS 355
C+RCG+ GH ++ + +AS +CY CG GH AREC S +
Sbjct: 129 KCYRCGETGHVAINCS--------------KASQVNCYRCGESGHLARECPSEA 168
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 11/81 (13%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
Q CY CG GH+A +C ++++ C+ CG L H + C++ + C+ C + GH A +C
Sbjct: 89 QHCYTCGRLGHLACDCDH--QKEQKCYSCGKLGHIQKDCAQVK-CYRCGETGHVAINCS- 144
Query: 241 KHKSGFQNAQV-CLKCGDSGH 260
+ +QV C +CG+SGH
Sbjct: 145 ------KASQVNCYRCGESGH 159
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 54/133 (40%), Gaps = 30/133 (22%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
C+ C + GH AK+C +C CG SGH C+ ++ CY C
Sbjct: 47 CYRCGEFGHHAKNC-------VLLGNICYNCGRSGHIAKDCKEP---KRERDQHCYTCGR 96
Query: 285 FGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAE 344
GHL C E C+ CG+LGH + CA+ + CY CG
Sbjct: 97 LGHLACDCDHQK---EQKCYSCGKLGHI-------QKDCAQVK----------CYRCGET 136
Query: 345 GHFARECVSSSKV 357
GH A C +S+V
Sbjct: 137 GHVAINCSKASQV 149
>gi|363747942|ref|XP_003644189.1| hypothetical protein Ecym_1118 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887821|gb|AET37372.1| hypothetical protein Ecym_1118 [Eremothecium cymbalariae
DBVPG#7215]
Length = 162
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 73/172 (42%), Gaps = 40/172 (23%)
Query: 183 CYNCGEEGHMAVNC---RSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCP 239
CYNC + GH+ C RSA K C+ CG H +C+ Q CF C + GH +KDCP
Sbjct: 25 CYNCNQPGHIQSECTLPRSA--EHKQCYNCGETGHVRGECN-IQKCFNCNQAGHISKDCP 81
Query: 240 DKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPG 299
+ +S F + R S+S K V CY C H+ D +
Sbjct: 82 EPRRSRFSTS----------------RASFSTKSSK-VSCYRCGGPNHM----AKDCLQD 120
Query: 300 EVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
E C+ CG+ GH SR S +CYNC GH +R+C
Sbjct: 121 ETKCYSCGKSGHI-------------SRDCPSGPSEKTCYNCNEPGHISRDC 159
>gi|55925630|ref|NP_083434.1| zinc finger CCHC domain-containing protein 13 [Mus musculus]
gi|12854262|dbj|BAB29977.1| unnamed protein product [Mus musculus]
gi|21425582|emb|CAD33940.1| cellular nucleic acid binding-like protein [Mus musculus]
gi|148682147|gb|EDL14094.1| cellular nucleic acid binding protein 2 [Mus musculus]
gi|148877851|gb|AAI45773.1| Zinc finger, CCHC domain containing 13 [Mus musculus]
gi|148878274|gb|AAI45775.1| Zinc finger, CCHC domain containing 13 [Mus musculus]
Length = 170
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 77/190 (40%), Gaps = 48/190 (25%)
Query: 181 QTCYNCGEEGHMAVNCR------------------SAVKRKKPCFVCGSLEHGVRQCSKA 222
++C+ CG GH A C S + C+ CG H + C
Sbjct: 4 KSCFKCGHSGHWARECPKGGTRGRTARGRTRGPQCSTANQSDVCYRCGETGHYAKDCDLL 63
Query: 223 QD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYI 281
QD C+ C + GH AKDC + + Q C C GH C + +E +CY
Sbjct: 64 QDTCYNCGRRGHIAKDCTQAKR---EREQCCYICSQPGHLARDC------NRQEEQKCYT 114
Query: 282 CRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNC 341
C FGH+ D ++ C+RCG+ GH ++ + + S SCY C
Sbjct: 115 CGEFGHI----QKDCT--QIKCYRCGENGHMAVNCS--------------KTSEVSCYRC 154
Query: 342 GAEGHFAREC 351
G GH AREC
Sbjct: 155 GESGHLAREC 164
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 7/61 (11%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD--CFICKKGGHRAKDC 238
Q CY CGE GH+ +C + +K C+ CG H CSK + C+ C + GH A++C
Sbjct: 110 QKCYTCGEFGHIQKDC-TQIK----CYRCGENGHMAVNCSKTSEVSCYRCGESGHLAREC 164
Query: 239 P 239
P
Sbjct: 165 P 165
>gi|85095325|ref|XP_960060.1| hypothetical protein NCU05800 [Neurospora crassa OR74A]
gi|28921519|gb|EAA30824.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 225
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 85/217 (39%), Gaps = 44/217 (20%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
+ CY CGE GH A C S + C+ C H +C ++A+ C+ C+ GH
Sbjct: 7 RACYKCGELGHHAEACSSPHRL---CYNCKQPNHESSECPLPRSTEAKQCYHCQGLGHVQ 63
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYS---------------------LDDL 274
DCP SG + C CG GH M +C N +
Sbjct: 64 ADCPTLRISGAGSTSRCYNCGQPGHYMRACPNPPTGIPRGAPVGRGGFGGFGRGGFAGGA 123
Query: 275 KEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEAS 334
+ CY C H D + C+ CG+LGH + C G + +
Sbjct: 124 RPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHIS-------RDCTAPNGGPLNTA 172
Query: 335 PSSCYNCGAEGHFARECV----SSSKVRKRNIDASTP 367
+CY C GH +R+C ++ ++++ +++A P
Sbjct: 173 GKTCYQCSETGHISRDCPNKPHTNGEIKQDDLNAGHP 209
>gi|156082886|ref|XP_001608927.1| zinc knuckle domain containing protein [Babesia bovis T2Bo]
gi|154796177|gb|EDO05359.1| zinc knuckle domain containing protein [Babesia bovis]
Length = 200
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Query: 176 PDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD-------CFIC 228
P R +TC+ C + GH C +A CF CGS +H +R C + CFIC
Sbjct: 97 PKRVRKTCFKCRKRGHTLRECSAA--EVGICFRCGSTDHILRDCQDPDNGTLPFTSCFIC 154
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
KK GH A CPD K + N C CG H C
Sbjct: 155 KKNGHIASQCPDNDKGIYPNGGCCFFCGSVTHLKAMC 191
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Query: 223 QDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYIC 282
+ CF C+K GH ++C +C +CG + H + C++ + L C+IC
Sbjct: 102 KTCFKCRKRGHTLREC------SAAEVGICFRCGSTDHILRDCQDPDN-GTLPFTSCFIC 154
Query: 283 RCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+ GH+ C N P CF CG + H
Sbjct: 155 KKNGHIASQCPDNDKGIYPNGGCCFFCGSVTH 186
>gi|281200716|gb|EFA74934.1| hypothetical protein PPL_11968 [Polysphondylium pallidum PN500]
Length = 254
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 77/199 (38%), Gaps = 52/199 (26%)
Query: 177 DRGWQTCYNCGEEGHMAVNC---RSAVKRKKPCFVCGSLEHGVRQCSKAQD--------- 224
DRG C+NCG+ GH++ C + C+ CG+ H R+C +
Sbjct: 59 DRGGNNCFNCGKPGHISRECPDGAAGAGNTGSCYNCGNTGHISRECPNKSERNDRSGGDR 118
Query: 225 -CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICR 283
CF C K GH ++DC S C KCG +GH C S D
Sbjct: 119 ACFNCGKTGHMSRDCTQGGSS-----AGCFKCGKTGHISRDCTESGGSDR---------- 163
Query: 284 CFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGA 343
GH G+ CF+C Q GH + C S ++ SC+NCG
Sbjct: 164 --GHG----------GDKKCFKCNQTGHI-------SRDCPNS-----DSQGPSCFNCGE 199
Query: 344 EGHFARECVSSSKVRKRNI 362
GH +REC S +N
Sbjct: 200 SGHKSRECTKSKNDNNKNA 218
>gi|115459840|ref|NP_001053520.1| Os04g0555800 [Oryza sativa Japonica Group]
gi|38345588|emb|CAD41641.2| OSJNBb0012E24.6 [Oryza sativa Japonica Group]
gi|113565091|dbj|BAF15434.1| Os04g0555800 [Oryza sativa Japonica Group]
Length = 277
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 206 CFVCGSLEHGVRQCS------KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSG 259
CF+C + +H + C K + C +C++ GH K+CPDK+ + + C CG+SG
Sbjct: 72 CFICKAADHVAKVCPEKSLWEKNKICLLCRQRGHSLKNCPDKNDENLK--KFCYNCGESG 129
Query: 260 HDMFSCRNSYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGHTGLH 315
H + C K C++C+ GHL C N P C CG++ H H
Sbjct: 130 HSLSKCPKPIENGGTKFASCFVCKQQGHLSKNCPENKHGIYPKGGCCKICGEVTHLAKH 188
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 10/97 (10%)
Query: 181 QTCYNCGEEGHMAVNC--RSAVKRKKPCFVCGSLEHGVRQC--------SKAQDCFICKK 230
+ C C + GH NC ++ KK C+ CG H + +C +K CF+CK+
Sbjct: 95 KICLLCRQRGHSLKNCPDKNDENLKKFCYNCGESGHSLSKCPKPIENGGTKFASCFVCKQ 154
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
GH +K+CP+ + C CG+ H C N
Sbjct: 155 QGHLSKNCPENKHGIYPKGGCCKICGEVTHLAKHCPN 191
>gi|452819791|gb|EME26843.1| cellular nucleic acid-binding protein [Galdieria sulphuraria]
Length = 301
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 35/230 (15%)
Query: 93 PSGTTDDVIIEDVKSSDKKRI---RVRKKKKKEADKIEIED------QSVIVRKEEQKVE 143
P G+ D+ + V S+ + R R +K+ ++ K E +V + ++E K E
Sbjct: 13 PPGSPDEELSHLVTHSETTKADSPRKRSQKRHKSSKALPESGPNSGPTTVTLEEKESKDE 72
Query: 144 TADNGDEGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRK 203
+ E ++ RYF + C NCG GH +V C V +
Sbjct: 73 ASTFFSEEQASLHAESQA---------RYFSESN---VVCSNCGLAGHFSVFCPEEVVGR 120
Query: 204 KPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMF 263
+ CF+CG H R CS+ + C C + GH+ K+C + + + + +
Sbjct: 121 R-CFLCGGEGHLARNCSE-ELCHNCLRPGHKRKNCTLPRRDWRREEK-------HAYPKY 171
Query: 264 SCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTG 313
L ++K+++CYIC GHL C +SC+ CGQ GH+G
Sbjct: 172 E-----DLKNVKKLKCYICGKTGHLDCSFEKMKFCKSISCYNCGQSGHSG 216
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 44/117 (37%), Gaps = 31/117 (26%)
Query: 173 FDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCS------------ 220
F P + + C+ CG EGH+A NC + C C H + C+
Sbjct: 112 FCPEEVVGRRCFLCGGEGHLARNCSEEL-----CHNCLRPGHKRKNCTLPRRDWRREEKH 166
Query: 221 -----------KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCR 266
K C+IC K GH DC K F + C CG SGH SCR
Sbjct: 167 AYPKYEDLKNVKKLKCYICGKTGHL--DC-SFEKMKFCKSISCYNCGQSGHSGGSCR 220
>gi|378730825|gb|EHY57284.1| cellular nucleic acid-binding protein [Exophiala dermatitidis
NIH/UT8656]
Length = 231
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 78/199 (39%), Gaps = 39/199 (19%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
+ CY CG GH A C S+ ++ C+ C H QC ++ + C+ C+ GH
Sbjct: 7 RACYKCGNVGHYAEVCTSS---ERLCYNCKQPGHESNQCPLPRTTETKQCYHCQGLGHVQ 63
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN--------------------SYSLDDLK 275
DCP SG C CG GH +C YS+ + +
Sbjct: 64 ADCPTLRISGGPAGGRCYSCGQIGHLARNCPTPSAAPAPRGGRGGYGSGFRGGYSVVNNR 123
Query: 276 EVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASP 335
CY C H D + C+ CG+LGH + C G + A+
Sbjct: 124 AATCYKCGGPNHY----ARDCQAQAMKCYACGKLGHI-------SRDCTAPNGGPLNAAG 172
Query: 336 SSCYNCGAEGHFARECVSS 354
+CY CG GH +++C ++
Sbjct: 173 KTCYKCGQPGHISKDCTTA 191
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 12/73 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK---------AQDCFICKKGG 232
TCY CG H A +C++ + C+ CG L H R C+ + C+ C + G
Sbjct: 126 TCYKCGGPNHYARDCQAQAMK---CYACGKLGHISRDCTAPNGGPLNAAGKTCYKCGQPG 182
Query: 233 HRAKDCPDKHKSG 245
H +KDC +G
Sbjct: 183 HISKDCTTAETNG 195
>gi|385301300|gb|EIF45501.1| zinc knuckle domain protein [Dekkera bruxellensis AWRI1499]
Length = 189
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 34/177 (19%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
+TCY CG GH A +C + ++ C+ C S +H + C + + CF C K GH
Sbjct: 6 RTCYKCGLTGHKAEDC---PQTQRLCYNCRSPDHEAKDCPLPKQTNTKQCFNCGKIGHIR 62
Query: 236 KDCPDKHKSGFQNAQV-CLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNIS 294
+CP+ + QV C CG GH ++ Y+ +++ CY C F HL
Sbjct: 63 SECPEP-----PHRQVKCYNCGKFGHVA---KDCYAEKRSEKIVCYNCGGFNHL----AK 110
Query: 295 DAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
D V C+ CG+ GH +S +S+ + C+ CG EGH AR C
Sbjct: 111 DCRADPVKCYNCGETGHLAKFCHS------KSKAKV-------CFKCGEEGHLARFC 154
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 66/154 (42%), Gaps = 23/154 (14%)
Query: 206 CFVCGSLEHGVRQCSKAQD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFS 264
C+ CG H C + Q C+ C+ H AKDCP ++ N + C CG GH
Sbjct: 8 CYKCGLTGHKAEDCPQTQRLCYNCRSPDHEAKDCPLPKQT---NTKQCFNCGKIGHI--- 61
Query: 265 CRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACA 324
R+ ++V+CY C FGH+ ++ ++ C+ CG H
Sbjct: 62 -RSECPEPPHRQVKCYNCGKFGHVAKDCYAEKRSEKIVCYNCGGFNHLA----------- 109
Query: 325 RSRGETVEASPSSCYNCGAEGHFARECVSSSKVR 358
+ A P CYNCG GH A+ C S SK +
Sbjct: 110 ----KDCRADPVKCYNCGETGHLAKFCHSKSKAK 139
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICK 229
P + C+NCG+ GH+ C R+ C+ CG H + C S+ C+ C
Sbjct: 44 PKQTNTKQCFNCGKIGHIRSECPEPPHRQVKCYNCGKFGHVAKDCYAEKRSEKIVCYNCG 103
Query: 230 KGGHRAKDC---PDK--------HKSGF----QNAQVCLKCGDSGH 260
H AKDC P K H + F A+VC KCG+ GH
Sbjct: 104 GFNHLAKDCRADPVKCYNCGETGHLAKFCHSKSKAKVCFKCGEEGH 149
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 182 TCYNCGEEGHMAVNCRS-AVKRKKPCFVCGSLEHGVRQC---SKAQDCFICKKGGHRAKD 237
CYNCG H+A +CR+ VK C+ CG H + C SKA+ CF C + GH A+
Sbjct: 98 VCYNCGGFNHLAKDCRADPVK----CYNCGETGHLAKFCHSKSKAKVCFKCGEEGHLARF 153
Query: 238 CP 239
CP
Sbjct: 154 CP 155
>gi|148666814|gb|EDK99230.1| cellular nucleic acid binding protein, isoform CRA_c [Mus musculus]
Length = 149
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 60/133 (45%), Gaps = 29/133 (21%)
Query: 219 CSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQ 278
C + C+ C +GGH AKDC + + + Q C CG GH C D E +
Sbjct: 40 CRRMVTCYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQK 90
Query: 279 CYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSC 338
CY C FGH+ D +V C+RCG+ GH ++ + + S +C
Sbjct: 91 CYSCGEFGHI----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNC 130
Query: 339 YNCGAEGHFAREC 351
Y CG GH AREC
Sbjct: 131 YRCGESGHLAREC 143
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 55/114 (48%), Gaps = 18/114 (15%)
Query: 178 RGWQTCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHR 234
R TCYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH
Sbjct: 41 RRMVTCYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHI 100
Query: 235 AKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
KDC C +CG++GH +C + EV CY C GHL
Sbjct: 101 QKDCTKVK---------CYRCGETGHVAINCSKT------SEVNCYRCGESGHL 139
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 61 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 117
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
A +C + C +CG+SGH C
Sbjct: 118 VAINCSKTSEVN------CYRCGESGHLAREC 143
>gi|297836502|ref|XP_002886133.1| hypothetical protein ARALYDRAFT_480687 [Arabidopsis lyrata subsp.
lyrata]
gi|297331973|gb|EFH62392.1| hypothetical protein ARALYDRAFT_480687 [Arabidopsis lyrata subsp.
lyrata]
Length = 299
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 79/207 (38%), Gaps = 37/207 (17%)
Query: 182 TCYNCGEEGHMAVNC-------------RSAVKRKKPCFVCGSLEHGVRQCSKAQD---- 224
+C+NCGE GHMA +C + C+VCG + H R C ++
Sbjct: 93 SCFNCGEVGHMAKDCDGGGGGRSYGGGGGRRSGGEGTCYVCGDVGHFARDCRQSGGGNSG 152
Query: 225 -------CFICKKGGHRAKDCPDKHKSGFQNAQV-------CLKCGDSGHDMFSCRNSYS 270
C+ C + GH AKDC C CG GH CR +
Sbjct: 153 GGGGGGPCYSCGEVGHLAKDCRGGSGGNRYGGGGRGSGSDGCYLCGGVGHFARDCRQNGG 212
Query: 271 LDDLKEV----QCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARS 326
+ CY C GH+ V S P +C+ CG+ GH + + +
Sbjct: 213 GNVGGGGGGGNTCYTCGGVGHIARVCTSKR-PSGGACYECGETGHLARDCDR-RGSGSSG 270
Query: 327 RGETVEASPSSCYNCGAEGHFARECVS 353
G C+NCG EGHFAREC S
Sbjct: 271 GGGGGGGGSGKCFNCGKEGHFARECSS 297
>gi|71398909|ref|XP_802672.1| poly-zinc finger protein 2 [Trypanosoma cruzi strain CL Brener]
gi|70864476|gb|EAN81226.1| poly-zinc finger protein 2, putative [Trypanosoma cruzi]
Length = 192
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 83/204 (40%), Gaps = 41/204 (20%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCS-----KAQDCFICKKGGHRA 235
CY CG GH + +C V CF CG H + C+ K CF C++ GHRA
Sbjct: 1 MVCYRCGGVGHTSRDCSRPVNESL-CFRCGKPGHMSKDCASDIDVKNAPCFFCQQAGHRA 59
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNS-----------------YS---LDDLK 275
+CP + + Q C +CG+ GH C N Y+ + ++
Sbjct: 60 NNCP---LAPPEARQPCYRCGEEGHISRDCTNPRLPRSEQSCFHCHKTGHYARECPEVIE 116
Query: 276 EVQCYICRCFGHLC--CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEA 333
++C C GH+ C A CFRCG GH + C +R +
Sbjct: 117 NLKCNSCGVTGHIARRCPERIRAARAFYPCFRCGMQGHVA-------RNCPNTR---LPY 166
Query: 334 SPSSCYNCGAEGHFARECVSSSKV 357
CY CG +GH AR+C S + +
Sbjct: 167 EGQLCYVCGEKGHLARDCKSEAPL 190
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 176 PDRGWQTCYNCGEEGHMAVNCRSA--VKRKKPCFVCGSLEHGVRQCSKAQD---CFICKK 230
P Q CY CGEEGH++ +C + + ++ CF C H R+C + + C C
Sbjct: 66 PPEARQPCYRCGEEGHISRDCTNPRLPRSEQSCFHCHKTGHYARECPEVIENLKCNSCGV 125
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
GH A+ CP++ ++ + C +CG GH +C N+ + CY+C GHL
Sbjct: 126 TGHIARRCPERIRAA-RAFYPCFRCGMQGHVARNCPNTRL--PYEGQLCYVCGEKGHL 180
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 178 RGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK-------AQDCFICKK 230
R Q+C++C + GH A C ++ K C CG H R+C + CF C
Sbjct: 93 RSEQSCFHCHKTGHYARECPEVIENLK-CNSCGVTGHIARRCPERIRAARAFYPCFRCGM 151
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSL 271
GH A++CP+ Q+C CG+ GH C++ L
Sbjct: 152 QGHVARNCPNTRLP--YEGQLCYVCGEKGHLARDCKSEAPL 190
>gi|357606571|gb|EHJ65114.1| putative zinc finger protein [Danaus plexippus]
Length = 420
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 221 KAQDCFICKKGGHRAKDCPD--KHKSGFQNAQ-VCLKCGDSGHDMFSCRNSYSLDDLKEV 277
K + C+ C+KGGH DCPD H G +A+ VC KCG + H F C+ + +
Sbjct: 275 KREVCYNCRKGGHNLSDCPDLKSHIPGVDSAEGVCFKCGSTEHRQFECKVQKD-KEFRFA 333
Query: 278 QCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
C+ICR GH+ C N P SC CG + H
Sbjct: 334 TCFICREPGHIARQCPDNPKGLYPNGGSCKLCGDVTH 370
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 16/95 (16%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKP--------CFVCGSLEHGVRQCSKAQD-------C 225
+ CYNC + GH +C +K P CF CGS EH +C +D C
Sbjct: 277 EVCYNCRKGGHNLSDC-PDLKSHIPGVDSAEGVCFKCGSTEHRQFECKVQKDKEFRFATC 335
Query: 226 FICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
FIC++ GH A+ CPD K + N C CGD H
Sbjct: 336 FICREPGHIARQCPDNPKGLYPNGGSCKLCGDVTH 370
Score = 38.1 bits (87), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 15/97 (15%)
Query: 266 RNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVPG----EVSCFRCGQLGHTGLHWNSC 319
R +L +K CY CR GH C ++ +PG E CF+CG H
Sbjct: 266 RAEKALARVKREVCYNCRKGGHNLSDCPDLKSHIPGVDSAEGVCFKCGSTEHRQFE---- 321
Query: 320 MQACARSRGETVEASPSSCYNCGAEGHFARECVSSSK 356
C + + E ++C+ C GH AR+C + K
Sbjct: 322 ---CKVQKDK--EFRFATCFICREPGHIARQCPDNPK 353
>gi|346320729|gb|EGX90329.1| zinc knuckle domain containing protein [Cordyceps militaris CM01]
Length = 296
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 76/208 (36%), Gaps = 45/208 (21%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
+ CY CG GH A C S+ ++ C+ C H C ++A+ C+ C+ GH
Sbjct: 7 RACYKCGNVGHYAEVCSSS---ERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQ 63
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDL--------------------- 274
DCP +G + C CG GH +C N +
Sbjct: 64 ADCPTLRLTGNATSGRCYNCGQPGHLARACPNPVGPAAMGRGAPMGRGGYAGGNFGGRGG 123
Query: 275 -----KEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGE 329
+ CY C H D + C+ CG+LGH + C G
Sbjct: 124 FAGGPRPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHIS-------RDCTAPNGG 172
Query: 330 TVEASPSSCYNCGAEGHFARECVSSSKV 357
+ + +CY CG GH +R+C + V
Sbjct: 173 PLNTAGKTCYQCGEAGHISRDCPQKAAV 200
>gi|118401479|ref|XP_001033060.1| Zinc knuckle family protein [Tetrahymena thermophila]
gi|89287406|gb|EAR85397.1| Zinc knuckle family protein [Tetrahymena thermophila SB210]
Length = 352
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 10/93 (10%)
Query: 183 CYNCGEEGHMAVNC---RSAVKRKKPCFVCGSLEHGVRQCSKAQD-------CFICKKGG 232
C C E GH+ +C +S+ ++ C+ CGS EH ++ C K + CF+C+K G
Sbjct: 216 CLGCREVGHLVADCPNAKSSKAKQNICYNCGSNEHTLKDCKKKKTGALKFAFCFVCQKQG 275
Query: 233 HRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
H ++DCP+ K + C CGD H +C
Sbjct: 276 HISRDCPENDKGLYYKGGGCFICGDVHHTQANC 308
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
C C++ GH DCP+ KS +C CG + H + C+ + LK C++C+
Sbjct: 216 CLGCREVGHLVADCPNA-KSSKAKQNICYNCGSNEHTLKDCKKKKT-GALKFAFCFVCQK 273
Query: 285 FGHL---CCVNISDAVPGEVSCFRCGQLGHT 312
GH+ C N CF CG + HT
Sbjct: 274 QGHISRDCPENDKGLYYKGGGCFICGDVHHT 304
>gi|301788510|ref|XP_002929671.1| PREDICTED: cellular nucleic acid-binding protein-like [Ailuropoda
melanoleuca]
Length = 206
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 30/147 (20%)
Query: 206 CFVCGSLEHGVRQCSKAQD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFS 264
C+ CG H + C + C+ C + GH AKDC ++ + ++ Q C CG GH
Sbjct: 83 CYRCGESGHHAKDCDFLEALCYNCGRSGHIAKDCIERKR---ESEQCCYTCGRPGHLARD 139
Query: 265 CRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACA 324
C D +E +CY C +GH+ +V C+RCG+ GH ++ C+
Sbjct: 140 C------DRQEEPKCYSCGEYGHI------QKDCSQVKCYRCGETGHMAIN-------CS 180
Query: 325 RSRGETVEASPSSCYNCGAEGHFAREC 351
++ S +CY CG GH AREC
Sbjct: 181 KT-------SEVNCYRCGESGHLAREC 200
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 26/113 (23%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD--CFICKKGGHRAK 236
CYNCG GH+A +C ++RK+ C+ CG H R C + ++ C+ C + GH K
Sbjct: 103 CYNCGRSGHIAKDC---IERKRESEQCCYTCGRPGHLARDCDRQEEPKCYSCGEYGHIQK 159
Query: 237 DCPDKHKSGFQNAQV-CLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
DC +QV C +CG++GH +C + EV CY C GHL
Sbjct: 160 DC----------SQVKCYRCGETGHMAINCSKT------SEVNCYRCGESGHL 196
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 13/82 (15%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKP-CFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCP 239
Q CY CG GH+A +C ++++P C+ CG H + CS+ + C+ C + GH A +C
Sbjct: 125 QCCYTCGRPGHLARDCD---RQEEPKCYSCGEYGHIQKDCSQVK-CYRCGETGHMAINCS 180
Query: 240 DKHKSGFQNAQV-CLKCGDSGH 260
+ ++V C +CG+SGH
Sbjct: 181 -------KTSEVNCYRCGESGH 195
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD--CFICKKGGHRAKDCP 239
CY+CGE GH+ +C S VK C+ CG H CSK + C+ C + GH A++CP
Sbjct: 148 CYSCGEYGHIQKDC-SQVK----CYRCGETGHMAINCSKTSEVNCYRCGESGHLARECP 201
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 46/111 (41%), Gaps = 11/111 (9%)
Query: 251 VCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLG 310
+C +CG+SGH C D E CY C GH+ I E C+ CG+ G
Sbjct: 82 ICYRCGESGHHAKDC-------DFLEALCYNCGRSGHIAKDCIERKRESEQCCYTCGRPG 134
Query: 311 HTGLHWNSCMQACARSRGE----TVEASPSSCYNCGAEGHFARECVSSSKV 357
H + + S GE + S CY CG GH A C +S+V
Sbjct: 135 HLARDCDRQEEPKCYSCGEYGHIQKDCSQVKCYRCGETGHMAINCSKTSEV 185
>gi|426249735|ref|XP_004018605.1| PREDICTED: cellular nucleic acid-binding protein isoform 2 [Ovis
aries]
Length = 169
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 75/188 (39%), Gaps = 47/188 (25%)
Query: 183 CYNCGEEGHMAVNCRSA----------------VKRKKP--CFVCGSLEHGVRQCSKAQD 224
C+ CG GH A C + V P C+ CG + +
Sbjct: 6 CFKCGRSGHWARECPAGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGPPAKDWIRGGP 65
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
C+ C +GGH AKDC + + + Q C CG GH C D E +CY C
Sbjct: 66 CYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSCGE 116
Query: 285 FGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAE 344
FGH+ D +V C+RCG+ GH ++ + + S +CY CG
Sbjct: 117 FGHI----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCYRCGES 156
Query: 345 GHFARECV 352
GH AREC
Sbjct: 157 GHLARECT 164
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 11/81 (13%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH A +C
Sbjct: 88 QCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGHVAINCS- 143
Query: 241 KHKSGFQNAQV-CLKCGDSGH 260
+ ++V C +CG+SGH
Sbjct: 144 ------KTSEVNCYRCGESGH 158
>gi|296178353|dbj|BAJ07808.1| putative vasa protein [Oxycomanthus japonicus]
Length = 851
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 75/199 (37%), Gaps = 51/199 (25%)
Query: 179 GWQTCYNCGEEGHMAVNCRSA----VKRKKPCFVCGSLEHGVRQC------SKAQDCFIC 228
G ++CY CGE+GH++ +C SA + C CG H R+C + C C
Sbjct: 191 GGRSCYKCGEDGHISRDCPSAGGGGGGGGRGCHKCGEEGHFARECPSGGGGGGGRACHKC 250
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
+ GH A++CP G + C KCG+ GH C + +
Sbjct: 251 GEEGHFARECPSGGGGGGGGGRACRKCGEEGHFARECPSGGGGGGGR------------- 297
Query: 289 CCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEA------------SPS 336
CF+CG+ GH C + + S +
Sbjct: 298 -------------GCFKCGKDGHQA---RDCTEEGSSGGRSGGFRGGFGNSSGGDGKSDT 341
Query: 337 SCYNCGAEGHFARECVSSS 355
+C CG EGHFAREC + S
Sbjct: 342 ACRKCGEEGHFARECPNPS 360
>gi|71756201|ref|XP_829015.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70834401|gb|EAN79903.1| nucleic acid binding protein, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261334955|emb|CBH17949.1| nucleic acid binding protein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 516
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 24/131 (18%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C+ C ++GH+ C + C+ CG+ H ++C C+ C GHR+ DCP +
Sbjct: 86 CFQCHQKGHLLPMCP-----QTRCYNCGNYGHSSQRCLSRPLCYHCSSTGHRSTDCPLRE 140
Query: 243 KSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVS 302
K +VC +C GHDM C SL L C+ C GH+ S P ++S
Sbjct: 141 K-----GRVCYRCKKPGHDMAGC----SLSAL----CFTCNGEGHM-----SAQCP-QIS 181
Query: 303 CFRCGQLGHTG 313
C RC GH
Sbjct: 182 CNRCNAKGHVA 192
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 72/195 (36%), Gaps = 42/195 (21%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP----------CFVCGSLEHGVRQCS---KAQDCFICK 229
C CG GH V C SA KR + C CGS H C K+ +CF C
Sbjct: 31 CSICGNVGHDKVACLSARKRPRTEEEEEALPSVCRSCGSSRHAEASCPLRMKSMECFQCH 90
Query: 230 KGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC 289
+ GH CP C CG+ GH C L CY C GH
Sbjct: 91 QKGHLLPMCPQTR---------CYNCGNYGHSSQRC--------LSRPLCYHCSSTGHR- 132
Query: 290 CVNISDAVP----GEVSCFRCGQLGH--TGLHWNSCMQACARSRGETVEASPSSCYNCGA 343
S P G V C+RC + GH G ++ C + + SC C A
Sbjct: 133 ----STDCPLREKGRV-CYRCKKPGHDMAGCSLSALCFTCNGEGHMSAQCPQISCNRCNA 187
Query: 344 EGHFARECVSSSKVR 358
+GH A +C +S R
Sbjct: 188 KGHVAAQCPQASGNR 202
>gi|16797820|gb|AAL29186.1|AF204398_1 poly-zinc finger protein 2 [Trypanosoma cruzi]
Length = 192
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 85/206 (41%), Gaps = 45/206 (21%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCS-----KAQDCFICKKGGHRA 235
CY CG GH + +C V CF CG H + C+ K CF C++ GHRA
Sbjct: 1 MVCYRCGGVGHTSRDCSRPVNESL-CFRCGKPGHMSKDCASDIDVKNAPCFFCQQAGHRA 59
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL---CCVN 292
+CP + + Q C +CG+ GH C N L K+ C+ C GH C +
Sbjct: 60 NNCP---LAPPEARQPCYRCGEEGHISRDCTNP-RLPRSKQ-SCFHCHKTGHYARECRIV 114
Query: 293 I------SDAVPGEVS---------------CFRCGQLGHTGLHWNSCMQACARSRGETV 331
I S V G ++ CFRCG GH + C +R
Sbjct: 115 IENLKCNSCGVTGHIARRCPERIRTARAFYPCFRCGMQGHVA-------RNCPNTRLPYE 167
Query: 332 EASPSSCYNCGAEGHFARECVSSSKV 357
E CY CG +GH AR+C S + +
Sbjct: 168 E---QLCYVCGEKGHLARDCKSEAPL 190
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 176 PDRGWQTCYNCGEEGHMAVNCRSA--VKRKKPCFVCGSLEHGVRQCSKAQD---CFICKK 230
P Q CY CGEEGH++ +C + + K+ CF C H R+C + C C
Sbjct: 66 PPEARQPCYRCGEEGHISRDCTNPRLPRSKQSCFHCHKTGHYARECRIVIENLKCNSCGV 125
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
GH A+ CP++ ++ + C +CG GH +C N+ +E CY+C GHL
Sbjct: 126 TGHIARRCPERIRTA-RAFYPCFRCGMQGHVARNCPNTRL--PYEEQLCYVCGEKGHL 180
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 178 RGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK-------AQDCFICKK 230
R Q+C++C + GH A CR ++ K C CG H R+C + CF C
Sbjct: 93 RSKQSCFHCHKTGHYARECRIVIENLK-CNSCGVTGHIARRCPERIRTARAFYPCFRCGM 151
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSL 271
GH A++CP+ Q+C CG+ GH C++ L
Sbjct: 152 QGHVARNCPNTRLP--YEEQLCYVCGEKGHLARDCKSEAPL 190
>gi|148666816|gb|EDK99232.1| cellular nucleic acid binding protein, isoform CRA_e [Mus musculus]
Length = 142
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 60/133 (45%), Gaps = 29/133 (21%)
Query: 219 CSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQ 278
C + C+ C +GGH AKDC + + + Q C CG GH C D E +
Sbjct: 33 CRRMVTCYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQK 83
Query: 279 CYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSC 338
CY C FGH+ D +V C+RCG+ GH ++ + + S +C
Sbjct: 84 CYSCGEFGHI----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNC 123
Query: 339 YNCGAEGHFAREC 351
Y CG GH AREC
Sbjct: 124 YRCGESGHLAREC 136
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 66/149 (44%), Gaps = 20/149 (13%)
Query: 143 ETADNGDEGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVK- 201
E A G + ++ + L+ PR R TCYNCG GH+A +C+ +
Sbjct: 1 EAAAEGSSLFPRLSLTSATAVVSLVILPRIVIC--RRMVTCYNCGRGGHIAKDCKEPKRE 58
Query: 202 RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSG 259
R++ C+ CG H R C A Q C+ C + GH KDC C +CG++G
Sbjct: 59 REQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVK---------CYRCGETG 109
Query: 260 HDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
H +C + EV CY C GHL
Sbjct: 110 HVAINCSKT------SEVNCYRCGESGHL 132
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 54 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 110
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
A +C + C +CG+SGH C
Sbjct: 111 VAINCSKTSEVN------CYRCGESGHLAREC 136
>gi|343960683|dbj|BAK61931.1| cellular nucleic acid-binding protein [Pan troglodytes]
Length = 170
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 76/189 (40%), Gaps = 48/189 (25%)
Query: 183 CYNCGEEGHMAVNCRSA----------------VKRKKP--CFVCGSLEHGVRQCSKAQD 224
C+ CG GH A C + V P C+ CG H + C D
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQGD 65
Query: 225 -CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICR 283
C+ C +GGH AKDC + + + Q C CG GH C D E +CY C
Sbjct: 66 ACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSCG 116
Query: 284 CFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGA 343
FGH+ D +V C+RCG+ GH ++ + + S +C CG
Sbjct: 117 EFGHI----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVNCSRCGE 156
Query: 344 EGHFARECV 352
GH AREC
Sbjct: 157 SGHLARECT 165
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 57/130 (43%), Gaps = 36/130 (27%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
CYNCG GH+A +C+ + ++ C C+ C K GH A+DC
Sbjct: 66 ACYNCGRGGHIAKDCKEPKREREQC------------------CYNCGKPGHLARDCD-- 105
Query: 242 HKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEV 301
+ Q C CG+ GH D +V+CY C GH V I+ + EV
Sbjct: 106 ----HADEQKCYSCGEFGHIQ---------KDCTKVKCYRCGETGH---VAINCSKTSEV 149
Query: 302 SCFRCGQLGH 311
+C RCG+ GH
Sbjct: 150 NCSRCGESGH 159
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 82 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 138
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 139 VAINCS-------KTSEVNCSRCGESGH 159
>gi|357444017|ref|XP_003592286.1| Zinc finger CCHC domain-containing protein [Medicago truncatula]
gi|355481334|gb|AES62537.1| Zinc finger CCHC domain-containing protein [Medicago truncatula]
Length = 262
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 11/115 (9%)
Query: 206 CFVCGSLEHGVRQCS------KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSG 259
CF+C L+H + C+ K + C C++ GHRA++CPD ++ + C CGD+G
Sbjct: 69 CFICKGLDHIAKFCTQKAEWEKNKICLRCRRRGHRAQNCPDGGSK--EDFKYCYNCGDNG 126
Query: 260 HDMFSCRNSYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
H + +C + QC++C+ GHL C N P C CG + H
Sbjct: 127 HSLANCPHPLQEGGTMFAQCFVCKEQGHLSKNCPKNAHGIYPKGGCCKICGGVTH 181
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 48/104 (46%), Gaps = 16/104 (15%)
Query: 159 DNIVLRKLLRGPRYFDPPDRG----WQTCYNCGEEGHMAVNCRSAVKRK----KPCFVCG 210
+ I LR RG R + PD G ++ CYNCG+ GH NC ++ CFVC
Sbjct: 91 NKICLRCRRRGHRAQNCPDGGSKEDFKYCYNCGDNGHSLANCPHPLQEGGTMFAQCFVCK 150
Query: 211 SLEHGVRQCSKAQD--------CFICKKGGHRAKDCPDKHKSGF 246
H + C K C IC H A+DCPDK ++GF
Sbjct: 151 EQGHLSKNCPKNAHGIYPKGGCCKICGGVTHLARDCPDKGQNGF 194
>gi|71416079|ref|XP_810083.1| poly-zinc finger protein 2 [Trypanosoma cruzi strain CL Brener]
gi|70874564|gb|EAN88232.1| poly-zinc finger protein 2, putative [Trypanosoma cruzi]
Length = 192
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 82/204 (40%), Gaps = 41/204 (20%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCS-----KAQDCFICKKGGHRA 235
CY CG GH + +C V CF CG H + C+ K CF C++ GHRA
Sbjct: 1 MVCYRCGGVGHTSRDCSRPVNESL-CFRCGKPGHMSKDCASDIDVKNAPCFFCQQAGHRA 59
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNS-----------------YS---LDDLK 275
+CP + + Q C +CG+ GH C N Y+ + ++
Sbjct: 60 NNCP---LAPPEARQPCYRCGEEGHISRDCTNPRLPRSEQSCFHCHKTGHYARECPEVIE 116
Query: 276 EVQCYICRCFGHLC--CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEA 333
++C C GH+ C CFRCG GH + C +R E
Sbjct: 117 NLKCNSCGVTGHIARRCPERIRTARAFYPCFRCGMQGHVA-------RNCPNTRLPYEE- 168
Query: 334 SPSSCYNCGAEGHFARECVSSSKV 357
CY CG +GH AR+C S + +
Sbjct: 169 --QLCYVCGEKGHLARDCKSEAPL 190
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 176 PDRGWQTCYNCGEEGHMAVNCRSA--VKRKKPCFVCGSLEHGVRQCSKAQD---CFICKK 230
P Q CY CGEEGH++ +C + + ++ CF C H R+C + + C C
Sbjct: 66 PPEARQPCYRCGEEGHISRDCTNPRLPRSEQSCFHCHKTGHYARECPEVIENLKCNSCGV 125
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
GH A+ CP++ ++ + C +CG GH +C N+ +E CY+C GHL
Sbjct: 126 TGHIARRCPERIRTA-RAFYPCFRCGMQGHVARNCPNTRL--PYEEQLCYVCGEKGHL 180
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 178 RGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK-------AQDCFICKK 230
R Q+C++C + GH A C ++ K C CG H R+C + CF C
Sbjct: 93 RSEQSCFHCHKTGHYARECPEVIENLK-CNSCGVTGHIARRCPERIRTARAFYPCFRCGM 151
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSL 271
GH A++CP+ Q+C CG+ GH C++ L
Sbjct: 152 QGHVARNCPNTRLP--YEEQLCYVCGEKGHLARDCKSEAPL 190
>gi|300122852|emb|CBK23859.2| unnamed protein product [Blastocystis hominis]
Length = 158
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 73/183 (39%), Gaps = 43/183 (23%)
Query: 183 CYNCGEEGHMAVNC----RSAVKRKKPCFVCGSLEHGVRQCS------KAQDCFICKKGG 232
CY CGE+GH A +C S +R C++CG H R C + C+ C K G
Sbjct: 3 CYVCGEKGHKARDCPNRENSNNERPVKCYICGGFGHISRDCPSESGNRRETTCYNCGKPG 62
Query: 233 HRAKDCPDKHKSGFQNAQ----VCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
H ++DCP++H + +C KC GH C N ++ C+ C GH
Sbjct: 63 HISRDCPEEHTHPVNPQRSRVIICRKCNQEGHIARDCPN--------DIVCHNCHQAGH- 113
Query: 289 CCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFA 348
++ P E C C Q GH + + C CG GH A
Sbjct: 114 ----VARDCPNEALCHNCNQPGHLARNC----------------PNEGVCRKCGQSGHIA 153
Query: 349 REC 351
R+C
Sbjct: 154 RDC 156
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 65/156 (41%), Gaps = 32/156 (20%)
Query: 224 DCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICR 283
+C++C + GH+A+DCP++ S + C CG GH C + + +E CY C
Sbjct: 2 ECYVCGEKGHKARDCPNRENSNNERPVKCYICGGFGHISRDCPSESG--NRRETTCYNCG 59
Query: 284 CFGHLCCVNISDAVPGE------------VSCFRCGQLGHTG------LHWNSCMQACAR 325
GH IS P E + C +C Q GH + ++C QA
Sbjct: 60 KPGH-----ISRDCPEEHTHPVNPQRSRVIICRKCNQEGHIARDCPNDIVCHNCHQA--- 111
Query: 326 SRGETVEASPSS--CYNCGAEGHFARECVSSSKVRK 359
G P+ C+NC GH AR C + RK
Sbjct: 112 --GHVARDCPNEALCHNCNQPGHLARNCPNEGVCRK 145
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 47/110 (42%), Gaps = 19/110 (17%)
Query: 177 DRGWQTCYNCGEEGHMAVNC--------RSAVKRKKPCFVCGSLEHGVRQCSKAQDCFIC 228
+R TCYNCG+ GH++ +C R C C H R C C C
Sbjct: 49 NRRETTCYNCGKPGHISRDCPEEHTHPVNPQRSRVIICRKCNQEGHIARDCPNDIVCHNC 108
Query: 229 KKGGHRAKDCPDK------HKSGF-----QNAQVCLKCGDSGHDMFSCRN 267
+ GH A+DCP++ ++ G N VC KCG SGH C N
Sbjct: 109 HQAGHVARDCPNEALCHNCNQPGHLARNCPNEGVCRKCGQSGHIARDCPN 158
>gi|212721230|ref|NP_001132383.1| actin depolymerizing factor [Zea mays]
gi|194694234|gb|ACF81201.1| unknown [Zea mays]
gi|414585937|tpg|DAA36508.1| TPA: actin depolymerizing factor [Zea mays]
Length = 276
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 206 CFVCGSLEHGVRQCS------KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSG 259
CF+C S +H + C K + C +C++ GH K+CPDK + + C CG+SG
Sbjct: 71 CFICKSTDHVAKACPEKALWDKKKICLLCRERGHSLKNCPDKSEGNLM--KFCYNCGESG 128
Query: 260 HDMFSCRNSYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGHTGLH 315
H + C C+IC GHL C N P C CG++ H H
Sbjct: 129 HSLSKCPKPIENGGTNFASCFICNQQGHLSKNCPENKHGIYPKGGCCKVCGEVTHLARH 187
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 10/97 (10%)
Query: 181 QTCYNCGEEGHMAVNC--RSAVKRKKPCFVCGSLEHGVRQCSKAQD--------CFICKK 230
+ C C E GH NC +S K C+ CG H + +C K + CFIC +
Sbjct: 94 KICLLCRERGHSLKNCPDKSEGNLMKFCYNCGESGHSLSKCPKPIENGGTNFASCFICNQ 153
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
GH +K+CP+ + C CG+ H C N
Sbjct: 154 QGHLSKNCPENKHGIYPKGGCCKVCGEVTHLARHCPN 190
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 36/127 (28%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
CFICK H AK CP+K + + ++CL C + GH + +C + + +K
Sbjct: 71 CFICKSTDHVAKACPEK--ALWDKKKICLLCRERGHSLKNCPDKSEGNLMK--------- 119
Query: 285 FGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAE 344
C+ CG+ GH+ + C + E + +SC+ C +
Sbjct: 120 -----------------FCYNCGESGHS-------LSKCPKPI-ENGGTNFASCFICNQQ 154
Query: 345 GHFAREC 351
GH ++ C
Sbjct: 155 GHLSKNC 161
>gi|148666813|gb|EDK99229.1| cellular nucleic acid binding protein, isoform CRA_b [Mus musculus]
Length = 140
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 66/159 (41%), Gaps = 41/159 (25%)
Query: 206 CFVCGSLEHGVRQC------------SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCL 253
CF CG H R+C C+ C +GGH AKDC + + + Q C
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGACYNCGRGGHIAKDCKEPKR---EREQCCY 62
Query: 254 KCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTG 313
CG GH C D E +CY C FGH+ D +V C+RCG+ GH
Sbjct: 63 NCGKPGHLARDC------DHADEQKCYSCGEFGHI----QKDCT--KVKCYRCGETGHVA 110
Query: 314 LHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECV 352
++ + + S +CY CG GH AREC
Sbjct: 111 INCS--------------KTSEVNCYRCGESGHLARECT 135
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KDC
Sbjct: 36 ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDC 95
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CG++GH +C + EV CY C GHL
Sbjct: 96 ---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 130
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 52 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 108
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 109 VAINCS-------KTSEVNCYRCGESGH 129
>gi|58004785|gb|AAW62455.1| cellular nucleic acid binding protein mutant H128Q [synthetic
construct]
Length = 178
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 66/148 (44%), Gaps = 30/148 (20%)
Query: 206 CFVCGSLEHGVRQCSKAQD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFS 264
C+ CG H + C +D C+ C +GGH AKDC + K + Q C CG GH
Sbjct: 55 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPRK---EREQCCYNCGKPGHLARD 111
Query: 265 CRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACA 324
C ++ E +CY C FG + D +V C+RCG GH ++ +
Sbjct: 112 CEHA------DEQKCYSCGEFGQI----QKDCT--KVKCYRCGDTGHVAINCS------- 152
Query: 325 RSRGETVEASPSSCYNCGAEGHFARECV 352
+ S +CY CG GH AREC
Sbjct: 153 -------KTSEVNCYRCGESGHLARECT 173
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG GH+A +C+ K R++ C+ CG H R C A Q C+ C + G KDC
Sbjct: 74 ACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDCEHADEQKCYSCGEFGQIQKDC 133
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CGD+GH +C + EV CY C GHL
Sbjct: 134 ---------TKVKCYRCGDTGHVAINCSKT------SEVNCYRCGESGHL 168
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG + C+K + C+ C GH
Sbjct: 90 EPRKEREQCCYNCGKPGHLARDCEHADEQK--CYSCGEFGQIQKDCTKVK-CYRCGDTGH 146
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 147 VAINCS-------KTSEVNCYRCGESGH 167
>gi|7263178|gb|AAF44118.1| cellular nucleic acid binding protein mutant H107Q [synthetic
construct]
Length = 178
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 66/148 (44%), Gaps = 30/148 (20%)
Query: 206 CFVCGSLEHGVRQCSKAQD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFS 264
C+ CG H + C +D C+ C +GGH AKDC + K + Q C CG G
Sbjct: 55 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPRK---EREQCCYNCGKPGQLARD 111
Query: 265 CRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACA 324
C ++ E +CY C FGH+ D +V C+RCG GH ++ +
Sbjct: 112 CEHA------DEQKCYSCGEFGHI----QKDCT--KVKCYRCGDTGHVAINCS------- 152
Query: 325 RSRGETVEASPSSCYNCGAEGHFARECV 352
+ S +CY CG GH AREC
Sbjct: 153 -------KTSEVNCYRCGESGHLARECT 173
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG GH+A +C+ K R++ C+ CG R C A Q C+ C + GH KDC
Sbjct: 74 ACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGQLARDCEHADEQKCYSCGEFGHIQKDC 133
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CGD+GH +C + EV CY C GHL
Sbjct: 134 ---------TKVKCYRCGDTGHVAINCSKT------SEVNCYRCGESGHL 168
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ G +A +C A ++K C+ CG H + C+K + C+ C GH
Sbjct: 90 EPRKEREQCCYNCGKPGQLARDCEHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGDTGH 146
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 147 VAINCS-------KTSEVNCYRCGESGH 167
>gi|310792827|gb|EFQ28288.1| zinc knuckle [Glomerella graminicola M1.001]
Length = 454
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 69/191 (36%), Gaps = 56/191 (29%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P R Q C NC E GH++ +C K + C+ C + GH
Sbjct: 239 EPVSRLLQKCINCNELGHISKSCPQEAMEKARITI---------------TCYNCGEEGH 283
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNI 293
R +DCP F C CG SGH + C D
Sbjct: 284 RVRDCPTPRVDKF----ACKNCGQSGHKVSECTEPRKAGD-------------------- 319
Query: 294 SDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVS 353
+V C +C ++GH +R + +C+NCG EGH +REC
Sbjct: 320 ------DVECNKCHEMGHF-----------SRDCPQGGGGGGRACHNCGNEGHISRECPE 362
Query: 354 SSKVRKRNIDA 364
K++ RN DA
Sbjct: 363 PRKIKCRNCDA 373
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 19/138 (13%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ------DCFICKKGGHRA 235
TCYNCGEEGH +C + K C CG H V +C++ + +C C + GH +
Sbjct: 274 TCYNCGEEGHRVRDCPTPRVDKFACKNCGQSGHKVSECTEPRKAGDDVECNKCHEMGHFS 333
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNI 293
+DCP + G + C CG+ GH C + ++++C C GHL C
Sbjct: 334 RDCP---QGGGGGGRACHNCGNEGHISREC------PEPRKIKCRNCDADGHLSKDCDKP 384
Query: 294 SDAVPGEVSCFRCGQLGH 311
D + C CG++GH
Sbjct: 385 VDVT--RIKCNNCGEMGH 400
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 42/95 (44%), Gaps = 9/95 (9%)
Query: 181 QTCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQC--SKAQDCFICKKGGHRAKD 237
+ C+NCG+ GH +C K C CG H R C + A C IC + GH KD
Sbjct: 32 RACFNCGQSGHNKADCPERPKGFDGTCRACGQEGHSRRDCPDAPAMTCRICGEEGHIRKD 91
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
CP K A C C + GH+ C+ +D
Sbjct: 92 CPQK------PADACRNCLEEGHETVECKAPRKID 120
>gi|119496265|ref|XP_001264906.1| zinc knuckle domain protein [Neosartorya fischeri NRRL 181]
gi|119413068|gb|EAW23009.1| zinc knuckle domain protein [Neosartorya fischeri NRRL 181]
Length = 170
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 16/107 (14%)
Query: 173 FDPPDRGWQTCYNCGEEGHMAVNC------------RSAVKRKKPCFVCGSLEHGVRQCS 220
++ G Q CY CG+ GH+A NC R++ C+ CG H R C+
Sbjct: 68 YNGAPSGGQECYKCGQVGHIARNCSQGGNYGGGFGHGGYGGRQQTCYSCGGFGHMARDCT 127
Query: 221 KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
Q C+ C GH ++DCP + K +VC KC GH +C N
Sbjct: 128 HGQKCYNCGDVGHVSRDCPTEAK----GERVCYKCKQPGHVQAACPN 170
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 63/171 (36%), Gaps = 40/171 (23%)
Query: 189 EGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQN 248
+GH++ C A K K C+ CG H R+CS+A D +
Sbjct: 30 QGHVSRECTVAPKEKS-CYRCGVAGHISRECSQAGS--------------GDNYNGAPSG 74
Query: 249 AQVCLKCGDSGHDMFSCRN--------SYSLDDLKEVQCYICRCFGHLCCVNISDAVPGE 300
Q C KCG GH +C + ++ CY C FGH+ D G+
Sbjct: 75 GQECYKCGQVGHIARNCSQGGNYGGGFGHGGYGGRQQTCYSCGGFGHM----ARDCTHGQ 130
Query: 301 VSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
C+ CG +GH + ++GE V CY C GH C
Sbjct: 131 -KCYNCGDVGHVSRDCPT------EAKGERV------CYKCKQPGHVQAAC 168
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 47/125 (37%), Gaps = 24/125 (19%)
Query: 232 GHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCV 291
GH +++C K + C +CG +GH C + S D
Sbjct: 31 GHVSRECTVAPKE-----KSCYRCGVAGHISRECSQAGSGD------------------- 66
Query: 292 NISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
N + A G C++CGQ+GH + + +CY+CG GH AR+C
Sbjct: 67 NYNGAPSGGQECYKCGQVGHIARNCSQGGNYGGGFGHGGYGGRQQTCYSCGGFGHMARDC 126
Query: 352 VSSSK 356
K
Sbjct: 127 THGQK 131
>gi|145238910|ref|XP_001392102.1| cellular nucleic acid-binding protein [Aspergillus niger CBS
513.88]
gi|134076603|emb|CAK45156.1| unnamed protein product [Aspergillus niger]
Length = 171
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 66/158 (41%), Gaps = 33/158 (20%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA----------- 222
D P +G TCYNCG +GH++ C A K K C+ CG + H R+C +
Sbjct: 22 DCPKKGTPTCYNCGGQGHVSRECTVAPKEKS-CYRCGGVGHISRECQASPAEGFGAAAGG 80
Query: 223 -QDCFICKKGGHRAKDCPDKHKSGFQNA---QVCLKCGDSGHDMFSCRNSYSLDDLKEVQ 278
Q+C+ C + GH A++CP Q C CG GH C N + EV
Sbjct: 81 GQECYKCGRVGHIARNCPQSGGYSGGFGGRQQTCYSCGGFGHMARDCTNGQKCYNCGEV- 139
Query: 279 CYICRCFGHLCCVNISDAVP----GEVSCFRCGQLGHT 312
GH +S P GE C+ C Q GH
Sbjct: 140 -------GH-----VSRDCPTEAKGERVCYNCKQPGHV 165
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 11/94 (11%)
Query: 181 QTCYNCGEEGHMAVNC-------RSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
Q CY CG GH+A NC R++ C+ CG H R C+ Q C+ C + GH
Sbjct: 82 QECYKCGRVGHIARNCPQSGGYSGGFGGRQQTCYSCGGFGHMARDCTNGQKCYNCGEVGH 141
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
++DCP + K +VC C GH +C N
Sbjct: 142 VSRDCPTEAKG----ERVCYNCKQPGHVQAACPN 171
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 78/184 (42%), Gaps = 31/184 (16%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVKRKKP-CFVCGSLEHGVRQCS---KAQDCFICKKGGHR 234
G + C+NCG+ H A R K+ P C+ CG H R+C+ K + C+ C GH
Sbjct: 6 GGRGCFNCGDASHQA---RDCPKKGTPTCYNCGGQGHVSRECTVAPKEKSCYRCGGVGHI 62
Query: 235 AKDC----PDKHKSGFQNAQVCLKCGDSGHDMFSC---RNSYSLDDLKEVQCYICRCFGH 287
+++C + + Q C KCG GH +C ++ CY C FGH
Sbjct: 63 SRECQASPAEGFGAAAGGGQECYKCGRVGHIARNCPQSGGYSGGFGGRQQTCYSCGGFGH 122
Query: 288 LCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHF 347
+ D G+ C+ CG++GH + ++GE V CYNC GH
Sbjct: 123 M----ARDCTNGQ-KCYNCGEVGHVSRDCPT------EAKGERV------CYNCKQPGHV 165
Query: 348 AREC 351
C
Sbjct: 166 QAAC 169
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 56/142 (39%), Gaps = 27/142 (19%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
CF C H+A+DCP K C CG GH C + KE CY C
Sbjct: 10 CFNCGDASHQARDCPKK------GTPTCYNCGGQGHVSRECTVA-----PKEKSCYRCGG 58
Query: 285 FGHLCCVNISDAVPGEVS---------CFRCGQLGHTGLHWNSCMQACARSRGETVEASP 335
GH+ A P E C++CG++GH +C Q+
Sbjct: 59 VGHI--SRECQASPAEGFGAAAGGGQECYKCGRVGHIA---RNCPQS--GGYSGGFGGRQ 111
Query: 336 SSCYNCGAEGHFARECVSSSKV 357
+CY+CG GH AR+C + K
Sbjct: 112 QTCYSCGGFGHMARDCTNGQKC 133
>gi|407925395|gb|EKG18406.1| Zinc finger CCHC-type protein [Macrophomina phaseolina MS6]
Length = 244
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 72/196 (36%), Gaps = 39/196 (19%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
+ CY CG GH A C S+ ++ C+ C H C ++ + C+ C+ GH
Sbjct: 34 RACYKCGNVGHYAEVCSSS---ERLCYNCKQPGHESNGCPHPRTTETKQCYHCQGLGHVQ 90
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNS--------------------YSLDDLK 275
DCP SG + C CG GH SC N +
Sbjct: 91 ADCPTLRLSGAGTSGRCYSCGQPGHLARSCPNPAGGVGRGAGIPRGGYGGFRGGFAGGPR 150
Query: 276 EVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASP 335
CY C H D + C+ CG+LGH + C G + +
Sbjct: 151 PATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI-------SRDCTAPNGGPLNTAG 199
Query: 336 SSCYNCGAEGHFAREC 351
+CY CG GH +REC
Sbjct: 200 KTCYRCGEAGHISREC 215
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 12/73 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK---------AQDCFICKKGG 232
TCY CG H A +C++ + C+ CG L H R C+ + C+ C + G
Sbjct: 153 TCYKCGGPNHFARDCQAQAMK---CYACGKLGHISRDCTAPNGGPLNTAGKTCYRCGEAG 209
Query: 233 HRAKDCPDKHKSG 245
H +++CP +G
Sbjct: 210 HISRECPQAEING 222
>gi|408387760|gb|EKJ67470.1| hypothetical protein FPSE_12389 [Fusarium pseudograminearum CS3096]
Length = 180
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 70/157 (44%), Gaps = 29/157 (18%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC------SKAQDCFI 227
D P +G CYNCG EGHM+ +C +K K C+ CG H R C +A +C+
Sbjct: 28 DCPTKGPAKCYNCGGEGHMSRDCTEPMKDNKSCYKCGQPGHISRDCPMSGGSGQATECYK 87
Query: 228 CKKGGHRAKDCPDKHKSGFQN------------AQVCLKCGDSGHDMFSCRNSYSLDDLK 275
C + GH A++C +KS + N + C CG GH C N
Sbjct: 88 CGEIGHIARNC---NKSSYGNNYGGGFQQQGGAGKTCYSCGGFGHMSRECVNG------- 137
Query: 276 EVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHT 312
++CY C GH ++ GE C++C Q GH
Sbjct: 138 -MKCYNCGESGHYSRDCPKESAGGEKICYKCQQPGHV 173
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 42/96 (43%), Gaps = 16/96 (16%)
Query: 183 CYNCGEEGHMAVNCRSA-------------VKRKKPCFVCGSLEHGVRQCSKAQDCFICK 229
CY CGE GH+A NC + K C+ CG H R+C C+ C
Sbjct: 85 CYKCGEIGHIARNCNKSSYGNNYGGGFQQQGGAGKTCYSCGGFGHMSRECVNGMKCYNCG 144
Query: 230 KGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
+ GH ++DCP + G ++C KC GH C
Sbjct: 145 ESGHYSRDCPKESAGG---EKICYKCQQPGHVQSQC 177
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 58/161 (36%), Gaps = 45/161 (27%)
Query: 206 CFVCGSLEHGVRQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMF 263
C+ CGS H R C C+ C GH ++DC + K + + C KCG GH
Sbjct: 16 CYSCGSTAHQARDCPTKGPAKCYNCGGEGHMSRDCTEPMK----DNKSCYKCGQPGHISR 71
Query: 264 SCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQAC 323
C S E C++CG++GH + N
Sbjct: 72 DCPMSGGSGQATE--------------------------CYKCGEIGHIARNCNK----- 100
Query: 324 ARSRGETVEASPS-------SCYNCGAEGHFARECVSSSKV 357
S G +CY+CG GH +RECV+ K
Sbjct: 101 -SSYGNNYGGGFQQQGGAGKTCYSCGGFGHMSRECVNGMKC 140
>gi|217073290|gb|ACJ85004.1| unknown [Medicago truncatula]
Length = 262
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 11/115 (9%)
Query: 206 CFVCGSLEHGVRQCS------KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSG 259
CF+C L+H + C+ K + C C++ GHRA++CPD ++ + C CGD+G
Sbjct: 69 CFICKGLDHIAKFCTQKAEWEKNKICVRCRRRGHRAQNCPDGGSK--EDFKYCYNCGDNG 126
Query: 260 HDMFSCRNSYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
H + +C + QC++C+ GHL C N P C CG + H
Sbjct: 127 HSLANCPHPLQEGGTMFAQCFVCKEQGHLSKNCPKNAHGIYPKGGCCKICGGVTH 181
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 48/104 (46%), Gaps = 16/104 (15%)
Query: 159 DNIVLRKLLRGPRYFDPPDRG----WQTCYNCGEEGHMAVNCRSAVKRK----KPCFVCG 210
+ I +R RG R + PD G ++ CYNCG+ GH NC ++ CFVC
Sbjct: 91 NKICVRCRRRGHRAQNCPDGGSKEDFKYCYNCGDNGHSLANCPHPLQEGGTMFAQCFVCK 150
Query: 211 SLEHGVRQCSKAQD--------CFICKKGGHRAKDCPDKHKSGF 246
H + C K C IC H A+DCPDK ++GF
Sbjct: 151 EQGHLSKNCPKNAHGIYPKGGCCKICGGVTHLARDCPDKGQNGF 194
>gi|195638752|gb|ACG38844.1| actin depolymerizing factor [Zea mays]
Length = 276
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 51/119 (42%), Gaps = 11/119 (9%)
Query: 206 CFVCGSLEHGVRQCS------KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSG 259
CF+C S +H + C K + C +C++ GH K+CPDK + C CG+SG
Sbjct: 71 CFICKSTDHVAKACPEKALWDKKKICLLCRERGHSLKNCPDKXXGNLM--KFCYNCGESG 128
Query: 260 HDMFSCRNSYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGHTGLH 315
H + C C+IC GHL C N P C CG++ H H
Sbjct: 129 HSLSKCPKPIENGGTNFASCFICNQQGHLSKNCPENKHGIYPKGGCCKVCGEVTHLARH 187
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 41/97 (42%), Gaps = 10/97 (10%)
Query: 181 QTCYNCGEEGHMAVNC--RSAVKRKKPCFVCGSLEHGVRQCSKAQD--------CFICKK 230
+ C C E GH NC + K C+ CG H + +C K + CFIC +
Sbjct: 94 KICLLCRERGHSLKNCPDKXXGNLMKFCYNCGESGHSLSKCPKPIENGGTNFASCFICNQ 153
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
GH +K+CP+ + C CG+ H C N
Sbjct: 154 QGHLSKNCPENKHGIYPKGGCCKVCGEVTHLARHCPN 190
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 36/127 (28%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
CFICK H AK CP+K + + ++CL C + GH + +C + + +K
Sbjct: 71 CFICKSTDHVAKACPEK--ALWDKKKICLLCRERGHSLKNCPDKXXGNLMK--------- 119
Query: 285 FGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAE 344
C+ CG+ GH+ + C + E + +SC+ C +
Sbjct: 120 -----------------FCYNCGESGHS-------LSKCPKPI-ENGGTNFASCFICNQQ 154
Query: 345 GHFAREC 351
GH ++ C
Sbjct: 155 GHLSKNC 161
>gi|7263180|gb|AAF44119.1| cellular nucleic acid binding protein mutant H128D [synthetic
construct]
Length = 178
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 66/148 (44%), Gaps = 30/148 (20%)
Query: 206 CFVCGSLEHGVRQCSKAQD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFS 264
C+ CG H + C +D C+ C +GGH AKDC + K + Q C CG GH
Sbjct: 55 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPRK---EREQCCYNCGKPGHLARD 111
Query: 265 CRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACA 324
C ++ E +CY C FG + D +V C+RCG GH ++ +
Sbjct: 112 CEHA------DEQKCYSCGEFGDI----QKDCT--KVKCYRCGDTGHVAINCS------- 152
Query: 325 RSRGETVEASPSSCYNCGAEGHFARECV 352
+ S +CY CG GH AREC
Sbjct: 153 -------KTSEVNCYRCGESGHLARECT 173
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG GH+A +C+ K R++ C+ CG H R C A Q C+ C + G KDC
Sbjct: 74 ACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDCEHADEQKCYSCGEFGDIQKDC 133
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CGD+GH +C + EV CY C GHL
Sbjct: 134 ---------TKVKCYRCGDTGHVAINCSKT------SEVNCYRCGESGHL 168
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 11/81 (13%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
Q CYNCG+ GH+A +C A ++K C+ CG + C+K + C+ C GH A +C
Sbjct: 97 QCCYNCGKPGHLARDCEHADEQK--CYSCGEFGDIQKDCTKVK-CYRCGDTGHVAINCS- 152
Query: 241 KHKSGFQNAQV-CLKCGDSGH 260
+ ++V C +CG+SGH
Sbjct: 153 ------KTSEVNCYRCGESGH 167
>gi|358395035|gb|EHK44428.1| hypothetical protein TRIATDRAFT_300647 [Trichoderma atroviride IMI
206040]
Length = 222
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 73/199 (36%), Gaps = 42/199 (21%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
+ CY CG GH A C SA ++ C+ C H C ++A+ C+ C+ GH
Sbjct: 7 RACYKCGNVGHYAEVCSSA---ERLCYNCKQPGHESNGCPLPRSTEAKQCYHCQGLGHVQ 63
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNS-----------------------YSLD 272
DCP SG C CG GH +C N +
Sbjct: 64 ADCPTLRLSGTATGGRCYNCGQPGHLARACPNPGNPGMGRGAPMGRGGFVGGYGRGGFAN 123
Query: 273 DLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVE 332
+ CY C H D + C+ CG+LGH + C G +
Sbjct: 124 GPRPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI-------SRDCTAPNGGPLN 172
Query: 333 ASPSSCYNCGAEGHFAREC 351
+ +CY CG GH +R+C
Sbjct: 173 TAGKTCYQCGEAGHISRDC 191
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 61/155 (39%), Gaps = 23/155 (14%)
Query: 203 KKPCFVCGSLEHGVRQCSKAQD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHD 261
++ C+ CG++ H CS A+ C+ CK+ GH + CP + A+ C C GH
Sbjct: 6 RRACYKCGNVGHYAEVCSSAERLCYNCKQPGHESNGCPLPRST---EAKQCYHCQGLGHV 62
Query: 262 MFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQ 321
C +CY C GHL + A P G+ G+ + M
Sbjct: 63 QADCPTLRLSGTATGGRCYNCGQPGHL-----ARACPNP---------GNPGMGRGAPMG 108
Query: 322 ACARSRGETVEAS-----PSSCYNCGAEGHFAREC 351
G P++CY CG HFAR+C
Sbjct: 109 RGGFVGGYGRGGFANGPRPATCYKCGGPNHFARDC 143
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 12/69 (17%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC---------SKAQDCFICKKGG 232
TCY CG H A +C++ + C+ CG L H R C + + C+ C + G
Sbjct: 129 TCYKCGGPNHFARDCQAQAMK---CYACGKLGHISRDCTAPNGGPLNTAGKTCYQCGEAG 185
Query: 233 HRAKDCPDK 241
H ++DCP K
Sbjct: 186 HISRDCPQK 194
>gi|57648428|gb|AAW55909.1| zinc finger protein 8 [Trypanosoma cruzi]
Length = 192
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 81/206 (39%), Gaps = 45/206 (21%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCS-----KAQDCFICKKGGHRA 235
CY CG GH + +C V CF CG H + C+ K CF C++ GHRA
Sbjct: 1 MVCYRCGGVGHTSRDCSRPVNESL-CFRCGKPGHMSKDCASDIDVKNAPCFFCQQAGHRA 59
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNI 293
CP + + Q C +CG+ GH C N E C+ C GH C +
Sbjct: 60 NSCP---LAPPEARQPCYRCGEEGHISRDCTNPRL--PRSEQSCFHCHKAGHYARECPEV 114
Query: 294 -------SDAVPGEVS---------------CFRCGQLGHTGLHWNSCMQACARSRGETV 331
S V G ++ CFRCG GH + C +R
Sbjct: 115 IENLKCNSCGVTGHIARRCPERIRTARAFYPCFRCGMQGHVA-------RNCPNTRLPYE 167
Query: 332 EASPSSCYNCGAEGHFARECVSSSKV 357
E CY CG +GH AR+C S + +
Sbjct: 168 E---QLCYVCGEKGHLARDCKSEAPL 190
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 176 PDRGWQTCYNCGEEGHMAVNCRSA--VKRKKPCFVCGSLEHGVRQCSKAQD---CFICKK 230
P Q CY CGEEGH++ +C + + ++ CF C H R+C + + C C
Sbjct: 66 PPEARQPCYRCGEEGHISRDCTNPRLPRSEQSCFHCHKAGHYARECPEVIENLKCNSCGV 125
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
GH A+ CP++ ++ + C +CG GH +C N+ +E CY+C GHL
Sbjct: 126 TGHIARRCPERIRTA-RAFYPCFRCGMQGHVARNCPNTRL--PYEEQLCYVCGEKGHL 180
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 178 RGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK-------AQDCFICKK 230
R Q+C++C + GH A C ++ K C CG H R+C + CF C
Sbjct: 93 RSEQSCFHCHKAGHYARECPEVIENLK-CNSCGVTGHIARRCPERIRTARAFYPCFRCGM 151
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSL 271
GH A++CP+ Q+C CG+ GH C++ L
Sbjct: 152 QGHVARNCPNTRLP--YEEQLCYVCGEKGHLARDCKSEAPL 190
>gi|58004789|gb|AAW62456.1| cellular nucleic acid binding protein mutant H128A [synthetic
construct]
Length = 178
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 66/148 (44%), Gaps = 30/148 (20%)
Query: 206 CFVCGSLEHGVRQCSKAQD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFS 264
C+ CG H + C +D C+ C +GGH AKDC + K + Q C CG GH
Sbjct: 55 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPRK---EREQCCYNCGKPGHLARD 111
Query: 265 CRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACA 324
C ++ E +CY C FG + D +V C+RCG GH ++ +
Sbjct: 112 CEHA------DEQKCYSCGEFGAI----QKDCT--KVKCYRCGDTGHVAINCS------- 152
Query: 325 RSRGETVEASPSSCYNCGAEGHFARECV 352
+ S +CY CG GH AREC
Sbjct: 153 -------KTSEVNCYRCGESGHLARECT 173
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG GH+A +C+ K R++ C+ CG H R C A Q C+ C + G KDC
Sbjct: 74 ACYNCGRGGHIAKDCKEPRKEREQCCYNCGKPGHLARDCEHADEQKCYSCGEFGAIQKDC 133
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CGD+GH +C + EV CY C GHL
Sbjct: 134 ---------TKVKCYRCGDTGHVAINCSKT------SEVNCYRCGESGHL 168
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 11/81 (13%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
Q CYNCG+ GH+A +C A ++K C+ CG + C+K + C+ C GH A +C
Sbjct: 97 QCCYNCGKPGHLARDCEHADEQK--CYSCGEFGAIQKDCTKVK-CYRCGDTGHVAINCS- 152
Query: 241 KHKSGFQNAQV-CLKCGDSGH 260
+ ++V C +CG+SGH
Sbjct: 153 ------KTSEVNCYRCGESGH 167
>gi|358390183|gb|EHK39589.1| hypothetical protein TRIATDRAFT_302941 [Trichoderma atroviride IMI
206040]
Length = 176
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 67/161 (41%), Gaps = 33/161 (20%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC---------SKAQD 224
D P +G CYNCG EGH++ +C +K K C+ CG H R C +
Sbjct: 21 DCPTKGPAKCYNCGGEGHLSRDCTEPMKDNKSCYKCGQPGHISRDCPQAGAAGGGQAGTE 80
Query: 225 CFICKKGGHRAKDCPDKHKSGFQN-------------AQVCLKCGDSGHDMFSCRNSYSL 271
C+ C + GH A+ CP KSGF + C CG GH C N
Sbjct: 81 CYKCGEKGHIARSCP---KSGFGGNSYGGNSGYGGGAGKTCYSCGGYGHMSRECVNG--- 134
Query: 272 DDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHT 312
++CY C GH +A GE C++C Q GH
Sbjct: 135 -----MKCYNCGESGHYSRDCPKEAAGGEKICYKCQQGGHV 170
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 183 CYNCGEEGHMAVNC--------------RSAVKRKKPCFVCGSLEHGVRQCSKAQDCFIC 228
CY CGE+GH+A +C K C+ CG H R+C C+ C
Sbjct: 81 CYKCGEKGHIARSCPKSGFGGNSYGGNSGYGGGAGKTCYSCGGYGHMSRECVNGMKCYNC 140
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
+ GH ++DCP + G ++C KC GH C N
Sbjct: 141 GESGHYSRDCPKEAAGG---EKICYKCQQGGHVQAQCPN 176
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 69/175 (39%), Gaps = 37/175 (21%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA----QDCFICKKGGHRAKD 237
CY+CG GH A +C K C+ CG H R C++ + C+ C + GH ++D
Sbjct: 8 ACYSCGNAGHQARDC--PTKGPAKCYNCGGEGHLSRDCTEPMKDNKSCYKCGQPGHISRD 65
Query: 238 CPDKHKSGFQNAQV-CLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDA 296
CP +G A C KCG+ GH SC S +
Sbjct: 66 CPQAGAAGGGQAGTECYKCGEKGHIARSCPKSGFGGNSYGGN--------------SGYG 111
Query: 297 VPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
+C+ CG GH SR E V CYNCG GH++R+C
Sbjct: 112 GGAGKTCYSCGGYGHM-------------SR-ECVNG--MKCYNCGESGHYSRDC 150
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 58/151 (38%), Gaps = 40/151 (26%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
C+ C GH+A+DCP K C CG GH C + D K CY C
Sbjct: 9 CYSCGNAGHQARDCPTK------GPAKCYNCGGEGHLSRDCTEP--MKDNKS--CYKCGQ 58
Query: 285 FGHLCCVNISDAVPGE---------VSCFRCGQLGHTGLHWNSCMQACARS--------- 326
GH IS P C++CG+ GH ++C +S
Sbjct: 59 PGH-----ISRDCPQAGAAGGGQAGTECYKCGEKGHI-------ARSCPKSGFGGNSYGG 106
Query: 327 RGETVEASPSSCYNCGAEGHFARECVSSSKV 357
+ +CY+CG GH +RECV+ K
Sbjct: 107 NSGYGGGAGKTCYSCGGYGHMSRECVNGMKC 137
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA-----QDCFICKKGGHRA 235
+TCY+CG GHM+ C + +K C+ CG H R C K + C+ C++GGH
Sbjct: 116 KTCYSCGGYGHMSRECVNGMK----CYNCGESGHYSRDCPKEAAGGEKICYKCQQGGHVQ 171
Query: 236 KDCPD 240
CP+
Sbjct: 172 AQCPN 176
>gi|336273387|ref|XP_003351448.1| hypothetical protein SMAC_07647 [Sordaria macrospora k-hell]
gi|380089245|emb|CCC12804.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 227
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 75/199 (37%), Gaps = 42/199 (21%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
+ CY CGE GH A C S + C+ C H +C ++A+ C+ C+ GH
Sbjct: 7 RACYKCGELGHHAEACSSPHRL---CYNCKQPNHESSECPLPRSTEAKQCYHCQGLGHVQ 63
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYS-----------------------LD 272
DCP SG + C CG GH M +C N + +
Sbjct: 64 ADCPTLRISGAGSTSRCYNCGQPGHYMRACPNPPTGGMPQRGVPVGRGGFGGFGRGGFVG 123
Query: 273 DLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVE 332
+ CY C H D + C+ CG+LGH + C G +
Sbjct: 124 GARPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHIS-------RDCTAPNGGPLN 172
Query: 333 ASPSSCYNCGAEGHFAREC 351
+ +CY C GH +R+C
Sbjct: 173 TAGKTCYQCSETGHISRDC 191
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 12/69 (17%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK---------AQDCFICKKGG 232
TCY CG H A +C++ + C+ CG L H R C+ + C+ C + G
Sbjct: 129 TCYKCGGPNHFARDCQAQAMK---CYACGKLGHISRDCTAPNGGPLNTAGKTCYQCSETG 185
Query: 233 HRAKDCPDK 241
H ++DCP+K
Sbjct: 186 HISRDCPNK 194
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 43/114 (37%), Gaps = 29/114 (25%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP---------------------------CFVCGSLEHG 215
CYNCG+ GH C + P C+ CG H
Sbjct: 80 CYNCGQPGHYMRACPNPPTGGMPQRGVPVGRGGFGGFGRGGFVGGARPATCYKCGGPNHF 139
Query: 216 VRQC-SKAQDCFICKKGGHRAKDCPDKHKSGFQNA-QVCLKCGDSGHDMFSCRN 267
R C ++A C+ C K GH ++DC + A + C +C ++GH C N
Sbjct: 140 ARDCQAQAMKCYACGKLGHISRDCTAPNGGPLNTAGKTCYQCSETGHISRDCPN 193
>gi|440632924|gb|ELR02843.1| hypothetical protein GMDG_05776 [Geomyces destructans 20631-21]
Length = 525
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Query: 183 CYNCGEEGHMAVNC---RSAVKRKKPCFVCGSLEHGVRQCSKAQ-------DCFICKKGG 232
C+NCGE+GHM +C R+ + C+ CG + H C Q C +C+ G
Sbjct: 45 CFNCGEQGHMKGDCPNPRAGGQLAGECYNCGEVGHNKADCPNPQVPREFTGTCRVCEAVG 104
Query: 233 HRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
HRA DCP ++C CGD GH + +C N +D
Sbjct: 105 HRASDCPTA------GPKLCKNCGDEGHTITACTNPRKID 138
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 67/181 (37%), Gaps = 44/181 (24%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNC----RSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKK 230
P RG C NC E GH+ +C R + R + CF C +
Sbjct: 258 PVPRGIPKCNNCNEMGHITKSCPEEKREVLDR------------------ASVTCFNCNE 299
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCC 290
GHR +DC + F C C SGH C S + V+C C GH
Sbjct: 300 TGHRMRDCHKPREDRF----ACRNCKQSGHSSKECTEPRSAEG---VECKNCNEMGHF-S 351
Query: 291 VNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARE 350
+ G +C CGQ GH RS+ + E +C NC +GH ++E
Sbjct: 352 RDCPTGGGGGGACHNCGQEGH-------------RSK-DCTEPRVPTCRNCDEKGHISKE 397
Query: 351 C 351
C
Sbjct: 398 C 398
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 59/146 (40%), Gaps = 25/146 (17%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ-----DCFICKKG 231
DR TC+NC E GH +C + + C C H ++C++ + +C C +
Sbjct: 288 DRASVTCFNCNETGHRMRDCHKPREDRFACRNCKQSGHSSKECTEPRSAEGVECKNCNEM 347
Query: 232 GHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCV 291
GH ++DCP +G C CG GH C + + C C GH
Sbjct: 348 GHFSRDCP----TGGGGGGACHNCGQEGHRSKDC------TEPRVPTCRNCDEKGH---- 393
Query: 292 NISDAVP-----GEVSCFRCGQLGHT 312
IS P + C C Q+GHT
Sbjct: 394 -ISKECPKPRDYSRIQCSNCQQMGHT 418
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 47/138 (34%), Gaps = 40/138 (28%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
CF C + GH DCP+ ++G Q A C CG+ GH+ C N + C +C
Sbjct: 45 CFNCGEQGHMKGDCPNP-RAGGQLAGECYNCGEVGHNKADCPNPQVPREFTGT-CRVCEA 102
Query: 285 FGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAE 344
GH + A P C NCG E
Sbjct: 103 VGH--------------------------------------RASDCPTAGPKLCKNCGDE 124
Query: 345 GHFARECVSSSKVRKRNI 362
GH C + K+ + NI
Sbjct: 125 GHTITACTNPRKIDRSNI 142
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 50/140 (35%), Gaps = 17/140 (12%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQV-CLKCGDSGHDMFSCRNSYSLDDLKEVQCYICR 283
C C + GH K CP++ + A V C C ++GH M C C C+
Sbjct: 266 CNNCNEMGHITKSCPEEKREVLDRASVTCFNCNETGHRMRDCHKPRE----DRFACRNCK 321
Query: 284 CFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGA 343
GH V C C ++GH T +C+NCG
Sbjct: 322 QSGHSSKECTEPRSAEGVECKNCNEMGHFSRDC------------PTGGGGGGACHNCGQ 369
Query: 344 EGHFARECVSSSKVRKRNID 363
EGH +++C RN D
Sbjct: 370 EGHRSKDCTEPRVPTCRNCD 389
>gi|46111529|ref|XP_382822.1| hypothetical protein FG02646.1 [Gibberella zeae PH-1]
gi|408400341|gb|EKJ79423.1| hypothetical protein FPSE_00354 [Fusarium pseudograminearum CS3096]
Length = 236
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 74/200 (37%), Gaps = 43/200 (21%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
+ CY CG GH A C SA ++ C+ C H C ++A+ C+ C+ GH
Sbjct: 7 RACYKCGNVGHYAEVCSSA---ERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQ 63
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDL--------------------- 274
DCP SG + C CG GH +C N +
Sbjct: 64 ADCPTLRLSGTGTSGRCYNCGQPGHLARACPNPVGPGPMGRGAPMGRGGFPGGYGRGGFA 123
Query: 275 ---KEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETV 331
+ CY C H D + C+ CG+LGH + C G +
Sbjct: 124 GGPRPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI-------SRDCTAPNGGPL 172
Query: 332 EASPSSCYNCGAEGHFAREC 351
+ +CY CG GH +R+C
Sbjct: 173 NTAGKTCYQCGEAGHISRDC 192
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 12/69 (17%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK---------AQDCFICKKGG 232
TCY CG H A +C++ + C+ CG L H R C+ + C+ C + G
Sbjct: 130 TCYKCGGPNHFARDCQAQAMK---CYACGKLGHISRDCTAPNGGPLNTAGKTCYQCGEAG 186
Query: 233 HRAKDCPDK 241
H ++DCP K
Sbjct: 187 HISRDCPQK 195
>gi|335306205|ref|XP_001926395.3| PREDICTED: cellular nucleic acid-binding protein-like [Sus scrofa]
Length = 171
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 76/189 (40%), Gaps = 49/189 (25%)
Query: 183 CYNCGEEGHMAVNCR-------------------SAVKRKKPCFVCGSLEHGVRQCSKAQ 223
C+ CG GH A C S+ C+ CG H + C +
Sbjct: 6 CFKCGRSGHWARGCPKGGGARGRGSRGRGRGPHCSSTTLPIICYRCGEPGHHAKNCDLQE 65
Query: 224 D-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYIC 282
D C+ C K GH AKDC + + + Q C CG GH C D +E +CY C
Sbjct: 66 DICYNCGKSGHIAKDCMEPKR---ERDQCCYTCGRPGHLARDC------DRQEEQKCYSC 116
Query: 283 RCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCG 342
GH+ D +V C+RCG+ GH ++ + + S +CY CG
Sbjct: 117 GERGHI----QKDCT--QVRCYRCGETGHVAINCS--------------KPSEVNCYRCG 156
Query: 343 AEGHFAREC 351
GH AREC
Sbjct: 157 ESGHLAREC 165
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
Q CY CG GH+A +C ++K C+ CG H + C++ + C+ C + GH A +C
Sbjct: 90 QCCYTCGRPGHLARDCDRQEEQK--CYSCGERGHIQKDCTQVR-CYRCGETGHVAINCSK 146
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSC 265
+ C +CG+SGH C
Sbjct: 147 PSEVN------CYRCGESGHLAREC 165
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 7/61 (11%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD--CFICKKGGHRAKDC 238
Q CY+CGE GH+ +C + V+ C+ CG H CSK + C+ C + GH A++C
Sbjct: 111 QKCYSCGERGHIQKDC-TQVR----CYRCGETGHVAINCSKPSEVNCYRCGESGHLAREC 165
Query: 239 P 239
P
Sbjct: 166 P 166
>gi|213404984|ref|XP_002173264.1| cellular nucleic acid-binding protein [Schizosaccharomyces
japonicus yFS275]
gi|212001311|gb|EEB06971.1| cellular nucleic acid-binding protein [Schizosaccharomyces
japonicus yFS275]
Length = 175
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 79/198 (39%), Gaps = 51/198 (25%)
Query: 169 GPRYFDPPDRGWQT--------CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCS 220
GPR ++ + G Q CYNC + GH A C S +R+K C+ CG+
Sbjct: 13 GPRCYNCNEIGHQARECVKGSICYNCNQTGHKANEC-SEPQREKACYNCGTA-------- 63
Query: 221 KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLK----E 276
GH +DCP + NA+ C KCG GH +CR S +
Sbjct: 64 -----------GHLVRDCPTAPPNPRANAE-CYKCGRVGHIARACRTSGPAAGGRPGRSN 111
Query: 277 VQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPS 336
+ CY C FGH D G V C+ CG+ GH C +S G +
Sbjct: 112 LNCYACGSFGH----QARDCTQG-VKCYSCGKTGHRSFE-------CEQSGGGQL----- 154
Query: 337 SCYNCGAEGHFARECVSS 354
CY C GH A +C +
Sbjct: 155 -CYKCNQPGHIAVDCAQA 171
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 50/108 (46%), Gaps = 13/108 (12%)
Query: 166 LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSA--VKRKKP------CFVCGSLEHGVR 217
L+R P R CY CG GH+A CR++ +P C+ CGS H R
Sbjct: 66 LVRDCPTAPPNPRANAECYKCGRVGHIARACRTSGPAAGGRPGRSNLNCYACGSFGHQAR 125
Query: 218 QCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
C++ C+ C K GHR+ +C +SG Q+C KC GH C
Sbjct: 126 DCTQGVKCYSCGKTGHRSFEC---EQSG--GGQLCYKCNQPGHIAVDC 168
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 61/159 (38%), Gaps = 48/159 (30%)
Query: 206 CFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
C+ C + H R+C K C+ C + GH+A +C + Q + C CG +GH + C
Sbjct: 16 CYNCNEIGHQARECVKGSICYNCNQTGHKANECSEP-----QREKACYNCGTAGHLVRDC 70
Query: 266 RNSYSLDDLKEVQCYICRCFGHLCCVNISDAVP---GEVSCFRCGQLGHTGLHWNSCMQA 322
A P C++CG++GH +A
Sbjct: 71 ----------------------------PTAPPNPRANAECYKCGRVGHI-------ARA 95
Query: 323 CARSRGETVEASPS----SCYNCGAEGHFARECVSSSKV 357
C R+ G P +CY CG+ GH AR+C K
Sbjct: 96 C-RTSGPAAGGRPGRSNLNCYACGSFGHQARDCTQGVKC 133
>gi|429849218|gb|ELA24622.1| zinc knuckle domain protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 185
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 68/160 (42%), Gaps = 31/160 (19%)
Query: 176 PDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC----------SKAQDC 225
P+RG CYNCG EGHM+ +C K K C+ CG H R C + + +C
Sbjct: 28 PNRGAAKCYNCGNEGHMSRDCPEGPKDTKSCYRCGQAGHISRDCPQGGNVGGGGASSSEC 87
Query: 226 FICKKGGHRAKDCPDK-----------HKSGFQNA--QVCLKCGDSGHDMFSCRNSYSLD 272
+ C + GH A++CP + G+ A + C CG GH C N
Sbjct: 88 YKCGEVGHIARNCPKSGGGYGGGGACYNSGGYGGASQKTCYSCGGYGHMSRDCTNG---- 143
Query: 273 DLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHT 312
+CY C GH ++ GE C++C Q GH
Sbjct: 144 ----SKCYNCGENGHFSRDCPKESSGGEKICYKCQQPGHV 179
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 78/189 (41%), Gaps = 42/189 (22%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNC--RSAVKRKKPCFVCGSLEHGVRQCSKA----QDCFIC 228
PP R TC+ CG GH A C R A K C+ CG+ H R C + + C+ C
Sbjct: 9 PPAR---TCFTCGAAGHQARECPNRGAAK----CYNCGNEGHMSRDCPEGPKDTKSCYRC 61
Query: 229 KKGGHRAKDCPDKHKSGFQNAQV--CLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFG 286
+ GH ++DCP G A C KCG+ GH +C S CY +G
Sbjct: 62 GQAGHISRDCPQGGNVGGGGASSSECYKCGEVGHIARNCPKSGGGYGGGGA-CYNSGGYG 120
Query: 287 HLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGH 346
+ +C+ CG GH SR T + S CYNCG GH
Sbjct: 121 GA----------SQKTCYSCGGYGHM-------------SRDCT---NGSKCYNCGENGH 154
Query: 347 FARECVSSS 355
F+R+C S
Sbjct: 155 FSRDCPKES 163
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 69/168 (41%), Gaps = 35/168 (20%)
Query: 198 SAVKRKKPCFVCGSLEHGVRQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKC 255
SA + CF CG+ H R+C A C+ C GH ++DCP+ G ++ + C +C
Sbjct: 6 SAAPPARTCFTCGAAGHQARECPNRGAAKCYNCGNEGHMSRDCPE----GPKDTKSCYRC 61
Query: 256 GDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLH 315
G +GH C ++ C++CG++GH +
Sbjct: 62 GQAGHISRDCPQGGNVGGGGAS----------------------SSECYKCGEVGHIARN 99
Query: 316 W------NSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKV 357
AC S G AS +CY+CG GH +R+C + SK
Sbjct: 100 CPKSGGGYGGGGACYNSGGYG-GASQKTCYSCGGYGHMSRDCTNGSKC 146
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 20/102 (19%)
Query: 183 CYNCGEEGHMAVNCRSAVKR-----------------KKPCFVCGSLEHGVRQCSKAQDC 225
CY CGE GH+A NC + +K C+ CG H R C+ C
Sbjct: 87 CYKCGEVGHIARNCPKSGGGYGGGGACYNSGGYGGASQKTCYSCGGYGHMSRDCTNGSKC 146
Query: 226 FICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
+ C + GH ++DCP + G ++C KC GH C N
Sbjct: 147 YNCGENGHFSRDCPKESSGG---EKICYKCQQPGHVQSQCPN 185
>gi|358395603|gb|EHK44990.1| hypothetical protein TRIATDRAFT_166172, partial [Trichoderma
atroviride IMI 206040]
Length = 404
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 71/175 (40%), Gaps = 34/175 (19%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAK 236
DRG CYNC E H + C +EH + C+ C GHR +
Sbjct: 231 DRGLPKCYNCSELSHTSKACTQE-----------RVEHASEK--PKISCYNCGNEGHRVR 277
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDA 296
DCP+ F C CG SGH + C ++D+ V+C C GH + D
Sbjct: 278 DCPEPRVDKF----ACKNCGKSGHKIAECPEPPNMDN---VECRKCNKTGHF-AKDCPDG 329
Query: 297 VPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
G +C CGQ GH + C + R + +C NC GH+++EC
Sbjct: 330 --GSRACRNCGQEGHIS-------KDCDQPRNMDL----VTCRNCEETGHYSKEC 371
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 57/132 (43%), Gaps = 32/132 (24%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ-----DCFICKKGGHRAK 236
+CYNCG EGH +C K C CG H + +C + +C C K GH AK
Sbjct: 265 SCYNCGNEGHRVRDCPEPRVDKFACKNCGKSGHKIAECPEPPNMDNVECRKCNKTGHFAK 324
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGH-----------DMFSCRNS-----YSLD-----DLK 275
DCPD ++ C CG GH D+ +CRN YS + D
Sbjct: 325 DCPDG------GSRACRNCGQEGHISKDCDQPRNMDLVTCRNCEETGHYSKECPKPRDWS 378
Query: 276 EVQCYICRCFGH 287
+VQC C +GH
Sbjct: 379 KVQCTNCEEYGH 390
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 40/99 (40%), Gaps = 27/99 (27%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
D + G C+ CGEEGH C +A +AQ C CKK GH
Sbjct: 37 DAGEYGNDKCFGCGEEGHRRAECPNA---------------------EAQTCRYCKKEGH 75
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
KDCPDK C CG+ GH C N+ ++
Sbjct: 76 MVKDCPDKP------PMTCGNCGEEGHFRKDCENARKVN 108
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 299 GEVSCFRCGQLGHTGLHW-NSCMQAC--ARSRGETV----EASPSSCYNCGAEGHFAREC 351
G CF CG+ GH N+ Q C + G V + P +C NCG EGHF ++C
Sbjct: 42 GNDKCFGCGEEGHRRAECPNAEAQTCRYCKKEGHMVKDCPDKPPMTCGNCGEEGHFRKDC 101
Query: 352 VSSSKVRKRNIDASTP 367
++ KV + ++ +TP
Sbjct: 102 ENARKVNRDHVADTTP 117
>gi|402077536|gb|EJT72885.1| zinc finger protein GIS2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 259
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 73/200 (36%), Gaps = 43/200 (21%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
+ CY CG GH A C SA ++ C+ C H C ++A+ C+ C+ GH
Sbjct: 39 RACYKCGNVGHYAEVCSSA---ERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQ 95
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD----------------------- 272
DCP SG C CG GH +C N +
Sbjct: 96 ADCPTLRLSGAGAGGRCYNCGQPGHLARACPNPAGANMGRGAPVPRGGFTGGFPQRGGFA 155
Query: 273 -DLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETV 331
+ CY C H D + C+ CG+LGH + C G +
Sbjct: 156 GGPRPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI-------SRDCTAPNGGPL 204
Query: 332 EASPSSCYNCGAEGHFAREC 351
+ +CY CG GH +R+C
Sbjct: 205 NTAGKTCYQCGEAGHISRDC 224
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 12/70 (17%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK---------AQDCFICKKGG 232
TCY CG H A +C++ + C+ CG L H R C+ + C+ C + G
Sbjct: 162 TCYKCGGPNHFARDCQAQAMK---CYACGKLGHISRDCTAPNGGPLNTAGKTCYQCGEAG 218
Query: 233 HRAKDCPDKH 242
H ++DCP K+
Sbjct: 219 HISRDCPQKN 228
>gi|146104184|ref|XP_001469753.1| putative poly-zinc finger protein 2 [Leishmania infantum JPCM5]
gi|398024250|ref|XP_003865286.1| poly-zinc finger protein 2, putative [Leishmania donovani]
gi|134074123|emb|CAM72865.1| putative poly-zinc finger protein 2 [Leishmania infantum JPCM5]
gi|322503523|emb|CBZ38609.1| poly-zinc finger protein 2, putative [Leishmania donovani]
Length = 135
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 59/138 (42%), Gaps = 18/138 (13%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
CY CG GH + C SA PCF CG H ++C ++ CF C+K GHRA
Sbjct: 1 MVCYRCGGVGHQSRECTSAAD-SAPCFRCGKPGHVAKECVSTITAEEAPCFYCQKPGHRA 59
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL--CCVNI 293
+DCP+ +C C GH C N CY+C GH+ C
Sbjct: 60 RDCPEAPPK--SETVMCYNCSQKGHIASECTN--------PAHCYLCNEDGHIGRSCPTA 109
Query: 294 SDAVPGEVSCFRCGQLGH 311
+ +C +CG+ GH
Sbjct: 110 PKRSAADKTCRKCGKKGH 127
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 62/149 (41%), Gaps = 22/149 (14%)
Query: 206 CFVCGSLEHGVRQCSKAQD---CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDM 262
C+ CG + H R+C+ A D CF C K GH AK+C + C C GH
Sbjct: 3 CYRCGGVGHQSRECTSAADSAPCFRCGKPGHVAKECVSTITA---EEAPCFYCQKPGHRA 59
Query: 263 FSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQA 322
C + + V CY C GH I+ C+ C + GH G SC A
Sbjct: 60 RDCPEAPPKSET--VMCYNCSQKGH-----IASECTNPAHCYLCNEDGHIG---RSCPTA 109
Query: 323 CARSRGETVEASPSSCYNCGAEGHFAREC 351
RS A+ +C CG +GH ++C
Sbjct: 110 PKRS------AADKTCRKCGKKGHLRKDC 132
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 42/102 (41%), Gaps = 15/102 (14%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFD----PPDRGWQTCYNCGEEGHMAVNCRSAVKRKKP 205
E V+T+ + G R D PP CYNC ++GH+A C +
Sbjct: 37 ECVSTITAEEAPCFYCQKPGHRARDCPEAPPKSETVMCYNCSQKGHIASECTNPAH---- 92
Query: 206 CFVCGSLEHGVRQCSKA-------QDCFICKKGGHRAKDCPD 240
C++C H R C A + C C K GH KDCPD
Sbjct: 93 CYLCNEDGHIGRSCPTAPKRSAADKTCRKCGKKGHLRKDCPD 134
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 53/136 (38%), Gaps = 28/136 (20%)
Query: 250 QVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQL 309
VC +CG GH C ++ C+ C GH+ +S E CF C +
Sbjct: 1 MVCYRCGGVGHQSRECTSA-----ADSAPCFRCGKPGHVAKECVSTITAEEAPCFYCQKP 55
Query: 310 GHTGLHWNSCMQACARSRGETVEASPSS----CYNCGAEGHFARECVSSSKVRKRNIDA- 364
GH R+R + EA P S CYNC +GH A EC + + N D
Sbjct: 56 GH-------------RAR-DCPEAPPKSETVMCYNCSQKGHIASECTNPAHCYLCNEDGH 101
Query: 365 ---STPTFRPHRENKD 377
S PT P R D
Sbjct: 102 IGRSCPTA-PKRSAAD 116
>gi|70991320|ref|XP_750509.1| zinc knuckle domain protein (Byr3) [Aspergillus fumigatus Af293]
gi|66848141|gb|EAL88471.1| zinc knuckle domain protein (Byr3), putative [Aspergillus fumigatus
Af293]
gi|159130982|gb|EDP56095.1| zinc knuckle domain protein (Byr3), putative [Aspergillus fumigatus
A1163]
Length = 190
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 16/107 (14%)
Query: 173 FDPPDRGWQTCYNCGEEGHMAVNC------------RSAVKRKKPCFVCGSLEHGVRQCS 220
++ G Q CY CG+ GH+A NC R++ C+ CG H R C+
Sbjct: 88 YNGAPSGGQECYKCGQVGHIARNCSQGGNYGGGFGHGGYGGRQQTCYSCGGFGHMARDCT 147
Query: 221 KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
Q C+ C GH ++DCP + K +VC KC GH +C N
Sbjct: 148 HGQKCYNCGDVGHVSRDCPTEAK----GERVCYKCKQPGHVQAACPN 190
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 74/189 (39%), Gaps = 43/189 (22%)
Query: 174 DPPDRGWQTCYNCGE---EGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKK 230
D P +G TCYNCG +GH++ C A K +K C+ CG H R+CS+A
Sbjct: 32 DCPKKGTPTCYNCGATIGQGHVSRECTVAPK-EKSCYRCGVAGHISRECSQAGS------ 84
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN--------SYSLDDLKEVQCYIC 282
D + Q C KCG GH +C + ++ CY C
Sbjct: 85 --------GDNYNGAPSGGQECYKCGQVGHIARNCSQGGNYGGGFGHGGYGGRQQTCYSC 136
Query: 283 RCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCG 342
FGH+ D G+ C+ CG +GH + ++GE V CY C
Sbjct: 137 GGFGHM----ARDCTHGQ-KCYNCGDVGHVSRDCPT------EAKGERV------CYKCK 179
Query: 343 AEGHFAREC 351
GH C
Sbjct: 180 QPGHVQAAC 188
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 53/136 (38%), Gaps = 22/136 (16%)
Query: 233 HRAKDCPDKHKSGFQNAQVCLKCGDS---GHDMFSCRNSYSLDDLKEVQCYICRCFGHLC 289
H+A+DCP K C CG + GH C + KE CY C GH+
Sbjct: 28 HQARDCPKK------GTPTCYNCGATIGQGHVSRECTVA-----PKEKSCYRCGVAGHIS 76
Query: 290 --CV------NISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNC 341
C N + A G C++CGQ+GH + + +CY+C
Sbjct: 77 RECSQAGSGDNYNGAPSGGQECYKCGQVGHIARNCSQGGNYGGGFGHGGYGGRQQTCYSC 136
Query: 342 GAEGHFARECVSSSKV 357
G GH AR+C K
Sbjct: 137 GGFGHMARDCTHGQKC 152
>gi|388501938|gb|AFK39035.1| unknown [Medicago truncatula]
Length = 220
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 11/115 (9%)
Query: 206 CFVCGSLEHGVRQCS------KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSG 259
CF+C L+H + C+ K + C C++ GHRA++CPD ++ + C CGD+G
Sbjct: 69 CFICKGLDHIAKFCTQKAEWEKNKICLRCRRRGHRAQNCPDGGSK--EDFKYCYNCGDNG 126
Query: 260 HDMFSCRNSYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
H + +C + QC++C+ GHL C N P C CG + H
Sbjct: 127 HSLANCPHPLQEGGTMFAQCFVCKEQGHLSKNCPKNAHGIYPKGGCCKICGGVTH 181
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 48/104 (46%), Gaps = 16/104 (15%)
Query: 159 DNIVLRKLLRGPRYFDPPDRG----WQTCYNCGEEGHMAVNCRSAVKRK----KPCFVCG 210
+ I LR RG R + PD G ++ CYNCG+ GH NC ++ CFVC
Sbjct: 91 NKICLRCRRRGHRAQNCPDGGSKEDFKYCYNCGDNGHSLANCPHPLQEGGTMFAQCFVCK 150
Query: 211 SLEHGVRQCSKAQD--------CFICKKGGHRAKDCPDKHKSGF 246
H + C K C IC H A+DCPDK ++GF
Sbjct: 151 EQGHLSKNCPKNAHGIYPKGGCCKICGGVTHLARDCPDKGQNGF 194
>gi|294942030|ref|XP_002783361.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239895776|gb|EER15157.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 135
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 54/112 (48%), Gaps = 13/112 (11%)
Query: 170 PRYFDPPDRGW---QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA--QD 224
PR FD R Q CYNCG+ H+A +C +PCF C + H R C A ++
Sbjct: 24 PRQFDDDSRARRRPQNCYNCGQPDHLARDCPKDQSNDRPCFKCQQVGHFARDCPSADTRN 83
Query: 225 CFICKKGGHRAKDCP--------DKHKSGFQNAQVCLKCGDSGHDMFSCRNS 268
CF C + GH A++CP + + G + C CG GH +CRNS
Sbjct: 84 CFRCGQSGHLARECPNEENNQDNNNNNRGGGGGRNCFHCGKPGHLARNCRNS 135
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 17/91 (18%)
Query: 181 QTCYNCGEEGHMAVNC-------RSAVKRKKPCFVCGSLEHGVRQCSKAQD----CFICK 229
Q C+ C E GH A NC A +R + C+ CG +H R C K Q CF C+
Sbjct: 8 QACFICNETGHYARNCPRQFDDDSRARRRPQNCYNCGQPDHLARDCPKDQSNDRPCFKCQ 67
Query: 230 KGGHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
+ GH A+DCP + + C +CG SGH
Sbjct: 68 QVGHFARDCPSA------DTRNCFRCGQSGH 92
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 57/139 (41%), Gaps = 12/139 (8%)
Query: 220 SKAQDCFICKKGGHRAKDCP---DKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKE 276
+ +Q CFIC + GH A++CP D + Q C CG H C D +
Sbjct: 5 APSQACFICNETGHYARNCPRQFDDDSRARRRPQNCYNCGQPDHLARDC----PKDQSND 60
Query: 277 VQCYICRCFGHLCCVNISDAVPGEV-SCFRCGQLGHTGLHWNSCMQACARSRGETVEASP 335
C+ C+ GH D + +CFRCGQ GH + +
Sbjct: 61 RPCFKCQQVGHF----ARDCPSADTRNCFRCGQSGHLARECPNEENNQDNNNNNRGGGGG 116
Query: 336 SSCYNCGAEGHFARECVSS 354
+C++CG GH AR C +S
Sbjct: 117 RNCFHCGKPGHLARNCRNS 135
>gi|157876790|ref|XP_001686737.1| putative poly-zinc finger protein 2 [Leishmania major strain
Friedlin]
gi|68129812|emb|CAJ09118.1| putative poly-zinc finger protein 2 [Leishmania major strain
Friedlin]
Length = 135
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 59/138 (42%), Gaps = 18/138 (13%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
CY CG GH + C SA PCF CG H R+C ++ CF C+K GHRA
Sbjct: 1 MVCYRCGGVGHQSRECTSAAD-SAPCFRCGKPGHVARECVSTITAEEAPCFYCQKPGHRA 59
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL--CCVNI 293
++CP+ +C C GH C N CY+C GH+ C
Sbjct: 60 RECPEAPPK--SETVICYNCSQKGHIASECTNP--------AHCYLCNEDGHIGRSCPTA 109
Query: 294 SDAVPGEVSCFRCGQLGH 311
+ +C +CG+ GH
Sbjct: 110 PKRSVADKTCRKCGRKGH 127
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 61/149 (40%), Gaps = 22/149 (14%)
Query: 206 CFVCGSLEHGVRQCSKAQD---CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDM 262
C+ CG + H R+C+ A D CF C K GH A++C + C C GH
Sbjct: 3 CYRCGGVGHQSRECTSAADSAPCFRCGKPGHVARECVSTITA---EEAPCFYCQKPGHRA 59
Query: 263 FSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQA 322
C + + V CY C GH I+ C+ C + GH G SC A
Sbjct: 60 RECPEAPPKSET--VICYNCSQKGH-----IASECTNPAHCYLCNEDGHIG---RSCPTA 109
Query: 323 CARSRGETVEASPSSCYNCGAEGHFAREC 351
RS + +C CG +GH ++C
Sbjct: 110 PKRSVAD------KTCRKCGRKGHLRKDC 132
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 47/118 (39%), Gaps = 23/118 (19%)
Query: 250 QVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQL 309
VC +CG GH C ++ C+ C GH+ +S E CF C +
Sbjct: 1 MVCYRCGGVGHQSRECTSA-----ADSAPCFRCGKPGHVARECVSTITAEEAPCFYCQKP 55
Query: 310 GHTGLHWNSCMQACARSRGETVEASPSS----CYNCGAEGHFARECVSSSKVRKRNID 363
GH R+R E EA P S CYNC +GH A EC + + N D
Sbjct: 56 GH-------------RAR-ECPEAPPKSETVICYNCSQKGHIASECTNPAHCYLCNED 99
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 27/134 (20%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
C+ C GH++++C + ++ C +CG GH C ++ + + E C+ C+
Sbjct: 3 CYRCGGVGHQSREC-----TSAADSAPCFRCGKPGHVARECVSTITAE---EAPCFYCQK 54
Query: 285 FGHLCCVNISDAVPGE--VSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCG 342
GH +A P V C+ C Q GH + P+ CY C
Sbjct: 55 PGHRA-RECPEAPPKSETVICYNCSQKGHIASECTN----------------PAHCYLCN 97
Query: 343 AEGHFARECVSSSK 356
+GH R C ++ K
Sbjct: 98 EDGHIGRSCPTAPK 111
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 11/73 (15%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA-------QDCFI 227
PP CYNC ++GH+A C + C++C H R C A + C
Sbjct: 66 PPKSETVICYNCSQKGHIASECTNPAH----CYLCNEDGHIGRSCPTAPKRSVADKTCRK 121
Query: 228 CKKGGHRAKDCPD 240
C + GH KDCPD
Sbjct: 122 CGRKGHLRKDCPD 134
>gi|255082406|ref|XP_002504189.1| predicted protein [Micromonas sp. RCC299]
gi|226519457|gb|ACO65447.1| predicted protein [Micromonas sp. RCC299]
Length = 938
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 51/120 (42%), Gaps = 26/120 (21%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA------QDCFICKKGGHR 234
+TC+ CG GH+A C +A ++ C VCG H R C + + C +C + GH
Sbjct: 644 RTCHKCGMPGHIARECPNAPGEQRTCHVCGEGGHIARDCPQGPSRPEERACHVCGESGHL 703
Query: 235 AKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVN 292
A+DCP C CG GH C E +C C GH+ CVN
Sbjct: 704 ARDCPQS---------TCHNCGKPGHRAAEC---------PEARCRRCGEKGHMARDCVN 745
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 14/118 (11%)
Query: 247 QNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVPGEVSCF 304
Q + C KCG GH C N+ ++ C++C GH+ C + P E +C
Sbjct: 641 QAPRTCHKCGMPGHIARECPNAPG----EQRTCHVCGEGGHIARDCPQ-GPSRPEERACH 695
Query: 305 RCGQLGHTGLHWNSCMQA----CARSRGETVEASPSSCYNCGAEGHFARECVSSSKVR 358
CG+ GH C Q+ C + E + C CG +GH AR+CV+ R
Sbjct: 696 VCGESGHLA---RDCPQSTCHNCGKPGHRAAECPEARCRRCGEKGHMARDCVNPPMSR 750
>gi|384247042|gb|EIE20530.1| hypothetical protein COCSUDRAFT_10924, partial [Coccomyxa
subellipsoidea C-169]
Length = 102
Score = 60.8 bits (146), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 52/131 (39%), Gaps = 32/131 (24%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C+ CG +GHMA +C + +R++PC +CG H QCS C C+ G
Sbjct: 1 CFKCGGQGHMARDCPNE-ERQRPCHLCGQFGHTRYQCSNTLLCIHCRAEG---------- 49
Query: 243 KSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVS 302
C Y DL++ C C GHLCC P + S
Sbjct: 50 ---------------------GCTGEYLEGDLRQALCVACGRRGHLCCQLAEGLPPRKTS 88
Query: 303 CFRCGQLGHTG 313
C+ CG+ GH
Sbjct: 89 CYNCGEGGHVA 99
>gi|409050450|gb|EKM59927.1| hypothetical protein PHACADRAFT_250735 [Phanerochaete carnosa
HHB-10118-sp]
Length = 697
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 49/107 (45%), Gaps = 17/107 (15%)
Query: 171 RYFDPPDRGWQ------TCYNCGEEG-HMAVNCRSAVKRKKPCFVCGSL-EHGVRQCSKA 222
RYFD P G + C CG EG H NC + C CG EHG R C +
Sbjct: 298 RYFDDPADGTEPKTAKIVCKKCGAEGDHKTWNCPVII-----CLTCGVRNEHGTRSCPIS 352
Query: 223 QDCFICKKGGHRAKDCPDKH----KSGFQNAQVCLKCGDSGHDMFSC 265
+ CF C GH +DCP+++ + G N C +CG S H + C
Sbjct: 353 KVCFTCGMKGHINRDCPNRYAGRARMGGSNFDDCDRCGSSLHQINEC 399
>gi|426257255|ref|XP_004022245.1| PREDICTED: cellular nucleic acid-binding protein-like [Ovis aries]
Length = 170
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 75/188 (39%), Gaps = 48/188 (25%)
Query: 183 CYNCGEEGHMAVNCR------------------SAVKRKKPCFVCGSLEHGVRQCSKAQD 224
C+ CG GH A C S+ C+ CG H + C D
Sbjct: 6 CFKCGRIGHWARGCSRGGARGRGARGRGRGAQCSSTTLPVICYRCGESGHHAKDCDLLDD 65
Query: 225 -CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICR 283
C+ C K GH AKDC + + G + C CG GH C D +E +CY C
Sbjct: 66 ICYNCGKSGHIAKDCAEPKREG---ERCCYTCGRPGHLARDC------DHQEEQKCYSCG 116
Query: 284 CFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGA 343
GH+ D +V C+RCG++GH ++ + S +CY CG
Sbjct: 117 KRGHI----QKDCT--QVKCYRCGEIGHVAINCR--------------KMSEVNCYRCGE 156
Query: 344 EGHFAREC 351
GH AREC
Sbjct: 157 SGHLAREC 164
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 48/116 (41%), Gaps = 38/116 (32%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P G + CY CG GH+A +C +H + Q C+ C K GH
Sbjct: 82 EPKREGERCCYTCGRPGHLARDC----------------DH-----QEEQKCYSCGKRGH 120
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
KDC QV C +CG+ GH +CR + EV CY C GHL
Sbjct: 121 IQKDC----------TQVKCYRCGEIGHVAINCRK------MSEVNCYRCGESGHL 160
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 7/61 (11%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD--CFICKKGGHRAKDC 238
Q CY+CG+ GH+ +C + VK C+ CG + H C K + C+ C + GH A++C
Sbjct: 110 QKCYSCGKRGHIQKDC-TQVK----CYRCGEIGHVAINCRKMSEVNCYRCGESGHLAREC 164
Query: 239 P 239
P
Sbjct: 165 P 165
>gi|347828527|emb|CCD44224.1| hypothetical protein [Botryotinia fuckeliana]
Length = 280
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 75/204 (36%), Gaps = 46/204 (22%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
+ CY CG GH A C SA ++ C+ C H C ++A+ C+ C+ GH
Sbjct: 60 RACYKCGNVGHYAEVCASA---ERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQ 116
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYS------------------------- 270
DCP SG C CG GH +C N +
Sbjct: 117 ADCPTLRISGAGTTGRCYNCGMPGHLARACPNPNNGMQGPPRGLGAPRGGFGGGFAPRGG 176
Query: 271 -LDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGE 329
+ CY C H D + C+ CG+ GH+ + C G
Sbjct: 177 FAGGPRPATCYKCGGPNHF----ARDCQAQAMKCYACGRTGHS-------SRECTSPNGG 225
Query: 330 TVEASPSSCYNCGAEGHFARECVS 353
+A +CY CG EGH AR+C S
Sbjct: 226 VNKAG-KTCYTCGTEGHIARDCPS 248
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 11/68 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCS--------KAQDCFICKKGGH 233
TCY CG H A +C++ + C+ CG H R+C+ + C+ C GH
Sbjct: 185 TCYKCGGPNHFARDCQAQAMK---CYACGRTGHSSRECTSPNGGVNKAGKTCYTCGTEGH 241
Query: 234 RAKDCPDK 241
A+DCP K
Sbjct: 242 IARDCPSK 249
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 45/123 (36%), Gaps = 31/123 (25%)
Query: 183 CYNCGEEGHMAVNCR------------------------------SAVKRKKPCFVCGSL 212
CYNCG GH+A C + R C+ CG
Sbjct: 133 CYNCGMPGHLARACPNPNNGMQGPPRGLGAPRGGFGGGFAPRGGFAGGPRPATCYKCGGP 192
Query: 213 EHGVRQC-SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSL 271
H R C ++A C+ C + GH +++C + + + C CG GH C +
Sbjct: 193 NHFARDCQAQAMKCYACGRTGHSSRECTSPNGGVNKAGKTCYTCGTEGHIARDCPSKGLN 252
Query: 272 DDL 274
D+L
Sbjct: 253 DNL 255
>gi|225470195|ref|XP_002268512.1| PREDICTED: uncharacterized protein LOC100242054 [Vitis vinifera]
Length = 401
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 206 CFVCGSLEHGVRQCS-KAQ-----DCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSG 259
CF+C + +H + C KAQ C +C++ GH K+CPDK + + ++C CG++G
Sbjct: 79 CFICKAKDHIAKHCPEKAQWERHKICLLCRQRGHSLKNCPDKGEEKL-DKKLCYNCGETG 137
Query: 260 HDMFSCRNSYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGHTG 313
H + +C K C+IC GHL C N P C CG + H
Sbjct: 138 HSLANCPQPLQEGGTKFASCFICNERGHLSKNCPKNSHGIYPKGGCCKICGGVTHLA 194
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 44/103 (42%), Gaps = 20/103 (19%)
Query: 176 PDRGWQ-----TCYNCGEEGHMAVNCRSAVK----RKKPCFVCGSLEHGVRQCSKAQD-- 224
PD+G + CYNCGE GH NC ++ + CF+C H + C K
Sbjct: 118 PDKGEEKLDKKLCYNCGETGHSLANCPQPLQEGGTKFASCFICNERGHLSKNCPKNSHGI 177
Query: 225 ------CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHD 261
C IC H AKDCP+K G N+ V G H+
Sbjct: 178 YPKGGCCKICGGVTHLAKDCPNK---GCNNSPVAAIAGGIKHE 217
>gi|114689169|ref|XP_529043.2| PREDICTED: zinc finger CCHC domain-containing protein 13 [Pan
troglodytes]
gi|397507945|ref|XP_003824438.1| PREDICTED: zinc finger CCHC domain-containing protein 13-like [Pan
paniscus]
Length = 170
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 61/124 (49%), Gaps = 25/124 (20%)
Query: 183 CYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQC--SKAQDCFICKKGGHRAKDCP 239
CYNCG GH+A +C+ + R++ C+ CG L H R C K Q C+ C K GH KDC
Sbjct: 67 CYNCGRSGHIAKDCKEPKRERRQHCYTCGRLGHLARDCDRQKEQKCYSCGKLGHIQKDC- 125
Query: 240 DKHKSGFQNAQV-CLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVP 298
AQV C +CG+ GH +C + + QCY C GHL + P
Sbjct: 126 ---------AQVKCYRCGEIGHVAINCSKT------RPGQCYRCGKSGHL-----AKECP 165
Query: 299 GEVS 302
EV+
Sbjct: 166 SEVT 169
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 71/172 (41%), Gaps = 51/172 (29%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
TCY CGE G A N R + C+ C + GH AKDC +
Sbjct: 46 TCYCCGESGRNAKN-RVLL---------------------GNICYNCGRSGHIAKDCKEP 83
Query: 242 HKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEV 301
+ + Q C CG GH C D KE +CY C GH+ +V
Sbjct: 84 KR---ERRQHCYTCGRLGHLARDC------DRQKEQKCYSCGKLGHI------QKDCAQV 128
Query: 302 SCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVS 353
C+RCG++GH ++ C+++R P CY CG GH A+EC S
Sbjct: 129 KCYRCGEIGHVAIN-------CSKTR-------PGQCYRCGKSGHLAKECPS 166
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ--DCFICKKGGHRAKDC 238
Q CY+CG+ GH+ +C + VK C+ CG + H CSK + C+ C K GH AK+C
Sbjct: 110 QKCYSCGKLGHIQKDC-AQVK----CYRCGEIGHVAINCSKTRPGQCYRCGKSGHLAKEC 164
Query: 239 PDK 241
P +
Sbjct: 165 PSE 167
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 9/87 (10%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CY CG GH+A +C ++++ C+ CG L H + C++ + C+ C + GH
Sbjct: 82 EPKRERRQHCYTCGRLGHLARDCDR--QKEQKCYSCGKLGHIQKDCAQVK-CYRCGEIGH 138
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGH 260
A +C K + G C +CG SGH
Sbjct: 139 VAINC-SKTRPG-----QCYRCGKSGH 159
>gi|336269017|ref|XP_003349270.1| hypothetical protein SMAC_05554 [Sordaria macrospora k-hell]
gi|380089843|emb|CCC12376.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 184
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 72/162 (44%), Gaps = 31/162 (19%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKAQ--------- 223
D P++G CYNCG EGHM+ +C K + C+ CG H R CS++
Sbjct: 24 DCPNKGAAKCYNCGNEGHMSRDCPEGPKDNARTCYRCGQTGHISRDCSQSGGQGGQSSGA 83
Query: 224 DCFICKKGGHRAKDCPD---KHKSGFQN----------AQVCLKCGDSGHDMFSCRNSYS 270
+C+ C + GH A++C + GFQN A+ C CG GH S
Sbjct: 84 ECYKCGEVGHIARNCSKGGAAYGGGFQNSGYGGGFGGPAKTCYSCGGIGH--------MS 135
Query: 271 LDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHT 312
D + +CY C GH D+ GE C++C Q GH
Sbjct: 136 RDCVNGSKCYNCGESGHFSRDCPKDSGSGEKICYKCQQPGHV 177
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 70/172 (40%), Gaps = 38/172 (22%)
Query: 199 AVKRKKPCFVCGSLEHGVRQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCG 256
A + + CF CG H R C A C+ C GH ++DCP+ K NA+ C +CG
Sbjct: 5 AAPQARACFTCGQTTHQARDCPNKGAAKCYNCGNEGHMSRDCPEGPK---DNARTCYRCG 61
Query: 257 DSGHDMFSCRNSYSLDDLKE-VQCYICRCFGHLC--CVNISDAVPGEV------------ 301
+GH C S +CY C GH+ C A G
Sbjct: 62 QTGHISRDCSQSGGQGGQSSGAECYKCGEVGHIARNCSKGGAAYGGGFQNSGYGGGFGGP 121
Query: 302 --SCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
+C+ CG +GH SR + V S CYNCG GHF+R+C
Sbjct: 122 AKTCYSCGGIGHM-------------SR-DCVNGS--KCYNCGESGHFSRDC 157
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 41/100 (41%), Gaps = 20/100 (20%)
Query: 183 CYNCGEEGHMAVNC-----------------RSAVKRKKPCFVCGSLEHGVRQCSKAQDC 225
CY CGE GH+A NC K C+ CG + H R C C
Sbjct: 85 CYKCGEVGHIARNCSKGGAAYGGGFQNSGYGGGFGGPAKTCYSCGGIGHMSRDCVNGSKC 144
Query: 226 FICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
+ C + GH ++DCP SG ++C KC GH C
Sbjct: 145 YNCGESGHFSRDCPKDSGSG---EKICYKCQQPGHVQSQC 181
>gi|426249733|ref|XP_004018604.1| PREDICTED: cellular nucleic acid-binding protein isoform 1 [Ovis
aries]
Length = 176
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 75/195 (38%), Gaps = 54/195 (27%)
Query: 183 CYNCGEEGHMAVNCRSA-----------------------VKRKKP--CFVCGSLEHGVR 217
C+ CG GH A C + V P C+ CG +
Sbjct: 6 CFKCGRSGHWARECPAGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGPPAK 65
Query: 218 QCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
+ C+ C +GGH AKDC + + + Q C CG GH C D E
Sbjct: 66 DWIRGGPCYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQ 116
Query: 278 QCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSS 337
+CY C FGH+ D +V C+RCG+ GH ++ + + S +
Sbjct: 117 KCYSCGEFGHI----QKDCT--KVKCYRCGETGHVAINCS--------------KTSEVN 156
Query: 338 CYNCGAEGHFARECV 352
CY CG GH AREC
Sbjct: 157 CYRCGESGHLARECT 171
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 57/120 (47%), Gaps = 21/120 (17%)
Query: 175 PPDRGW---QTCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFIC 228
PP + W CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C
Sbjct: 62 PPAKDWIRGGPCYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSC 121
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
+ GH KDC C +CG++GH +C + EV CY C GHL
Sbjct: 122 GEFGHIQKDC---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 166
>gi|304434516|dbj|BAJ15435.1| VASA-like gene [Mytilus galloprovincialis]
Length = 745
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 18/103 (17%)
Query: 183 CYNCGEEGHMAVNCRSAVKR-----KKPCFVCGSLEHGVRQCSKAQ---------DCFIC 228
C+ CGE GHM+ C SA + + CF C H R+C A+ +CF C
Sbjct: 148 CFKCGESGHMSRECPSAEQGGGGGGNRNCFKCNESGHMARECPNAEQGGGGGRSGNCFKC 207
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSL 271
++ GH A+DCP+ G C KC + GH C + L
Sbjct: 208 QESGHMARDCPNSDSKG----NACFKCNEGGHMARDCPKAEGL 246
>gi|429848776|gb|ELA24219.1| zinc knuckle domain containing protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 220
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 73/198 (36%), Gaps = 44/198 (22%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
+ CY CG GH A C SA ++ C+ C H C ++A+ C+ C+ GH
Sbjct: 7 RACYKCGNVGHYAEVCSSA---ERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQ 63
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD----------------------D 273
DCP SG + C CG GH +C N +
Sbjct: 64 ADCPTLRLSGAGTSGRCYNCGQPGHLARACPNPAGVGIGRGAPVPRGAFGGYGRGGFAGG 123
Query: 274 LKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEA 333
+ CY C H D + C+ CG+LGH C G +
Sbjct: 124 PRPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI----------CTAPNGGPLNT 169
Query: 334 SPSSCYNCGAEGHFAREC 351
+ +CY CG GH +R+C
Sbjct: 170 AGKTCYQCGEAGHISRDC 187
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEH------GVRQCSKAQDCFICKKGGHRA 235
TCY CG H A +C++ + C+ CG L H G + + C+ C + GH +
Sbjct: 128 TCYKCGGPNHFARDCQAQAMK---CYACGKLGHICTAPNGGPLNTAGKTCYQCGEAGHIS 184
Query: 236 KDCPDKHKSG 245
+DCP K+ +G
Sbjct: 185 RDCPQKNANG 194
>gi|343426719|emb|CBQ70247.1| related to GIS2-Putative zinc finger protein, proposed to be
involved in the RAS/cAMP signaling pathway [Sporisorium
reilianum SRZ2]
Length = 178
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 79/186 (42%), Gaps = 32/186 (17%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC---SKAQDCFICKKGGHRAKD 237
+TC+NCG+ GH A C +A C+ CG H QC ++ + C+ C + GH +++
Sbjct: 5 RTCFNCGQPGHNAAACPTAGNPS--CYNCGQQGHISSQCGMEAQPKTCYKCNETGHISRE 62
Query: 238 CPDKHK--SGFQNAQVCLKCGDSGHDMFSC-------RNSY-SLDDLKEVQCYICRCFGH 287
CP +G + C KCG GH +C R + CY C GH
Sbjct: 63 CPTNPAPVAGGPGGE-CYKCGQHGHIARACPTAGPSTRGGFGGAPRAGGRSCYNCGGVGH 121
Query: 288 LC--CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEG 345
L C + + A G C+ C + GH SR E + SCY CG EG
Sbjct: 122 LSRECTSPAGAAAGGQRCYNCNENGHI-------------SR-ECPKPQTKSCYRCGEEG 167
Query: 346 HFAREC 351
H + C
Sbjct: 168 HLSAAC 173
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 66/153 (43%), Gaps = 22/153 (14%)
Query: 176 PDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC---------SKAQDCF 226
P G +CYNCG++GH++ C + K C+ C H R+C +C+
Sbjct: 21 PTAGNPSCYNCGQQGHISSQCGMEAQPKT-CYKCNETGHISRECPTNPAPVAGGPGGECY 79
Query: 227 ICKKGGHRAKDCPDKHKS---GFQNA-----QVCLKCGDSGHDMFSCRNSYSLDDLKEVQ 278
C + GH A+ CP S GF A + C CG GH C + + +
Sbjct: 80 KCGQHGHIARACPTAGPSTRGGFGGAPRAGGRSCYNCGGVGHLSRECTSPAGAAAGGQ-R 138
Query: 279 CYICRCFGHLCCVNISDAVPGEVSCFRCGQLGH 311
CY C GH ++ P SC+RCG+ GH
Sbjct: 139 CYNCNENGH---ISRECPKPQTKSCYRCGEEGH 168
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 57/142 (40%), Gaps = 21/142 (14%)
Query: 223 QDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYIC 282
+ CF C + GH A CP C CG GH C + + CY C
Sbjct: 5 RTCFNCGQPGHNAAACPTAGNP------SCYNCGQQGHISSQCG-----MEAQPKTCYKC 53
Query: 283 RCFGHL---CCVNISDAVPGEVS-CFRCGQLGHTGLHWNSCMQACARSRGE---TVEASP 335
GH+ C N + G C++CGQ GH +C A +RG A
Sbjct: 54 NETGHISRECPTNPAPVAGGPGGECYKCGQHGHI---ARACPTAGPSTRGGFGGAPRAGG 110
Query: 336 SSCYNCGAEGHFARECVSSSKV 357
SCYNCG GH +REC S +
Sbjct: 111 RSCYNCGGVGHLSRECTSPAGA 132
>gi|348540581|ref|XP_003457766.1| PREDICTED: cellular nucleic acid-binding protein-like isoform 3
[Oreochromis niloticus]
Length = 137
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 69/180 (38%), Gaps = 63/180 (35%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP---------CFVCGSLEHGVRQCSKAQD-CFICKKGG 232
C+ CG GH NC S + + C+ CG L H R C + +D C+ C K G
Sbjct: 6 CFGCGHSGHWVKNCPSGGRGRGKGRGRGKDLFCYRCGELGHVARDCERTEDVCYNCGKAG 65
Query: 233 HRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVN 292
H A++C H+ Q C CG GH C
Sbjct: 66 HMARNCNHAHE------QKCYSCGSFGHIQKCCE-------------------------- 93
Query: 293 ISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECV 352
+V C+RCG++GH +H + +AS +CYN G GH A+EC
Sbjct: 94 -------KVKCYRCGEIGHVAVHCS--------------KASELNCYNYGKSGHLAKECT 132
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAK 236
+R CYNCG+ GHMA NC A ++K C+ CGS H +++C + C+ C + GH A
Sbjct: 52 ERTEDVCYNCGKAGHMARNCNHAHEQK--CYSCGSFGH-IQKCCEKVKCYRCGEIGHVAV 108
Query: 237 DC 238
C
Sbjct: 109 HC 110
>gi|330417907|ref|NP_001193408.1| zinc finger protein 9 [Bos taurus]
gi|296470847|tpg|DAA12962.1| TPA: zinc finger protein 9-like [Bos taurus]
Length = 171
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 73/189 (38%), Gaps = 49/189 (25%)
Query: 183 CYNCGEEGHMAVNCR-------------------SAVKRKKPCFVCGSLEHGVRQCSKAQ 223
C+ CG GH A C S+ C+ CG H + C
Sbjct: 6 CFKCGRVGHWAPACSKGGGARGRGARGRGHGAQCSSTTLPVICYRCGKFGHYAKDCDLLD 65
Query: 224 D-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYIC 282
D C+ C K GH AKDC + + G + C CG GH C D +E +CY C
Sbjct: 66 DICYNCGKSGHIAKDCAEPKREG---ERCCYTCGRPGHLARDC------DRQEERKCYSC 116
Query: 283 RCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCG 342
GH+ +V C+RCG++GH ++ R E +CY CG
Sbjct: 117 GKSGHI------QKYCTQVKCYRCGEIGHVAIN--------CRKMNEV------NCYRCG 156
Query: 343 AEGHFAREC 351
GH REC
Sbjct: 157 ESGHLTREC 165
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P G + CY CG GH+A +C +RK C+ CG H + C++ + C+ C + GH
Sbjct: 83 EPKREGERCCYTCGRPGHLARDCDRQEERK--CYSCGKSGHIQKYCTQVK-CYRCGEIGH 139
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGH 260
A +C N C +CG+SGH
Sbjct: 140 VAINCRK------MNEVNCYRCGESGH 160
>gi|444321188|ref|XP_004181250.1| hypothetical protein TBLA_0F01890 [Tetrapisispora blattae CBS 6284]
gi|387514294|emb|CCH61731.1| hypothetical protein TBLA_0F01890 [Tetrapisispora blattae CBS 6284]
Length = 451
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 76/196 (38%), Gaps = 31/196 (15%)
Query: 127 EIEDQSVIVRKEEQKVETADNGDEGVTTVEISDNIVLRKLLRGP-RYF----DPPDRGWQ 181
+I+D+S I T DN +T E+ DN + LRG RYF D ++
Sbjct: 44 KIDDKSAIF--------TDDNKSVALTIEEVDDNKEELRALRGQGRYFGLEDDNLNKLEP 95
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLE-HGVRQCSKAQDCFICKKGGHRAKDCPD 240
C NC + GH+ NC + C CG L+ H + C KA C C + GH CP
Sbjct: 96 KCNNCSQRGHLKKNCPHVI-----CTYCGVLDDHYSQHCPKAIICSNCNESGHYKSKCPQ 150
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRN---SYSLDDLKEVQCYICRCFGHLCCVNISDAV 297
K K F C C H C N SY L + E S
Sbjct: 151 KWKRKF-----CTMCNSKIHSRDRCPNVWRSYLLKESPENS----NNKNDTNTKKQSKLS 201
Query: 298 PGEVSCFRCGQLGHTG 313
+SC+ CG GH G
Sbjct: 202 IDFISCYNCGFSGHFG 217
>gi|238490081|ref|XP_002376278.1| zinc knuckle domain protein (Byr3), putative [Aspergillus flavus
NRRL3357]
gi|83770972|dbj|BAE61105.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220698666|gb|EED55006.1| zinc knuckle domain protein (Byr3), putative [Aspergillus flavus
NRRL3357]
gi|391871140|gb|EIT80305.1| E3 ubiquitin ligase interacting with arginine methyltransferase
[Aspergillus oryzae 3.042]
Length = 190
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 46/96 (47%), Gaps = 11/96 (11%)
Query: 179 GWQTCYNCGEEGHMAVNC-------RSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKG 231
G Q CY CG GH+A NC R+ C+ CG H R C+ Q C+ C +
Sbjct: 99 GGQECYKCGHVGHIARNCSQGGYSGDGYGGRQHTCYSCGGHGHMARDCTHGQKCYNCGEV 158
Query: 232 GHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
GH ++DCP + + +VC KC GH +C N
Sbjct: 159 GHVSRDCPSEAR----GERVCYKCKQPGHVQAACPN 190
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 59/145 (40%), Gaps = 27/145 (18%)
Query: 217 RQCS---KAQDCFICKKGGHRAKDCPDKHK----SGFQNAQVCLKCGDSGHDMFSCRN-- 267
R+C+ K + C+ C GH ++DCP SG Q C KCG GH +C
Sbjct: 61 RECTVAPKEKPCYRCSGVGHISRDCPQAPSGDGYSGATGGQECYKCGHVGHIARNCSQGG 120
Query: 268 -SYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARS 326
S ++ CY C GH+ D G+ C+ CG++GH S +
Sbjct: 121 YSGDGYGGRQHTCYSCGGHGHM----ARDCTHGQ-KCYNCGEVGHVSRDCPS------EA 169
Query: 327 RGETVEASPSSCYNCGAEGHFAREC 351
RGE V CY C GH C
Sbjct: 170 RGERV------CYKCKQPGHVQAAC 188
>gi|294882220|ref|XP_002769652.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239873234|gb|EER02370.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 144
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 50/104 (48%), Gaps = 11/104 (10%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK--AQDCFICKKGG 232
P R CYNCG+ H+A +C + ++PCF CG + H R C+ + CF C + G
Sbjct: 41 PTGRRPMNCYNCGKPDHLARDCPNEQTNQRPCFKCGQVGHFARDCTAPDTRACFRCGETG 100
Query: 233 HRAKDCP--------DKHKSGF-QNAQVCLKCGDSGHDMFSCRN 267
H A+DCP D+ G + C KCG GH C N
Sbjct: 101 HLARDCPNEDTRPESDRAPRGRGAEGRNCFKCGQPGHFARDCPN 144
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQV---CLKCGDSGHDMFSCRNSYSLDDLKEVQCYI 281
CFIC + GH A+DCP S + C CG H C N + + C+
Sbjct: 19 CFICNEPGHFARDCPQATSSSRPTGRRPMNCYNCGKPDHLARDCPN----EQTNQRPCFK 74
Query: 282 CRCFGHLCCVNISDAVPGEVSCFRCGQLGHTG---LHWNSCMQACARSRGETVEASPSSC 338
C GH P +CFRCG+ GH + ++ ++ RG E +C
Sbjct: 75 CGQVGHF---ARDCTAPDTRACFRCGETGHLARDCPNEDTRPESDRAPRGRGAEG--RNC 129
Query: 339 YNCGAEGHFAREC 351
+ CG GHFAR+C
Sbjct: 130 FKCGQPGHFARDC 142
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 58/147 (39%), Gaps = 46/147 (31%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP-------CFVCGSLEHGVRQCSKAQ----DCFICKKG 231
C+ C E GH A +C A +P C+ CG +H R C Q CF C +
Sbjct: 19 CFICNEPGHFARDCPQATSSSRPTGRRPMNCYNCGKPDHLARDCPNEQTNQRPCFKCGQV 78
Query: 232 GHRAKDC--PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC 289
GH A+DC PD + C +CG++GH C N + +
Sbjct: 79 GHFARDCTAPD--------TRACFRCGETGHLARDCPNEDTRPE---------------- 114
Query: 290 CVNISDAVP-----GEVSCFRCGQLGH 311
SD P +CF+CGQ GH
Sbjct: 115 ----SDRAPRGRGAEGRNCFKCGQPGH 137
>gi|294873524|ref|XP_002766658.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239867715|gb|EEQ99375.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 144
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 50/104 (48%), Gaps = 11/104 (10%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK--AQDCFICKKGG 232
P R CYNCG+ H+A +C + ++PCF CG + H R C+ + CF C + G
Sbjct: 41 PTGRRPMNCYNCGKPDHLARDCPNEQTNQRPCFKCGQVGHFARDCTAPDTRACFRCGETG 100
Query: 233 HRAKDCP--------DKHKSGF-QNAQVCLKCGDSGHDMFSCRN 267
H A+DCP D+ G + C KCG GH C N
Sbjct: 101 HLARDCPNEDTRPESDRAPRGRGAEGRNCFKCGQPGHFARDCPN 144
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQV---CLKCGDSGHDMFSCRNSYSLDDLKEVQCYI 281
CFIC + GH A+DCP S + C CG H C N + + C+
Sbjct: 19 CFICNEPGHFARDCPQASSSTRPTGRRPMNCYNCGKPDHLARDCPN----EQTNQRPCFK 74
Query: 282 CRCFGHLCCVNISDAVPGEVSCFRCGQLGHTG---LHWNSCMQACARSRGETVEASPSSC 338
C GH P +CFRCG+ GH + ++ ++ RG E +C
Sbjct: 75 CGQVGHF---ARDCTAPDTRACFRCGETGHLARDCPNEDTRPESDRAPRGRGAEG--RNC 129
Query: 339 YNCGAEGHFAREC 351
+ CG GHFAR+C
Sbjct: 130 FKCGQPGHFARDC 142
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 58/147 (39%), Gaps = 46/147 (31%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP-------CFVCGSLEHGVRQCSKAQ----DCFICKKG 231
C+ C E GH A +C A +P C+ CG +H R C Q CF C +
Sbjct: 19 CFICNEPGHFARDCPQASSSTRPTGRRPMNCYNCGKPDHLARDCPNEQTNQRPCFKCGQV 78
Query: 232 GHRAKDC--PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC 289
GH A+DC PD + C +CG++GH C N + +
Sbjct: 79 GHFARDCTAPD--------TRACFRCGETGHLARDCPNEDTRPE---------------- 114
Query: 290 CVNISDAVP-----GEVSCFRCGQLGH 311
SD P +CF+CGQ GH
Sbjct: 115 ----SDRAPRGRGAEGRNCFKCGQPGH 137
>gi|440474066|gb|ELQ42833.1| zinc finger protein GIS2 [Magnaporthe oryzae Y34]
gi|440485892|gb|ELQ65808.1| zinc finger protein GIS2 [Magnaporthe oryzae P131]
Length = 487
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 107/289 (37%), Gaps = 79/289 (27%)
Query: 99 DVIIEDVKSSDKKRIRVRKKKKKEADKIEIE------DQSVIVRKEEQKVETADNGDEGV 152
+ + +D K+ IR K D + +E D V + E ++ DE +
Sbjct: 162 EAVADDDMFDAKEAIRAYVKALPNTDFVALENALRKHDVGVFLIAMELEM------DETM 215
Query: 153 TTVEISDN------IVLRKLLRGPRYFD----PPDRGWQTCYNCGEEGHMAVNCRSAVKR 202
T +++ N + R R PR D P D G + E G M ++ V R
Sbjct: 216 TNMDLQGNLGKKYSVTYRFSGRCPRPRDRQAWPKDAG-ENLERLKEAGDMV---KTLVPR 271
Query: 203 KKPCFVCGSLEHGVRQC--------SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLK 254
C C +L H RQC +A CF C + GHR +DC F C
Sbjct: 272 ---CRNCDALGHDRRQCPEDPIEKQQQAITCFNCGETGHRVRDCTTPRVDKF----ACKN 324
Query: 255 CGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGL 314
C SGH C VP ++ C +CG++G
Sbjct: 325 CNKSGHTAKECPEPRP--------------------------VPEDLECTKCGEIGK--- 355
Query: 315 HWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVRKRNID 363
HW A+SR +C+NCGAE H +R+C +++ RN D
Sbjct: 356 HWRKDCPQGAQSR---------ACHNCGAEDHMSRDCTEPRRMKCRNCD 395
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 57/139 (41%), Gaps = 22/139 (15%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ------DCFICKK-GGHR 234
TC+NCGE GH +C + K C C H ++C + + +C C + G H
Sbjct: 298 TCFNCGETGHRVRDCTTPRVDKFACKNCNKSGHTAKECPEPRPVPEDLECTKCGEIGKHW 357
Query: 235 AKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVN 292
KDCP +S + C CG H C + + ++C C F H+ C
Sbjct: 358 RKDCPQGAQS-----RACHNCGAEDHMSRDCT------EPRRMKCRNCDEFDHVAKDCPK 406
Query: 293 ISDAVPGEVSCFRCGQLGH 311
D V C C ++GH
Sbjct: 407 PRDMS--RVKCMNCSEMGH 423
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 66/178 (37%), Gaps = 30/178 (16%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKK----PCFVCGSLEHGVRQCSKAQ-DCFICK---KGGHR 234
C NC GH C K+ CF CG H VR C+ + D F CK K GH
Sbjct: 272 CRNCDALGHDRRQCPEDPIEKQQQAITCFNCGETGHRVRDCTTPRVDKFACKNCNKSGHT 331
Query: 235 AKDCPDKHKSGFQNAQVCLKCGDSG-HDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNI 293
AK+CP+ C KCG+ G H C + C+ C H+ +
Sbjct: 332 AKECPEPRP--VPEDLECTKCGEIGKHWRKDCPQG-----AQSRACHNCGAEDHM---SR 381
Query: 294 SDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
P + C C + H + C + R + S C NC GHF +C
Sbjct: 382 DCTEPRRMKCRNCDEFDHV-------AKDCPKPR----DMSRVKCMNCSEMGHFKSKC 428
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 8/56 (14%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD--DLKEVQ 278
C +C K GHR +DCP+K Q+C C + GH + C N +D D+++++
Sbjct: 103 CNLCGKDGHRKRDCPEKP------PQLCANCQEEGHSVNECENPRKIDRSDVQDLE 152
>gi|441674301|ref|XP_004092503.1| PREDICTED: zinc finger CCHC domain-containing protein 13 [Nomascus
leucogenys]
Length = 170
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 73/172 (42%), Gaps = 51/172 (29%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
TCY CGE G A NC + G++ C+ C + GH AKDC +
Sbjct: 46 TCYCCGESGRHAKNC----------VLLGNI------------CYNCGRSGHIAKDCKEP 83
Query: 242 HKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEV 301
+ + Q C CG GH C D KE +CY C GH+ +V
Sbjct: 84 KR---ERHQHCYNCGRLGHLARDC------DRQKEQKCYSCGKLGHI------QKDCAQV 128
Query: 302 SCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVS 353
C+RCG++GH ++ + +AS +CY CG GH A+EC S
Sbjct: 129 KCYRCGEIGHVSINCS--------------KASEVTCYRCGKSGHLAKECPS 166
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG GH+A +C ++++ C+ CG L H + C++ + C+ C + GH
Sbjct: 82 EPKRERHQHCYNCGRLGHLARDCDR--QKEQKCYSCGKLGHIQKDCAQVK-CYRCGEIGH 138
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGH 260
+ +C + C +CG SGH
Sbjct: 139 VSINCSK------ASEVTCYRCGKSGH 159
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 7/63 (11%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD--CFICKKGGHRAKDC 238
Q CY+CG+ GH+ +C + VK C+ CG + H CSKA + C+ C K GH AK+C
Sbjct: 110 QKCYSCGKLGHIQKDC-AQVK----CYRCGEIGHVSINCSKASEVTCYRCGKSGHLAKEC 164
Query: 239 PDK 241
P +
Sbjct: 165 PSE 167
>gi|380494230|emb|CCF33305.1| zinc knuckle [Colletotrichum higginsianum]
Length = 226
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 75/198 (37%), Gaps = 41/198 (20%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
+ CY CG GH A C SA ++ C+ C H C ++A+ C+ C+ GH
Sbjct: 7 RACYKCGNVGHYAEVCSSA---ERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQ 63
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD----------------------D 273
DCP SG + C CG GH +C + ++
Sbjct: 64 ADCPTLRLSGAGTSGRCYNCGQPGHLARACPSPAGVNMGRGGPVPRGAFGGYGRGGFAGG 123
Query: 274 LKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEA 333
+ CY C H D + C+ CG+LGH + C G +
Sbjct: 124 PRPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI-------SRDCTAPNGGPLNT 172
Query: 334 SPSSCYNCGAEGHFAREC 351
+ +CY CG GH +R+C
Sbjct: 173 AGKTCYQCGEAGHISRDC 190
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 12/73 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK---------AQDCFICKKGG 232
TCY CG H A +C++ + C+ CG L H R C+ + C+ C + G
Sbjct: 128 TCYKCGGPNHFARDCQAQAMK---CYACGKLGHISRDCTAPNGGPLNTAGKTCYQCGEAG 184
Query: 233 HRAKDCPDKHKSG 245
H ++DCP K +G
Sbjct: 185 HISRDCPQKATNG 197
>gi|302143876|emb|CBI22737.3| unnamed protein product [Vitis vinifera]
Length = 279
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 206 CFVCGSLEHGVRQCS-KAQ-----DCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSG 259
CF+C + +H + C KAQ C +C++ GH K+CPDK + + ++C CG++G
Sbjct: 79 CFICKAKDHIAKHCPEKAQWERHKICLLCRQRGHSLKNCPDKGEEKL-DKKLCYNCGETG 137
Query: 260 HDMFSCRNSYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGHTG 313
H + +C K C+IC GHL C N P C CG + H
Sbjct: 138 HSLANCPQPLQEGGTKFASCFICNERGHLSKNCPKNSHGIYPKGGCCKICGGVTHLA 194
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 45/112 (40%), Gaps = 20/112 (17%)
Query: 161 IVLRKLLRGPRYFDPPDRGWQ-----TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHG 215
I L RG + PD+G + CYNCGE GH NC ++ E G
Sbjct: 103 ICLLCRQRGHSLKNCPDKGEEKLDKKLCYNCGETGHSLANCPQPLQ-----------EGG 151
Query: 216 VRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
+K CFIC + GH +K+CP + C CG H C N
Sbjct: 152 ----TKFASCFICNERGHLSKNCPKNSHGIYPKGGCCKICGGVTHLAKDCPN 199
>gi|67537882|ref|XP_662715.1| hypothetical protein AN5111.2 [Aspergillus nidulans FGSC A4]
gi|40743102|gb|EAA62292.1| hypothetical protein AN5111.2 [Aspergillus nidulans FGSC A4]
Length = 176
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 15/101 (14%)
Query: 179 GWQTCYNCGEEGHMAVNC-----------RSAVKRKKPCFVCGSLEHGVRQCSKAQDCFI 227
G Q CY CG GH+A NC R++ C+ CG H R C++ Q C+
Sbjct: 80 GGQECYKCGRVGHIARNCSQGGSYGGGFGGGYGGRQQTCYSCGGFGHMARDCTQGQKCYN 139
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNS 268
C + GH ++DCP + K +VC +C GH +C N+
Sbjct: 140 CGETGHVSRDCPTEAK----GERVCYQCKQPGHIQSACPNN 176
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 80/190 (42%), Gaps = 37/190 (19%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVKRKKP-CFVCGSLE-----HGVRQCS---KAQDCFICK 229
G + C+NCGE H A +C K+ P C+ CG L+ H R+C+ K + C+ C
Sbjct: 4 GGRVCFNCGEATHQARDC---PKKGTPTCYNCGVLDRLGQGHVSRECTVAPKEKSCYRCG 60
Query: 230 KGGHRAKDCPDKHKSGF-QNAQVCLKCGDSGHDMFSCRN-------SYSLDDLKEVQCYI 281
GH +++CP ++ Q C KCG GH +C ++ CY
Sbjct: 61 AVGHISRECPQAGENERPAGGQECYKCGRVGHIARNCSQGGSYGGGFGGGYGGRQQTCYS 120
Query: 282 CRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNC 341
C FGH+ D G+ C+ CG+ GH + ++GE V CY C
Sbjct: 121 CGGFGHM----ARDCTQGQ-KCYNCGETGHVSRDCPT------EAKGERV------CYQC 163
Query: 342 GAEGHFAREC 351
GH C
Sbjct: 164 KQPGHIQSAC 173
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 72/163 (44%), Gaps = 39/163 (23%)
Query: 174 DPPDRGWQTCYNCG-----EEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA------ 222
D P +G TCYNCG +GH++ C A K +K C+ CG++ H R+C +A
Sbjct: 20 DCPKKGTPTCYNCGVLDRLGQGHVSRECTVAPK-EKSCYRCGAVGHISRECPQAGENERP 78
Query: 223 ---QDCFICKKGGHRAKDCPDKHKSGFQNA-------QVCLKCGDSGHDMFSCRNSYSLD 272
Q+C+ C + GH A++C G Q C CG GH + D
Sbjct: 79 AGGQECYKCGRVGHIARNCSQGGSYGGGFGGGYGGRQQTCYSCGGFGH--------MARD 130
Query: 273 DLKEVQCYICRCFGHLCCVNISDAVP----GEVSCFRCGQLGH 311
+ +CY C GH +S P GE C++C Q GH
Sbjct: 131 CTQGQKCYNCGETGH-----VSRDCPTEAKGERVCYQCKQPGH 168
>gi|260408201|gb|ACX37415.1| vasa [Botryllus schlosseri]
Length = 655
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 181 QTCYNCGEEGHMAVNCR--SAVKRKKPCFVCGSLEHGVRQC------SKAQDCFICKKGG 232
+ C+ CG+EGHM+ C R K CF CG H R+C S+ + CF C + G
Sbjct: 51 RACFKCGQEGHMSRECPEGGGGSRPKGCFKCGEEGHMSRECPSGGGDSRPKGCFKCGEEG 110
Query: 233 HRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
H +++CP G + C KCG+ GH C N
Sbjct: 111 HMSRECP-TGGGGDSRPKGCFKCGEEGHMSRECPN 144
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 37/132 (28%)
Query: 220 SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQC 279
S ++ CF C + GH +++CP+ G + C KCG+ GH
Sbjct: 48 SNSRACFKCGQEGHMSRECPEG--GGGSRPKGCFKCGEEGH------------------- 86
Query: 280 YICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCY 339
C D+ P CF+CG+ GH + C G ++ P C+
Sbjct: 87 -----MSRECPSGGGDSRP--KGCFKCGEEGHMS-------RECPTGGGG--DSRPKGCF 130
Query: 340 NCGAEGHFAREC 351
CG EGH +REC
Sbjct: 131 KCGEEGHMSREC 142
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 10/52 (19%)
Query: 302 SCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVS 353
+CF+CGQ GH C + SR P C+ CG EGH +REC S
Sbjct: 52 ACFKCGQEGHMS---RECPEGGGGSR-------PKGCFKCGEEGHMSRECPS 93
>gi|48374972|gb|AAT42170.1| putative actin depolymerizing factor [Sorghum bicolor]
Length = 463
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 22/130 (16%)
Query: 206 CFVCGSLEHGVRQCS------KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSG 259
CF+C S +H + C K + C +C++ GH K+CPDK + + + C CG+SG
Sbjct: 70 CFICKSTDHVAKACPEKALWDKNKICLLCRERGHSLKNCPDKSEGNLK--KFCYNCGESG 127
Query: 260 HDMFSCRNSY-------SLDDL----KEVQCYICRCFGHL---CCVNISDAVPGEVSCFR 305
H + C S+ D+ C+IC+ GHL C N P C
Sbjct: 128 HSLSKCPKPIENGNPRASIVDISGGTNFASCFICKQQGHLSKNCPENKHGIYPKGGCCKE 187
Query: 306 CGQLGHTGLH 315
CG++ H H
Sbjct: 188 CGEVTHLARH 197
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
CYNCGE GH C ++ P + G S CFICK+ GH +K+CP+
Sbjct: 120 CYNCGESGHSLSKCPKPIENGNPRASIVDISGGTNFAS----CFICKQQGHLSKNCPENK 175
Query: 243 KSGFQNAQVCLKCGDSGHDMFSCRN 267
+ C +CG+ H C N
Sbjct: 176 HGIYPKGGCCKECGEVTHLARHCPN 200
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 37/133 (27%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
CFICK H AK CP+K + + ++CL C + GH + +C + S +LK+
Sbjct: 70 CFICKSTDHVAKACPEK--ALWDKNKICLLCRERGHSLKNCPDK-SEGNLKKF------- 119
Query: 285 FGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQAC--ARSRGETVEASP----SSC 338
C+ CG+ GH+ + C + R V+ S +SC
Sbjct: 120 ------------------CYNCGESGHS---LSKCPKPIENGNPRASIVDISGGTNFASC 158
Query: 339 YNCGAEGHFAREC 351
+ C +GH ++ C
Sbjct: 159 FICKQQGHLSKNC 171
>gi|310792945|gb|EFQ28406.1| zinc knuckle [Glomerella graminicola M1.001]
Length = 229
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 75/198 (37%), Gaps = 41/198 (20%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
+ CY CG GH A C SA ++ C+ C H C ++A+ C+ C+ GH
Sbjct: 7 RACYKCGNVGHYAEVCSSA---ERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQ 63
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD----------------------D 273
DCP SG + C CG GH +C + ++
Sbjct: 64 ADCPTLRLSGAGTSGRCYNCGQPGHLARACPSPAGVNMGRGGPVPRGAYGGYGRGGFTGG 123
Query: 274 LKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEA 333
+ CY C H D + C+ CG+LGH + C G +
Sbjct: 124 PRPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI-------SRDCTAPNGGPLNT 172
Query: 334 SPSSCYNCGAEGHFAREC 351
+ +CY CG GH +R+C
Sbjct: 173 AGKTCYQCGEAGHISRDC 190
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 12/73 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK---------AQDCFICKKGG 232
TCY CG H A +C++ + C+ CG L H R C+ + C+ C + G
Sbjct: 128 TCYKCGGPNHFARDCQAQAMK---CYACGKLGHISRDCTAPNGGPLNTAGKTCYQCGEAG 184
Query: 233 HRAKDCPDKHKSG 245
H ++DCP K+ +G
Sbjct: 185 HISRDCPQKNTNG 197
>gi|145519341|ref|XP_001445537.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412992|emb|CAK78140.1| unnamed protein product [Paramecium tetraurelia]
Length = 300
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 167 LRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCF 226
L RY+ ++ CY C + GH C + + C C S +H CS CF
Sbjct: 180 LGANRYYQQ--NPFEYCYRCKQTGHQERQCTEQLNIQ--CNYCLSYKHVGDICSNV-SCF 234
Query: 227 ICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC-RNSYSLDD-LKEVQCYICRC 284
C + GHR +DC + Q Q C+ CG + H C Y+L + L +++C +CR
Sbjct: 235 RCNQMGHRKQDCKFQ-----QRLQQCINCGKNTHKEQDCGILIYNLHNFLDQIECLVCRN 289
Query: 285 FGHLCCVNI 293
+GH+ C+NI
Sbjct: 290 YGHINCLNI 298
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 38/102 (37%), Gaps = 25/102 (24%)
Query: 250 QVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQL 309
+ C +C +GH C + +QC C + H+ + VSCFRC Q+
Sbjct: 192 EYCYRCKQTGHQERQCTEQLN------IQCNYCLSYKHV------GDICSNVSCFRCNQM 239
Query: 310 GHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
GH R + + C NCG H ++C
Sbjct: 240 GH-------------RKQDCKFQQRLQQCINCGKNTHKEQDC 268
>gi|400598844|gb|EJP66551.1| zinc knuckle protein [Beauveria bassiana ARSEF 2860]
Length = 224
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 78/207 (37%), Gaps = 44/207 (21%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
+ CY CG GH A C S+ ++ C+ C H C ++A+ C+ C+ GH
Sbjct: 7 RACYKCGNVGHYAEVCSSS---ERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQ 63
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSC----------------RNSYSLDDL----- 274
DCP +G + C CG GH +C R Y+ +
Sbjct: 64 ADCPTLRLTGNATSGRCYNCGQPGHLARACPNPVGPAAMGRGAPMGRGGYAGGNFGRGGF 123
Query: 275 ----KEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGET 330
+ CY C H D + C+ CG+LGH + C G
Sbjct: 124 AGGPRPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI-------SRDCTAPNGGP 172
Query: 331 VEASPSSCYNCGAEGHFARECVSSSKV 357
+ + +CY CG GH +R+C + V
Sbjct: 173 LNTAGKTCYQCGEAGHISRDCPQKAAV 199
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 19/154 (12%)
Query: 203 KKPCFVCGSLEHGVRQCSKAQD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHD 261
++ C+ CG++ H CS ++ C+ CK+ GH + CP + A+ C C GH
Sbjct: 6 RRACYKCGNVGHYAEVCSSSERLCYNCKQPGHESNGCPLPRTT---EAKQCYHCQGLGHV 62
Query: 262 MFSCRNSYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGHTGLHWNS 318
C + +CY C GHL C + A G + G+ G+ G ++
Sbjct: 63 QADCPTLRLTGNATSGRCYNCGQPGHLARACPNPVGPAAMGRGAPM--GRGGYAGGNF-- 118
Query: 319 CMQACARSRGETVEAS-PSSCYNCGAEGHFAREC 351
RG P++CY CG HFAR+C
Sbjct: 119 -------GRGGFAGGPRPATCYKCGGPNHFARDC 145
>gi|378732167|gb|EHY58626.1| cellular nucleic acid-binding protein [Exophiala dermatitidis
NIH/UT8656]
Length = 464
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA--QDCFICKKG 231
D P+R QTC NCG E HMA C + K+ C CG +H R+C A Q C IC
Sbjct: 310 DCPNREKQTCRNCGAEDHMARECPD--REKRTCRKCGEEDHIARECPNAPKQTCNICDAE 367
Query: 232 GHRAKDCPDKHKSGFQ-----NAQVCLKCGDSGHDMFSC 265
H AKDCP K + G + + VC C GH C
Sbjct: 368 DHFAKDCPKKGEPGLRPRRDWSQVVCSLCEQKGHGRARC 406
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 61/143 (42%), Gaps = 27/143 (18%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP---CFVCGSLEHGVRQCS--KAQDCFICKKGGHRAK 236
TCY CGE+GH +C +RKKP C +C + +H + C + Q C C H A+
Sbjct: 273 TCYLCGEQGHRVRDCTQ--ERKKPGRACRICEAEDHIAKDCPNREKQTCRNCGAEDHMAR 330
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDA 296
+CPD+ K + C KCG+ H C N+ + C IC H
Sbjct: 331 ECPDREK------RTCRKCGEEDHIARECPNA------PKQTCNICDAEDHFAKDCPKKG 378
Query: 297 VPG--------EVSCFRCGQLGH 311
PG +V C C Q GH
Sbjct: 379 EPGLRPRRDWSQVVCSLCEQKGH 401
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 17/108 (15%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ----DCFICKKGGHRAKD 237
C NCG+EGH A C ++ CF CG H +C+ + +C C + GH D
Sbjct: 33 ACRNCGQEGHFARECPEP-RKMGACFNCGEEGHSKAECTAPRKFKGECRNCGEEGHMISD 91
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD-----DLKEVQCY 280
CP + C C GH+ C+N +D D+ E + +
Sbjct: 92 CP-------TYVEKCKNCQQEGHNAIDCKNPMMMDRHGVADMSEAEAW 132
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-SKAQDCFICKKGGH 233
P R C+NCGEEGH C + K K C CG H + C + + C C++ GH
Sbjct: 48 PEPRKMGACFNCGEEGHSKAECTAPRKFKGECRNCGEEGHMISDCPTYVEKCKNCQQEGH 107
Query: 234 RAKDC 238
A DC
Sbjct: 108 NAIDC 112
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 57/163 (34%), Gaps = 35/163 (21%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
C C+K GH+ KDCP++ Q C CG+ GH + C C IC
Sbjct: 247 CRNCEKVGHKTKDCPEEKMVREQLIVTCYLCGEQGHRVRDCTQERKKPGRA---CRICEA 303
Query: 285 FGHLC--CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCG 342
H+ C N + +C CG H E + +C CG
Sbjct: 304 EDHIAKDCPNRE-----KQTCRNCGAEDHMAR--------------ECPDREKRTCRKCG 344
Query: 343 AEGHFARECVSSSKVRKRNIDAS-----------TPTFRPHRE 374
E H AREC ++ K DA P RP R+
Sbjct: 345 EEDHIARECPNAPKQTCNICDAEDHFAKDCPKKGEPGLRPRRD 387
>gi|259484556|tpe|CBF80881.1| TPA: zinc knuckle domain protein (Byr3), putative (AFU_orthologue;
AFUA_1G07630) [Aspergillus nidulans FGSC A4]
Length = 171
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 71/158 (44%), Gaps = 34/158 (21%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA---------QD 224
D P +G TCYNCG +GH++ C A K K C+ CG++ H R+C +A Q+
Sbjct: 20 DCPKKGTPTCYNCGGQGHVSRECTVAPKEKS-CYRCGAVGHISRECPQAGENERPAGGQE 78
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNA-------QVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
C+ C + GH A++C G Q C CG GH + D +
Sbjct: 79 CYKCGRVGHIARNCSQGGSYGGGFGGGYGGRQQTCYSCGGFGH--------MARDCTQGQ 130
Query: 278 QCYICRCFGHLCCVNISDAVP----GEVSCFRCGQLGH 311
+CY C GH +S P GE C++C Q GH
Sbjct: 131 KCYNCGETGH-----VSRDCPTEAKGERVCYQCKQPGH 163
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 15/101 (14%)
Query: 179 GWQTCYNCGEEGHMAVNC-----------RSAVKRKKPCFVCGSLEHGVRQCSKAQDCFI 227
G Q CY CG GH+A NC R++ C+ CG H R C++ Q C+
Sbjct: 75 GGQECYKCGRVGHIARNCSQGGSYGGGFGGGYGGRQQTCYSCGGFGHMARDCTQGQKCYN 134
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNS 268
C + GH ++DCP + K +VC +C GH +C N+
Sbjct: 135 CGETGHVSRDCPTEAK----GERVCYQCKQPGHIQSACPNN 171
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 78/185 (42%), Gaps = 32/185 (17%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVKRKKP-CFVCGSLEHGVRQCS---KAQDCFICKKGGHR 234
G + C+NCGE H A +C K+ P C+ CG H R+C+ K + C+ C GH
Sbjct: 4 GGRVCFNCGEATHQARDC---PKKGTPTCYNCGGQGHVSRECTVAPKEKSCYRCGAVGHI 60
Query: 235 AKDCPDKHKSGF-QNAQVCLKCGDSGHDMFSCRN-------SYSLDDLKEVQCYICRCFG 286
+++CP ++ Q C KCG GH +C ++ CY C FG
Sbjct: 61 SRECPQAGENERPAGGQECYKCGRVGHIARNCSQGGSYGGGFGGGYGGRQQTCYSCGGFG 120
Query: 287 HLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGH 346
H+ D G+ C+ CG+ GH + ++GE V CY C GH
Sbjct: 121 HM----ARDCTQGQ-KCYNCGETGHVSRDCPT------EAKGERV------CYQCKQPGH 163
Query: 347 FAREC 351
C
Sbjct: 164 IQSAC 168
>gi|353236645|emb|CCA68635.1| hypothetical protein PIIN_02500 [Piriformospora indica DSM 11827]
Length = 257
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 15/100 (15%)
Query: 181 QTCYNCGEEGHMAVNC--RSAVKRKKP----CFVCGSLEHGVRQCSKAQD---------C 225
+TC+ C ++GH A +C S + K+P C+ CG+ +H + +C K D C
Sbjct: 93 KTCFACRQKGHAAKDCPSNSELGEKRPVTGICYRCGATKHTLAKCRKPIDEANPLPFASC 152
Query: 226 FICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
FICK GH A CP K + N C CG + H +C
Sbjct: 153 FICKGKGHLASSCPQNEKGIYPNGGSCKLCGQTDHLARAC 192
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 50/132 (37%), Gaps = 35/132 (26%)
Query: 223 QDCFICKKGGHRAKDCPDKHKSGFQN--AQVCLKCGDSGHDMFSCRNSY-SLDDLKEVQC 279
+ CF C++ GH AKDCP + G + +C +CG + H + CR + L C
Sbjct: 93 KTCFACRQKGHAAKDCPSNSELGEKRPVTGICYRCGATKHTLAKCRKPIDEANPLPFASC 152
Query: 280 YICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCY 339
+IC+ GHL C Q G++ N SC
Sbjct: 153 FICKGKGHLAS--------------SCPQ-NEKGIYPNG-----------------GSCK 180
Query: 340 NCGAEGHFAREC 351
CG H AR C
Sbjct: 181 LCGQTDHLARAC 192
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 46/115 (40%), Gaps = 25/115 (21%)
Query: 203 KKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQN--AQVCLKCGDSGH 260
+K CF C ++ GH AKDCP + G + +C +CG + H
Sbjct: 92 EKTCFAC-------------------RQKGHAAKDCPSNSELGEKRPVTGICYRCGATKH 132
Query: 261 DMFSCRNSY-SLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+ CR + L C+IC+ GHL C N P SC CGQ H
Sbjct: 133 TLAKCRKPIDEANPLPFASCFICKGKGHLASSCPQNEKGIYPNGGSCKLCGQTDH 187
>gi|317137775|ref|XP_001727944.2| cellular nucleic acid-binding protein [Aspergillus oryzae RIB40]
Length = 171
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 75/185 (40%), Gaps = 44/185 (23%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
D P +G TCYNCG +GH++ C A K +KPC+ C + GH
Sbjct: 22 DCPKKGTPTCYNCGGQGHVSRECTVAPK-EKPCYRCSGV-------------------GH 61
Query: 234 RAKDCPDKHK----SGFQNAQVCLKCGDSGHDMFSCRN---SYSLDDLKEVQCYICRCFG 286
++DCP SG Q C KCG GH +C S ++ CY C G
Sbjct: 62 ISRDCPQAPSGDGYSGATGGQECYKCGHVGHIARNCSQGGYSGDGYGGRQHTCYSCGGHG 121
Query: 287 HLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGH 346
H+ D G+ C+ CG++GH S +RGE V CY C GH
Sbjct: 122 HM----ARDCTHGQ-KCYNCGEVGHVSRDCPS------EARGERV------CYKCKQPGH 164
Query: 347 FAREC 351
C
Sbjct: 165 VQAAC 169
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 46/96 (47%), Gaps = 11/96 (11%)
Query: 179 GWQTCYNCGEEGHMAVNC-------RSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKG 231
G Q CY CG GH+A NC R+ C+ CG H R C+ Q C+ C +
Sbjct: 80 GGQECYKCGHVGHIARNCSQGGYSGDGYGGRQHTCYSCGGHGHMARDCTHGQKCYNCGEV 139
Query: 232 GHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
GH ++DCP + + +VC KC GH +C N
Sbjct: 140 GHVSRDCPSEAR----GERVCYKCKQPGHVQAACPN 171
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 58/150 (38%), Gaps = 33/150 (22%)
Query: 220 SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQC 279
++ + CF C H+A+DCP K C CG GH C + KE C
Sbjct: 5 TRGRGCFNCGDASHQARDCPKK------GTPTCYNCGGQGHVSRECTVA-----PKEKPC 53
Query: 280 YICRCFGHLCCVNISDAVP------------GEVSCFRCGQLGHTGLHWNSCMQACARSR 327
Y C GH IS P G C++CG +GH +C Q
Sbjct: 54 YRCSGVGH-----ISRDCPQAPSGDGYSGATGGQECYKCGHVGHI---ARNCSQG--GYS 103
Query: 328 GETVEASPSSCYNCGAEGHFARECVSSSKV 357
G+ +CY+CG GH AR+C K
Sbjct: 104 GDGYGGRQHTCYSCGGHGHMARDCTHGQKC 133
>gi|239611240|gb|EEQ88227.1| zinc knuckle transcription factor [Ajellomyces dermatitidis ER-3]
Length = 477
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ----DCFICKKGGHRAKD 237
C NCG+ GH A +C K CF CG H +C+K + C IC+K GH A +
Sbjct: 45 ACRNCGQSGHFARDCTEPRKATGACFNCGEEGHNKAECTKPRVFKGHCRICEKEGHPASE 104
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
CP+K A VC C + GH C + D
Sbjct: 105 CPEK------PADVCKNCKEEGHKTMECTQNRKFD 133
>gi|342888969|gb|EGU88180.1| hypothetical protein FOXB_01318 [Fusarium oxysporum Fo5176]
Length = 223
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 73/199 (36%), Gaps = 42/199 (21%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
+ CY CG GH A C SA ++ C+ C H C ++A+ C+ C+ GH
Sbjct: 7 RACYKCGNVGHYAEVCSSA---ERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQ 63
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYS-----------------------LD 272
DCP SG + C CG GH +C N
Sbjct: 64 ADCPTLRLSGTGTSGRCYNCGQPGHLARACPNPVGPTMGRGAPMGRGGFPGGYGRGGFAG 123
Query: 273 DLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVE 332
+ CY C H D + C+ CG+LGH + C G +
Sbjct: 124 GPRPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI-------SRDCTAPNGGPLN 172
Query: 333 ASPSSCYNCGAEGHFAREC 351
+ +CY CG GH +R+C
Sbjct: 173 TAGKTCYQCGEAGHISRDC 191
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 12/74 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK---------AQDCFICKKGG 232
TCY CG H A +C++ + C+ CG L H R C+ + C+ C + G
Sbjct: 129 TCYKCGGPNHFARDCQAQAMK---CYACGKLGHISRDCTAPNGGPLNTAGKTCYQCGEAG 185
Query: 233 HRAKDCPDKHKSGF 246
H ++DCP K+ G
Sbjct: 186 HISRDCPQKNAPGV 199
>gi|358057974|dbj|GAA96219.1| hypothetical protein E5Q_02883 [Mixia osmundae IAM 14324]
Length = 215
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 89/225 (39%), Gaps = 53/225 (23%)
Query: 176 PDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK-----AQDCFICKK 230
P R + C+ CG++ H+A +C S VK CF C S +H + +CS+ + C+ C+
Sbjct: 5 PARRPRGCFRCGKDDHLAASCPSEVKL---CFNCASPDHSLAECSEERKPMSMTCYNCQG 61
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC-------------------RNSYSL 271
GHRA DC + + + ++C CG GH +C R+
Sbjct: 62 QGHRAADCTEARVA--RPEKLCYTCGQGGHVASACDQGQTAPAKLPAPVAEAPSRSKAPR 119
Query: 272 DDLKEVQCYICRCFGHLC--CVNISDAVPGEVS--------CFRCGQLGHTGLHW-NSCM 320
D + + C+ C GH C P E S C CG G H C
Sbjct: 120 QD-RVLTCHRCGQDGHFARDCSAADPISPREPSARPPRTKTCHSCG-----GAHLIRDCP 173
Query: 321 QACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVRKRNIDAS 365
A R +T CYNCG GH +R C S + A+
Sbjct: 174 TATDRPAAKT-------CYNCGLSGHLSRNCSQPSATTVESAPAA 211
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 70/175 (40%), Gaps = 36/175 (20%)
Query: 221 KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC---RNSYSLDDLKEV 277
+ + CF C K H A CP + K +C C H + C R S+
Sbjct: 8 RPRGCFRCGKDDHLAASCPSEVK-------LCFNCASPDHSLAECSEERKPMSM------ 54
Query: 278 QCYICRCFGHLC--CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASP 335
CY C+ GH C A P E C+ CGQ GH + A A+ EA P
Sbjct: 55 TCYNCQGQGHRAADCTEARVARP-EKLCYTCGQGGHVASACDQGQTAPAKLPAPVAEA-P 112
Query: 336 S-----------SCYNCGAEGHFARECVSSSKVRKRNIDASTPTFRPHRENKDHS 379
S +C+ CG +GHFAR+C ++ + R P+ RP R HS
Sbjct: 113 SRSKAPRQDRVLTCHRCGQDGHFARDCSAADPISPRE-----PSARPPRTKTCHS 162
>gi|326492548|dbj|BAK02057.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 268
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 18/138 (13%)
Query: 206 CFVCGSLEHGVRQCS------KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSG 259
CF+C +H + C K + C +C++ GH K+CPDK + + C CG+SG
Sbjct: 72 CFICKGTDHAAKNCPEKSYWDKNKICLLCRERGHSMKNCPDKGDGDLK--KFCYNCGESG 129
Query: 260 HDMFSCRNSYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGHTGLHW 316
H + C C++C+ GHL C + P C CG++ H H
Sbjct: 130 HSLSKCPKPIENGGTNFASCFVCKQQGHLSKDCPESTHGIYPKGGCCKICGEVTHLARH- 188
Query: 317 NSCMQACARSRGETVEAS 334
C R + E+S
Sbjct: 189 ------CPNKRQQYFESS 200
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 58/133 (43%), Gaps = 15/133 (11%)
Query: 222 AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYI 281
+ CFICK H AK+CP+ KS + ++CL C + GH M +C + DLK+ CY
Sbjct: 69 GEQCFICKGTDHAAKNCPE--KSYWDKNKICLLCRERGHSMKNCPDKGD-GDLKKF-CYN 124
Query: 282 CRCFGH---LCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSC 338
C GH C I + SCF C Q GH + C S + C
Sbjct: 125 CGESGHSLSKCPKPIENGGTNFASCFVCKQQGHLS-------KDCPEST-HGIYPKGGCC 176
Query: 339 YNCGAEGHFAREC 351
CG H AR C
Sbjct: 177 KICGEVTHLARHC 189
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 10/97 (10%)
Query: 181 QTCYNCGEEGHMAVNC--RSAVKRKKPCFVCGSLEHGVRQCSKAQD--------CFICKK 230
+ C C E GH NC + KK C+ CG H + +C K + CF+CK+
Sbjct: 95 KICLLCRERGHSMKNCPDKGDGDLKKFCYNCGESGHSLSKCPKPIENGGTNFASCFVCKQ 154
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
GH +KDCP+ + C CG+ H C N
Sbjct: 155 QGHLSKDCPESTHGIYPKGGCCKICGEVTHLARHCPN 191
>gi|261205624|ref|XP_002627549.1| zinc knuckle transcription factor [Ajellomyces dermatitidis
SLH14081]
gi|239592608|gb|EEQ75189.1| zinc knuckle transcription factor [Ajellomyces dermatitidis
SLH14081]
Length = 473
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ----DCFICKKGGHRAKD 237
C NCG+ GH A +C K CF CG H +C+K + C IC+K GH A +
Sbjct: 41 ACRNCGQSGHFARDCTEPRKATGACFNCGEEGHNKAECTKPRVFKGHCRICEKEGHPASE 100
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
CP+K A VC C + GH C + D
Sbjct: 101 CPEK------PADVCKNCKEEGHKTMECTQNRKFD 129
>gi|154346046|ref|XP_001568960.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066302|emb|CAM44093.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 573
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 85/213 (39%), Gaps = 41/213 (19%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
CY C + GHM C + C+ CG+ H + C CF C GHR+ +CP +
Sbjct: 135 CYQCHQLGHMMTTCP-----QTRCYNCGTFGHSSQICHSKPHCFQCSHSGHRSSECPMRS 189
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC----------RNSYSLDDLKEVQCYICRCFGHLCCVN 292
K ++C +C + GH+ +C R + + EV C +C GH
Sbjct: 190 K-----GRLCYQCNEPGHEAANCPQGQLCRMCHRPGHFVARCPEVVCNLCHVKGH----- 239
Query: 293 ISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECV 352
+ V V C CG+ H +H C Q + A S G EC+
Sbjct: 240 -TAGVCDNVHCDNCGR-NHETVH---CHQ---QYMSPVTHARASE----GRSASLPSECI 287
Query: 353 SSSKVRKRNIDASTPTFRPHRENKDHSGIKSAP 385
S S V+ N S R +++ + G+++ P
Sbjct: 288 SDSAVQSNNSSMS----RAPDDDRSNHGVEAHP 316
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 65/192 (33%), Gaps = 57/192 (29%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
C NC GH+ NC + C +CK+ GH +DCP
Sbjct: 51 VCDNCKTRGHLRRNCPTI------------------------KCNLCKRLGHFRRDCPQD 86
Query: 242 HKSGFQNAQ----------------VCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCF 285
++A+ VC CG S H +C Y + ++CY C
Sbjct: 87 ASKRVRSAENAPCDDVNLDEEYRWSVCRNCGSSRHIQANCPVRY-----QALECYQCHQL 141
Query: 286 GHLCCVNISDAVPGEVSCFRCGQLGHTGL------HWNSCMQACARSRGETVEASPSSCY 339
GH+ P + C+ CG GH+ H C + RS + + CY
Sbjct: 142 GHM-----MTTCP-QTRCYNCGTFGHSSQICHSKPHCFQCSHSGHRSSECPMRSKGRLCY 195
Query: 340 NCGAEGHFAREC 351
C GH A C
Sbjct: 196 QCNEPGHEAANC 207
>gi|71747588|ref|XP_822849.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
gi|70832517|gb|EAN78021.1| universal minicircle sequence binding protein (UMSBP), putative
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|261332660|emb|CBH15655.1| predicted zinc finger protein [Trypanosoma brucei gambiense DAL972]
Length = 140
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 66/136 (48%), Gaps = 19/136 (13%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
+TCYNCG+ GHM+ C +A G++ G + C+ C + H ++DCP+
Sbjct: 11 RTCYNCGQPGHMSRECPNARSG-------GNMGGG-------RSCYNCGQPDHISRDCPN 56
Query: 241 KHKSG-FQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQ-CYICRCFGHLC--CVNI-SD 295
G + C CG GH C N+ S ++ + CY C+ GH+ C N +D
Sbjct: 57 ARTGGNMGGGRSCYNCGRPGHISRDCPNARSGGNMGGGRACYHCQQEGHIARECPNAPAD 116
Query: 296 AVPGEVSCFRCGQLGH 311
A G +CF CGQ GH
Sbjct: 117 AAAGGRACFNCGQPGH 132
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 14/101 (13%)
Query: 179 GWQTCYNCGEEGHMAVNCRSA-----VKRKKPCFVCGSLEHGVRQCSKAQD--------- 224
G ++CYNCG+ H++ +C +A + + C+ CG H R C A+
Sbjct: 37 GGRSCYNCGQPDHISRDCPNARTGGNMGGGRSCYNCGRPGHISRDCPNARSGGNMGGGRA 96
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
C+ C++ GH A++CP+ + C CG GH +C
Sbjct: 97 CYHCQQEGHIARECPNAPADAAAGGRACFNCGQPGHLSRAC 137
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 14/140 (10%)
Query: 218 QCSKAQDCFICKKGGHRAKDCPDKHKSG-FQNAQVCLKCGDSGHDMFSCRNSYSLDDLKE 276
Q S A+ C+ C + GH +++CP+ G + C CG H C N+ + ++
Sbjct: 6 QMSNARTCYNCGQPGHMSRECPNARSGGNMGGGRSCYNCGQPDHISRDCPNARTGGNMGG 65
Query: 277 VQ-CYICRCFGHLC--CVNISDA--VPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETV 331
+ CY C GH+ C N + G +C+ C Q GH + C + +
Sbjct: 66 GRSCYNCGRPGHISRDCPNARSGGNMGGGRACYHCQQEGHI-------ARECPNAPADAA 118
Query: 332 EASPSSCYNCGAEGHFAREC 351
A +C+NCG GH +R C
Sbjct: 119 -AGGRACFNCGQPGHLSRAC 137
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 13/76 (17%)
Query: 179 GWQTCYNCGEEGHMAVNCRSA-----VKRKKPCFVCGSLEHGVRQCSKA--------QDC 225
G ++CYNCG GH++ +C +A + + C+ C H R+C A + C
Sbjct: 65 GGRSCYNCGRPGHISRDCPNARSGGNMGGGRACYHCQQEGHIARECPNAPADAAAGGRAC 124
Query: 226 FICKKGGHRAKDCPDK 241
F C + GH ++ CP K
Sbjct: 125 FNCGQPGHLSRACPVK 140
>gi|395754126|ref|XP_003779713.1| PREDICTED: zinc finger CCHC domain-containing protein 13-like
[Pongo abelii]
Length = 170
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 66/149 (44%), Gaps = 30/149 (20%)
Query: 206 CFVCGSLEHGVRQCSKAQD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFS 264
C+ CG + C + C+ C + GH AKDC + + + Q C CG GH
Sbjct: 47 CYCCGESSRHAKNCVLLGNICYNCGRSGHIAKDCKEPKR---ERHQHCYTCGRLGHLARD 103
Query: 265 CRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACA 324
C D KE +CY C GH+ +V C+RCG++GH ++ +
Sbjct: 104 C------DRQKEQKCYSCGKLGHI------QKDCAQVKCYRCGEIGHVAINCS------- 144
Query: 325 RSRGETVEASPSSCYNCGAEGHFARECVS 353
+AS +CY CG GH AREC S
Sbjct: 145 -------KASQVNCYRCGKSGHLARECPS 166
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 60/124 (48%), Gaps = 25/124 (20%)
Query: 183 CYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQC--SKAQDCFICKKGGHRAKDCP 239
CYNCG GH+A +C+ + R + C+ CG L H R C K Q C+ C K GH KDC
Sbjct: 67 CYNCGRSGHIAKDCKEPKRERHQHCYTCGRLGHLARDCDRQKEQKCYSCGKLGHIQKDC- 125
Query: 240 DKHKSGFQNAQV-CLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVP 298
AQV C +CG+ GH +C + +V CY C GHL + P
Sbjct: 126 ---------AQVKCYRCGEIGHVAINCSKA------SQVNCYRCGKSGHL-----ARECP 165
Query: 299 GEVS 302
EV+
Sbjct: 166 SEVT 169
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CY CG GH+A +C ++++ C+ CG L H + C++ + C+ C + GH
Sbjct: 82 EPKRERHQHCYTCGRLGHLARDCDR--QKEQKCYSCGKLGHIQKDCAQVK-CYRCGEIGH 138
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + +QV C +CG SGH
Sbjct: 139 VAINCS-------KASQVNCYRCGKSGH 159
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 7/63 (11%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ--DCFICKKGGHRAKDC 238
Q CY+CG+ GH+ +C + VK C+ CG + H CSKA +C+ C K GH A++C
Sbjct: 110 QKCYSCGKLGHIQKDC-AQVK----CYRCGEIGHVAINCSKASQVNCYRCGKSGHLAREC 164
Query: 239 PDK 241
P +
Sbjct: 165 PSE 167
>gi|342887520|gb|EGU87002.1| hypothetical protein FOXB_02396 [Fusarium oxysporum Fo5176]
Length = 457
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 68/175 (38%), Gaps = 34/175 (19%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAK 236
DRG C NC E GH++ C + E R + CF C GHR +
Sbjct: 247 DRGVPLCLNCKELGHISKFC--------------TQEKTERSDAVKISCFNCGADGHRVR 292
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDA 296
DCP+ + C CG SGH C + V+C C GH
Sbjct: 293 DCPEPRV----DKNACKNCGKSGHRAADCEEP---PNPANVECRKCNEMGHF--AKDCPQ 343
Query: 297 VPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
G +C CGQ GH + C + R + S +C NC +GHF+REC
Sbjct: 344 GGGSRACRNCGQEGHIS-------KDCDQPR----DMSTVTCRNCEKQGHFSREC 387
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 54/138 (39%), Gaps = 17/138 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ-----DCFICKKGGHRAK 236
+C+NCG +GH +C K C CG H C + +C C + GH AK
Sbjct: 280 SCFNCGADGHRVRDCPEPRVDKNACKNCGKSGHRAADCEEPPNPANVECRKCNEMGHFAK 339
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNIS 294
DCP S + C CG GH C D+ V C C GH C
Sbjct: 340 DCPQGGGS-----RACRNCGQEGHISKDCDQPR---DMSTVTCRNCEKQGHFSRECPEPK 391
Query: 295 DAVPGEVSCFRCGQLGHT 312
D +V C C + GHT
Sbjct: 392 DW--SKVQCSNCQEYGHT 407
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 10/64 (15%)
Query: 206 CFVCG--SLEHGVRQCSKAQD--CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHD 261
CF CG H +C Q+ C CK+ GH K+CPDK +C CGD GH
Sbjct: 60 CFGCGETGFSHRRAECPNPQEMTCRFCKQPGHMIKECPDKP------PMICENCGDEGHM 113
Query: 262 MFSC 265
+C
Sbjct: 114 RKNC 117
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 11/99 (11%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD-----CFIC 228
+PP+ C C E GH A +C + C CG H + C + +D C C
Sbjct: 319 EPPNPANVECRKCNEMGHFAKDCPQG-GGSRACRNCGQEGHISKDCDQPRDMSTVTCRNC 377
Query: 229 KKGGHRAKDCPD-KHKSGFQNAQVCLKCGDSGHDMFSCR 266
+K GH +++CP+ K S Q C C + GH C+
Sbjct: 378 EKQGHFSRECPEPKDWSKVQ----CSNCQEYGHTKVRCK 412
>gi|401420036|ref|XP_003874507.1| universal minicircle sequence binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490743|emb|CBZ26007.1| universal minicircle sequence binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 182
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK-------AQDCFICKKGGH 233
++CYNCGE GHM+ +C S ++ K C+ CGS EH R+C+ + C+ C GH
Sbjct: 93 RSCYNCGETGHMSRDCPSE-RKPKSCYNCGSTEHLSRECTNEAKAGADTRSCYNCGGTGH 151
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGH 260
++DCP++ K + C CG + H
Sbjct: 152 MSRDCPNERK-----PKSCYNCGSTEH 173
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 12/111 (10%)
Query: 182 TCYNCGEEGHMAVNC-RSAVKRKKPCFVCGSLEHGVRQCS---KAQDCFICKKGGHRAKD 237
TCY CGE GHM+ +C R+A R C+ CG H R C K + C+ C H +++
Sbjct: 72 TCYKCGEAGHMSRSCPRAAATRS--CYNCGETGHMSRDCPSERKPKSCYNCGSTEHLSRE 129
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C ++ K+G + + C CG +GH C N + K CY C HL
Sbjct: 130 CTNEAKAG-ADTRSCYNCGGTGHMSRDCPN-----ERKPKSCYNCGSTEHL 174
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKR---KKPCFVCGSLEHGVRQCS---KAQDCFIC 228
P +R ++CYNCG H++ C + K + C+ CG H R C K + C+ C
Sbjct: 109 PSERKPKSCYNCGSTEHLSRECTNEAKAGADTRSCYNCGGTGHMSRDCPNERKPKSCYNC 168
Query: 229 KKGGHRAKDCPDKH 242
H +++CPD+H
Sbjct: 169 GSTEHLSRECPDRH 182
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 21/87 (24%)
Query: 274 LKEVQCYICRCFGHLCCVNISDAVP---GEVSCFRCGQLGHTGLHWNSCMQACARSRGET 330
+ + CY C GH+ S + P SC+ CG+ GH SR
Sbjct: 68 MSAITCYKCGEAGHM-----SRSCPRAAATRSCYNCGETGHM-------------SRDCP 109
Query: 331 VEASPSSCYNCGAEGHFARECVSSSKV 357
E P SCYNCG+ H +REC + +K
Sbjct: 110 SERKPKSCYNCGSTEHLSRECTNEAKA 136
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 51/118 (43%), Gaps = 22/118 (18%)
Query: 244 SGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGE--- 300
S +A C KCG++GH SC + + CY C GH+ S P E
Sbjct: 65 SIIMSAITCYKCGEAGHMSRSCPRAAATRS-----CYNCGETGHM-----SRDCPSERKP 114
Query: 301 VSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVR 358
SC+ CG H + +A A +R SCYNCG GH +R+C + K +
Sbjct: 115 KSCYNCGSTEHLSRECTNEAKAGADTR---------SCYNCGGTGHMSRDCPNERKPK 163
>gi|395146534|gb|AFN53688.1| putative actin-depolymerizing factor 12 [Linum usitatissimum]
Length = 388
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 12/119 (10%)
Query: 206 CFVCGSLEHGVRQCSKAQD------CFICKKGGHRAKDCPDKHKSGFQN--AQVCLKCGD 257
C++C +++H + C + + C +C++ GH K CP+K + G ++ A++C CG+
Sbjct: 75 CYICKAVDHIAKLCPQKAEWERDKICLLCRQRGHSLKRCPNK-RDGDESVGAKLCYNCGE 133
Query: 258 SGHDMFSCRNSYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGHTG 313
+GH + +C K C++C GHL C N + P SC CG + H
Sbjct: 134 TGHSLANCSQPIQDGGTKYASCFVCNEQGHLSKDCPKNANGIYPKGGSCKICGGVTHLA 192
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 14/136 (10%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDD-LKEVQCYICR 283
C+ICK H AK CP K+ ++ ++CL C GH + C N D+ + CY C
Sbjct: 75 CYICKAVDHIAKLCP--QKAEWERDKICLLCRQRGHSLKRCPNKRDGDESVGAKLCYNCG 132
Query: 284 CFGHL---CCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYN 340
GH C I D SCF C + GH + C ++ + SC
Sbjct: 133 ETGHSLANCSQPIQDGGTKYASCFVCNEQGHLS-------KDCPKN-ANGIYPKGGSCKI 184
Query: 341 CGAEGHFARECVSSSK 356
CG H AR+C +K
Sbjct: 185 CGGVTHLARDCPDKAK 200
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 36/77 (46%), Gaps = 12/77 (15%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVK----RKKPCFVCGSLEHGVRQCSKAQD--------CF 226
G + CYNCGE GH NC ++ + CFVC H + C K + C
Sbjct: 124 GAKLCYNCGETGHSLANCSQPIQDGGTKYASCFVCNEQGHLSKDCPKNANGIYPKGGSCK 183
Query: 227 ICKKGGHRAKDCPDKHK 243
IC H A+DCPDK K
Sbjct: 184 ICGGVTHLARDCPDKAK 200
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 11/118 (9%)
Query: 182 TCYNCGEEGHMAVNC--RSAVKRKKPCFVCGSLEHGVRQCSKAQD---------CFICKK 230
+CY C H+A C ++ +R K C +C H +++C +D C+ C +
Sbjct: 74 SCYICKAVDHIAKLCPQKAEWERDKICLLCRQRGHSLKRCPNKRDGDESVGAKLCYNCGE 133
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
GH +C + G C C + GH C + + K C IC HL
Sbjct: 134 TGHSLANCSQPIQDGGTKYASCFVCNEQGHLSKDCPKNANGIYPKGGSCKICGGVTHL 191
>gi|50422497|ref|XP_459816.1| DEHA2E11682p [Debaryomyces hansenii CBS767]
gi|49655484|emb|CAG88055.1| DEHA2E11682p [Debaryomyces hansenii CBS767]
Length = 172
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 74/184 (40%), Gaps = 35/184 (19%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRAK 236
+CY CGE GH+A NC+ + ++ C+ C H C + + C+ C GH
Sbjct: 8 SCYKCGEAGHLADNCQ---QEQRLCYNCRQPGHESNDCPAPKQATQKQCYSCGDLGHVQS 64
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQ---------CYICRCFGH 287
DCP + + C CG GH +C + + K CY C H
Sbjct: 65 DCPTQSQGA-----KCYNCGQFGHISKNCTEAGNESAKKPASSKLQKPATTCYKCGGPNH 119
Query: 288 LCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHF 347
D G V C+ CG+ GH NS S GE +CYNCG GH
Sbjct: 120 Y----ARDCQAGVVKCYACGKTGHISKDCNS------ASGGEFTS---KTCYNCGKSGHI 166
Query: 348 AREC 351
++EC
Sbjct: 167 SKEC 170
>gi|146104100|ref|XP_001469726.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|398024576|ref|XP_003865449.1| hypothetical protein, conserved [Leishmania donovani]
gi|134074096|emb|CAM72838.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|322503686|emb|CBZ38772.1| hypothetical protein, conserved [Leishmania donovani]
Length = 566
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 60/143 (41%), Gaps = 27/143 (18%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
CY C + GHM C + C+ CG+ H + C CF C GHR+ +CP +
Sbjct: 128 CYQCHQLGHMMTTCP-----QTRCYNCGTFGHSSQICHSKPHCFHCSHSGHRSSECPMRS 182
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC----------RNSYSLDDLKEVQCYICRCFGHLCCVN 292
K +VC +C + GH+ +C R + + EV C +C GH
Sbjct: 183 K-----GRVCYQCNEPGHEAANCPQGQLCRMCHRPGHFVAHCPEVVCNLCHVKGH----- 232
Query: 293 ISDAVPGEVSCFRCGQLGHTGLH 315
+ V V C CG+ H +H
Sbjct: 233 -TAGVCDNVHCDNCGR-NHETVH 253
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 63/168 (37%), Gaps = 34/168 (20%)
Query: 206 CFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQ--------------- 250
C C + H R C K + C +CK+ GH +DCP ++ +
Sbjct: 45 CDNCKTRGHLRRNCPKIK-CNLCKRLGHYRRDCPQDASKRVRSVEGAPHEEVNLDEEYRW 103
Query: 251 -VCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQL 309
VC CG S H +C Y + ++CY C GH+ P + C+ CG
Sbjct: 104 SVCRHCGSSRHIQANCPVRY-----QALECYQCHQLGHM-----MTTCP-QTRCYNCGTF 152
Query: 310 GHTGL------HWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
GH+ H C + RS + + CY C GH A C
Sbjct: 153 GHSSQICHSKPHCFHCSHSGHRSSECPMRSKGRVCYQCNEPGHEAANC 200
>gi|392863891|gb|EAS35332.2| zinc knuckle transcription factor [Coccidioides immitis RS]
Length = 482
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ-----DCFICKKGGHRAKD 237
C C E GH A +C K C CG+ +H +QC + + +C C++ GH AKD
Sbjct: 294 CVICKEIGHRARDCIQPRIDKSGCRNCGNPDHHAKQCPEPRSAEGVECKKCQQVGHFAKD 353
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAV 297
CP+K N++ C CG+ GH C ++D+ V C C GH+ +
Sbjct: 354 CPEKG----VNSRACRNCGEEGHMSKECDKPRNMDN---VTCRNCEKTGHMSRDCPEEKD 406
Query: 298 PGEVSCFRCGQLGHT 312
+V C C ++GHT
Sbjct: 407 WSKVQCTNCKEMGHT 421
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 39/95 (41%), Gaps = 10/95 (10%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ----DCFICKKGGHRAKD 237
C+NCG+ GH + C K CF CG H +C + C IC+ GH A +
Sbjct: 51 ACHNCGQPGHFSRECPEPRKASGACFNCGEEGHNKAECPNPRVFKGTCRICQAEGHPAFE 110
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
CPDK VC C GH C + D
Sbjct: 111 CPDKA------PDVCKNCKGEGHKTKDCTENRKFD 139
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 176 PDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCS-KAQD-CFICKKGGH 233
P + C+NCGEEGH C + K C +C + H +C KA D C CK GH
Sbjct: 68 PRKASGACFNCGEEGHNKAECPNPRVFKGTCRICQAEGHPAFECPDKAPDVCKNCKGEGH 127
Query: 234 RAKDCPDKHK 243
+ KDC + K
Sbjct: 128 KTKDCTENRK 137
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 51/132 (38%), Gaps = 28/132 (21%)
Query: 252 CLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGH 311
C CG+ GH C+ + + EV+C IC+ GH I + + C CG H
Sbjct: 267 CDNCGEIGHTRRGCKQEPATVERVEVKCVICKEIGHRARDCIQPRI-DKSGCRNCGNPDH 325
Query: 312 -----------TGLHWNSCMQACARSRGETVEASPS------SCYNCGAEGHFARECVSS 354
G+ C Q G + P +C NCG EGH ++EC
Sbjct: 326 HAKQCPEPRSAEGVECKKCQQV-----GHFAKDCPEKGVNSRACRNCGEEGHMSKEC--- 377
Query: 355 SKVRKRNIDAST 366
+ RN+D T
Sbjct: 378 --DKPRNMDNVT 387
>gi|255947154|ref|XP_002564344.1| Pc22g03000 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591361|emb|CAP97588.1| Pc22g03000 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 487
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 62/143 (43%), Gaps = 15/143 (10%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ-----DCFICKKG 231
DR C NC GH +CR + K C CGS+EH +C++ + +C C +
Sbjct: 303 DRTEIKCSNCDGVGHRVRDCRQQRRNKHGCRNCGSVEHIASECTEPRSAADVECRKCNET 362
Query: 232 GHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC-- 289
GH AKDCP+ G + C CG H C D+ V C C GH
Sbjct: 363 GHFAKDCPNVADRG---PRTCRNCGSEDHIARDCDQPR---DVSTVTCRNCEKTGHYSRD 416
Query: 290 CVNISDAVPGEVSCFRCGQLGHT 312
C D +V C CG++GHT
Sbjct: 417 CDQPKDW--SKVQCKNCGEMGHT 437
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ----DCFICKKGGHRAK 236
+ CYNCG+EGH C ++ CF CG H +C+K + C IC+K GH A
Sbjct: 65 RACYNCGQEGHSKAEC-PEPRKTGSCFNCGQEGHSKSECTKPRVFKGTCRICEKEGHPAV 123
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
DCP++ VC C GH C+ + D
Sbjct: 124 DCPER------PPDVCKNCQTEGHKTMECKENRKFD 153
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 183 CYNCGEEGHMAVNCRSAVKR-KKPCFVCGSLEHGVRQCSKAQD-----CFICKKGGHRAK 236
C C E GH A +C + R + C CGS +H R C + +D C C+K GH ++
Sbjct: 356 CRKCNETGHFAKDCPNVADRGPRTCRNCGSEDHIARDCDQPRDVSTVTCRNCEKTGHYSR 415
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKE 276
DC D+ K + Q C CG+ GH + CR D E
Sbjct: 416 DC-DQPKD-WSKVQ-CKNCGEMGHTVVRCRQPKDKDPQDE 452
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 62/173 (35%), Gaps = 23/173 (13%)
Query: 221 KAQDCFICKKGGHRAKDCPDKHKSGFQNAQV-CLKCGDSGHDMFSCRNSYSLDDLKEVQC 279
K C C + GH ++ C ++ G ++ C C GH + CR + C
Sbjct: 277 KVPKCLNCGELGHISRSCKEERADGNDRTEIKCSNCDGVGHRVRDCRQQRR----NKHGC 332
Query: 280 YICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCY 339
C H+ +V C +C + GH A+ + P +C
Sbjct: 333 RNCGSVEHIASECTEPRSAADVECRKCNETGHF-----------AKDCPNVADRGPRTCR 381
Query: 340 NCGAEGHFARECVSSSKVRKRNIDASTPTFRPHRENKDHSGIKSAPHDLGKVH 392
NCG+E H AR+C D ST T R + +S P D KV
Sbjct: 382 NCGSEDHIARDCDQPR-------DVSTVTCRNCEKTGHYSRDCDQPKDWSKVQ 427
>gi|395146475|gb|AFN53632.1| actin-depolymerizing factor 12 [Linum usitatissimum]
Length = 359
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 12/119 (10%)
Query: 206 CFVCGSLEHGVRQCSKAQD------CFICKKGGHRAKDCPDKHKSGFQN--AQVCLKCGD 257
C++C +++H + C + + C +C++ GH K CP+K + G ++ A++C CG+
Sbjct: 78 CYICKAVDHIAKLCPQKAEWERDKICLLCRQRGHSLKRCPNK-RDGDESIGAKLCYNCGE 136
Query: 258 SGHDMFSCRNSYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGHTG 313
+GH + +C K C++C GHL C N + P SC CG + H
Sbjct: 137 TGHSLANCSQPIQDGGTKYASCFVCNEQGHLSKDCPKNANGIYPKGGSCKICGGVTHLA 195
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 14/136 (10%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDD-LKEVQCYICR 283
C+ICK H AK CP K+ ++ ++CL C GH + C N D+ + CY C
Sbjct: 78 CYICKAVDHIAKLCP--QKAEWERDKICLLCRQRGHSLKRCPNKRDGDESIGAKLCYNCG 135
Query: 284 CFGHL---CCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYN 340
GH C I D SCF C + GH + C ++ + SC
Sbjct: 136 ETGHSLANCSQPIQDGGTKYASCFVCNEQGHLS-------KDCPKN-ANGIYPKGGSCKI 187
Query: 341 CGAEGHFARECVSSSK 356
CG H AR+C +K
Sbjct: 188 CGGVTHLARDCPDKAK 203
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 36/77 (46%), Gaps = 12/77 (15%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVK----RKKPCFVCGSLEHGVRQCSKAQD--------CF 226
G + CYNCGE GH NC ++ + CFVC H + C K + C
Sbjct: 127 GAKLCYNCGETGHSLANCSQPIQDGGTKYASCFVCNEQGHLSKDCPKNANGIYPKGGSCK 186
Query: 227 ICKKGGHRAKDCPDKHK 243
IC H A+DCPDK K
Sbjct: 187 ICGGVTHLARDCPDKAK 203
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 11/118 (9%)
Query: 182 TCYNCGEEGHMAVNC--RSAVKRKKPCFVCGSLEHGVRQCSKAQD---------CFICKK 230
+CY C H+A C ++ +R K C +C H +++C +D C+ C +
Sbjct: 77 SCYICKAVDHIAKLCPQKAEWERDKICLLCRQRGHSLKRCPNKRDGDESIGAKLCYNCGE 136
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
GH +C + G C C + GH C + + K C IC HL
Sbjct: 137 TGHSLANCSQPIQDGGTKYASCFVCNEQGHLSKDCPKNANGIYPKGGSCKICGGVTHL 194
>gi|154345720|ref|XP_001568797.1| universal minicircle sequence binding protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134066139|emb|CAM43929.1| universal minicircle sequence binding protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|449310608|gb|AGE92531.1| universal minicircle sequence binding protein [Leishmania
braziliensis]
Length = 115
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK-------AQDCFICKKGGH 233
++CYNCGE GHM+ +C S ++ K CF CGS EH R+C+ + C+ C GH
Sbjct: 26 RSCYNCGETGHMSRDCPSE-RKPKSCFNCGSTEHLSRECTNEAKAGADTRSCYNCGGTGH 84
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGH 260
++DCP++ K + C CG + H
Sbjct: 85 MSRDCPNERK-----PKSCYNCGSTEH 106
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCS---KAQDCFICKKGGHRAKDC 238
TCY CGE GHM+ +C V + C+ CG H R C K + CF C H +++C
Sbjct: 5 TCYKCGEAGHMSRSC-PRVAATRSCYNCGETGHMSRDCPSERKPKSCFNCGSTEHLSREC 63
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
++ K+G + + C CG +GH C N + K CY C HL
Sbjct: 64 TNEAKAG-ADTRSCYNCGGTGHMSRDCPN-----ERKPKSCYNCGSTEHL 107
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKR---KKPCFVCGSLEHGVRQCS---KAQDCFIC 228
P +R ++C+NCG H++ C + K + C+ CG H R C K + C+ C
Sbjct: 42 PSERKPKSCFNCGSTEHLSRECTNEAKAGADTRSCYNCGGTGHMSRDCPNERKPKSCYNC 101
Query: 229 KKGGHRAKDCPDKH 242
H +++CPD+H
Sbjct: 102 GSTEHLSRECPDRH 115
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 15/84 (17%)
Query: 274 LKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEA 333
+ + CY C GH+ V SC+ CG+ GH SR E
Sbjct: 1 MSALTCYKCGEAGHM--SRSCPRVAATRSCYNCGETGHM-------------SRDCPSER 45
Query: 334 SPSSCYNCGAEGHFARECVSSSKV 357
P SC+NCG+ H +REC + +K
Sbjct: 46 KPKSCFNCGSTEHLSRECTNEAKA 69
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 22/115 (19%)
Query: 247 QNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGE---VSC 303
+A C KCG++GH SC + CY C GH+ S P E SC
Sbjct: 1 MSALTCYKCGEAGHMSRSCPRVAATR-----SCYNCGETGHM-----SRDCPSERKPKSC 50
Query: 304 FRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVR 358
F CG H + +A A +R SCYNCG GH +R+C + K +
Sbjct: 51 FNCGSTEHLSRECTNEAKAGADTR---------SCYNCGGTGHMSRDCPNERKPK 96
>gi|71418282|ref|XP_810805.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
cruzi strain CL Brener]
gi|16225904|gb|AAL16022.1|AF420314_1 zinc finger protein PDZ5 [Trypanosoma cruzi]
gi|70875394|gb|EAN88954.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
cruzi]
Length = 134
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 37/146 (25%)
Query: 178 RGWQTCYNCGEEGHMAVNCRS---AVKRKKPCFVCGSLEHGVRQCSKA-------QDCFI 227
RG + CYNCG+ GH++ C + V + C+ CG + H R+C + C+
Sbjct: 8 RGSRACYNCGQPGHLSRECPTRPPGVMGDRACYNCGRMGHLSRECPTRPPGVMGDRACYN 67
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGH 287
C + GH +++CP++ GF+ + CY C+ GH
Sbjct: 68 CGRMGHLSRECPNRPAGGFRG-------------------------VARGACYHCQQEGH 102
Query: 288 LCCVNISDAVP-GEVSCFRCGQLGHT 312
L + +A P GE +C+ CGQ GHT
Sbjct: 103 L-ARDCPNAPPGGERACYNCGQTGHT 127
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 16/100 (16%)
Query: 179 GWQTCYNCGEEGHMAVNCRS---AVKRKKPCFVCGSLEHGVRQCSKAQ----------DC 225
G + CYNCG GH++ C + V + C+ CG + H R+C C
Sbjct: 35 GDRACYNCGRMGHLSRECPTRPPGVMGDRACYNCGRMGHLSRECPNRPAGGFRGVARGAC 94
Query: 226 FICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
+ C++ GH A+DCP+ G + C CG +GH +C
Sbjct: 95 YHCQQEGHLARDCPNAPPGG---ERACYNCGQTGHTSRAC 131
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 9/116 (7%)
Query: 247 QNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVPGEVSCF 304
+ ++ C CG GH C + + + CY C GHL C V G+ +C+
Sbjct: 8 RGSRACYNCGQPGHLSREC-PTRPPGVMGDRACYNCGRMGHLSRECPTRPPGVMGDRACY 66
Query: 305 RCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVRKR 360
CG++GH + R G + +CY+C EGH AR+C ++ +R
Sbjct: 67 NCGRMGHLSRECPN------RPAGGFRGVARGACYHCQQEGHLARDCPNAPPGGER 116
>gi|85098402|ref|XP_960605.1| hypothetical protein NCU08923 [Neurospora crassa OR74A]
gi|28922111|gb|EAA31369.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 183
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 72/160 (45%), Gaps = 29/160 (18%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKAQ-------DC 225
D P++G CYNCG EGHM+ +C K + C+ CG H R CS++ +C
Sbjct: 25 DCPNKGAAKCYNCGNEGHMSRDCPEGPKDNARTCYRCGQTGHISRDCSQSGGGQSSGAEC 84
Query: 226 FICKKGGHRAKDCPD---KHKSGFQNA----------QVCLKCGDSGHDMFSCRNSYSLD 272
+ C + GH A++C + G+QN+ + C CG GH S D
Sbjct: 85 YKCGEVGHIARNCSKGGASYGGGYQNSGYGGGFGGPQKTCYSCGGIGH--------MSRD 136
Query: 273 DLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHT 312
+ +CY C GH D+ GE C++C Q GH
Sbjct: 137 CVNGSKCYNCGESGHFSRDCPKDSGSGEKICYKCQQPGHV 176
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 72/172 (41%), Gaps = 38/172 (22%)
Query: 198 SAVKRKKPCFVCGSLEHGVRQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKC 255
+A + + CF CG H R C A C+ C GH ++DCP+ K NA+ C +C
Sbjct: 5 AAPQGTRACFTCGQTTHQARDCPNKGAAKCYNCGNEGHMSRDCPEGPK---DNARTCYRC 61
Query: 256 GDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVPG-------------- 299
G +GH C S +CY C GH+ C + G
Sbjct: 62 GQTGHISRDCSQS-GGGQSSGAECYKCGEVGHIARNCSKGGASYGGGYQNSGYGGGFGGP 120
Query: 300 EVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
+ +C+ CG +GH SR + V S CYNCG GHF+R+C
Sbjct: 121 QKTCYSCGGIGHM-------------SR-DCVNGS--KCYNCGESGHFSRDC 156
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 42/100 (42%), Gaps = 20/100 (20%)
Query: 183 CYNCGEEGHMAVNC-----------------RSAVKRKKPCFVCGSLEHGVRQCSKAQDC 225
CY CGE GH+A NC +K C+ CG + H R C C
Sbjct: 84 CYKCGEVGHIARNCSKGGASYGGGYQNSGYGGGFGGPQKTCYSCGGIGHMSRDCVNGSKC 143
Query: 226 FICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
+ C + GH ++DCP SG ++C KC GH C
Sbjct: 144 YNCGESGHFSRDCPKDSGSG---EKICYKCQQPGHVQSQC 180
>gi|358386406|gb|EHK24002.1| hypothetical protein TRIVIDRAFT_138406, partial [Trichoderma virens
Gv29-8]
Length = 194
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 74/199 (37%), Gaps = 42/199 (21%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
+ CY CG GH A C SA ++ C+ C H C ++A+ C+ C+ GH
Sbjct: 7 RACYKCGNVGHYAEVCSSA---ERLCYNCKQPGHESNGCPLPRSTEAKQCYHCQGLGHVQ 63
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN-----------------------SYSLD 272
DCP SG + C CG GH +C N +
Sbjct: 64 ADCPTLRLSGTATSGRCYNCGQPGHLARACPNPGNAGMGRGAPIGRGGFVGGYGRGGFAN 123
Query: 273 DLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVE 332
+ CY C H D + C+ CG+LGH + C G +
Sbjct: 124 GPRPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI-------SRDCTAPNGGPLN 172
Query: 333 ASPSSCYNCGAEGHFAREC 351
+ +CY CG GH +R+C
Sbjct: 173 TAGKTCYQCGEAGHISRDC 191
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 12/69 (17%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC---------SKAQDCFICKKGG 232
TCY CG H A +C++ + C+ CG L H R C + + C+ C + G
Sbjct: 129 TCYKCGGPNHFARDCQAQAMK---CYACGKLGHISRDCTAPNGGPLNTAGKTCYQCGEAG 185
Query: 233 HRAKDCPDK 241
H ++DCP K
Sbjct: 186 HISRDCPQK 194
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 61/155 (39%), Gaps = 23/155 (14%)
Query: 203 KKPCFVCGSLEHGVRQCSKAQD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHD 261
++ C+ CG++ H CS A+ C+ CK+ GH + CP + A+ C C GH
Sbjct: 6 RRACYKCGNVGHYAEVCSSAERLCYNCKQPGHESNGCPLPRST---EAKQCYHCQGLGHV 62
Query: 262 MFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQ 321
C +CY C GHL + A P G+ G+ + +
Sbjct: 63 QADCPTLRLSGTATSGRCYNCGQPGHL-----ARACPNP---------GNAGMGRGAPIG 108
Query: 322 ACARSRGETVEAS-----PSSCYNCGAEGHFAREC 351
G P++CY CG HFAR+C
Sbjct: 109 RGGFVGGYGRGGFANGPRPATCYKCGGPNHFARDC 143
>gi|241955521|ref|XP_002420481.1| zinc finger protein, putative [Candida dubliniensis CD36]
gi|223643823|emb|CAX41560.1| zinc finger protein, putative [Candida dubliniensis CD36]
Length = 175
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 77/209 (36%), Gaps = 76/209 (36%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
+TCY CGE GH+A +C+ + C+ C K GH + DCPD
Sbjct: 7 RTCYKCGEVGHLADDCQQEERL----------------------CYNCHKPGHESNDCPD 44
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGE 300
++ A+ C CGD GH C N + +CY C FGH+ DA P
Sbjct: 45 PKQN---TAKQCYSCGDVGHIQTECPN-----QAQGAKCYNCGQFGHI--SKNCDAAPSS 94
Query: 301 ------------------------------------VSCFRCGQLGHTGLHWNSCMQACA 324
V C+ CG++GH +S
Sbjct: 95 TDHAPSFKRSSGRASGTTCYKCGGPNHFARDCQANTVKCYACGKVGHISKDCHS------ 148
Query: 325 RSRGETVEASPSSCYNCGAEGHFARECVS 353
+ G A +CYNCG GH ++EC +
Sbjct: 149 AAGGSNFSAK--TCYNCGKSGHISKECTA 175
>gi|327348756|gb|EGE77613.1| zinc knuckle transcription factor [Ajellomyces dermatitidis ATCC
18188]
Length = 485
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ----DCFICKKGGHRAKD 237
C NCG+ GH A +C K CF CG H +C+K + C IC+K GH A +
Sbjct: 41 ACRNCGQSGHFARDCTEPRKATGACFNCGEEGHNKAECTKPRVFKGHCRICEKEGHPASE 100
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
CP+K A VC C + GH C + D
Sbjct: 101 CPEKP------ADVCKNCKEEGHKTMECTQNRKFD 129
>gi|154345718|ref|XP_001568796.1| putative universal minicircle sequence binding protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134066138|emb|CAM43928.1| putative universal minicircle sequence binding protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|449310630|gb|AGE92542.1| universal minicircle sequence binding protein [Leishmania
braziliensis]
Length = 115
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK-------AQDCFICKKGGH 233
++CYNCGE GHM+ +C S ++ K CF CGS EH R+C+ + C+ C GH
Sbjct: 26 RSCYNCGETGHMSRDCPSE-RKPKSCFNCGSTEHLSRECTNEAKAGADTRSCYNCGGTGH 84
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGH 260
++DCP++ K + C CG + H
Sbjct: 85 LSRDCPNERK-----PKSCYNCGSTEH 106
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCS---KAQDCFICKKGGHRAKDC 238
TCY CGE GHM+ +C V + C+ CG H R C K + CF C H +++C
Sbjct: 5 TCYKCGEAGHMSRSC-PRVAATRSCYNCGETGHMSRDCPSERKPKSCFNCGSTEHLSREC 63
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
++ K+G + + C CG +GH C N + K CY C HL
Sbjct: 64 TNEAKAG-ADTRSCYNCGGTGHLSRDCPN-----ERKPKSCYNCGSTEHL 107
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 22/115 (19%)
Query: 247 QNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGE---VSC 303
+A C KCG++GH SC + CY C GH+ S P E SC
Sbjct: 1 MSALTCYKCGEAGHMSRSCPRVAATR-----SCYNCGETGHM-----SRDCPSERKPKSC 50
Query: 304 FRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVR 358
F CG H + +A A +R SCYNCG GH +R+C + K +
Sbjct: 51 FNCGSTEHLSRECTNEAKAGADTR---------SCYNCGGTGHLSRDCPNERKPK 96
>gi|403216232|emb|CCK70729.1| hypothetical protein KNAG_0F00600 [Kazachstania naganishii CBS
8797]
Length = 157
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 60/134 (44%), Gaps = 15/134 (11%)
Query: 183 CYNCGEEGHMAVNCRSA-VKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
CYNCG+ GH+ C K C+ CG H +CS Q CF C + GH +KDC +
Sbjct: 25 CYNCGQPGHVQSECTLPRTVEHKQCYNCGETGHVKSECS-VQRCFNCNQTGHISKDCTEP 83
Query: 242 HKSGFQNA----QVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAV 297
K Q A C KCG H C+ ++ +CY C FGH+
Sbjct: 84 RKPRAQAAGGRGMSCYKCGGPNHLARDCQQ-------EDTKCYSCGNFGHI--SRDCPDG 134
Query: 298 PGEVSCFRCGQLGH 311
PG+ C+ C Q GH
Sbjct: 135 PGDKVCYNCNQSGH 148
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 14/89 (15%)
Query: 181 QTCYNCGEEGHMAVNC--------RSAVKRKKPCFVCGSLEHGVRQCSKA-QDCFICKKG 231
Q C+NC + GH++ +C ++A R C+ CG H R C + C+ C
Sbjct: 65 QRCFNCNQTGHISKDCTEPRKPRAQAAGGRGMSCYKCGGPNHLARDCQQEDTKCYSCGNF 124
Query: 232 GHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
GH ++DCPD +VC C SGH
Sbjct: 125 GHISRDCPDG-----PGDKVCYNCNQSGH 148
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 64/171 (37%), Gaps = 36/171 (21%)
Query: 204 KPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDC----PDKHKSGFQ-----------N 248
K CFVCG + H +C + C+ C + GH +C +HK + +
Sbjct: 4 KACFVCGKIGHLAEECDSDKLCYNCGQPGHVQSECTLPRTVEHKQCYNCGETGHVKSECS 63
Query: 249 AQVCLKCGDSGHDMFSC----RNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCF 304
Q C C +GH C + + + CY C HL D + C+
Sbjct: 64 VQRCFNCNQTGHISKDCTEPRKPRAQAAGGRGMSCYKCGGPNHL----ARDCQQEDTKCY 119
Query: 305 RCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSS 355
CG GH + C G+ V CYNC GH +R+C ++
Sbjct: 120 SCGNFGHIS-------RDCPDGPGDKV------CYNCNQSGHISRDCPETA 157
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 168 RGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA---QD 224
R PR RG +CY CG H+A +C+ + C+ CG+ H R C +
Sbjct: 84 RKPRAQAAGGRGM-SCYKCGGPNHLARDCQ---QEDTKCYSCGNFGHISRDCPDGPGDKV 139
Query: 225 CFICKKGGHRAKDCPD 240
C+ C + GH ++DCP+
Sbjct: 140 CYNCNQSGHISRDCPE 155
>gi|354544631|emb|CCE41356.1| hypothetical protein CPAR2_303450 [Candida parapsilosis]
Length = 180
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 74/176 (42%), Gaps = 48/176 (27%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
+TCY CGE GH+A +C + C+ C+K GH + DCP+
Sbjct: 7 RTCYKCGEAGHVADDCTQEERL----------------------CYNCRKPGHESGDCPE 44
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVP-G 299
++ ++ C CGD GH C N + +CY C FGH+ D P G
Sbjct: 45 PKQA---TSKQCYSCGDVGHIQSECPN-----QAQGAKCYNCGQFGHI--SKDCDQPPSG 94
Query: 300 EVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSS 355
+ FR ++ SRG AS ++CY CG HFAR+C + +
Sbjct: 95 QAPPFR---------------KSFGGSRGGGHSASGTTCYKCGGPNHFARDCQAGT 135
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 39/99 (39%), Gaps = 21/99 (21%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP--------------------CFVCGSLEHGVRQCSKA 222
CYNCG+ GH++ +C + P C+ CG H R C
Sbjct: 75 CYNCGQFGHISKDCDQPPSGQAPPFRKSFGGSRGGGHSASGTTCYKCGGPNHFARDCQAG 134
Query: 223 Q-DCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
C+ C K GH +KDC A+ C CG SGH
Sbjct: 135 TVKCYACGKPGHISKDCHSAAGGSNVAAKTCYNCGKSGH 173
>gi|380489650|emb|CCF36563.1| cellular nucleic acid-binding protein [Colletotrichum higginsianum]
Length = 275
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 64/138 (46%), Gaps = 19/138 (13%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ------DCFICKKGGHRA 235
TCYNCGEEGH +C + K C CG H V +C + + +C C + GH +
Sbjct: 99 TCYNCGEEGHRVRDCPTPRVDKFACKNCGQSGHKVSECPEPRKAGADVECNKCHEMGHFS 158
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNI 293
+DCP + G + C CG+ GH C + ++++C C GHL C
Sbjct: 159 RDCP---QGGGGGGRACHNCGNEGHMSREC------PEPRKIKCRNCDEEGHLSKDCDKP 209
Query: 294 SDAVPGEVSCFRCGQLGH 311
D + C CG++GH
Sbjct: 210 IDV--SRIKCNNCGEMGH 225
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 67/190 (35%), Gaps = 56/190 (29%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P R Q C NC E GH++ +C K + C+ C + GH
Sbjct: 64 EPVSRLMQKCSNCNELGHISKSCPQEAMEKARVTI---------------TCYNCGEEGH 108
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNI 293
R +DCP F C CG SGH + C
Sbjct: 109 RVRDCPTPRVDKF----ACKNCGQSGHKVSECPEPRKAG--------------------- 143
Query: 294 SDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVS 353
+V C +C ++GH +R + +C+NCG EGH +REC
Sbjct: 144 -----ADVECNKCHEMGHF-----------SRDCPQGGGGGGRACHNCGNEGHMSRECPE 187
Query: 354 SSKVRKRNID 363
K++ RN D
Sbjct: 188 PRKIKCRNCD 197
>gi|149036677|gb|EDL91295.1| cellular nucleic acid binding protein 1, isoform CRA_c [Rattus
norvegicus]
Length = 139
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 72/170 (42%), Gaps = 41/170 (24%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C+ CG GH A C + R + S+ + C+ C +GGH AKDC +
Sbjct: 6 CFKCGRSGHWARECPTGGGRGR------------GMRSRGRACYNCGRGGHIAKDCKEPK 53
Query: 243 KSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVS 302
+ + Q C CG GH C D E +CY C FGH+ D +V
Sbjct: 54 R---EREQCCYNCGKPGHLARDC------DHADEQKCYSCGEFGHI----QKDCT--KVK 98
Query: 303 CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECV 352
C+RCG+ GH ++ + + S +CY CG GH AREC
Sbjct: 99 CYRCGETGHVAINCS--------------KTSEVNCYRCGESGHLARECT 134
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KDC
Sbjct: 35 ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDC 94
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C +CG++GH +C + EV CY C GHL
Sbjct: 95 ---------TKVKCYRCGETGHVAINCSKT------SEVNCYRCGESGHL 129
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH
Sbjct: 51 EPKREREQCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGETGH 107
Query: 234 RAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
A +C + ++V C +CG+SGH
Sbjct: 108 VAINCS-------KTSEVNCYRCGESGH 128
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 56/163 (34%), Gaps = 61/163 (37%)
Query: 206 CFVCGSLEHGVRQC-----------SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLK 254
CF CG H R+C S+ + C+ C +GGH AKDC + + + Q C
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRACYNCGRGGHIAKDCKEPKR---EREQCCYN 62
Query: 255 CGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGL 314
CG GH C D E +CY C FGH+
Sbjct: 63 CGKPGHLARDC------DHADEQKCYSCGEFGHI-------------------------- 90
Query: 315 HWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKV 357
+ + CY CG GH A C +S+V
Sbjct: 91 ---------------QKDCTKVKCYRCGETGHVAINCSKTSEV 118
>gi|297796051|ref|XP_002865910.1| zinc knuckle (CCHC-type) family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311745|gb|EFH42169.1| zinc knuckle (CCHC-type) family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 268
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 14/117 (11%)
Query: 206 CFVCGSLEHGVRQCSKAQD------CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSG 259
CF+C S H + C + + C C++ GH K+CP+K+ + ++C CGD+G
Sbjct: 76 CFICHSKTHIAKLCPEKSEWERNKICLQCRRRGHSLKNCPEKNDESSEK-KLCYNCGDTG 134
Query: 260 HDMFSCRNSYSLDD--LKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
H + C Y L+D K C+IC+ GH+ C N P C CG + H
Sbjct: 135 HSLSHC--PYPLEDGGTKFASCFICKGQGHISKNCPQNKHGIYPMGGCCKVCGSVAH 189
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 40/101 (39%), Gaps = 11/101 (10%)
Query: 181 QTCYNCGEEGHMAVNC---RSAVKRKKPCFVCGSLEHGVRQC--------SKAQDCFICK 229
+ C C GH NC KK C+ CG H + C +K CFICK
Sbjct: 99 KICLQCRRRGHSLKNCPEKNDESSEKKLCYNCGDTGHSLSHCPYPLEDGGTKFASCFICK 158
Query: 230 KGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYS 270
GH +K+CP + C CG H + C + ++
Sbjct: 159 GQGHISKNCPQNKHGIYPMGGCCKVCGSVAHLVKDCPDKFN 199
>gi|212538011|ref|XP_002149161.1| zinc knuckle domain protein (Byr3), putative [Talaromyces marneffei
ATCC 18224]
gi|210068903|gb|EEA22994.1| zinc knuckle domain protein (Byr3), putative [Talaromyces marneffei
ATCC 18224]
Length = 183
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 81/197 (41%), Gaps = 45/197 (22%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVKRKKP-CFVCGSLEHGVRQCSKA---QDCFICKKGGHR 234
G + C+NCGE H A R K+ P C+ CG H R+C++A + C+ C + GH
Sbjct: 6 GSRGCFNCGEPSHQA---RDCPKKGTPTCYNCGGQGHVSRECTQAPKEKSCYRCGQTGHI 62
Query: 235 AKDCPDKHKSGFQN-------------AQVCLKCGDSGHDMFSCRN------SYSLDDLK 275
++DC +G N Q C KCG GH +C + +
Sbjct: 63 SRDCQQSAPAGGNNGGFSRGGFSGGAGGQECYKCGQVGHIARNCSQGGSYGGGHGGFGGR 122
Query: 276 EVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASP 335
+ CY C +GH+ D G+ C+ CG++GH SR T EA+
Sbjct: 123 QQTCYSCGGYGHM----ARDCTQGQ-KCYNCGEVGHV-------------SRDCTTEANG 164
Query: 336 SS-CYNCGAEGHFAREC 351
CY C GH C
Sbjct: 165 ERVCYKCKQPGHVQSAC 181
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 14/97 (14%)
Query: 181 QTCYNCGEEGHMAVNC----------RSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKK 230
Q CY CG+ GH+A NC R++ C+ CG H R C++ Q C+ C +
Sbjct: 91 QECYKCGQVGHIARNCSQGGSYGGGHGGFGGRQQTCYSCGGYGHMARDCTQGQKCYNCGE 150
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
GH ++DC + +VC KC GH +C N
Sbjct: 151 VGHVSRDCTTE----ANGERVCYKCKQPGHVQSACPN 183
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 57/155 (36%), Gaps = 31/155 (20%)
Query: 220 SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQC 279
S ++ CF C + H+A+DCP K C CG GH C + KE C
Sbjct: 5 SGSRGCFNCGEPSHQARDCPKK------GTPTCYNCGGQGHVSRECTQA-----PKEKSC 53
Query: 280 YICRCFGHLCCVNISDAVPG-----------------EVSCFRCGQLGHTGLHWNSCMQA 322
Y C GH+ + + P C++CGQ+GH + N
Sbjct: 54 YRCGQTGHIS-RDCQQSAPAGGNNGGFSRGGFSGGAGGQECYKCGQVGH--IARNCSQGG 110
Query: 323 CARSRGETVEASPSSCYNCGAEGHFARECVSSSKV 357
+CY+CG GH AR+C K
Sbjct: 111 SYGGGHGGFGGRQQTCYSCGGYGHMARDCTQGQKC 145
>gi|429862592|gb|ELA37234.1| zinc knuckle transcription factor [Colletotrichum gloeosporioides
Nara gc5]
Length = 460
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 61/137 (44%), Gaps = 19/137 (13%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ-----DCFICKKGGHRAK 236
TCYNCGEEGH +C + K C CG H V +C++ + +C C + GH +
Sbjct: 285 TCYNCGEEGHRVRDCPTPRIDKFACKNCGQSRHKVSECTEPRSAEGVECNKCNEMGHFGR 344
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNIS 294
DCP G + C CG GH C + ++++C C GH C
Sbjct: 345 DCPTAGGGG----RSCHNCGQEGHISKECT------EPRKLKCRNCDEEGHHSRDCDKPQ 394
Query: 295 DAVPGEVSCFRCGQLGH 311
D + C CG++GH
Sbjct: 395 DVT--RIKCMNCGEMGH 409
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 66/190 (34%), Gaps = 58/190 (30%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P R Q C NC E GH A C K + C+ C + GH
Sbjct: 250 EPVSRLMQKCNNCDELGHTAKACPQDPNEKVRVTI---------------TCYNCGEEGH 294
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNI 293
R +DCP F C CG S H + C S +
Sbjct: 295 RVRDCPTPRIDKF----ACKNCGQSRHKVSECTEPRSAEG-------------------- 330
Query: 294 SDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVS 353
V C +C ++GH G C A R SC+NCG EGH ++EC
Sbjct: 331 -------VECNKCNEMGHFG---RDCPTAGGGGR---------SCHNCGQEGHISKECTE 371
Query: 354 SSKVRKRNID 363
K++ RN D
Sbjct: 372 PRKLKCRNCD 381
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 182 TCYNCGEEGHMAVNCRSAVKR-KKPCFVCGSLEHGVRQCSKAQD--CFICKKGGHRAKDC 238
C+NCG++GH +C K C CG H R C A C C + GH KDC
Sbjct: 44 ACFNCGQDGHNKADCPEPAKPFDGECKGCGQQGHMRRDCPDAPPMACRSCGEEGHIRKDC 103
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
P+K +VC C + GH + +C N +D
Sbjct: 104 PNK------PPEVCRNCHEEGHLVVNCENPRKID 131
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD-----CFICKKGGH 233
G ++C+NCG+EGH++ C RK C C H R C K QD C C + GH
Sbjct: 352 GGRSCHNCGQEGHISKECTEP--RKLKCRNCDEEGHHSRDCDKPQDVTRIKCMNCGEMGH 409
Query: 234 RAKDCPD 240
+ CP+
Sbjct: 410 KKYKCPN 416
>gi|67423413|dbj|BAD99524.1| VASA RNA helicase [Moina macrocopa]
Length = 843
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 58/137 (42%), Gaps = 5/137 (3%)
Query: 215 GVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDL 274
G RQ ++ CF C H +++CP+ K G + C CGDSGH C N
Sbjct: 194 GPRQGGGSRGCFNCGDTNHMSRECPNPKKEG-NSRGTCYNCGDSGHMSRECPNPKKESSS 252
Query: 275 KEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEAS 334
+ CY C+ GH+ + V C CG+ GH C G
Sbjct: 253 RGT-CYNCQQEGHMSKDCPNPKVERSRGCRNCGEDGHMA---RECPSKNGDGNGGGDRGG 308
Query: 335 PSSCYNCGAEGHFAREC 351
+C+NCG EGH +++C
Sbjct: 309 NRACFNCGEEGHQSKDC 325
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 14/114 (12%)
Query: 182 TCYNCGEEGHMAVNCRSA-VKRKKPCFVCGSLEHGVRQC-------------SKAQDCFI 227
TCYNC +EGHM+ +C + V+R + C CG H R+C + CF
Sbjct: 255 TCYNCQQEGHMSKDCPNPKVERSRGCRNCGEDGHMARECPSKNGDGNGGGDRGGNRACFN 314
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYI 281
C + GH++KDC S C +C + H C D K + Y+
Sbjct: 315 CGEEGHQSKDCEKPRTSKGGGGGACFRCQSTDHMAKDCPEPNVGPDGKPRESYV 368
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 73/183 (39%), Gaps = 40/183 (21%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVKR---KKPCFVCGSLEHGVRQCSKAQ-------DCFIC 228
G + C+NCG+ HM+ C + K + C+ CG H R+C + C+ C
Sbjct: 200 GSRGCFNCGDTNHMSRECPNPKKEGNSRGTCYNCGDSGHMSRECPNPKKESSSRGTCYNC 259
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
++ GH +KDCP+ + ++ C CG+ GH C + + +
Sbjct: 260 QQEGHMSKDCPNPK---VERSRGCRNCGEDGHMARECPSKNGDGNGGGDRGG-------- 308
Query: 289 CCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFA 348
+CF CG+ GH + C + R + +C+ C + H A
Sbjct: 309 -----------NRACFNCGEEGHQ-------SKDCEKPR-TSKGGGGGACFRCQSTDHMA 349
Query: 349 REC 351
++C
Sbjct: 350 KDC 352
>gi|116197715|ref|XP_001224669.1| hypothetical protein CHGG_07013 [Chaetomium globosum CBS 148.51]
gi|88178292|gb|EAQ85760.1| hypothetical protein CHGG_07013 [Chaetomium globosum CBS 148.51]
Length = 200
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 66/161 (40%), Gaps = 30/161 (18%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----------SKA 222
D P+RG CYNCG EGHM+ +C K K C+ CG H R C
Sbjct: 42 DCPNRGAAKCYNCGGEGHMSRDCPEGPKDTKTCYRCGQPGHISRNCPTDGGGGHSGGQSG 101
Query: 223 QDCFICKKGGHRAKDCPDKHKSGFQNA-----------QVCLKCGDSGHDMFSCRNSYSL 271
+C+ C + GH A++C + G + C CG GH S
Sbjct: 102 AECYKCGEIGHIARNCSKGNAYGGGYGGGGFGGGGYGQKTCYSCGGVGH--------VSR 153
Query: 272 DDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHT 312
D + +CY C GH+ ++ GE C++C Q GH
Sbjct: 154 DCVNGSKCYNCGVSGHVSRDCPKESTGGEKICYKCQQPGHV 194
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 42/100 (42%), Gaps = 18/100 (18%)
Query: 183 CYNCGEEGHMAVNC---------------RSAVKRKKPCFVCGSLEHGVRQCSKAQDCFI 227
CY CGE GH+A NC +K C+ CG + H R C C+
Sbjct: 104 CYKCGEIGHIARNCSKGNAYGGGYGGGGFGGGGYGQKTCYSCGGVGHVSRDCVNGSKCYN 163
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
C GH ++DCP + G ++C KC GH C N
Sbjct: 164 CGVSGHVSRDCPKESTGG---EKICYKCQQPGHVQSQCPN 200
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 52/139 (37%), Gaps = 28/139 (20%)
Query: 222 AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYI 281
A C+ C GH ++DCP+ G ++ + C +CG GH +C
Sbjct: 48 AAKCYNCGGEGHMSRDCPE----GPKDTKTCYRCGQPGHISRNCPTDGGGGHSGGQS--- 100
Query: 282 CRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHW---NSCMQACARSRGETVEASPSSC 338
C++CG++GH + N+ +C
Sbjct: 101 ------------------GAECYKCGEIGHIARNCSKGNAYGGGYGGGGFGGGGYGQKTC 142
Query: 339 YNCGAEGHFARECVSSSKV 357
Y+CG GH +R+CV+ SK
Sbjct: 143 YSCGGVGHVSRDCVNGSKC 161
>gi|338729303|ref|XP_001505024.3| PREDICTED: cellular nucleic acid-binding protein-like [Equus
caballus]
Length = 170
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 30/151 (19%)
Query: 206 CFVCGSLEHGVRQCSKAQD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFS 264
C+ CG H R C ++ C+ C + GH AKDC + + + Q C CG GH
Sbjct: 47 CYRCGESGHHARDCHLLENICYNCGRSGHIAKDCTEPKR---EREQCCYTCGRRGHLARD 103
Query: 265 CRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACA 324
C D ++ +CY C GH D +V C+RCG+ GH ++ +
Sbjct: 104 C------DRQEQQKCYSCGELGHF----QKDCT--QVKCYRCGETGHVAINCS------- 144
Query: 325 RSRGETVEASPSSCYNCGAEGHFARECVSSS 355
+ + +CY CG GH AREC + +
Sbjct: 145 -------KKNKVNCYRCGKPGHLARECPTEA 168
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 59/129 (45%), Gaps = 36/129 (27%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
CYNCG GH+A +C + ++ C C+ C + GH A+DC D+
Sbjct: 67 CYNCGRSGHIAKDCTEPKREREQC------------------CYTCGRRGHLARDC-DR- 106
Query: 243 KSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVS 302
Q Q C CG+ GH D +V+CY C GH V I+ + +V+
Sbjct: 107 ----QEQQKCYSCGELGHFQ---------KDCTQVKCYRCGETGH---VAINCSKKNKVN 150
Query: 303 CFRCGQLGH 311
C+RCG+ GH
Sbjct: 151 CYRCGKPGH 159
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
Q CY CG GH+A +C ++K C+ CG L H + C++ + C+ C + GH A +C
Sbjct: 89 QCCYTCGRRGHLARDCDRQEQQK--CYSCGELGHFQKDCTQVK-CYRCGETGHVAINCSK 145
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSC 265
K+K C +CG GH C
Sbjct: 146 KNKVN------CYRCGKPGHLAREC 164
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 7/61 (11%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ--DCFICKKGGHRAKDC 238
Q CY+CGE GH +C + VK C+ CG H CSK +C+ C K GH A++C
Sbjct: 110 QKCYSCGELGHFQKDC-TQVK----CYRCGETGHVAINCSKKNKVNCYRCGKPGHLAREC 164
Query: 239 P 239
P
Sbjct: 165 P 165
>gi|157877134|ref|XP_001686898.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68129973|emb|CAJ09281.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 566
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 60/143 (41%), Gaps = 27/143 (18%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
CY C + GHM C + C+ CG+ H + C CF C GHR+ +CP +
Sbjct: 128 CYQCHQLGHMMTTCP-----QTRCYNCGTFGHSSQICHSKPHCFHCSHSGHRSSECPMRS 182
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC----------RNSYSLDDLKEVQCYICRCFGHLCCVN 292
K +VC +C + GH+ +C R + + EV C +C GH
Sbjct: 183 K-----GRVCYQCNEPGHEAANCPQGQLCRMCHRPGHFVAHCPEVVCNLCHLKGH----- 232
Query: 293 ISDAVPGEVSCFRCGQLGHTGLH 315
+ V V C CG+ H +H
Sbjct: 233 -TAGVCDNVHCDNCGR-NHETVH 253
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 68/181 (37%), Gaps = 29/181 (16%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGG--HRAK 236
G C NC GH+ NC K C +C L H R C + + GG H
Sbjct: 41 GAVVCDNCKTRGHLRRNC-----PKIKCNLCKRLGHYRRDCPQDASKRVRSVGGAPHEEV 95
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDA 296
+ ++++ VC CG S H +C Y + ++CY C GH+
Sbjct: 96 NLDEEYR-----WSVCRNCGSSRHIQANCPVRY-----QALECYQCHQLGHM-----MTT 140
Query: 297 VPGEVSCFRCGQLGHTGL------HWNSCMQACARSRGETVEASPSSCYNCGAEGHFARE 350
P + C+ CG GH+ H C + RS + + CY C GH A
Sbjct: 141 CP-QTRCYNCGTFGHSSQICHSKPHCFHCSHSGHRSSECPMRSKGRVCYQCNEPGHEAAN 199
Query: 351 C 351
C
Sbjct: 200 C 200
>gi|407920706|gb|EKG13888.1| Zinc finger CCHC-type protein [Macrophomina phaseolina MS6]
Length = 347
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 60/145 (41%), Gaps = 28/145 (19%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
+CYNCG GH+ VNC A + Q+C+ C + GHR +CP+
Sbjct: 110 SCYNCGGHGHIKVNCPEAPRG-----------------GGGQECYGCGQVGHRKSECPN- 151
Query: 242 HKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV--QCYICRCFGHL---CCVNISDA 296
G + C CG GH C N D+ CY C GHL C I+ A
Sbjct: 152 ---GGGGGRACYNCGQYGHRKADCPNPSQGDNSGGGGRPCYNCGEIGHLKSECTNPINPA 208
Query: 297 VPG--EVSCFRCGQLGHTGLHWNSC 319
G + CF+C ++GH N C
Sbjct: 209 TGGGDDRLCFKCHKVGHMARDCNFC 233
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 52/153 (33%), Gaps = 53/153 (34%)
Query: 175 PPDRGWQTCYNCGEEGH-------------MAVNCRSAVKRK----------------KP 205
P G Q CY CG+ GH NC RK +P
Sbjct: 128 PRGGGGQECYGCGQVGHRKSECPNGGGGGRACYNCGQYGHRKADCPNPSQGDNSGGGGRP 187
Query: 206 CFVCGSLEHGVRQCSKAQD----------CFICKKGGHRAKDCPDKHKSGFQNAQVCLKC 255
C+ CG + H +C+ + CF C K GH A+DC C C
Sbjct: 188 CYNCGEIGHLKSECTNPINPATGGGDDRLCFKCHKVGHMARDC-----------NFCPNC 236
Query: 256 GDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
GH F C + D ++ C +C+ GH
Sbjct: 237 EQEGHGFFEC---HLKKDYSKITCTVCKEKGHT 266
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 43/129 (33%), Gaps = 36/129 (27%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
C+ C GH +CP+ + G Q C CG GH C N
Sbjct: 111 CYNCGGHGHIKVNCPEAPRGG--GGQECYGCGQVGHRKSECPNGGG-------------- 154
Query: 285 FGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAE 344
G +C+ CGQ GH C S+G+ CYNCG
Sbjct: 155 --------------GGRACYNCGQYGHRKA---DCPNP---SQGDNSGGGGRPCYNCGEI 194
Query: 345 GHFARECVS 353
GH EC +
Sbjct: 195 GHLKSECTN 203
>gi|443735051|gb|ELU18906.1| hypothetical protein CAPTEDRAFT_180220 [Capitella teleta]
Length = 651
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP-CFVCGSLEHGVRQCSKAQD-------CFICKKGGHR 234
CY CGE+GH A C SA C CG H R+C KA C C + GH
Sbjct: 50 CYKCGEDGHFARECPSAGGGGGGGCHKCGEEGHFARECPKAGGGGGGGRGCHKCGEEGHF 109
Query: 235 AKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNS 268
A++CP SG C KCG+ GH C NS
Sbjct: 110 ARECPSAGSSGGGGGSGCRKCGEEGHFARECPNS 143
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 11/74 (14%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP---CFVCGSLEHGVRQCSKAQD--------CFICKKG 231
C+ CGEEGH A C A C CG H R+C A C C +
Sbjct: 74 CHKCGEEGHFARECPKAGGGGGGGRGCHKCGEEGHFARECPSAGSSGGGGGSGCRKCGEE 133
Query: 232 GHRAKDCPDKHKSG 245
GH A++CP+ G
Sbjct: 134 GHFARECPNSEGGG 147
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 39/105 (37%), Gaps = 13/105 (12%)
Query: 252 CLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVPGEVSCFRCGQL 309
C KCG+ GH C S C+ C GH C G C +CG+
Sbjct: 50 CYKCGEDGHFARECP---SAGGGGGGGCHKCGEEGHFARECPKAGGGGGGGRGCHKCGEE 106
Query: 310 GHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
GH S + S C CG EGHFAREC +S
Sbjct: 107 GHFARECPSAGSSGGGGG--------SGCRKCGEEGHFARECPNS 143
>gi|320591584|gb|EFX04023.1| zinc knuckle nucleic acid-binding protein [Grosmannia clavigera
kw1407]
Length = 228
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 73/200 (36%), Gaps = 43/200 (21%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
+ CY CG GH A C SA ++ C+ C H C + A+ C+ C+ GH
Sbjct: 7 RACYKCGNVGHYAEVCSSA---ERLCYNCKQPGHESNGCPLPRTTDAKQCYHCQGLGHVQ 63
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN------------------------SYSL 271
DCP SG C CG GH +C +++
Sbjct: 64 ADCPTLRLSGAATGGRCYSCGQQGHLARACPTPNAAGLGRGVALPPRGGFAGYGRGGFAV 123
Query: 272 DDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETV 331
+ CY C H D + C+ CG+LGH + C G +
Sbjct: 124 GGPRPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI-------SRECTAPNGGPL 172
Query: 332 EASPSSCYNCGAEGHFAREC 351
+ +CY CG GH +R+C
Sbjct: 173 NTAGKTCYQCGEAGHISRDC 192
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 12/79 (15%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK---------AQDCFICKKGG 232
TCY CG H A +C++ + C+ CG L H R+C+ + C+ C + G
Sbjct: 130 TCYKCGGPNHFARDCQAQAMK---CYACGKLGHISRECTAPNGGPLNTAGKTCYQCGEAG 186
Query: 233 HRAKDCPDKHKSGFQNAQV 251
H ++DCP K+ +G +A++
Sbjct: 187 HISRDCPQKNTNGEVSAEI 205
>gi|241022874|ref|XP_002406044.1| cellular nucleic acid binding protein, putative [Ixodes scapularis]
gi|215491870|gb|EEC01511.1| cellular nucleic acid binding protein, putative [Ixodes scapularis]
Length = 239
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query: 182 TCYNCGEEGHMAVNCRSAV----KRKKPCFVCGSLEHGVRQCS-----KAQDCFICKKGG 232
C+ CGEEGHM+ +C SA + K+ CF CG H R C +++ CF C + G
Sbjct: 19 ACFKCGEEGHMSRDCPSAGGDGDRPKRGCFNCGEDGHMSRDCPNPKQERSKGCFKCGEEG 78
Query: 233 HRAKDCPDKHKSGFQN-AQVCLKCGDSGHDMFSCRN 267
H ++DCP + G + + C KC GH C N
Sbjct: 79 HMSRDCPTAGEGGDSDRPKGCFKCQQEGHMAKDCTN 114
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 10/72 (13%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA---------QDCF 226
DR + C+NCGE+GHM+ +C + + R K CF CG H R C A + CF
Sbjct: 41 DRPKRGCFNCGEDGHMSRDCPNPKQERSKGCFKCGEEGHMSRDCPTAGEGGDSDRPKGCF 100
Query: 227 ICKKGGHRAKDC 238
C++ GH AKDC
Sbjct: 101 KCQQEGHMAKDC 112
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 64/166 (38%), Gaps = 41/166 (24%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
CF C + GH ++DCP G + + C CG+ GH C N K+ +
Sbjct: 20 CFKCGEEGHMSRDCPSAGGDGDRPKRGCFNCGEDGHMSRDCPNP------KQER------ 67
Query: 285 FGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEAS-PSSCYNCGA 343
CF+CG+ GH M + GE ++ P C+ C
Sbjct: 68 ---------------SKGCFKCGEEGH--------MSRDCPTAGEGGDSDRPKGCFKCQQ 104
Query: 344 EGHFARECVSSSKVRK----RNIDAS-TPTFRPHRENKDHSGIKSA 384
EGH A++C + + R + ++A P P E+ GI +
Sbjct: 105 EGHMAKDCTNEAVPRMGPDGKPMEAPYVPPSMPTDESSIFEGISTG 150
>gi|171694395|ref|XP_001912122.1| hypothetical protein [Podospora anserina S mat+]
gi|170947146|emb|CAP73951.1| unnamed protein product [Podospora anserina S mat+]
Length = 479
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 57/137 (41%), Gaps = 18/137 (13%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ-----DCFICKKGGHRAKD 237
CYNC E GH +C + K C CG H V +C + + +C C + GH +KD
Sbjct: 304 CYNCDEVGHRVRDCPTPRVDKFACKNCGQPGHPVAECPEPRSAEGVECRKCNETGHFSKD 363
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISD 295
CP G C CG GH C ++D+ VQC C GH C D
Sbjct: 364 CPSAGPRG------CRNCGQEGHMSKECTEPKNMDN---VQCRNCDEMGHFSKECPKPPD 414
Query: 296 AVPGEVSCFRCGQLGHT 312
V C C Q GHT
Sbjct: 415 W--SRVECQNCHQKGHT 429
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 64/175 (36%), Gaps = 40/175 (22%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDC 238
G C NC + GH++ +C+ + + V C+ C + GHR +DC
Sbjct: 273 GLPKCRNCDQLGHISKHCKEDKRENERIQV---------------KCYNCDEVGHRVRDC 317
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVP 298
P F C CG GH + C S + V+C C GH S P
Sbjct: 318 PTPRVDKF----ACKNCGQPGHPVAECPEPRSAEG---VECRKCNETGHF-----SKDCP 365
Query: 299 --GEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
G C CGQ GH ++ E C NC GHF++EC
Sbjct: 366 SAGPRGCRNCGQEGHM-----------SKECTEPKNMDNVQCRNCDEMGHFSKEC 409
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
Query: 187 GEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDCPDKHKS 244
GE GH +C + K C CG H + C A C C H K+CPD
Sbjct: 68 GETGHNKADCSNPRKPLGACRRCGDEGHYSKDCPTAGPMTCNACGSTEHLRKECPDA--- 124
Query: 245 GFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
+C CG+ GH + +C N+ +D
Sbjct: 125 ---GPMLCKNCGEEGHTISACENARKVD 149
>gi|67423403|dbj|BAD99522.1| VASA RNA helicase [Daphnia magna]
Length = 775
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 62/145 (42%), Gaps = 12/145 (8%)
Query: 179 GWQTCYNCGEEGHMAVNC---RSAVKRKKPCFVCGSLEHGVRQCSKA--------QDCFI 227
G + C+ CGEEGHMA C + C CG H R+C +A + C
Sbjct: 137 GGRPCHKCGEEGHMARECPKGGGGGGGSRACHKCGEEGHFSRECPQAGGGGGSGPRTCHK 196
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGH 287
C + GH +++CP + G ++ C KCG+ GH C C+ C GH
Sbjct: 197 CGEEGHFSRECP-QGGGGGGGSRACHKCGEEGHFSRECPQGGGGGGSGPRTCHKCGEEGH 255
Query: 288 LCCVNISDAVPGEVSCFRCGQLGHT 312
+ G+ CF+C + GHT
Sbjct: 256 VSRDCPQGGGGGDSKCFKCHEAGHT 280
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 59/140 (42%), Gaps = 11/140 (7%)
Query: 214 HGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDD 273
+G++ + C C + GH A++CP K G ++ C KCG+ GH C +
Sbjct: 130 NGLKSTGGGRPCHKCGEEGHMARECP-KGGGGGGGSRACHKCGEEGHFSRECPQAGGGGG 188
Query: 274 LKEVQCYICRCFGHLC--CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETV 331
C+ C GH C G +C +CG+ GH C Q
Sbjct: 189 SGPRTCHKCGEEGHFSRECPQGGGGGGGSRACHKCGEEGHFS---RECPQGGGGG----- 240
Query: 332 EASPSSCYNCGAEGHFAREC 351
+ P +C+ CG EGH +R+C
Sbjct: 241 GSGPRTCHKCGEEGHVSRDC 260
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 16/114 (14%)
Query: 181 QTCYNCGEEGHMAVNC---RSAVKRKKPCFVCGSLEHGVRQCSKA--------QDCFICK 229
+TC+ CGEEGH + C + C CG H R+C + + C C
Sbjct: 192 RTCHKCGEEGHFSRECPQGGGGGGGSRACHKCGEEGHFSRECPQGGGGGGSGPRTCHKCG 251
Query: 230 KGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYS--LDDLKEVQCYI 281
+ GH ++DCP + G C KC ++GH C N +S +D K + YI
Sbjct: 252 EEGHVSRDCP---QGGGGGDSKCFKCHEAGHTSKDCPNPFSELTEDGKPREQYI 302
>gi|26452133|dbj|BAC43155.1| unknown protein [Arabidopsis thaliana]
Length = 268
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 14/117 (11%)
Query: 206 CFVCGSLEHGVRQCSKAQD------CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSG 259
CF+C S H + C + + C C++ GH K+CP+K+ + ++C CGD+G
Sbjct: 76 CFICHSKTHIAKLCPEKSEWERNKICLQCRRRGHSLKNCPEKNNESSER-KLCYNCGDTG 134
Query: 260 HDMFSCRNSYSLDD--LKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
H + C Y ++D K C+IC+ GH+ C N P C CG + H
Sbjct: 135 HSLSHC--PYPMEDGGTKFASCFICKGQGHISKNCPENKHGIYPMGGCCKVCGSVAH 189
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 11/101 (10%)
Query: 181 QTCYNCGEEGHMAVNC---RSAVKRKKPCFVCGSLEHGVRQC--------SKAQDCFICK 229
+ C C GH NC + +K C+ CG H + C +K CFICK
Sbjct: 99 KICLQCRRRGHSLKNCPEKNNESSERKLCYNCGDTGHSLSHCPYPMEDGGTKFASCFICK 158
Query: 230 KGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYS 270
GH +K+CP+ + C CG H + C + ++
Sbjct: 159 GQGHISKNCPENKHGIYPMGGCCKVCGSVAHLVKDCPDKFN 199
>gi|15237136|ref|NP_200051.1| vascular-related NAC-domain 6 protein [Arabidopsis thaliana]
gi|10177404|dbj|BAB10535.1| unnamed protein product [Arabidopsis thaliana]
gi|90962970|gb|ABE02409.1| At5g52380 [Arabidopsis thaliana]
gi|332008824|gb|AED96207.1| vascular-related NAC-domain 6 protein [Arabidopsis thaliana]
Length = 268
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 14/117 (11%)
Query: 206 CFVCGSLEHGVRQCSKAQD------CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSG 259
CF+C S H + C + + C C++ GH K+CP+K+ + ++C CGD+G
Sbjct: 76 CFICHSKTHIAKLCPEKSEWERNKICLQCRRRGHSLKNCPEKNNESSEK-KLCYNCGDTG 134
Query: 260 HDMFSCRNSYSLDD--LKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
H + C Y ++D K C+IC+ GH+ C N P C CG + H
Sbjct: 135 HSLSHC--PYPMEDGGTKFASCFICKGQGHISKNCPENKHGIYPMGGCCKVCGSVAH 189
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 11/101 (10%)
Query: 181 QTCYNCGEEGHMAVNC---RSAVKRKKPCFVCGSLEHGVRQC--------SKAQDCFICK 229
+ C C GH NC + KK C+ CG H + C +K CFICK
Sbjct: 99 KICLQCRRRGHSLKNCPEKNNESSEKKLCYNCGDTGHSLSHCPYPMEDGGTKFASCFICK 158
Query: 230 KGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYS 270
GH +K+CP+ + C CG H + C + ++
Sbjct: 159 GQGHISKNCPENKHGIYPMGGCCKVCGSVAHLVKDCPDKFN 199
>gi|308472350|ref|XP_003098403.1| hypothetical protein CRE_06839 [Caenorhabditis remanei]
gi|308269067|gb|EFP13020.1| hypothetical protein CRE_06839 [Caenorhabditis remanei]
Length = 386
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
CF C++ GHR DCP ++ S Q+ VC KCG H + C+ + C++C+
Sbjct: 229 CFHCREPGHRLADCPKRNSS--QSDGVCFKCGSMEHSIHECKKK-GVKGFPYATCFVCKQ 285
Query: 285 FGHL---CCVNISDAVPGEVSCFRCGQLGH 311
GH+ C N + P +C CG +GH
Sbjct: 286 VGHISRDCHQNANGVYPDGGACNVCGAVGH 315
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 182 TCYNCGEEGHMAVNC--RSAVKRKKPCFVCGSLEHGVRQCSKA-------QDCFICKKGG 232
C++C E GH +C R++ + CF CGS+EH + +C K CF+CK+ G
Sbjct: 228 ACFHCREPGHRLADCPKRNSSQSDGVCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVG 287
Query: 233 HRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
H ++DC + + C CG GH C
Sbjct: 288 HISRDCHQNANGVYPDGGACNVCGAVGHLKRDC 320
>gi|361124091|gb|EHK96212.1| putative ATP-dependent RNA helicase glh-4 [Glarea lozoyensis 74030]
Length = 452
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 63/141 (44%), Gaps = 19/141 (13%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ-----DCFICKKGGHRAK 236
+C+NC E GH +C K C C + H ++C++ + +C C + GH AK
Sbjct: 253 SCFNCSEVGHRMRDCPVPRVDKFACRNCKASGHSSKECTEPRSAEGVECKKCNETGHFAK 312
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDA 296
DCP G A C CG+ GH C N K+VQC C FGH V
Sbjct: 313 DCPQGGGGGGGGA--CHNCGEEGHRKQDCTNE------KKVQCRNCDEFGH---VGRDCP 361
Query: 297 VP---GEVSCFRCGQLGHTGL 314
+P V+C C + GHT +
Sbjct: 362 LPRDYSRVTCTNCQKTGHTKV 382
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 62/189 (32%), Gaps = 55/189 (29%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHR 234
P DRG C NC + GH C + K V CF C + GHR
Sbjct: 218 PVDRGVPKCSNCDQLGHTFKGCPEEKQEKTDKIVVS--------------CFNCSEVGHR 263
Query: 235 AKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNIS 294
+DCP F C C SGH C S +
Sbjct: 264 MRDCPVPRVDKF----ACRNCKASGHSSKECTEPRSAEG--------------------- 298
Query: 295 DAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
V C +C + GH C Q +C+NCG EGH ++C +
Sbjct: 299 ------VECKKCNETGHFA---KDCPQG-------GGGGGGGACHNCGEEGHRKQDCTNE 342
Query: 355 SKVRKRNID 363
KV+ RN D
Sbjct: 343 KKVQCRNCD 351
>gi|358388038|gb|EHK25632.1| hypothetical protein TRIVIDRAFT_167877 [Trichoderma virens Gv29-8]
Length = 178
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 66/160 (41%), Gaps = 29/160 (18%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA--------QDC 225
D P +G CYNCG EGH++ +C +K K C+ CG H R C +A +C
Sbjct: 21 DCPTKGPAKCYNCGGEGHISRDCTEPMKDNKSCYKCGQQGHISRDCPQAGGAGSGQSTEC 80
Query: 226 FICKKGGHRAKDCPDKHKSGFQN-------------AQVCLKCGDSGHDMFSCRNSYSLD 272
+ C + GH A+ CP N + C CG GH C N
Sbjct: 81 YKCGEKGHIARSCPKSGGGFGGNSYGGNSGGYGGGAGKTCYSCGGYGHMSRECVNG---- 136
Query: 273 DLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHT 312
++CY C GH ++ GE C++C Q GH
Sbjct: 137 ----MKCYNCGESGHYSRDCPKESAGGEKICYKCQQSGHV 172
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 70/178 (39%), Gaps = 33/178 (18%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA----QDCFICKKGGHRAKD 237
CY+CG GH A +C K C+ CG H R C++ + C+ C + GH ++D
Sbjct: 8 ACYSCGSTGHQARDC--PTKGPAKCYNCGGEGHISRDCTEPMKDNKSCYKCGQQGHISRD 65
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAV 297
CP +G + C KCG+ GH SC S +
Sbjct: 66 CPQAGGAGSGQSTECYKCGEKGHIARSCPKSGGGFGGNSYG-----------GNSGGYGG 114
Query: 298 PGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSS 355
+C+ CG GH SR E V CYNCG GH++R+C S
Sbjct: 115 GAGKTCYSCGGYGHM-------------SR-ECVNG--MKCYNCGESGHYSRDCPKES 156
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 20/102 (19%)
Query: 183 CYNCGEEGHMAVNC-----------------RSAVKRKKPCFVCGSLEHGVRQCSKAQDC 225
CY CGE+GH+A +C K C+ CG H R+C C
Sbjct: 80 CYKCGEKGHIARSCPKSGGGFGGNSYGGNSGGYGGGAGKTCYSCGGYGHMSRECVNGMKC 139
Query: 226 FICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
+ C + GH ++DCP + G ++C KC SGH C N
Sbjct: 140 YNCGESGHYSRDCPKESAGG---EKICYKCQQSGHVQAQCPN 178
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 62/148 (41%), Gaps = 32/148 (21%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
C+ C GH+A+DCP K C CG GH C + D K CY C
Sbjct: 9 CYSCGSTGHQARDCPTK------GPAKCYNCGGEGHISRDCTEP--MKDNKS--CYKCGQ 58
Query: 285 FGHLC--CVNISDAVPGEVS-CFRCGQLGHTGLHWNSCMQACARSRGETVEA-------- 333
GH+ C A G+ + C++CG+ GH ++C +S G
Sbjct: 59 QGHISRDCPQAGGAGSGQSTECYKCGEKGHI-------ARSCPKSGGGFGGNSYGGNSGG 111
Query: 334 ----SPSSCYNCGAEGHFARECVSSSKV 357
+ +CY+CG GH +RECV+ K
Sbjct: 112 YGGGAGKTCYSCGGYGHMSRECVNGMKC 139
>gi|322705172|gb|EFY96760.1| zinc knuckle domain containing protein [Metarhizium anisopliae
ARSEF 23]
Length = 223
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 73/199 (36%), Gaps = 42/199 (21%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
+ CY CG GH A C S+ ++ C+ C H C ++A+ C+ C+ GH
Sbjct: 7 RACYKCGNVGHYAEVCSSS---ERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQ 63
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY-----------------------SLD 272
DCP SG + C CG GH +C N
Sbjct: 64 ADCPTLRLSGSATSGRCYNCGQPGHLARACPNPVGPMGRGAPMGRGGFAGGFAGRGGFSG 123
Query: 273 DLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVE 332
+ CY C H D + C+ CG+LGH + C G +
Sbjct: 124 GPRPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHIS-------RDCTAPNGGPLN 172
Query: 333 ASPSSCYNCGAEGHFAREC 351
+ +CY CG GH +R+C
Sbjct: 173 TAGKTCYQCGEAGHISRDC 191
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 12/73 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK---------AQDCFICKKGG 232
TCY CG H A +C++ + C+ CG L H R C+ + C+ C + G
Sbjct: 129 TCYKCGGPNHFARDCQAQAMK---CYACGKLGHISRDCTAPNGGPLNTAGKTCYQCGEAG 185
Query: 233 HRAKDCPDKHKSG 245
H ++DCP K+ SG
Sbjct: 186 HISRDCPQKNASG 198
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 62/151 (41%), Gaps = 15/151 (9%)
Query: 203 KKPCFVCGSLEHGVRQCSKAQD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHD 261
++ C+ CG++ H CS ++ C+ CK+ GH + CP + A+ C C GH
Sbjct: 6 RRACYKCGNVGHYAEVCSSSERLCYNCKQPGHESNGCPLPRTT---EAKQCYHCQGLGHV 62
Query: 262 MFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTG-LHWNSCM 320
C +CY C GHL + A P V G +G +
Sbjct: 63 QADCPTLRLSGSATSGRCYNCGQPGHL-----ARACPNPV-----GPMGRGAPMGRGGFA 112
Query: 321 QACARSRGETVEASPSSCYNCGAEGHFAREC 351
A G + P++CY CG HFAR+C
Sbjct: 113 GGFAGRGGFSGGPRPATCYKCGGPNHFARDC 143
>gi|241780604|ref|XP_002400201.1| E3 ubiquitin ligase, putative [Ixodes scapularis]
gi|215510686|gb|EEC20139.1| E3 ubiquitin ligase, putative [Ixodes scapularis]
Length = 181
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 84/206 (40%), Gaps = 58/206 (28%)
Query: 173 FDPPDRGWQTCYNCGEEGHMAVNCRSAVKR-------------------KKPCFVCGSLE 213
+ P R + CY C GH A +C+ A R + C+ CG +
Sbjct: 3 YKAPIR--EKCYKCNRIGHFARDCKEAEDRCYRCNGTGHISKDCQHGPDEMSCYNCGKMG 60
Query: 214 HGVRQCSKAQ-DCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
H R+C + + C+IC K GH ++DC Q+ + C CG GH C +S D
Sbjct: 61 HIARECKEQEKTCYICHKQGHISRDCE-------QDERRCYLCGKLGHISRDCPSS-ERD 112
Query: 273 DLKEVQCYICRCFGHLCCVNISDAVPGEVS-------CFRCGQLGHTGLHWNSCMQACAR 325
D K CY C GHL +IS P C+RC + GH + S
Sbjct: 113 DRK---CYNC---GHL--GHISRDCPEAGGNDTVADVCYRCNERGHIARNCRS------- 157
Query: 326 SRGETVEASPSSCYNCGAEGHFAREC 351
+ + CY+CG GH AREC
Sbjct: 158 ------TRTNNRCYHCGEVGHLAREC 177
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 14/110 (12%)
Query: 252 CLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGH 311
C KC GH C+ + E +CY C GH+ P E+SC+ CG++GH
Sbjct: 11 CYKCNRIGHFARDCKEA-------EDRCYRCNGTGHI--SKDCQHGPDEMSCYNCGKMGH 61
Query: 312 TGLHWNSCMQAC--ARSRGET---VEASPSSCYNCGAEGHFARECVSSSK 356
+ C +G E CY CG GH +R+C SS +
Sbjct: 62 IARECKEQEKTCYICHKQGHISRDCEQDERRCYLCGKLGHISRDCPSSER 111
>gi|50550507|ref|XP_502726.1| YALI0D12056p [Yarrowia lipolytica]
gi|49648594|emb|CAG80914.1| YALI0D12056p [Yarrowia lipolytica CLIB122]
Length = 197
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 82/205 (40%), Gaps = 53/205 (25%)
Query: 178 RGW-QTCYNCGEEGHMAVNCRSAVKRKKP-CFVCGSLEHGVRQCS---KAQDCFICKKGG 232
RG+ +TC+NCGE GH R+ + P C+ CG+ H R C+ K + CF C + G
Sbjct: 9 RGYSRTCFNCGEFGHQV---RACPRVGNPVCYNCGNDGHMSRDCTEEPKEKACFKCNQPG 65
Query: 233 HRAKDCP-------DKHKSGFQNAQ---------------VCLKCGDSGHDMFSCRNSYS 270
H K+CP D N + VC KCG GH +CR+ +
Sbjct: 66 HILKECPQNDAIVHDGAAPVAPNGEAPIGGEFGAPRGPSGVCYKCGKPGHFARACRSVPA 125
Query: 271 LDDLKEV----QCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARS 326
+ CY C GHL D G+ C+ CG +GH
Sbjct: 126 GGAPPKFGRTQSCYSCGGQGHL----SKDCTVGQ-KCYNCGSMGHVSK------------ 168
Query: 327 RGETVEASPSSCYNCGAEGHFAREC 351
E EA CYNC GH A +C
Sbjct: 169 --ECGEAQSRVCYNCKKPGHIAIKC 191
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 42/101 (41%), Gaps = 14/101 (13%)
Query: 173 FDPPDRGWQTCYNCGEEGHMAVNCRSA--------VKRKKPCFVCGSLEHGVRQCSKAQD 224
F P CY CG+ GH A CRS R + C+ CG H + C+ Q
Sbjct: 97 FGAPRGPSGVCYKCGKPGHFARACRSVPAGGAPPKFGRTQSCYSCGGQGHLSKDCTVGQK 156
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
C+ C GH +K+C G ++VC C GH C
Sbjct: 157 CYNCGSMGHVSKEC------GEAQSRVCYNCKKPGHIAIKC 191
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 145 ADNGDEGVTTVEISDNIVLRKLLRGPRYFDPPDRG-WQTCYNCGEEGHMAVNCRSAVKRK 203
A G GV R P PP G Q+CY+CG +GH++ +C K
Sbjct: 99 APRGPSGVCYKCGKPGHFARACRSVPAGGAPPKFGRTQSCYSCGGQGHLSKDCTVGQK-- 156
Query: 204 KPCFVCGSLEHGVRQCSKAQD--CFICKKGGHRAKDC 238
C+ CGS+ H ++C +AQ C+ CKK GH A C
Sbjct: 157 --CYNCGSMGHVSKECGEAQSRVCYNCKKPGHIAIKC 191
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 55/152 (36%), Gaps = 48/152 (31%)
Query: 206 CFVCGSLEHGVRQCSKAQD--CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMF 263
CF CG H VR C + + C+ C GH ++DC ++ K + C KC GH +
Sbjct: 15 CFNCGEFGHQVRACPRVGNPVCYNCGNDGHMSRDCTEEPKE-----KACFKCNQPGHILK 69
Query: 264 SCRNSYSL--DDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQ 321
C + ++ D V N + GE R G +G+
Sbjct: 70 ECPQNDAIVHDGAAPVA------------PNGEAPIGGEFGAPR----GPSGV------- 106
Query: 322 ACARSRGETVEASPSSCYNCGAEGHFARECVS 353
CY CG GHFAR C S
Sbjct: 107 ----------------CYKCGKPGHFARACRS 122
>gi|116201047|ref|XP_001226335.1| hypothetical protein CHGG_08408 [Chaetomium globosum CBS 148.51]
gi|88176926|gb|EAQ84394.1| hypothetical protein CHGG_08408 [Chaetomium globosum CBS 148.51]
Length = 222
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 74/201 (36%), Gaps = 40/201 (19%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
+ CY CGE GH A C S + C+ C H +C +KA+ C+ C+ GH
Sbjct: 7 RACYKCGELGHHAEACASPHRL---CYNCKQPNHESNECPMPRTTKAKQCYHCQGLGHVQ 63
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYS---------------------LDDL 274
+CP SG C C GH +C N +
Sbjct: 64 AECPTLRLSGAGAGNRCYNCDSIGHLARNCPNPPVPGAGRGGMVPRGGFAPVRGGFVGGP 123
Query: 275 KEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEAS 334
+ CY C H D + C+ CG+LGH + C G + +
Sbjct: 124 RPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI-------SRDCTAPNGGPLNTA 172
Query: 335 PSSCYNCGAEGHFARECVSSS 355
+CY CG GH +R+C + +
Sbjct: 173 GKTCYQCGEAGHISRDCANKA 193
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 64/156 (41%), Gaps = 18/156 (11%)
Query: 198 SAVKRKKPCFVCGSLEHGVRQC-SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCG 256
S+V R+ C+ CG L H C S + C+ CK+ H + +CP + A+ C C
Sbjct: 2 SSVSRRA-CYKCGELGHHAEACASPHRLCYNCKQPNHESNECPMPRTT---KAKQCYHCQ 57
Query: 257 DSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHW 316
GH C +CY C GHL + VPG R G + G
Sbjct: 58 GLGHVQAECPTLRLSGAGAGNRCYNCDSIGHLARNCPNPPVPGA---GRGGMVPRGGF-- 112
Query: 317 NSCMQACARSRGETVEAS-PSSCYNCGAEGHFAREC 351
A RG V P++CY CG HFAR+C
Sbjct: 113 -------APVRGGFVGGPRPATCYKCGGPNHFARDC 141
>gi|85099515|ref|XP_960800.1| hypothetical protein NCU08933 [Neurospora crassa OR74A]
gi|28922325|gb|EAA31564.1| predicted protein [Neurospora crassa OR74A]
gi|28950135|emb|CAD70993.1| conserved hypothetical protein [Neurospora crassa]
Length = 449
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 65/177 (36%), Gaps = 41/177 (23%)
Query: 178 RGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKD 237
RG C NCGE GH+ +C E G + CF C++ GHR +D
Sbjct: 234 RGIPKCGNCGELGHIRKSCP---------------EEGAEKEELVIKCFNCEEVGHRIRD 278
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAV 297
CP F C CG SGH C S + V+C C GH S
Sbjct: 279 CPIPRVDKF----ACKNCGQSGHRASDCTEPRSAEG---VECRKCNEMGHF-----SKDC 326
Query: 298 P---GEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
P G C CGQ GH A+ E C NC GHF++EC
Sbjct: 327 PQGGGPRGCRNCGQEGHM-----------AKECTEPKNMDNVQCRNCDEFGHFSKEC 372
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 56/136 (41%), Gaps = 17/136 (12%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ-----DCFICKKGGHRAKD 237
C+NC E GH +C K C CG H C++ + +C C + GH +KD
Sbjct: 266 CFNCEEVGHRIRDCPIPRVDKFACKNCGQSGHRASDCTEPRSAEGVECRKCNEMGHFSKD 325
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISD 295
CP + C CG GH C ++D+ VQC C FGH C D
Sbjct: 326 CPQG-----GGPRGCRNCGQEGHMAKECTEPKNMDN---VQCRNCDEFGHFSKECPKPRD 377
Query: 296 AVPGEVSCFRCGQLGH 311
V C C Q+GH
Sbjct: 378 IT--RVKCSNCQQMGH 391
>gi|406863952|gb|EKD16998.1| zinc knuckle protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 545
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 14/97 (14%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ-------DCFICKKGGHRA 235
C+NCG+EGHM +C K + CF CG H C C +C++ GHRA
Sbjct: 136 CFNCGQEGHMKSDCPQPPKSRG-CFNCGEEGHSKADCPNPAVAREFTGTCRVCEQQGHRA 194
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
DCP K + VC C + GH++ C +D
Sbjct: 195 ADCPSKPPT------VCKNCQEEGHEVVVCDKPRKID 225
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ-----DCFICKKGGHRAKD 237
CYNC E GH +C + K C C H ++CS+ + +C C + GH +++
Sbjct: 380 CYNCEETGHRIRDCPNPRPDKFACRNCKQSGHSSKECSEPRSAEGVECKKCNEVGHFSRE 439
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAV 297
CP + G ++ C CG GH C N L C C GH C +
Sbjct: 440 CP---QGGGGGSRACHNCGQEGHSKNDCTNERVL------ICRNCDAQGHECSKPRDYS- 489
Query: 298 PGEVSCFRCGQLGHT 312
V C C Q+GHT
Sbjct: 490 --RVKCSNCDQMGHT 502
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 66/183 (36%), Gaps = 36/183 (19%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
Q C NC GH NC K EH V +C + C++ GHR +DCP+
Sbjct: 351 QKCGNCDGLGHTQRNCPQDKVEK---------EHTVVKC------YNCEETGHRIRDCPN 395
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGE 300
F C C SGH C S + V+C C GH G
Sbjct: 396 PRPDKF----ACRNCKQSGHSSKECSEPRSAEG---VECKKCNEVGHFSRECPQGGGGGS 448
Query: 301 VSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVRKR 360
+C CGQ GH S+ + C NC A+GH + S+V+
Sbjct: 449 RACHNCGQEGH--------------SKNDCTNERVLICRNCDAQGHECSKPRDYSRVKCS 494
Query: 361 NID 363
N D
Sbjct: 495 NCD 497
>gi|291225537|ref|XP_002732758.1| PREDICTED: zinc finger, CCHC domain containing 9-like [Saccoglossus
kowalevskii]
Length = 245
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 14/108 (12%)
Query: 178 RGWQTCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD--------- 224
R + C++C + GH +C +K CF CGS EH QC+ D
Sbjct: 90 RNKKVCFHCRQPGHGVADCPVILKANDQGMGICFKCGSTEHTSHQCTARVDKKRGEYPFA 149
Query: 225 -CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSL 271
CF+C K GH ++ CPD K + C CG H + C ++ SL
Sbjct: 150 RCFVCHKIGHLSRQCPDNPKGLYPYGGGCTICGSVKHFVKDCPDNISL 197
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC--RNSYSLDDLKEVQCYIC 282
CF C++ GH DCP K+ Q +C KCG + H C R + +C++C
Sbjct: 95 CFHCRQPGHGVADCPVILKANDQGMGICFKCGSTEHTSHQCTARVDKKRGEYPFARCFVC 154
Query: 283 RCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
GHL C N P C CG + H
Sbjct: 155 HKIGHLSRQCPDNPKGLYPYGGGCTICGSVKH 186
>gi|322697703|gb|EFY89480.1| zinc knuckle domain containing protein [Metarhizium acridum CQMa
102]
Length = 223
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 73/199 (36%), Gaps = 42/199 (21%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
+ CY CG GH A C S+ ++ C+ C H C ++A+ C+ C+ GH
Sbjct: 7 RACYKCGNVGHYAEVCSSS---ERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQ 63
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYS-----------------------LD 272
DCP SG + C CG GH +C N
Sbjct: 64 ADCPTLRLSGSATSGRCYNCGQPGHLARACPNPVGPMGRGAPMGRGGFAGGFAGRGGFSG 123
Query: 273 DLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVE 332
+ CY C H D + C+ CG+LGH + C G +
Sbjct: 124 GPRPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHIS-------RDCTAPNGGPLN 172
Query: 333 ASPSSCYNCGAEGHFAREC 351
+ +CY CG GH +R+C
Sbjct: 173 TAGKTCYQCGEAGHISRDC 191
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 12/73 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK---------AQDCFICKKGG 232
TCY CG H A +C++ + C+ CG L H R C+ + C+ C + G
Sbjct: 129 TCYKCGGPNHFARDCQAQAMK---CYACGKLGHISRDCTAPNGGPLNTAGKTCYQCGEAG 185
Query: 233 HRAKDCPDKHKSG 245
H ++DCP K+ SG
Sbjct: 186 HISRDCPQKNASG 198
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 62/151 (41%), Gaps = 15/151 (9%)
Query: 203 KKPCFVCGSLEHGVRQCSKAQD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHD 261
++ C+ CG++ H CS ++ C+ CK+ GH + CP + A+ C C GH
Sbjct: 6 RRACYKCGNVGHYAEVCSSSERLCYNCKQPGHESNGCPLPRTT---EAKQCYHCQGLGHV 62
Query: 262 MFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTG-LHWNSCM 320
C +CY C GHL + A P V G +G +
Sbjct: 63 QADCPTLRLSGSATSGRCYNCGQPGHL-----ARACPNPV-----GPMGRGAPMGRGGFA 112
Query: 321 QACARSRGETVEASPSSCYNCGAEGHFAREC 351
A G + P++CY CG HFAR+C
Sbjct: 113 GGFAGRGGFSGGPRPATCYKCGGPNHFARDC 143
>gi|68482666|ref|XP_714730.1| hypothetical protein CaO19.10692 [Candida albicans SC5314]
gi|68482937|ref|XP_714599.1| hypothetical protein CaO19.3182 [Candida albicans SC5314]
gi|46436181|gb|EAK95548.1| hypothetical protein CaO19.3182 [Candida albicans SC5314]
gi|46436321|gb|EAK95685.1| hypothetical protein CaO19.10692 [Candida albicans SC5314]
gi|238882592|gb|EEQ46230.1| zinc-finger protein GIS2 [Candida albicans WO-1]
Length = 175
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 78/209 (37%), Gaps = 76/209 (36%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
+TCY CGE GH+A +C+ + C+ C K GH + DCPD
Sbjct: 7 RTCYKCGEVGHVADDCQQEERL----------------------CYNCHKPGHESNDCPD 44
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGE 300
++ A+ C CGD GH C N + +CY C FGH+ D+ P
Sbjct: 45 PKQN---TAKQCYSCGDVGHIQTECPN-----QAQGAKCYNCGQFGHI--SKNCDSAPSS 94
Query: 301 ------------------------------------VSCFRCGQLGHTGLHWNSCMQACA 324
V C+ CG++GH + C
Sbjct: 95 TNNAPSFKRPSGRASGTTCYKCGGPNHFARDCQANTVKCYACGKVGHI-------SKDCH 147
Query: 325 RSRGETVEASPSSCYNCGAEGHFARECVS 353
S G + S +CYNCG GH ++EC +
Sbjct: 148 SSAGGS-NFSAKTCYNCGKSGHISKECTA 175
>gi|341875989|gb|EGT31924.1| hypothetical protein CAEBREN_06592 [Caenorhabditis brenneri]
Length = 395
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
CF C++ GHR DCP ++ S + VC KCG H + C+ + C++C+
Sbjct: 235 CFHCREPGHRLADCPKRNSS--HSDGVCFKCGSMEHSIHECKKK-GVKGFPFATCFVCKQ 291
Query: 285 FGHL---CCVNISDAVPGEVSCFRCGQLGH 311
GH+ C N++ P +C CG +GH
Sbjct: 292 VGHISRDCHQNLNGVYPDGGACNVCGAVGH 321
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
Query: 182 TCYNCGEEGHMAVNC--RSAVKRKKPCFVCGSLEHGVRQCSKA-------QDCFICKKGG 232
C++C E GH +C R++ CF CGS+EH + +C K CF+CK+ G
Sbjct: 234 ACFHCREPGHRLADCPKRNSSHSDGVCFKCGSMEHSIHECKKKGVKGFPFATCFVCKQVG 293
Query: 233 HRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
H ++DC + + C CG GH C
Sbjct: 294 HISRDCHQNLNGVYPDGGACNVCGAVGHLKRDC 326
>gi|156065797|ref|XP_001598820.1| hypothetical protein SS1G_00909 [Sclerotinia sclerotiorum 1980]
gi|154691768|gb|EDN91506.1| hypothetical protein SS1G_00909 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 502
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 16/105 (15%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK-------AQDCFICKKGGHR 234
C+NCG+EGH C K +PCF C H +C+ + C IC++ GHR
Sbjct: 72 ACFNCGQEGHSKAECPEPPK-ARPCFNCSEEGHTKAECTNPAVPREFSGTCRICEQQGHR 130
Query: 235 AKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD--DLKEV 277
A DCP ++C C + GH + C+N ++ D+++V
Sbjct: 131 ASDCPSAP------PKLCNNCKEEGHSILECKNPRKIERNDVEDV 169
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 64/178 (35%), Gaps = 36/178 (20%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
+P DRG C C E GH++ +C V + V CF C + GH
Sbjct: 281 EPVDRGVPLCSRCSELGHISKHCTQEVGESERVQV---------------QCFNCSEIGH 325
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNI 293
R +DCP + F C C SGH C S + V+C C GH
Sbjct: 326 RVRDCPIPREDKF----ACRNCKKSGHSSKDCTGPRSAEG---VECKKCNEIGHFSRDCP 378
Query: 294 SDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
+ C C Q GH H C E V C NC AEGH +EC
Sbjct: 379 TGGGGDGGVCRNCNQPGH---HSKECTN-------ERV----IICRNCDAEGHTGKEC 422
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 53/137 (38%), Gaps = 18/137 (13%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCS-----KAQDCFICKKGGHRAKD 237
C+NC E GH +C + K C C H + C+ + +C C + GH ++D
Sbjct: 317 CFNCSEIGHRVRDCPIPREDKFACRNCKKSGHSSKDCTGPRSAEGVECKKCNEIGHFSRD 376
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISD 295
CP + VC C GH C N + + C C GH C D
Sbjct: 377 CPTGGGG---DGGVCRNCNQPGHHSKECTNE------RVIICRNCDAEGHTGKECPKPRD 427
Query: 296 AVPGEVSCFRCGQLGHT 312
V C C Q+GHT
Sbjct: 428 Y--SRVQCQNCKQMGHT 442
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 48/141 (34%), Gaps = 48/141 (34%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
CF C + GH +CP+ K A+ C C + GH C N
Sbjct: 73 CFNCGQEGHSKAECPEPPK-----ARPCFNCSEEGHTKAECTNP---------------- 111
Query: 285 FGHLCCVNISDAVPGEVS--CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCG 342
AVP E S C C Q GH + A P C NC
Sbjct: 112 -----------AVPREFSGTCRICEQQGHRA--------------SDCPSAPPKLCNNCK 146
Query: 343 AEGHFARECVSSSKVRKRNID 363
EGH EC + K+ + +++
Sbjct: 147 EEGHSILECKNPRKIERNDVE 167
>gi|346716306|ref|NP_001231149.1| zinc finger CCHC domain-containing protein 9 [Sus scrofa]
Length = 270
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 71/173 (41%), Gaps = 29/173 (16%)
Query: 129 EDQSVIVRKEEQKVETADNGDEGVTTVEISDNIVL----------RKLLRGPRYFDPPDR 178
ED + + Q + NG+E + E+ I L R+L R +
Sbjct: 70 EDVNGFMEYLRQNSQMVHNGEEIADSQEVRQEIALALKKDSRREGRRLKR-----QAAKK 124
Query: 179 GWQTCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD---------- 224
C++C + GH +C +A++ ++ C+ CGS EH + +C D
Sbjct: 125 NAMVCFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEIIKCKAQVDPALGEFPFAK 184
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
CF+C + GH ++ CPD K + + C CG H C S + D + V
Sbjct: 185 CFVCGEMGHLSRSCPDNPKGLYADGGCCRLCGSVEHFKKDCPESKNSDQMVTV 237
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C++ GH DCP ++ +C +CG + H++ C+ +L
Sbjct: 119 RQAAKKNAMVCFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEIIKCKAQVDPALG 178
Query: 273 DLKEVQCYICRCFGHL--CCVNISDAVPGEVSCFR-CGQLGH 311
+ +C++C GHL C + + + C R CG + H
Sbjct: 179 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGCCRLCGSVEH 220
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 48/119 (40%), Gaps = 13/119 (10%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGH--LCCVNISDAVP 298
K ++ +NA VC C GH + C + ++ CY C H + C D
Sbjct: 118 KRQAAKKNAMVCFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEIIKCKAQVDPAL 177
Query: 299 GEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
GE CF CG++GH SC + + A C CG+ HF ++C S
Sbjct: 178 GEFPFAKCFVCGEMGHLS---RSC-----PDNPKGLYADGGCCRLCGSVEHFKKDCPES 228
>gi|393245308|gb|EJD52819.1| hypothetical protein AURDEDRAFT_181338 [Auricularia delicata
TFB-10046 SS5]
Length = 256
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQ-------VCLKCGDSGHDMFSCRNSYSLDD-LKE 276
CF C+ GH AKDCPD + S + + +C +CG + H + CR + DD L
Sbjct: 82 CFACRGKGHAAKDCPDAN-SNLEGEEKPKPAMGICYRCGATNHSLKRCRRPENPDDPLPF 140
Query: 277 VQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGHTG 313
C++C GHL C N P SC CG+ H
Sbjct: 141 ATCFVCGRKGHLAGGCAKNARGVYPDGGSCVLCGKTTHLA 180
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 19/103 (18%)
Query: 182 TCYNCGEEGHMAVNCRSA------VKRKKP----CFVCGSLEHGVRQCSKAQD------- 224
C+ C +GH A +C A ++ KP C+ CG+ H +++C + ++
Sbjct: 81 VCFACRGKGHAAKDCPDANSNLEGEEKPKPAMGICYRCGATNHSLKRCRRPENPDDPLPF 140
Query: 225 --CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
CF+C + GH A C + + + C+ CG + H C
Sbjct: 141 ATCFVCGRKGHLAGGCAKNARGVYPDGGSCVLCGKTTHLARDC 183
>gi|71416083|ref|XP_810085.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
cruzi strain CL Brener]
gi|51340810|gb|AAU01009.1| nucleic acid binding protein [Trypanosoma cruzi]
gi|70874566|gb|EAN88234.1| universal minicircle sequence binding protein (UMSBP) [Trypanosoma
cruzi]
Length = 134
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 37/146 (25%)
Query: 178 RGWQTCYNCGEEGHMAVNCRS---AVKRKKPCFVCGSLEHGVRQCSKA-------QDCFI 227
RG + CYNCG+ GH++ C + + C+ CG + H R+C + C+
Sbjct: 8 RGSRACYNCGQPGHLSRECPTRPPGAMGDRACYNCGRMGHLSRECPTRPPGAMGDRACYN 67
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGH 287
C + GH +++CP++ GF+ + CY C+ GH
Sbjct: 68 CGRMGHLSRECPNRPAGGFRG-------------------------VARGACYHCQQEGH 102
Query: 288 LCCVNISDAVP-GEVSCFRCGQLGHT 312
L + +A P GE +C+ CGQ GHT
Sbjct: 103 L-ARDCPNAPPGGERACYNCGQTGHT 127
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 16/100 (16%)
Query: 179 GWQTCYNCGEEGHMAVNCRS---AVKRKKPCFVCGSLEHGVRQCSKAQ----------DC 225
G + CYNCG GH++ C + + C+ CG + H R+C C
Sbjct: 35 GDRACYNCGRMGHLSRECPTRPPGAMGDRACYNCGRMGHLSRECPNRPAGGFRGVARGAC 94
Query: 226 FICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
+ C++ GH A+DCP+ G + C CG +GH +C
Sbjct: 95 YHCQQEGHLARDCPNAPPGG---ERACYNCGQTGHTSRAC 131
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 9/116 (7%)
Query: 247 QNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVPGEVSCF 304
+ ++ C CG GH C + + + CY C GHL C G+ +C+
Sbjct: 8 RGSRACYNCGQPGHLSREC-PTRPPGAMGDRACYNCGRMGHLSRECPTRPPGAMGDRACY 66
Query: 305 RCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVRKR 360
CG++GH + R G + +CY+C EGH AR+C ++ +R
Sbjct: 67 NCGRMGHLSRECPN------RPAGGFRGVARGACYHCQQEGHLARDCPNAPPGGER 116
>gi|294463728|gb|ADE77389.1| unknown [Picea sitchensis]
Length = 301
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 206 CFVCGSLEHGVRQCS------KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSG 259
CF+CG+ +H + C + + C +C++ GH K C + ++ + C CG++G
Sbjct: 75 CFICGARDHIAKGCPSKDRWDREKICLLCRERGHTMKHCYNNQQN--HETKYCYNCGETG 132
Query: 260 HDMFSCRNSYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
H + C +C++C+ GHL C N P SC CG L H
Sbjct: 133 HRLSECPEPIQNGGTAFAECFLCKERGHLSKNCPTNTHGIYPKGGSCKICGGLTH 187
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 76/186 (40%), Gaps = 9/186 (4%)
Query: 111 KRIRVRKKKKKEADKIEIEDQSVIVRKEEQKVETADNGDEGVTTVEISDNIVLRKLLRGP 170
KR R+ ++K E+ + K + +++D G V+ S + L + P
Sbjct: 4 KRQRLARQKYLESHGDSVPTLDRDAHKTKTDGDSSDESKNGGGDVKASKRPRPKSLRKHP 63
Query: 171 RYFDPPDRGWQTCYNCGEEGHMAVNCRSAVK--RKKPCFVCGSLEHGVRQCSKAQD---- 224
P + + C+ CG H+A C S + R+K C +C H ++ C Q
Sbjct: 64 LRV-PGSKPGEGCFICGARDHIAKGCPSKDRWDREKICLLCRERGHTMKHCYNNQQNHET 122
Query: 225 --CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYIC 282
C+ C + GHR +CP+ ++G C C + GH +C + K C IC
Sbjct: 123 KYCYNCGETGHRLSECPEPIQNGGTAFAECFLCKERGHLSKNCPTNTHGIYPKGGSCKIC 182
Query: 283 RCFGHL 288
HL
Sbjct: 183 GGLTHL 188
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 60/158 (37%), Gaps = 23/158 (14%)
Query: 197 RSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCG 256
R RK P V GS + CFIC H AK CP K + + ++CL C
Sbjct: 55 RPKSLRKHPLRVPGS--------KPGEGCFICGARDHIAKGCPSKDR--WDREKICLLCR 104
Query: 257 DSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGHTG 313
+ GH M C N+ + K CY C GH C I + CF C + GH
Sbjct: 105 ERGHTMKHCYNNQQNHETK--YCYNCGETGHRLSECPEPIQNGGTAFAECFLCKERGH-- 160
Query: 314 LHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
+ + + SC CG H A++C
Sbjct: 161 ------LSKNCPTNTHGIYPKGGSCKICGGLTHLAKDC 192
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 15/83 (18%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
CYNCGE GH C ++ F +CF+CK+ GH +K+CP
Sbjct: 125 CYNCGETGHRLSECPEPIQNGGTAFA---------------ECFLCKERGHLSKNCPTNT 169
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC 265
+ C CG H C
Sbjct: 170 HGIYPKGGSCKICGGLTHLAKDC 192
>gi|154345724|ref|XP_001568799.1| putative poly-zinc finger protein 2 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066141|emb|CAM43931.1| putative poly-zinc finger protein 2 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 135
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 59/138 (42%), Gaps = 18/138 (13%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
CY CG GH + C SA PCF CG H ++C ++ CF C K GHRA
Sbjct: 1 MVCYRCGGVGHQSRECTSAAD-SAPCFRCGQPGHVAKECLSTISAEEAPCFFCHKAGHRA 59
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL--CCVNI 293
++CP+ +C C GH C N+ CY+C GH+ C
Sbjct: 60 RECPEAPPK--SETVMCYNCSQKGHIASECTNN--------PHCYLCNEDGHVGRSCPAA 109
Query: 294 SDAVPGEVSCFRCGQLGH 311
+ +C +CG+ GH
Sbjct: 110 PKRSAADKTCRKCGKKGH 127
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 63/149 (42%), Gaps = 22/149 (14%)
Query: 206 CFVCGSLEHGVRQCSKAQD---CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDM 262
C+ CG + H R+C+ A D CF C + GH AK+C + C C +GH
Sbjct: 3 CYRCGGVGHQSRECTSAADSAPCFRCGQPGHVAKECLSTISA---EEAPCFFCHKAGHRA 59
Query: 263 FSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQA 322
C + + V CY C GH I+ C+ C + GH G SC A
Sbjct: 60 RECPEAPPKSET--VMCYNCSQKGH-----IASECTNNPHCYLCNEDGHVG---RSCPAA 109
Query: 323 CARSRGETVEASPSSCYNCGAEGHFAREC 351
RS A+ +C CG +GH ++C
Sbjct: 110 PKRS------AADKTCRKCGKKGHLRKDC 132
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 22/102 (21%)
Query: 279 CYICRCFGHLC--CVNISDAVPGEVSCFRCGQLGHTGLHWNS-----------CMQACAR 325
CY C GH C + +D+ P CFRCGQ GH S C +A R
Sbjct: 3 CYRCGGVGHQSRECTSAADSAP----CFRCGQPGHVAKECLSTISAEEAPCFFCHKAGHR 58
Query: 326 SRGETVEASPSS----CYNCGAEGHFARECVSSSKVRKRNID 363
+R E EA P S CYNC +GH A EC ++ N D
Sbjct: 59 AR-ECPEAPPKSETVMCYNCSQKGHIASECTNNPHCYLCNED 99
>gi|2895760|gb|AAC32813.1| universal minicircle sequence binding protein [Crithidia
fasciculata]
gi|2895761|gb|AAC32814.1| universal minicircle sequence binding protein [Crithidia
fasciculata]
Length = 116
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 13/93 (13%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-------SKAQDCFI 227
P +TCYNCG+ GH++ C S ++ K C+ CGS EH R+C + ++ C+
Sbjct: 21 PKAAASRTCYNCGQTGHLSRECPSE-RKPKACYNCGSTEHLSRECPNEAKTGADSRTCYN 79
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
C + GH ++DCP + K + C CG + H
Sbjct: 80 CGQSGHLSRDCPSERK-----PKACYNCGSTEH 107
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCS---KAQDCFICKKGGHRAKDC 238
TCY CGE GHM+ C A + C+ CG H R+C K + C+ C H +++C
Sbjct: 6 TCYKCGEAGHMSRECPKAAASRT-CYNCGQTGHLSRECPSERKPKACYNCGSTEHLSREC 64
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
P++ K+G +++ C CG SGH C + K CY C HL
Sbjct: 65 PNEAKTG-ADSRTCYNCGQSGHLSRDC-----PSERKPKACYNCGSTEHL 108
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 56/134 (41%), Gaps = 25/134 (18%)
Query: 220 SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQC 279
S A C+ C + GH +++CP S + C CG +GH C + K C
Sbjct: 2 SAAVTCYKCGEAGHMSRECPKAAAS-----RTCYNCGQTGHLSREC-----PSERKPKAC 51
Query: 280 YICRCFGHLC--CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSS 337
Y C HL C N + +C+ CGQ GH SR E P +
Sbjct: 52 YNCGSTEHLSRECPNEAKTGADSRTCYNCGQSGHL-------------SRDCPSERKPKA 98
Query: 338 CYNCGAEGHFAREC 351
CYNCG+ H +REC
Sbjct: 99 CYNCGSTEHLSREC 112
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKR---KKPCFVCGSLEHGVRQCS---KAQDCFIC 228
P +R + CYNCG H++ C + K + C+ CG H R C K + C+ C
Sbjct: 43 PSERKPKACYNCGSTEHLSRECPNEAKTGADSRTCYNCGQSGHLSRDCPSERKPKACYNC 102
Query: 229 KKGGHRAKDCPDKH 242
H +++CPD+H
Sbjct: 103 GSTEHLSRECPDRH 116
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 15/81 (18%)
Query: 277 VQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPS 336
V CY C GH+ +C+ CGQ GH SR E P
Sbjct: 5 VTCYKCGEAGHM--SRECPKAAASRTCYNCGQTGHL-------------SRECPSERKPK 49
Query: 337 SCYNCGAEGHFARECVSSSKV 357
+CYNCG+ H +REC + +K
Sbjct: 50 ACYNCGSTEHLSRECPNEAKT 70
>gi|18398546|ref|NP_565427.1| cold shock domain protein 3 [Arabidopsis thaliana]
gi|75165198|sp|Q94C69.1|CSP3_ARATH RecName: Full=Cold shock domain-containing protein 3; Short=AtCSP3
gi|14334920|gb|AAK59638.1| putative glycine-rich, zinc-finger DNA-binding protein [Arabidopsis
thaliana]
gi|17104541|gb|AAL34159.1| putative glycine-rich, zinc-finger DNA-binding protein [Arabidopsis
thaliana]
gi|148726892|dbj|BAF63841.1| cold shock domain protein 3 [Arabidopsis thaliana]
gi|330251603|gb|AEC06697.1| cold shock domain protein 3 [Arabidopsis thaliana]
Length = 301
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 79/212 (37%), Gaps = 49/212 (23%)
Query: 183 CYNCGEEGHMAVNC-------------RSAVKRKKPCFVCGSLEHGVRQCSKA------- 222
C+NCGE GHMA +C + C++CG + H R C ++
Sbjct: 96 CFNCGEVGHMAKDCDGGSGGKSFGGGGGRRSGGEGECYMCGDVGHFARDCRQSGGGNSGG 155
Query: 223 -----QDCFICKKGGHRAKDCPDKHKSGFQNAQV--------CLKCGDSGHDMFSCRNSY 269
+ C+ C + GH AKDC C CG GH CR +
Sbjct: 156 GGGGGRPCYSCGEVGHLAKDCRGGSGGNRYGGGGGRGSGGDGCYMCGGVGHFARDCRQNG 215
Query: 270 SLDDLKEVQ-CYICRCFGHLCCVNISDAVPGEV-----SCFRCGQLGHTGLHWNSCMQAC 323
+ CY C GH+ V S +P +C+ CG GH + C
Sbjct: 216 GGNVGGGGSTCYTCGGVGHIAKVCTSK-IPSGGGGGGRACYECGGTGHL-------ARDC 267
Query: 324 AR--SRGETVEASPSSCYNCGAEGHFARECVS 353
R S + C+ CG EGHFAREC S
Sbjct: 268 DRRGSGSSGGGGGSNKCFICGKEGHFARECTS 299
>gi|242018245|ref|XP_002429589.1| zinc finger protein cchc domain containing protein, putative
[Pediculus humanus corporis]
gi|212514556|gb|EEB16851.1| zinc finger protein cchc domain containing protein, putative
[Pediculus humanus corporis]
Length = 380
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 11/90 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQ-------DCFICKK 230
C++C GH+ C S + + C+ CGS EH +C + +CFICK+
Sbjct: 227 VCFHCRGSGHVLSQCPSLTETENTGTGICYKCGSTEHSAIECKVVKGSSFQFAECFICKE 286
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
GH A+ CPD + + + C +CGD H
Sbjct: 287 QGHIARQCPDNPRGLYPHGGACRECGDVTH 316
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 4/90 (4%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
CF C+ GH CP ++ +C KCG + H C+ + +C+IC+
Sbjct: 228 CFHCRGSGHVLSQCPSLTETENTGTGICYKCGSTEHSAIECK-VVKGSSFQFAECFICKE 286
Query: 285 FGHL---CCVNISDAVPGEVSCFRCGQLGH 311
GH+ C N P +C CG + H
Sbjct: 287 QGHIARQCPDNPRGLYPHGGACRECGDVTH 316
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 12/89 (13%)
Query: 266 RNSYSLDDLKEVQCYICRCFGHLC--CVNISDAV-PGEVSCFRCGQLGHTGLHWNSCMQA 322
R SL LK+ C+ CR GH+ C ++++ G C++CG H+ +
Sbjct: 215 RAEKSLSRLKKSVCFHCRGSGHVLSQCPSLTETENTGTGICYKCGSTEHSAIE------- 267
Query: 323 CARSRGETVEASPSSCYNCGAEGHFAREC 351
C +G + + + C+ C +GH AR+C
Sbjct: 268 CKVVKGSSFQFA--ECFICKEQGHIARQC 294
>gi|326533496|dbj|BAK05279.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1027
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 75/206 (36%), Gaps = 56/206 (27%)
Query: 192 MAVNCRSAVKRKKPCFVCGSLEHGVRQC-SKAQD-------------------------C 225
M S + + C VCGS EH V+ C + A D C
Sbjct: 820 MVPATPSITRYSQNCSVCGSSEHSVQNCPAVAMDMQQPAASGYAASSYGSSPGEAGSGLC 879
Query: 226 FICKKGGHRAKDCPDKHKSGFQ--------NAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
F C + GH +++CP + + ++ N+ +C KC GH C +
Sbjct: 880 FKCNQPGHFSRECPQQEATSYRSPAANANANSGLCFKCNQPGHFSRDCPGQAA------- 932
Query: 278 QCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSS 337
+G VN A C++C Q GH C A S G + A+ +
Sbjct: 933 -----NSYGASAGVNAGAAG----LCYKCNQTGHFA---RDCPGQAANSYGASAGANSGT 980
Query: 338 ---CYNCGAEGHFARECVSSSKVRKR 360
CY C GHFAR+C + +R
Sbjct: 981 AGLCYKCNQPGHFARDCQGQAATPQR 1006
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 45/128 (35%), Gaps = 36/128 (28%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNC--RSAVKRKKP----------CFVCGSLEHGVRQC--- 219
P + G C+ C + GH + C + A + P CF C H R C
Sbjct: 871 PGEAGSGLCFKCNQPGHFSRECPQQEATSYRSPAANANANSGLCFKCNQPGHFSRDCPGQ 930
Query: 220 -------------SKAQDCFICKKGGHRAKDCPDKHKSGF--------QNAQVCLKCGDS 258
A C+ C + GH A+DCP + + + A +C KC
Sbjct: 931 AANSYGASAGVNAGAAGLCYKCNQTGHFARDCPGQAANSYGASAGANSGTAGLCYKCNQP 990
Query: 259 GHDMFSCR 266
GH C+
Sbjct: 991 GHFARDCQ 998
>gi|401420364|ref|XP_003874671.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490907|emb|CBZ26171.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 566
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 60/143 (41%), Gaps = 27/143 (18%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
CY C + GH+ C + C+ CG+ H + C CF C GHR+ +CP +
Sbjct: 128 CYQCHQLGHIMTTCP-----QTRCYNCGTFGHSSQICHSKPHCFHCSHSGHRSSECPMRS 182
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC----------RNSYSLDDLKEVQCYICRCFGHLCCVN 292
K +VC +C + GH+ +C R + + EV C +C GH
Sbjct: 183 K-----GRVCYQCNEPGHEAANCPQGQLCRMCHRPGHFVAHCPEVVCNLCHVKGH----- 232
Query: 293 ISDAVPGEVSCFRCGQLGHTGLH 315
+ V V C CG+ H +H
Sbjct: 233 -TAGVCDNVHCDNCGR-NHETVH 253
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 62/168 (36%), Gaps = 34/168 (20%)
Query: 206 CFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQ--------------- 250
C C + H R C K + C +C + GH +DCP ++ +
Sbjct: 45 CNNCKTRGHLRRNCPKIK-CNLCNRLGHYRRDCPQDASKRVRSVEGAPREEVNLDEEYRW 103
Query: 251 -VCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQL 309
VC CG S H +C Y + ++CY C GH I P + C+ CG
Sbjct: 104 SVCRNCGSSRHIQANCPVRY-----QALECYQCHQLGH-----IMTTCP-QTRCYNCGTF 152
Query: 310 GHTGL------HWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
GH+ H C + RS + + CY C GH A C
Sbjct: 153 GHSSQICHSKPHCFHCSHSGHRSSECPMRSKGRVCYQCNEPGHEAANC 200
>gi|116784713|gb|ABK23446.1| unknown [Picea sitchensis]
Length = 243
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 73/183 (39%), Gaps = 38/183 (20%)
Query: 169 GPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFIC 228
GPR P + C NC GH A C +A C CG H +C K Q C C
Sbjct: 41 GPRSSRP----VELCNNCKRTGHYARECPNASV----CNNCGVSGHIASKCPKEQLCRNC 92
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
KK GH A DC +N VC CG +GH C +++ L K C C GH+
Sbjct: 93 KKPGHLAADC--------RNEPVCNMCGKTGHLAKEC-SAHELGLPKSALCKKCYLPGHI 143
Query: 289 CCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFA 348
++D P + +C C Q GH + C S C CG GH
Sbjct: 144 ----MADC-PNDKACNNCRQTGHLA-------RDCVNS---------PVCNGCGEPGHLV 182
Query: 349 REC 351
R+C
Sbjct: 183 RDC 185
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 71/189 (37%), Gaps = 42/189 (22%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
C NCG GH+A C +++ C C H C C +C K GH AK+C
Sbjct: 69 VCNNCGVSGHIASKC----PKEQLCRNCKKPGHLAADCRNEPVCNMCGKTGHLAKEC-SA 123
Query: 242 HKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEV 301
H+ G + +C KC GH M C N + ++ ++ GHL D V V
Sbjct: 124 HELGLPKSALCKKCYLPGHIMADCPNDKACNNCRQT--------GHL----ARDCVNSPV 171
Query: 302 SCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSS-----------------CYNCGAE 344
C CG+ GH ++ C R + P C CG
Sbjct: 172 -CNGCGEPGHL-------VRDCPRVQSPPRIMPPRGGFGGGFGGGFDDFKIIICRVCGGR 223
Query: 345 GHFARECVS 353
GH + +C S
Sbjct: 224 GHLSVDCPS 232
>gi|440470333|gb|ELQ39408.1| zinc finger protein GIS2 [Magnaporthe oryzae Y34]
Length = 230
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 75/206 (36%), Gaps = 43/206 (20%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
+ CY CG GH A C SA ++ C+ C H C ++A+ C+ C+ GH
Sbjct: 7 RACYKCGNVGHYAEVCSSA---ERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQ 63
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD----------------------- 272
DCP SG + C CG GH +C N +
Sbjct: 64 ADCPTLRLSGAGSNGRCYSCGQPGHLARACPNPNGANMGRGAPVPRGGYDGGYGGRGGFA 123
Query: 273 -DLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETV 331
+ CY C H D + C+ CG+LGH + C G +
Sbjct: 124 GGARPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI-------SRDCTAPNGGPL 172
Query: 332 EASPSSCYNCGAEGHFARECVSSSKV 357
+CY CG GH +R+C + +
Sbjct: 173 NTVGKTCYQCGEAGHISRQCPTKATA 198
>gi|389626373|ref|XP_003710840.1| zinc finger protein GIS2 [Magnaporthe oryzae 70-15]
gi|351650369|gb|EHA58228.1| zinc finger protein GIS2 [Magnaporthe oryzae 70-15]
gi|440480347|gb|ELQ61019.1| zinc finger protein GIS2 [Magnaporthe oryzae P131]
Length = 230
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 75/206 (36%), Gaps = 43/206 (20%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
+ CY CG GH A C SA ++ C+ C H C ++A+ C+ C+ GH
Sbjct: 7 RACYKCGNVGHYAEVCSSA---ERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQ 63
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD----------------------- 272
DCP SG + C CG GH +C N +
Sbjct: 64 ADCPTLRLSGAGSNGRCYSCGQPGHLARACPNPNGANMGRGAPVPRGGYGGGYGGRGGFA 123
Query: 273 -DLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETV 331
+ CY C H D + C+ CG+LGH + C G +
Sbjct: 124 GGARPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI-------SRDCTAPNGGPL 172
Query: 332 EASPSSCYNCGAEGHFARECVSSSKV 357
+CY CG GH +R+C + +
Sbjct: 173 NTVGKTCYQCGEAGHISRQCPTKATA 198
>gi|326483283|gb|EGE07293.1| zinc knuckle domain-containing protein [Trichophyton equinum CBS
127.97]
Length = 210
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 48/109 (44%), Gaps = 26/109 (23%)
Query: 181 QTCYNCGEEGHMAVNC----------------------RSAVKRKKPCFVCGSLEHGVRQ 218
Q CY CG+ GH+A NC R + C+ CG H R
Sbjct: 106 QECYKCGQVGHIARNCSQQGGSGYGGGYGNSGSGSYGSGGYGGRSQTCYSCGGYGHMARD 165
Query: 219 CSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
C++ Q C+ C + GH ++DCP + K +VC KC +GH +C N
Sbjct: 166 CTQGQKCYNCGEVGHVSRDCPTEAK----GERVCYKCKQAGHVQAACPN 210
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 72/181 (39%), Gaps = 53/181 (29%)
Query: 171 RYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA-------- 222
R D P +G TCYNCG +GH++ C K K C+ CG H R+C +
Sbjct: 38 RARDCPKKGTPTCYNCGGQGHVSRECTQPPKEKS-CYRCGMTGHISRECPSSGSGDNNYS 96
Query: 223 ---------QDCFICKKGGHRAKDCPDKHKSGFQN------------------AQVCLKC 255
Q+C+ C + GH A++C + SG+ +Q C C
Sbjct: 97 GGYSGGSGGQECYKCGQVGHIARNCSQQGGSGYGGGYGNSGSGSYGSGGYGGRSQTCYSC 156
Query: 256 GDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVP----GEVSCFRCGQLGH 311
G GH + D + +CY C GH +S P GE C++C Q GH
Sbjct: 157 GGYGH--------MARDCTQGQKCYNCGEVGH-----VSRDCPTEAKGERVCYKCKQAGH 203
Query: 312 T 312
Sbjct: 204 V 204
>gi|322710312|gb|EFZ01887.1| zinc knuckle domain protein [Metarhizium anisopliae ARSEF 23]
Length = 182
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 68/159 (42%), Gaps = 28/159 (17%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC----------SKAQ 223
D P +G CYNCG EGHM+ +C +K K C+ CG H R+C +++
Sbjct: 26 DCPSKGPAKCYNCGGEGHMSRDCSEPMKENKSCYKCGQPGHISRECPLGGAGGAGGAQST 85
Query: 224 DCFICKKGGHRAKDCP----------DKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDD 273
+C+ C + GH A++C G + C CG GH C N
Sbjct: 86 ECYKCGEIGHIARNCSKAGGSYGGSFGGGYGGGGAGKTCYSCGGYGHMSRECVNG----- 140
Query: 274 LKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHT 312
++CY C GH ++ GE C++C Q GH
Sbjct: 141 ---MKCYNCGESGHYSRDCPKESSGGEKICYKCQQAGHV 176
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 17/99 (17%)
Query: 183 CYNCGEEGHMAVNC--------------RSAVKRKKPCFVCGSLEHGVRQCSKAQDCFIC 228
CY CGE GH+A NC K C+ CG H R+C C+ C
Sbjct: 87 CYKCGEIGHIARNCSKAGGSYGGSFGGGYGGGGAGKTCYSCGGYGHMSRECVNGMKCYNC 146
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
+ GH ++DCP + G ++C KC +GH +C N
Sbjct: 147 GESGHYSRDCPKESSGG---EKICYKCQQAGHVQSACPN 182
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 69/176 (39%), Gaps = 38/176 (21%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA----QDCFICKKGGHRAKD 237
CY+CG GH A +C S K C+ CG H R CS+ + C+ C + GH +++
Sbjct: 13 ACYSCGNPGHQARDCPSKGPAK--CYNCGGEGHMSRDCSEPMKENKSCYKCGQPGHISRE 70
Query: 238 CPDKHKSGFQNAQV--CLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISD 295
CP G AQ C KCG+ GH +C +
Sbjct: 71 CPLGGAGGAGGAQSTECYKCGEIGHIARNCSKAGGSYGGSFGG--------------GYG 116
Query: 296 AVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
+C+ CG GH SR E V CYNCG GH++R+C
Sbjct: 117 GGGAGKTCYSCGGYGHM-------------SR-ECVNG--MKCYNCGESGHYSRDC 156
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 61/146 (41%), Gaps = 29/146 (19%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQ-CYICR 283
C+ C GH+A+DCP K C CG GH C + +KE + CY C
Sbjct: 14 CYSCGNPGHQARDCPSK------GPAKCYNCGGEGHMSRDCS-----EPMKENKSCYKCG 62
Query: 284 CFGHLCCVNISDAVP----------GEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEA 333
GH IS P C++CG++GH + + + S G
Sbjct: 63 QPGH-----ISRECPLGGAGGAGGAQSTECYKCGEIGHIARNCSKAGGSYGGSFGGGYGG 117
Query: 334 SPS--SCYNCGAEGHFARECVSSSKV 357
+ +CY+CG GH +RECV+ K
Sbjct: 118 GGAGKTCYSCGGYGHMSRECVNGMKC 143
>gi|322710166|gb|EFZ01741.1| hypothetical protein MAA_02970 [Metarhizium anisopliae ARSEF 23]
Length = 452
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 70/190 (36%), Gaps = 64/190 (33%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAK 236
D G + C+NCGE GH + C KK A C C GHR +
Sbjct: 242 DTGLRKCHNCGELGHSSKFCTQEKVEKKA--------------QPAISCSNCGGEGHRIR 287
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDA 296
DCP+ F C CG SGH C +LD+++
Sbjct: 288 DCPEPRVDKF----ACRNCGKSGHRASDCEEPPNLDNME--------------------- 322
Query: 297 VPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSK 356
C +CG+ GH G C Q +R +C NCG EGH A+EC
Sbjct: 323 ------CRKCGEKGHMG---KDCPQGGSR-----------ACRNCGQEGHMAKEC----- 357
Query: 357 VRKRNIDAST 366
+ RN+D T
Sbjct: 358 DQPRNMDNVT 367
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 44/108 (40%), Gaps = 18/108 (16%)
Query: 177 DRGWQT----CYNCGEEGHMAVNCRSAVKR------KKPCFVCGSLEHGVRQCSKAQD-- 224
D GW C C +EGH NC + CF CG H C +D
Sbjct: 18 DSGWNQPQVKCGACSQEGHEEANCPNQHTEAGNDDANNKCFNCGETGHRAADCPTPRDTA 77
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
C CKK GH +DCPDK VC CG GH +C N+ ++
Sbjct: 78 CRYCKKEGHMIRDCPDKP------PMVCDNCGQEGHMRKNCENARVIN 119
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 54/138 (39%), Gaps = 18/138 (13%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA-----QDCFICKKGGHRAK 236
+C NCG EGH +C K C CG H C + +C C + GH K
Sbjct: 275 SCSNCGGEGHRIRDCPEPRVDKFACRNCGKSGHRASDCEEPPNLDNMECRKCGEKGHMGK 334
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNIS 294
DCP ++ C CG GH C ++D+ V C C GH C
Sbjct: 335 DCPQG------GSRACRNCGQEGHMAKECDQPRNMDN---VTCRNCEKTGHFSRDCPEPK 385
Query: 295 DAVPGEVSCFRCGQLGHT 312
D +V C C + GHT
Sbjct: 386 DW--SKVQCSNCQKFGHT 401
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 12/106 (11%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD-----CFIC 228
+PP+ C CGE+GHM +C R C CG H ++C + ++ C C
Sbjct: 314 EPPNLDNMECRKCGEKGHMGKDCPQGGSRA--CRNCGQEGHMAKECDQPRNMDNVTCRNC 371
Query: 229 KKGGHRAKDCPD-KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDD 273
+K GH ++DCP+ K S Q C C GH C+ DD
Sbjct: 372 EKTGHFSRDCPEPKDWSKVQ----CSNCQKFGHTKVRCKEPLVADD 413
>gi|213137655|gb|ACJ44508.1| gag protein [Human immunodeficiency virus 1]
Length = 261
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 13/120 (10%)
Query: 114 RVRKKKKKEA-DKIEIEDQSVIVRKEEQKV---ETADNGDEGVTTVEISDNIVLRKLLRG 169
R+ K KEA DKIE E + ++ K + + N DE ++ V ++ ++ R +G
Sbjct: 91 RIDVKDTKEALDKIEEEQNKCQQKTQQAKAADGKVSQNYDEAMSQVNNANIMMQRSNFKG 150
Query: 170 PRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICK 229
P+ C+NCG+EGH+A NCR+ RKK C+ CG H ++ C + Q F+ K
Sbjct: 151 PKRI-------VKCFNCGKEGHIAKNCRAP--RKKGCWKCGKEGHQMKDCDERQANFLGK 201
>gi|403169101|ref|XP_003328636.2| hypothetical protein PGTG_10595 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167802|gb|EFP84217.2| hypothetical protein PGTG_10595 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 227
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 66/159 (41%), Gaps = 30/159 (18%)
Query: 206 CFVCGSLEHGVRQC-SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFS 264
CF CG+L H QC ++++ C+ CK+ GH + CP+ G Q C CG GH
Sbjct: 9 CFKCGALGHLAEQCPAESRLCYNCKQSGHESASCPNPRTGGVDGRQ-CFTCGGFGHLAAD 67
Query: 265 CRNSYSLDD-LKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHW----NSC 319
C ++ +L + + V + G C+ CGQ GH N
Sbjct: 68 CPSATTLGNRIAGVGSF------------------GGTKCYTCGQFGHVSRSCNHSGNGV 109
Query: 320 MQACARSR-----GETVEASPSSCYNCGAEGHFARECVS 353
Q +SR + P CY C H+AR+C++
Sbjct: 110 GQGAFQSRIGGYKPRPAPSQPVQCYKCQGMNHYARDCMA 148
>gi|427787097|gb|JAA59000.1| Putative e3 ubiquitin ligase [Rhipicephalus pulchellus]
Length = 554
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 222 AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD-DLKEVQCY 280
A+ CF C++ GHR DCP + + +C KCG + H +C S D + +C+
Sbjct: 407 AKLCFKCRQPGHRVSDCPQMLQDSSEPIGICFKCGSTEHFSSACTVQTSKDNEFPYAKCF 466
Query: 281 ICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
IC+ GHL C N P C CG + H
Sbjct: 467 ICKQQGHLSRKCPRNDKGVYPKGGHCNFCGAIDH 500
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 13/98 (13%)
Query: 181 QTCYNCGEEGHMAVNCRSAVK-RKKP---CFVCGSLEHGVRQCS---------KAQDCFI 227
+ C+ C + GH +C ++ +P CF CGS EH C+ CFI
Sbjct: 408 KLCFKCRQPGHRVSDCPQMLQDSSEPIGICFKCGSTEHFSSACTVQTSKDNEFPYAKCFI 467
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
CK+ GH ++ CP K + C CG H C
Sbjct: 468 CKQQGHLSRKCPRNDKGVYPKGGHCNFCGAIDHFKKEC 505
>gi|123325507|gb|ABM74410.1| vasa protein [Botrylloides violaceus]
Length = 630
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 18/96 (18%)
Query: 183 CYNCGEEGHMAVNC---RSAVKRKKPCFVCGSLEHGVRQC-------SKAQDCFICKKGG 232
C+ CGEEGHM+ +C R K CF CG H R C S+++ CF C + G
Sbjct: 43 CFKCGEEGHMSRDCPSGGGGGSRSKGCFKCGEEGHMSRDCPSGGGGGSRSKGCFKCGEEG 102
Query: 233 HRAKDCPDKHKSGFQ--------NAQVCLKCGDSGH 260
H ++DCP+ KS F + C KCG+ GH
Sbjct: 103 HISRDCPNGQKSDFSRNGAGDCARSTACYKCGEEGH 138
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 56/132 (42%), Gaps = 26/132 (19%)
Query: 220 SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQC 279
S+++ CF C + GH ++DCP G ++ C KCG+ GH S D
Sbjct: 38 SRSKGCFKCGEEGHMSRDCPSGGGGG-SRSKGCFKCGEEGH--------MSRD------- 81
Query: 280 YICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCY 339
C + CF+CG+ GH + ++ G A ++CY
Sbjct: 82 ----------CPSGGGGGSRSKGCFKCGEEGHISRDCPNGQKSDFSRNGAGDCARSTACY 131
Query: 340 NCGAEGHFAREC 351
CG EGHF+REC
Sbjct: 132 KCGEEGHFSREC 143
>gi|260943696|ref|XP_002616146.1| hypothetical protein CLUG_03387 [Clavispora lusitaniae ATCC 42720]
gi|238849795|gb|EEQ39259.1| hypothetical protein CLUG_03387 [Clavispora lusitaniae ATCC 42720]
Length = 171
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 78/188 (41%), Gaps = 39/188 (20%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
++CY CGE GH+A NC+ ++++ C+ C H C ++++ C++C GH
Sbjct: 4 RSCYKCGESGHIADNCQ---QQERLCYNCRQAGHESSACPEPKTAESKQCYLCGDIGHIR 60
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSC-----------RNSYSLDDLKEVQCYICRC 284
DCP+ C C + GH C + S K CY C
Sbjct: 61 GDCPNS-----AQGSKCYNCSEFGHISRECPKNEGAAPAAPAHKKSGKFTKSPTCYKCGG 115
Query: 285 FGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAE 344
H D G V C+ CG+ GH + C + + + SCYNCG
Sbjct: 116 PNHF----AKDCQAGSVKCYSCGKSGHI-------SKECTLASDKVTK----SCYNCGQT 160
Query: 345 GHFARECV 352
GH A++CV
Sbjct: 161 GHIAKDCV 168
>gi|403416646|emb|CCM03346.1| predicted protein [Fibroporia radiculosa]
Length = 641
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 81/225 (36%), Gaps = 49/225 (21%)
Query: 146 DNGDEGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQ-------TCYNCGEEG-HMAVNCR 197
+ GDE +E D R+ RYF+ G + C NCG EG H C
Sbjct: 251 EEGDEEDNYIEYLDYDDDRRAPGMIRYFETVQEGDKLSKPKTIVCKNCGAEGDHKTYECP 310
Query: 198 SAVKRKKPCFVCGSL-EHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQV---CL 253
+ C CG+ EH R C ++ CF C GH KDCP++H SG +A C
Sbjct: 311 VLI-----CLTCGARDEHSTRSCPISKTCFNCGMKGHINKDCPNRH-SGRNSANYFNDCD 364
Query: 254 KCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTG 313
+CG H C + L + + D +
Sbjct: 365 RCGARSHTSDECPTLWRLYEY------------------VDDTERQNI------------ 394
Query: 314 LHWNSCMQACARSR-GETVEASPSSCYNCGAEGHFARECVSSSKV 357
L Q A + GE AS CYNCG GH +C S V
Sbjct: 395 LQTREAKQTLALGKGGEGYIASDEWCYNCGGCGHLGDDCKDISPV 439
>gi|147835847|emb|CAN70803.1| hypothetical protein VITISV_044067 [Vitis vinifera]
Length = 1850
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 68/191 (35%), Gaps = 54/191 (28%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK-------AQDCFICKKGGHR 234
C+NC E GH A NC + C CG H R CS + C C K GH
Sbjct: 1620 LCWNCQEPGHTASNC----PNEGICHTCGKTGHLARDCSAPPVPPGDLRLCNNCYKQGHI 1675
Query: 235 AKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNIS 294
A DC N + C C +GH CRN + C +C GH+
Sbjct: 1676 AADC--------TNDKACNNCRKTGHLARDCRN--------DPVCNLCNVSGHVARQCPK 1719
Query: 295 DAVPG------------EVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCG 342
V G ++ C C QLGH + CA A C NCG
Sbjct: 1720 ANVLGDRGGGPRSSGFRDIVCRNCQQLGHMS-------RDCA--------APLMICRNCG 1764
Query: 343 AEGHFARECVS 353
GH A EC S
Sbjct: 1765 GRGHMAFECPS 1775
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 45/121 (37%), Gaps = 33/121 (27%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
+ C NC ++GH+A +C + K C C H R C C +C GH A+ CP
Sbjct: 1664 RLCNNCYKQGHIAADCTN----DKACNNCRKTGHLARDCRNDPVCNLCNVSGHVARQCPK 1719
Query: 241 KH----------KSGFQN-------------------AQVCLKCGDSGHDMFSCRNSYSL 271
+ SGF++ +C CG GH F C + +
Sbjct: 1720 ANVLGDRGGGPRSSGFRDIVCRNCQQLGHMSRDCAAPLMICRNCGGRGHMAFECPSGRFM 1779
Query: 272 D 272
D
Sbjct: 1780 D 1780
>gi|221222052|gb|ACM09687.1| Cellular nucleic acid-binding protein [Salmo salar]
Length = 140
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 65/161 (40%), Gaps = 47/161 (29%)
Query: 206 CFVCGSLEHGVRQCSKAQD--------------CFICKKGGHRAKDCPDKHKSGFQNAQV 251
CF CG H ++ C +A C+ C + GH A+DC Q
Sbjct: 8 CFRCGRPGHWIKNCPEAGGRGRGRGRGRGKDLFCYRCGEQGHIARDCE-------QTEDA 60
Query: 252 CLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGH 311
C C SGH C D E +CY C FGH+ + +V C+RCG++GH
Sbjct: 61 CYNCHRSGHISRDC------DHANEQKCYSCGGFGHI------QKLCDKVKCYRCGEIGH 108
Query: 312 TGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECV 352
+ + +AS +CY CG GH A+EC
Sbjct: 109 VAV--------------QCSKASEVNCYKCGNTGHLAKECT 135
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 54/130 (41%), Gaps = 42/130 (32%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD-CFICKKGGHRAKDCPDK 241
CY CGE+GH+A R C + +D C+ C + GH ++DC
Sbjct: 41 CYRCGEQGHIA-----------------------RDCEQTEDACYNCHRSGHISRDCDHA 77
Query: 242 HKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEV 301
N Q C CG GH C +V+CY C GH V + + EV
Sbjct: 78 ------NEQKCYSCGGFGHIQKLC---------DKVKCYRCGEIGH---VAVQCSKASEV 119
Query: 302 SCFRCGQLGH 311
+C++CG GH
Sbjct: 120 NCYKCGNTGH 129
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD--CFICKKGGHRAKDC 238
Q CY+CG GH+ C K C+ CG + H QCSKA + C+ C GH AK+C
Sbjct: 80 QKCYSCGGFGHIQKLC-----DKVKCYRCGEIGHVAVQCSKASEVNCYKCGNTGHLAKEC 134
>gi|115385941|ref|XP_001209517.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114187964|gb|EAU29664.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 184
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 181 QTCYNCGEEGHMAVNC-----------RSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICK 229
Q CY CG GH+A NC R++ C+ CG H R C+ Q C+ C
Sbjct: 91 QECYKCGRVGHIARNCPQGGSYGGGFGGGYGGRQQTCYSCGGFGHMARDCTHGQKCYNCG 150
Query: 230 KGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
+ GH ++DCP + K +VC C GH +C N
Sbjct: 151 EVGHVSRDCPTEAK----GERVCYNCKQPGHVQAACPN 184
Score = 41.6 bits (96), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 77/196 (39%), Gaps = 42/196 (21%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGV---------RQCS---KAQDCF 226
G + C+NCGE H + R K P F G + + R+C+ K + C+
Sbjct: 6 GGRGCFNCGEATHQ-LQLRWYAKPISP-FKLGPDPNLILPDHRPGTCRECTVAPKEKSCY 63
Query: 227 ICKKGGHRAKDCPD----KHKSGFQNAQVCLKCGDSGHDMFSC-------RNSYSLDDLK 275
C GH +++CP + G Q C KCG GH +C +
Sbjct: 64 RCGTTGHISRECPQAAGEGYGGGAPGGQECYKCGRVGHIARNCPQGGSYGGGFGGGYGGR 123
Query: 276 EVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASP 335
+ CY C FGH+ D G+ C+ CG++GH + ++GE V
Sbjct: 124 QQTCYSCGGFGHM----ARDCTHGQ-KCYNCGEVGHVSRDCPT------EAKGERV---- 168
Query: 336 SSCYNCGAEGHFAREC 351
CYNC GH C
Sbjct: 169 --CYNCKQPGHVQAAC 182
>gi|10185395|emb|CAC08539.1| CCHC zinc finger protein [Trypanosoma brucei]
Length = 140
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 64/136 (47%), Gaps = 19/136 (13%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
+TCYNCG GHM+ C +A G++ G + C+ C + H ++DCP+
Sbjct: 11 RTCYNCGHAGHMSRECPNARSG-------GNMGGG-------RSCYNCGQPDHISRDCPN 56
Query: 241 KHKSG-FQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQ-CYICRCFGHLC--CVNIS-D 295
G + C CG GH C N+ S ++ + CY C+ GH+ C N D
Sbjct: 57 ARTGGNMGGGRSCYNCGRPGHISRDCPNARSGGNMGGGRACYHCQQEGHIARECPNAPLD 116
Query: 296 AVPGEVSCFRCGQLGH 311
A G +CF CGQ GH
Sbjct: 117 AAAGGRACFNCGQPGH 132
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 14/101 (13%)
Query: 179 GWQTCYNCGEEGHMAVNCRSA-----VKRKKPCFVCGSLEHGVRQCSKAQD--------- 224
G ++CYNCG+ H++ +C +A + + C+ CG H R C A+
Sbjct: 37 GGRSCYNCGQPDHISRDCPNARTGGNMGGGRSCYNCGRPGHISRDCPNARSGGNMGGGRA 96
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
C+ C++ GH A++CP+ + C CG GH +C
Sbjct: 97 CYHCQQEGHIARECPNAPLDAAAGGRACFNCGQPGHLSRAC 137
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 16/141 (11%)
Query: 218 QCSKAQDCFICKKGGHRAKDCPDKHKSG-FQNAQVCLKCGDSGHDMFSCRNSYSLDDLKE 276
Q S A+ C+ C GH +++CP+ G + C CG H C N+ + ++
Sbjct: 6 QMSNARTCYNCGHAGHMSRECPNARSGGNMGGGRSCYNCGQPDHISRDCPNARTGGNMGG 65
Query: 277 VQ-CYICRCFGHLC--CVNISDA--VPGEVSCFRCGQLGHTGLHW-NSCMQACARSRGET 330
+ CY C GH+ C N + G +C+ C Q GH N+ + A A R
Sbjct: 66 GRSCYNCGRPGHISRDCPNARSGGNMGGGRACYHCQQEGHIARECPNAPLDAAAGGR--- 122
Query: 331 VEASPSSCYNCGAEGHFAREC 351
+C+NCG GH +R C
Sbjct: 123 ------ACFNCGQPGHLSRAC 137
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 13/76 (17%)
Query: 179 GWQTCYNCGEEGHMAVNCRSA-----VKRKKPCFVCGSLEHGVRQCSKA--------QDC 225
G ++CYNCG GH++ +C +A + + C+ C H R+C A + C
Sbjct: 65 GGRSCYNCGRPGHISRDCPNARSGGNMGGGRACYHCQQEGHIARECPNAPLDAAAGGRAC 124
Query: 226 FICKKGGHRAKDCPDK 241
F C + GH ++ CP K
Sbjct: 125 FNCGQPGHLSRACPVK 140
>gi|319921907|gb|ADV78572.1| universal minicircle sequence-binding protein 2 [Leishmania
donovani]
Length = 175
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK-------AQDCFICKKGGH 233
++CYNCGE GHM+ +C S ++ K C+ CGS +H R+C+ + C+ C GH
Sbjct: 86 RSCYNCGETGHMSRDCPSE-RKPKSCYNCGSTDHLSRECTNEAKAGADTRSCYNCGGTGH 144
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGH 260
++DCP++ K + C CG + H
Sbjct: 145 LSRDCPNERK-----PKSCYNCGSTDH 166
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 12/111 (10%)
Query: 182 TCYNCGEEGHMAVNC-RSAVKRKKPCFVCGSLEHGVRQCS---KAQDCFICKKGGHRAKD 237
TCY CGE GHM+ +C R+A R C+ CG H R C K + C+ C H +++
Sbjct: 65 TCYKCGEAGHMSRSCPRAAATRS--CYNCGETGHMSRDCPSERKPKSCYNCGSTDHLSRE 122
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C ++ K+G + + C CG +GH C N + K CY C HL
Sbjct: 123 CTNEAKAG-ADTRSCYNCGGTGHLSRDCPN-----ERKPKSCYNCGSTDHL 167
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKR---KKPCFVCGSLEHGVRQCS---KAQDCFIC 228
P +R ++CYNCG H++ C + K + C+ CG H R C K + C+ C
Sbjct: 102 PSERKPKSCYNCGSTDHLSRECTNEAKAGADTRSCYNCGGTGHLSRDCPNERKPKSCYNC 161
Query: 229 KKGGHRAKDCPDKH 242
H +++CPD+H
Sbjct: 162 GSTDHLSRECPDRH 175
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 21/87 (24%)
Query: 274 LKEVQCYICRCFGHLCCVNISDAVP---GEVSCFRCGQLGHTGLHWNSCMQACARSRGET 330
+ + CY C GH+ S + P SC+ CG+ GH SR
Sbjct: 61 MSAITCYKCGEAGHM-----SRSCPRAAATRSCYNCGETGHM-------------SRDCP 102
Query: 331 VEASPSSCYNCGAEGHFARECVSSSKV 357
E P SCYNCG+ H +REC + +K
Sbjct: 103 SERKPKSCYNCGSTDHLSRECTNEAKA 129
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 50/116 (43%), Gaps = 22/116 (18%)
Query: 246 FQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGE---VS 302
+A C KCG++GH SC + + CY C GH+ S P E S
Sbjct: 60 IMSAITCYKCGEAGHMSRSCPRAAATR-----SCYNCGETGHM-----SRDCPSERKPKS 109
Query: 303 CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVR 358
C+ CG H + +A A +R SCYNCG GH +R+C + K +
Sbjct: 110 CYNCGSTDHLSRECTNEAKAGADTR---------SCYNCGGTGHLSRDCPNERKPK 156
>gi|255931619|ref|XP_002557366.1| Pc12g05190 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581985|emb|CAP80146.1| Pc12g05190 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 182
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 21/106 (19%)
Query: 179 GWQTCYNCGEEGHMAVNC-----------------RSAVKRKKPCFVCGSLEHGVRQCSK 221
G Q CY CG+ GH+A NC A R++ C+ CG H R C++
Sbjct: 81 GSQECYKCGQVGHIARNCSQGGNYGGYSAGGYGGFGGAGGRQQTCYSCGGFGHMARDCTQ 140
Query: 222 AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
Q C+ C + GH ++DCP + K ++C KC GH +C N
Sbjct: 141 GQKCYNCGEVGHVSRDCPTEAKG----ERMCYKCKQPGHVQSACPN 182
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 75/200 (37%), Gaps = 34/200 (17%)
Query: 173 FDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKP-CFVCGSLEHGVRQC---SKAQDCFIC 228
F P RG C+NCGE H A +C P + C H R+C +K + C+ C
Sbjct: 3 FPPAGRGG--CFNCGEASHQAKDCPKKGNPTCPNSYNCNGQGHLSRECQEPAKEKSCYRC 60
Query: 229 KKGGHRAKDCPDKHKSGFQN-AQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGH 287
+ GH +++CP S + +Q C KCG GH +C +
Sbjct: 61 GQTGHLSRECPQGGDSNYGGGSQECYKCGQVGHIARNCSQGGNYGGYSAGGY-------- 112
Query: 288 LCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHF 347
A + +C+ CG GH C Q CYNCG GH
Sbjct: 113 ---GGFGGAGGRQQTCYSCGGFGHM---ARDCTQG-------------QKCYNCGEVGHV 153
Query: 348 ARECVSSSKVRKRNIDASTP 367
+R+C + +K + P
Sbjct: 154 SRDCPTEAKGERMCYKCKQP 173
>gi|448531555|ref|XP_003870274.1| Gis2 transcription factor [Candida orthopsilosis Co 90-125]
gi|380354628|emb|CCG24144.1| Gis2 transcription factor [Candida orthopsilosis]
Length = 177
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 78/202 (38%), Gaps = 60/202 (29%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
+TCY CGE GH+A +C + C+ C+K GH + DCP+
Sbjct: 7 RTCYKCGEAGHVADDCTQEERL----------------------CYNCRKPGHESGDCPE 44
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGE 300
++ ++ C CGD GH C N + +CY C FGH+ N A G+
Sbjct: 45 PKQT---TSKQCYSCGDVGHIQTECPN-----QAQGAKCYNCGQFGHIS-KNCDQAPTGQ 95
Query: 301 V-----------------SCFRCGQLGHTG---LHWNSCMQACAR---------SRGETV 331
+C++CG H N+ AC + S
Sbjct: 96 APPFKKSYGPRGGSASGTTCYKCGGPNHFARDCQAGNTKCYACGKPGHISKDCHSAAGGS 155
Query: 332 EASPSSCYNCGAEGHFARECVS 353
A +CYNCG GH +REC +
Sbjct: 156 NAGSKTCYNCGKSGHISRECTA 177
>gi|358369000|dbj|GAA85616.1| zinc knuckle domain protein [Aspergillus kawachii IFO 4308]
Length = 144
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 11/94 (11%)
Query: 181 QTCYNCGEEGHMAVNC-------RSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
Q CY CG GH+A NC R++ C+ CG H R C+ Q C+ C + GH
Sbjct: 55 QECYKCGRVGHIARNCPQSGGYGGGFGGRQQTCYSCGGFGHMARDCTNGQKCYNCGEVGH 114
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
++DCP + K +VC C GH +C N
Sbjct: 115 VSRDCPTEAK----GERVCYNCKQPGHVQAACPN 144
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 56/145 (38%), Gaps = 35/145 (24%)
Query: 190 GHMAVNCR--SAVKRKKPCFVCGSLEHGVRQCSKA-------------QDCFICKKGGHR 234
G NCR + ++K C+ CG + H R+C + Q+C+ C + GH
Sbjct: 7 GRGCFNCRECTVAPKEKSCYRCGGVGHISRECQASPAEGFGGAAAGGGQECYKCGRVGHI 66
Query: 235 AKDCPDKHKSGFQNA---QVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCV 291
A++CP G Q C CG GH C N + EV GH
Sbjct: 67 ARNCPQSGGYGGGFGGRQQTCYSCGGFGHMARDCTNGQKCYNCGEV--------GH---- 114
Query: 292 NISDAVP----GEVSCFRCGQLGHT 312
+S P GE C+ C Q GH
Sbjct: 115 -VSRDCPTEAKGERVCYNCKQPGHV 138
>gi|343417191|emb|CCD20113.1| nucleic acid binding protein, putative [Trypanosoma vivax Y486]
Length = 502
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 57/131 (43%), Gaps = 24/131 (18%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C+ C ++GHM C + CF CG H + C+K + CF GH + +C K
Sbjct: 78 CFQCHQKGHMMPMCP-----QTRCFNCGHFGHSSQLCAKKRACFHFSMPGHTSTECTRK- 131
Query: 243 KSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVS 302
++C +C + GHDM C S +C++C GHL A EV
Sbjct: 132 ----DMGRLCYRCKEPGHDMAKCPQS--------PRCHMCNQTGHLV------AQCPEVL 173
Query: 303 CFRCGQLGHTG 313
C RC Q GH
Sbjct: 174 CNRCHQKGHMA 184
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 60/149 (40%), Gaps = 30/149 (20%)
Query: 206 CFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHK--SGFQNAQVCLKCGDSGHDMF 263
C C S H R C +C C + GH +DCP + K + +C CG S H
Sbjct: 9 CKNCLSTGHLRRDCPLI-ECAACSRLGHFKEDCPHRRKRPRADNDIGICRSCGSSSHAQA 67
Query: 264 SCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQAC 323
C + +K V+C+ C GH+ + + CF CG GH+ Q C
Sbjct: 68 KCP-----ERIKSVECFQCHQKGHM------MPMCPQTRCFNCGHFGHSS-------QLC 109
Query: 324 ARSRGETVEASPSSCYNCGAEGHFARECV 352
A+ R +C++ GH + EC
Sbjct: 110 AKKR---------ACFHFSMPGHTSTECT 129
>gi|261192892|ref|XP_002622852.1| zinc knuckle domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239588987|gb|EEQ71630.1| zinc knuckle domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|327352663|gb|EGE81520.1| hypothetical protein BDDG_04462 [Ajellomyces dermatitidis ATCC
18188]
Length = 190
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 23/106 (21%)
Query: 181 QTCYNCGEEGHMAVNC-------------------RSAVKRKKPCFVCGSLEHGVRQCSK 221
Q CY CG+ GH+A NC R++ C+ CG H R C++
Sbjct: 89 QECYKCGQVGHIARNCSQSGGYGSAGYGGAGGYGGGYGGGRQQTCYSCGGYGHMARDCTQ 148
Query: 222 AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
Q C+ C + GH ++DCP + K +VC KC +GH +C N
Sbjct: 149 GQKCYNCGEVGHVSRDCPTEAK----GERVCYKCKQTGHVQAACPN 190
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 70/176 (39%), Gaps = 52/176 (29%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA----------- 222
D P +G TCYNCG +GH++ C +A ++K C+ CG H R C+ A
Sbjct: 22 DCPKKGTPTCYNCGGQGHVSREC-TAAPKEKTCYRCGQTGHISRDCTSAGSGDNYTSGGY 80
Query: 223 --------QDCFICKKGGHRAKDCPDKHKSGFQNA---------------QVCLKCGDSG 259
Q+C+ C + GH A++C G Q C CG G
Sbjct: 81 SGGGAAGGQECYKCGQVGHIARNCSQSGGYGSAGYGGAGGYGGGYGGGRQQTCYSCGGYG 140
Query: 260 HDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVP----GEVSCFRCGQLGH 311
H + D + +CY C GH +S P GE C++C Q GH
Sbjct: 141 H--------MARDCTQGQKCYNCGEVGH-----VSRDCPTEAKGERVCYKCKQTGH 183
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 71/193 (36%), Gaps = 43/193 (22%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVKRKKP-CFVCGSLEHGVRQCSKA---QDCFICKKGGHR 234
G + C+NCGE H A +C K+ P C+ CG H R+C+ A + C+ C + GH
Sbjct: 6 GSRGCFNCGEASHQARDC---PKKGTPTCYNCGGQGHVSRECTAAPKEKTCYRCGQTGHI 62
Query: 235 AKDCPDK-----------HKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICR 283
++DC G Q C KCG GH +C S
Sbjct: 63 SRDCTSAGSGDNYTSGGYSGGGAAGGQECYKCGQVGHIARNCSQSGGYGSAGYGGAGG-- 120
Query: 284 CFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGA 343
+ +C+ CG GH C Q CYNCG
Sbjct: 121 -------YGGGYGGGRQQTCYSCGGYGHMA---RDCTQG-------------QKCYNCGE 157
Query: 344 EGHFARECVSSSK 356
GH +R+C + +K
Sbjct: 158 VGHVSRDCPTEAK 170
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 60/164 (36%), Gaps = 33/164 (20%)
Query: 206 CFVCGSLEHGVRQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMF 263
CF CG H R C K C+ C GH +++C K + C +CG +GH
Sbjct: 10 CFNCGEASHQARDCPKKGTPTCYNCGGQGHVSRECTAAPKE-----KTCYRCGQTGHISR 64
Query: 264 SCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQAC 323
C ++ S D+ G C++CGQ+GH +C Q+
Sbjct: 65 DCTSAGSGDNYTSG-------------GYSGGGAAGGQECYKCGQVGHIA---RNCSQSG 108
Query: 324 ARSRGETVEASPS----------SCYNCGAEGHFARECVSSSKV 357
A +CY+CG GH AR+C K
Sbjct: 109 GYGSAGYGGAGGYGGGYGGGRQQTCYSCGGYGHMARDCTQGQKC 152
>gi|241742586|ref|XP_002412390.1| zinc-finger protein, putative [Ixodes scapularis]
gi|215505716|gb|EEC15210.1| zinc-finger protein, putative [Ixodes scapularis]
Length = 481
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 222 AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC--RNSYSLDDLKEVQC 279
A+ CF C++ GHR +DCP Q +C KCG + H +C R S S ++ +C
Sbjct: 334 AKLCFKCRQPGHRVQDCPVMLGDSDQAVGICFKCGSTEHFSSACAVRTSAS-NEFPFAKC 392
Query: 280 YICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+IC+ GHL C N A P C CG + H
Sbjct: 393 FICQQQGHLSRKCPQNEKGAYPRGGHCNFCGAVDH 427
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 13/96 (13%)
Query: 183 CYNCGEEGHMAVNCRSAV----KRKKPCFVCGSLEHGVRQCS---------KAQDCFICK 229
C+ C + GH +C + + CF CGS EH C+ CFIC+
Sbjct: 337 CFKCRQPGHRVQDCPVMLGDSDQAVGICFKCGSTEHFSSACAVRTSASNEFPFAKCFICQ 396
Query: 230 KGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
+ GH ++ CP K + C CG H C
Sbjct: 397 QQGHLSRKCPQNEKGAYPRGGHCNFCGAVDHFKREC 432
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 10/81 (12%)
Query: 279 CYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASP 335
C+ CR GH C V + D+ CF+CG + H++S ACA + E
Sbjct: 337 CFKCRQPGHRVQDCPVMLGDSDQAVGICFKCG----STEHFSS---ACAVRTSASNEFPF 389
Query: 336 SSCYNCGAEGHFARECVSSSK 356
+ C+ C +GH +R+C + K
Sbjct: 390 AKCFICQQQGHLSRKCPQNEK 410
>gi|417398164|gb|JAA46115.1| Putative e3 ubiquitin ligase [Desmodus rotundus]
Length = 271
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C +A++ + C+ CGS EH + +C D CF+
Sbjct: 129 VCFHCRKPGHGIADCPAALESQDMGTGICYRCGSTEHEITKCKANVDPALGEFPFAKCFV 188
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
C + GH ++ CPD K + + C CG GH C S D + V
Sbjct: 189 CGEMGHLSRSCPDNPKGVYADGGCCRLCGSVGHFKKDCPQSQHSDQMVTV 238
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 51/120 (42%), Gaps = 15/120 (12%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGH---LCCVNISDAV 297
K ++ +NA VC C GH + C + D+ CY C H C N+ A+
Sbjct: 119 KRQAAKKNAMVCFHCRKPGHGIADCPAALESQDMGTGICYRCGSTEHEITKCKANVDPAL 178
Query: 298 PGEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
GE CF CG++GH SC + V A C CG+ GHF ++C S
Sbjct: 179 -GEFPFAKCFVCGEMGHLS---RSC-----PDNPKGVYADGGCCRLCGSVGHFKKDCPQS 229
>gi|242791199|ref|XP_002481710.1| zinc knuckle transcription factor (CnjB), putative [Talaromyces
stipitatus ATCC 10500]
gi|218718298|gb|EED17718.1| zinc knuckle transcription factor (CnjB), putative [Talaromyces
stipitatus ATCC 10500]
Length = 446
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 60/137 (43%), Gaps = 16/137 (11%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ-----DCFICKKGGHRAKD 237
C NC E GH A +C K K C CG+ +H +C++ +C C GH AKD
Sbjct: 290 CVNCSEVGHRARDCTQPRKSKFGCRNCGASDHKAAECTEPPNMDNVECRRCNDTGHFAKD 349
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISD 295
CP S + A+ C KCG H C ++D + C C GH C D
Sbjct: 350 CP----SASKVAKACRKCGAEDHLSRDCDQPQNMD---LITCNNCDETGHYGRDCPKPRD 402
Query: 296 AVPGEVSCFRCGQLGHT 312
V C CG++GHT
Sbjct: 403 W--SRVKCTNCGEMGHT 417
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD-----CFIC 228
+PP+ C C + GH A +C SA K K C CG+ +H R C + Q+ C C
Sbjct: 328 EPPNMDNVECRRCNDTGHFAKDCPSASKVAKACRKCGAEDHLSRDCDQPQNMDLITCNNC 387
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
+ GH +DCP K + C CG+ GH C + D
Sbjct: 388 DETGHYGRDCP---KPRDWSRVKCTNCGEMGHTHRRCSKPAAED 428
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 41/96 (42%), Gaps = 11/96 (11%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKAQ----DCFICKKGGHRAK 236
TC NCG+ GH +C + CF CG H C + C IC + GH A
Sbjct: 44 TCRNCGQSGHFVRDCPEPRQGGGGGCFNCGEEGHNKADCPHPRVFKGTCRICNEEGHPAM 103
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
+CP K A+VC C GH + C+ + D
Sbjct: 104 ECPQKP------AEVCKNCRKEGHKIAECKENRQFD 133
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 92/262 (35%), Gaps = 70/262 (26%)
Query: 110 KKRIRVRKKKKKEADKIEIEDQSVIVRKEEQKV-----ETADNGDEGVTTVEISDNIVLR 164
++ ++V K ++IE Q +R E K+ E G E T +++ +
Sbjct: 162 REALKVYMKADPTKTFVDIEKQ---LRAEGAKIYLIALEKQKEGSEAYTLIDLQGKLDCT 218
Query: 165 KLLRGPRYFDP-PDRG-----WQTCYNCGEEGHMAVNCRSAVKRKKP-CFVCGSLEHGVR 217
+++ +F P P RG W T E + R P C CG + H R
Sbjct: 219 YVVK--LFFSPDPRRGTLKERWPTTPE--ENLERLADAGFEYDRMIPKCSNCGEMGHISR 274
Query: 218 QCSKAQ--------DCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY 269
C + + C C + GHRA+DC KS F C CG S H C
Sbjct: 275 ACKQERVEFERVEIKCVNCSEVGHRARDCTQPRKSKFG----CRNCGASDHKAAECTEPP 330
Query: 270 SLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGE 329
++D+ V C RC GH C A ++
Sbjct: 331 NMDN---------------------------VECRRCNDTGHFA---KDCPSASKVAK-- 358
Query: 330 TVEASPSSCYNCGAEGHFAREC 351
+C CGAE H +R+C
Sbjct: 359 -------ACRKCGAEDHLSRDC 373
>gi|433935|emb|CAA53777.1| UMS binding protein [Crithidia fasciculata]
Length = 116
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 10/110 (9%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCS---KAQDCFICKKGGHRAKDC 238
TCY CGE GHM+ C A + C+ CG H R+C K + C+ C H +++C
Sbjct: 6 TCYKCGEAGHMSRECPKAAASRT-CYNCGQTGHLSRECPSERKPKACYNCGSTEHLSREC 64
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
P++ K+G +++ C CG +GH C + K +CY C HL
Sbjct: 65 PNEAKTG-ADSRTCYNCGQTGHLSREC-----PSERKPKRCYNCGSTEHL 108
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 13/93 (13%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-------SKAQDCFI 227
P +TCYNCG+ GH++ C S ++ K C+ CGS EH R+C + ++ C+
Sbjct: 21 PKAAASRTCYNCGQTGHLSRECPSE-RKPKACYNCGSTEHLSRECPNEAKTGADSRTCYN 79
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
C + GH +++CP + K + C CG + H
Sbjct: 80 CGQTGHLSRECPSERK-----PKRCYNCGSTEH 107
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 55/134 (41%), Gaps = 25/134 (18%)
Query: 220 SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQC 279
S A C+ C + GH +++CP S + C CG +GH C + K C
Sbjct: 2 SAAVTCYKCGEAGHMSRECPKAAAS-----RTCYNCGQTGHLSREC-----PSERKPKAC 51
Query: 280 YICRCFGHLC--CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSS 337
Y C HL C N + +C+ CGQ GH SR E P
Sbjct: 52 YNCGSTEHLSRECPNEAKTGADSRTCYNCGQTGHL-------------SRECPSERKPKR 98
Query: 338 CYNCGAEGHFAREC 351
CYNCG+ H +REC
Sbjct: 99 CYNCGSTEHLSREC 112
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKR---KKPCFVCGSLEHGVRQCS---KAQDCFIC 228
P +R + CYNCG H++ C + K + C+ CG H R+C K + C+ C
Sbjct: 43 PSERKPKACYNCGSTEHLSRECPNEAKTGADSRTCYNCGQTGHLSRECPSERKPKRCYNC 102
Query: 229 KKGGHRAKDCPDKH 242
H +++CPD+H
Sbjct: 103 GSTEHLSRECPDRH 116
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 15/81 (18%)
Query: 277 VQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPS 336
V CY C GH+ +C+ CGQ GH SR E P
Sbjct: 5 VTCYKCGEAGHM--SRECPKAAASRTCYNCGQTGHL-------------SRECPSERKPK 49
Query: 337 SCYNCGAEGHFARECVSSSKV 357
+CYNCG+ H +REC + +K
Sbjct: 50 ACYNCGSTEHLSRECPNEAKT 70
>gi|255539441|ref|XP_002510785.1| actin depolymerizing factor, putative [Ricinus communis]
gi|223549900|gb|EEF51387.1| actin depolymerizing factor, putative [Ricinus communis]
Length = 498
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 10/117 (8%)
Query: 206 CFVCGSLEHGVRQCSKAQD------CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSG 259
CF+C + +H + C + + C +C++ GH K CP+K + ++C CG++G
Sbjct: 80 CFICKAKDHIAKLCPQKAEWERNKICLLCRQRGHSLKRCPNKKDENV-DRKLCYNCGETG 138
Query: 260 HDMFSCRNSYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGHTG 313
H + +C K C+IC GHL C N P C CG + H
Sbjct: 139 HSLSNCPQPLKNGGTKYANCFICNESGHLSKDCPQNTRGIYPKGGCCKICGGVTHLA 195
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 58/137 (42%), Gaps = 14/137 (10%)
Query: 223 QDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYIC 282
+ CFICK H AK CP K+ ++ ++CL C GH + C N +++ CY C
Sbjct: 78 ESCFICKAKDHIAKLCP--QKAEWERNKICLLCRQRGHSLKRCPNKKD-ENVDRKLCYNC 134
Query: 283 RCFGHL---CCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCY 339
GH C + + +CF C + GH C Q +RG + C
Sbjct: 135 GETGHSLSNCPQPLKNGGTKYANCFICNESGHLS---KDCPQ---NTRG--IYPKGGCCK 186
Query: 340 NCGAEGHFARECVSSSK 356
CG H AR+C K
Sbjct: 187 ICGGVTHLARDCPEKGK 203
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 15/80 (18%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
+ CYNCGE GH NC +K +K +CFIC + GH +KDCP
Sbjct: 129 KLCYNCGETGHSLSNCPQPLKNGG---------------TKYANCFICNESGHLSKDCPQ 173
Query: 241 KHKSGFQNAQVCLKCGDSGH 260
+ + C CG H
Sbjct: 174 NTRGIYPKGGCCKICGGVTH 193
>gi|258569739|ref|XP_002543673.1| zinc finger CCHC domain-containing protein 13 [Uncinocarpus reesii
1704]
gi|237903943|gb|EEP78344.1| zinc finger CCHC domain-containing protein 13 [Uncinocarpus reesii
1704]
Length = 170
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 76/185 (41%), Gaps = 40/185 (21%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCS---KAQDCFICKKGGHRAKDCP 239
C+NCG+ H A +C K C+ CG R CS K + C+ C GH ++DCP
Sbjct: 8 CFNCGDSAHQARDC--PKKGSLVCYNCGG-----RDCSEPAKEKSCYRCGLTGHISRDCP 60
Query: 240 DKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDD-------------LKEVQCYICRCFG 286
+SG +Q C KCG GH +C + ++ + CY C +G
Sbjct: 61 QGGESGETRSQECYKCGQVGHIARNCSQNTGYNNSGYGAGSYGGGYGSRPQTCYSCGGYG 120
Query: 287 HLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGH 346
H+ D G+ C+ CG++GH + +GE V CY C GH
Sbjct: 121 HM----ARDCTQGQ-KCYNCGEVGHVSRECTT------EGKGERV------CYKCKQPGH 163
Query: 347 FAREC 351
C
Sbjct: 164 VQAAC 168
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 21/104 (20%)
Query: 181 QTCYNCGEEGHMAVNC-----------------RSAVKRKKPCFVCGSLEHGVRQCSKAQ 223
Q CY CG+ GH+A NC R + C+ CG H R C++ Q
Sbjct: 71 QECYKCGQVGHIARNCSQNTGYNNSGYGAGSYGGGYGSRPQTCYSCGGYGHMARDCTQGQ 130
Query: 224 DCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
C+ C + GH +++C + K +VC KC GH +C N
Sbjct: 131 KCYNCGEVGHVSRECTTEGKG----ERVCYKCKQPGHVQAACPN 170
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 63/158 (39%), Gaps = 48/158 (30%)
Query: 220 SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQC 279
S + CF C H+A+DCP K + VC CG G D + KE C
Sbjct: 3 SYQRGCFNCGDSAHQARDCPKK------GSLVCYNCG--GRDC--------SEPAKEKSC 46
Query: 280 YICRCFGHLCCVNISDAVP-----GEV---SCFRCGQLGHTGLHWNSCMQACARSRG--- 328
Y C GH IS P GE C++CGQ+GH + C+++ G
Sbjct: 47 YRCGLTGH-----ISRDCPQGGESGETRSQECYKCGQVGHI-------ARNCSQNTGYNN 94
Query: 329 ---------ETVEASPSSCYNCGAEGHFARECVSSSKV 357
+ P +CY+CG GH AR+C K
Sbjct: 95 SGYGAGSYGGGYGSRPQTCYSCGGYGHMARDCTQGQKC 132
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 37/133 (27%)
Query: 181 QTCYNCGEEGHMAVNC----RSAVKRKKPCFVCGSLEHGVRQCS---------------- 220
++CY CG GH++ +C S R + C+ CG + H R CS
Sbjct: 44 KSCYRCGLTGHISRDCPQGGESGETRSQECYKCGQVGHIARNCSQNTGYNNSGYGAGSYG 103
Query: 221 -----KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLK 275
+ Q C+ C GH A+DC Q C CG+ GH C + +
Sbjct: 104 GGYGSRPQTCYSCGGYGHMARDCTQ--------GQKCYNCGEVGHVSREC----TTEGKG 151
Query: 276 EVQCYICRCFGHL 288
E CY C+ GH+
Sbjct: 152 ERVCYKCKQPGHV 164
>gi|240849635|ref|NP_001155824.1| Zinc finger, CCHC domain containing 9-like [Acyrthosiphon pisum]
gi|239787929|dbj|BAH70666.1| ACYPI009958 [Acyrthosiphon pisum]
Length = 263
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKK--PCFVCGSLEHGVRQCSKAQD--------CFICKK 230
+ C++C + GHM C CF CGS EH + +C A + CFIC +
Sbjct: 115 KACFHCRQPGHMLNQCPELGTNTALGVCFKCGSTEHKLHECRNAGNNDQLDFAKCFICNE 174
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
GH ++ CPD + N C CGD H C
Sbjct: 175 EGHLSRQCPDNPMGLYPNGGACRSCGDVTHFAKDC 209
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQ-VCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICR 283
CF C++ GH CP+ G A VC KCG + H + CRN+ + D L +C+IC
Sbjct: 117 CFHCRQPGHMLNQCPE---LGTNTALGVCFKCGSTEHKLHECRNAGNNDQLDFAKCFICN 173
Query: 284 CFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
GHL C N P +C CG + H
Sbjct: 174 EEGHLSRQCPDNPMGLYPNGGACRSCGDVTH 204
>gi|239613570|gb|EEQ90557.1| zinc knuckle domain-containing protein [Ajellomyces dermatitidis
ER-3]
Length = 185
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 23/106 (21%)
Query: 181 QTCYNCGEEGHMAVNC-------------------RSAVKRKKPCFVCGSLEHGVRQCSK 221
Q CY CG+ GH+A NC R++ C+ CG H R C++
Sbjct: 84 QECYKCGQVGHIARNCSQSGGYGSAGYGGAGGYGGGYGGGRQQTCYSCGGYGHMARDCTQ 143
Query: 222 AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
Q C+ C + GH ++DCP + K +VC KC +GH +C N
Sbjct: 144 GQKCYNCGEVGHVSRDCPTEAK----GERVCYKCKQTGHVQAACPN 185
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 77/203 (37%), Gaps = 55/203 (27%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVKRKKP-CFVCGSLEHGVRQCSKA---QDCFICKKGGHR 234
G + C+NCGE H A +C K+ P C+ CG R+C+ A + C+ C + GH
Sbjct: 6 GSRGCFNCGEASHQARDC---PKKGTPTCYNCGG-----RECTAAPKEKTCYRCGQTGHI 57
Query: 235 AKDCPD-----------KHKSGFQNAQVCLKCGDSGHDMFSCRN---------------S 268
++DC G Q C KCG GH +C
Sbjct: 58 SRDCTSAGSGDNYTSGGYSGGGAAGGQECYKCGQVGHIARNCSQSGGYGSAGYGGAGGYG 117
Query: 269 YSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRG 328
++ CY C +GH+ D G+ C+ CG++GH + ++G
Sbjct: 118 GGYGGGRQQTCYSCGGYGHM----ARDCTQGQ-KCYNCGEVGHVSRDCPT------EAKG 166
Query: 329 ETVEASPSSCYNCGAEGHFAREC 351
E V CY C GH C
Sbjct: 167 ERV------CYKCKQTGHVQAAC 183
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 58/159 (36%), Gaps = 37/159 (23%)
Query: 220 SKAQDCFICKKGGHRAKDCPDKHKSGFQNA-----------QVCLKCGDSGHDMFSCRNS 268
S ++ CF C + H+A+DCP K N + C +CG +GH C ++
Sbjct: 5 SGSRGCFNCGEASHQARDCPKKGTPTCYNCGGRECTAAPKEKTCYRCGQTGHISRDCTSA 64
Query: 269 YSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRG 328
S D+ G C++CGQ+GH +C Q+
Sbjct: 65 GSGDNYTSG-------------GYSGGGAAGGQECYKCGQVGHIA---RNCSQSGGYGSA 108
Query: 329 ETVEASPS----------SCYNCGAEGHFARECVSSSKV 357
A +CY+CG GH AR+C K
Sbjct: 109 GYGGAGGYGGGYGGGRQQTCYSCGGYGHMARDCTQGQKC 147
>gi|156720287|dbj|BAF76796.1| Vasa-related protein [Enchytraeus japonensis]
Length = 990
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 51/120 (42%), Gaps = 22/120 (18%)
Query: 178 RGWQTCYNCGEEGHMAVNCRSAVKRK--------KPCFVCGSLEHGVRQCSKAQD----- 224
R + CYNCG EGHM +C K + + CF CGS H R C + +
Sbjct: 349 RPLRACYNCGNEGHMTRDCTEPRKERSNENSRPPRACFNCGSEAHMSRDCPEPKKERPND 408
Query: 225 -------CFICKKGGHRAKDCPD--KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLK 275
CF C H +++CP+ K + G + + VC +C GH C +D K
Sbjct: 409 NSRPPRACFNCGSEAHMSRECPEPKKEREGGKPSGVCFRCDLEGHMAKDCSKPALTEDGK 468
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 75/221 (33%), Gaps = 48/221 (21%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC--------SKAQDCFICKKGGHR 234
C+NCG+EGH + +C + S+ + CF C + GH
Sbjct: 221 CFNCGQEGHGSRDCPQLSNSGGGNGGGAAGGVNGGGVAGRVSGGGSQNRGCFNCGQDGHM 280
Query: 235 AKDCPDKHK--------------------------SGFQNAQVCLKCGDSGHDMFSC--- 265
++DCP+ + G + + C CG H C
Sbjct: 281 SRDCPEPRRDRGAMPNDRGDSRRTNDGMRNDGMRGEGARGPRACYNCGSDAHMSRDCPEP 340
Query: 266 RNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVPGEVS-----CFRCGQLGHTGLHWNS 318
R S D CY C GH+ C E S CF CG H
Sbjct: 341 RKERSNDSRPLRACYNCGNEGHMTRDCTEPRKERSNENSRPPRACFNCGSEAHMS---RD 397
Query: 319 CMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVRK 359
C + + R P +C+NCG+E H +REC K R+
Sbjct: 398 CPEP-KKERPNDNSRPPRACFNCGSEAHMSRECPEPKKERE 437
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 78/196 (39%), Gaps = 35/196 (17%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVC----------GSLEHGVRQ--CSKAQDCFICKK 230
C+NCG++GHM+ +C +R + G G+R + C+ C
Sbjct: 271 CFNCGQDGHMSRDCPEP-RRDRGAMPNDRGDSRRTNDGMRNDGMRGEGARGPRACYNCGS 329
Query: 231 GGHRAKDCPDKHKSGFQNAQ---VCLKCGDSGHDMFSC---RNSYSLDDLKEVQ-CYICR 283
H ++DCP+ K +++ C CG+ GH C R S ++ + + C+ C
Sbjct: 330 DAHMSRDCPEPRKERSNDSRPLRACYNCGNEGHMTRDCTEPRKERSNENSRPPRACFNCG 389
Query: 284 CFGHLC--CVNISDAVPGEVS-----CFRCGQLGHTGLHWNSCMQACARSRGETVEASPS 336
H+ C P + S CF CG H + C + E PS
Sbjct: 390 SEAHMSRDCPEPKKERPNDNSRPPRACFNCGSEAHMS-------RECPEPKKEREGGKPS 442
Query: 337 S-CYNCGAEGHFAREC 351
C+ C EGH A++C
Sbjct: 443 GVCFRCDLEGHMAKDC 458
>gi|401420034|ref|XP_003874506.1| universal minicircle sequence binding protein,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322490742|emb|CBZ26006.1| universal minicircle sequence binding protein,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 115
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 13/93 (13%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK-------AQDCFI 227
P ++CYNCGE GH++ +C S ++ K C+ CGS EH R+C+ + C+
Sbjct: 20 PRAAATRSCYNCGETGHLSRDCPSE-RKPKSCYNCGSTEHLSRECTNEAKAGADTRSCYN 78
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
C GH ++DCP++ K + C CG + H
Sbjct: 79 CGGTGHMSRDCPNERK-----PKSCYNCGSTEH 106
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 12/111 (10%)
Query: 182 TCYNCGEEGHMAVNC-RSAVKRKKPCFVCGSLEHGVRQCS---KAQDCFICKKGGHRAKD 237
TCY CGE GHM+ +C R+A R C+ CG H R C K + C+ C H +++
Sbjct: 5 TCYKCGEAGHMSRSCPRAAATRS--CYNCGETGHLSRDCPSERKPKSCYNCGSTEHLSRE 62
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C ++ K+G + + C CG +GH C N + K CY C HL
Sbjct: 63 CTNEAKAG-ADTRSCYNCGGTGHMSRDCPN-----ERKPKSCYNCGSTEHL 107
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKR---KKPCFVCGSLEHGVRQCS---KAQDCFIC 228
P +R ++CYNCG H++ C + K + C+ CG H R C K + C+ C
Sbjct: 42 PSERKPKSCYNCGSTEHLSRECTNEAKAGADTRSCYNCGGTGHMSRDCPNERKPKSCYNC 101
Query: 229 KKGGHRAKDCPDKH 242
H +++CPD+H
Sbjct: 102 GSTEHLSRECPDRH 115
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 21/87 (24%)
Query: 274 LKEVQCYICRCFGHLCCVNISDAVP---GEVSCFRCGQLGHTGLHWNSCMQACARSRGET 330
+ + CY C GH+ S + P SC+ CG+ GH SR
Sbjct: 1 MSAITCYKCGEAGHM-----SRSCPRAAATRSCYNCGETGHL-------------SRDCP 42
Query: 331 VEASPSSCYNCGAEGHFARECVSSSKV 357
E P SCYNCG+ H +REC + +K
Sbjct: 43 SERKPKSCYNCGSTEHLSRECTNEAKA 69
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 50/115 (43%), Gaps = 22/115 (19%)
Query: 247 QNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGE---VSC 303
+A C KCG++GH SC + + CY C GHL S P E SC
Sbjct: 1 MSAITCYKCGEAGHMSRSCPRAAATR-----SCYNCGETGHL-----SRDCPSERKPKSC 50
Query: 304 FRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVR 358
+ CG H + +A A +R SCYNCG GH +R+C + K +
Sbjct: 51 YNCGSTEHLSRECTNEAKAGADTR---------SCYNCGGTGHMSRDCPNERKPK 96
>gi|157876786|ref|XP_001686735.1| universal minicircle sequence binding protein [Leishmania major
strain Friedlin]
gi|68129810|emb|CAJ09116.1| universal minicircle sequence binding protein [Leishmania major
strain Friedlin]
Length = 175
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK-------AQDCFICKKGGH 233
++CYNCGE GHM+ +C S ++ K C+ CGS +H R+C+ + C+ C GH
Sbjct: 86 RSCYNCGETGHMSRDCPSE-RKPKSCYNCGSTDHLSRECTNEAKAGADTRSCYNCGGTGH 144
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGH 260
++DCP++ K + C CG + H
Sbjct: 145 LSRDCPNERK-----PKSCYNCGSTDH 166
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 12/111 (10%)
Query: 182 TCYNCGEEGHMAVNC-RSAVKRKKPCFVCGSLEHGVRQCS---KAQDCFICKKGGHRAKD 237
TCY CGE GHM+ +C R+A R C+ CG H R C K + C+ C H +++
Sbjct: 65 TCYKCGEAGHMSRSCPRAAATRS--CYNCGETGHMSRDCPSERKPKSCYNCGSTDHLSRE 122
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C ++ K+G + + C CG +GH C N + K CY C HL
Sbjct: 123 CTNEAKAG-ADTRSCYNCGGTGHLSRDCPN-----ERKPKSCYNCGSTDHL 167
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKR---KKPCFVCGSLEHGVRQCS---KAQDCFIC 228
P +R ++CYNCG H++ C + K + C+ CG H R C K + C+ C
Sbjct: 102 PSERKPKSCYNCGSTDHLSRECTNEAKAGADTRSCYNCGGTGHLSRDCPNERKPKSCYNC 161
Query: 229 KKGGHRAKDCPDKH 242
H +++CPD+H
Sbjct: 162 GSTDHLSRECPDRH 175
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 21/87 (24%)
Query: 274 LKEVQCYICRCFGHLCCVNISDAVP---GEVSCFRCGQLGHTGLHWNSCMQACARSRGET 330
+ V CY C GH+ S + P SC+ CG+ GH SR
Sbjct: 61 MSAVTCYKCGEAGHM-----SRSCPRAAATRSCYNCGETGHM-------------SRDCP 102
Query: 331 VEASPSSCYNCGAEGHFARECVSSSKV 357
E P SCYNCG+ H +REC + +K
Sbjct: 103 SERKPKSCYNCGSTDHLSRECTNEAKA 129
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 50/116 (43%), Gaps = 22/116 (18%)
Query: 246 FQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGE---VS 302
+A C KCG++GH SC + + CY C GH+ S P E S
Sbjct: 60 IMSAVTCYKCGEAGHMSRSCPRAAATR-----SCYNCGETGHM-----SRDCPSERKPKS 109
Query: 303 CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVR 358
C+ CG H + +A A +R SCYNCG GH +R+C + K +
Sbjct: 110 CYNCGSTDHLSRECTNEAKAGADTR---------SCYNCGGTGHLSRDCPNERKPK 156
>gi|300122354|emb|CBK22926.2| unnamed protein product [Blastocystis hominis]
Length = 158
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 73/183 (39%), Gaps = 43/183 (23%)
Query: 183 CYNCGEEGHMAVNCRSAVKRK----KPCFVCGSLEHGVRQCSKAQD------CFICKKGG 232
CY CG+ GH A +C + ++K K C+VCG H R C C+ C K G
Sbjct: 3 CYVCGQSGHKARDCPNRSQQKPGAGKKCYVCGGFGHVARDCPNQNGENTESVCYNCGKPG 62
Query: 233 HRAKDCPDKHKSG----FQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
H A DCP++ S +C C GH ++ D EV C CR GH
Sbjct: 63 HIAADCPEERTSRPTGRAAKTIICRNCNKEGH--------FARDCPNEVVCRNCRQPGH- 113
Query: 289 CCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFA 348
I+ + C C Q GH + ETV C+ CG GH A
Sbjct: 114 ----IARDCTNQAVCRNCNQPGHFARDCPN----------ETV------CHKCGQSGHKA 153
Query: 349 REC 351
R+C
Sbjct: 154 RDC 156
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 43/97 (44%), Gaps = 14/97 (14%)
Query: 171 RYFDPPDRGWQT--CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFIC 228
R P R +T C NC +EGH A +C + V C C H R C+ C C
Sbjct: 72 RTSRPTGRAAKTIICRNCNKEGHFARDCPNEVV----CRNCRQPGHIARDCTNQAVCRNC 127
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
+ GH A+DCP N VC KCG SGH C
Sbjct: 128 NQPGHFARDCP--------NETVCHKCGQSGHKARDC 156
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 52/135 (38%), Gaps = 30/135 (22%)
Query: 224 DCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICR 283
+C++C + GH+A+DCP++ + + C CG GH C N +
Sbjct: 2 ECYVCGQSGHKARDCPNRSQQKPGAGKKCYVCGGFGHVARDCPNQNGENT---------- 51
Query: 284 CFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGA 343
E C+ CG+ GH C + SR A C NC
Sbjct: 52 ----------------ESVCYNCGKPGHIAA---DCPEE-RTSRPTGRAAKTIICRNCNK 91
Query: 344 EGHFARECVSSSKVR 358
EGHFAR+C + R
Sbjct: 92 EGHFARDCPNEVVCR 106
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 39/97 (40%), Gaps = 13/97 (13%)
Query: 277 VQCYICRCFGHLC--CVNISDAVPGE-VSCFRCGQLGHTGLHWNSCMQACARSRGETVEA 333
++CY+C GH C N S PG C+ CG GH + C GE E
Sbjct: 1 MECYVCGQSGHKARDCPNRSQQKPGAGKKCYVCGGFGHV-------ARDCPNQNGENTE- 52
Query: 334 SPSSCYNCGAEGHFARECVSSSKVRKRNIDASTPTFR 370
S CYNCG GH A +C R A T R
Sbjct: 53 --SVCYNCGKPGHIAADCPEERTSRPTGRAAKTIICR 87
>gi|444729593|gb|ELW70004.1| Zinc finger CCHC domain-containing protein 9 [Tupaia chinensis]
Length = 270
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 14/111 (12%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CF 226
C++C + GH +C +A++ + C+ CGS EH + +C D CF
Sbjct: 127 MVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCF 186
Query: 227 ICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
+C + GH ++ CPD K + + C CG H M C S + D + V
Sbjct: 187 VCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLMKDCPKSQNSDRMVTV 237
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C+K GH DCP ++ +C +CG + H++ C+ +L
Sbjct: 119 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 178
Query: 273 DLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+ +C++C GHL C N C CG + H
Sbjct: 179 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEH 220
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVP 298
K ++ +NA VC C GH + C + D+ CY C H C D
Sbjct: 118 KRQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPAL 177
Query: 299 GEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
GE CF CG++GH ++C + + A C CG+ H ++C S
Sbjct: 178 GEFPFAKCFVCGEMGHLS-------RSCP-DNPKGLYADGGGCKLCGSVEHLMKDCPKS 228
>gi|444314443|ref|XP_004177879.1| hypothetical protein TBLA_0A05670 [Tetrapisispora blattae CBS 6284]
gi|387510918|emb|CCH58360.1| hypothetical protein TBLA_0A05670 [Tetrapisispora blattae CBS 6284]
Length = 173
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 49/99 (49%), Gaps = 19/99 (19%)
Query: 181 QTCYNCGEEGHMAVNCRS-----------------AVKRKKPCFVCGSLEHGVRQCSKAQ 223
Q CY+CGE GHM+ +C S A + C+ CG H R C +++
Sbjct: 66 QRCYSCGETGHMSRDCPSGNSNGRRGGRFHNNRGGAGGSRVSCYKCGGPNHMARDCLQSE 125
Query: 224 D-CFICKKGGHRAKDCPDKHKS-GFQNAQVCLKCGDSGH 260
C+ C K GH A+DCP S G N +VC CG+SGH
Sbjct: 126 SKCYSCGKFGHLARDCPASGMSGGASNDRVCYACGESGH 164
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 77/193 (39%), Gaps = 46/193 (23%)
Query: 181 QTCYNCGEEGHMAVNCRS-----------------AVKRK---KPCFVCGSLEHGVRQCS 220
+ CY CG+ GH+A +C S ++R K C+ CG H +C+
Sbjct: 5 KACYVCGKIGHLADDCESEKLCYNCNQPGHLQSECTMERTAEFKQCYACGETGHVRSECT 64
Query: 221 KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCY 280
AQ C+ C + GH ++DCP + +G + + N+ V CY
Sbjct: 65 -AQRCYSCGETGHMSRDCPSGNSNGRRGGRF--------------HNNRGGAGGSRVSCY 109
Query: 281 ICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYN 340
C H+ D + E C+ CG+ GH + C S ++ CY
Sbjct: 110 KCGGPNHM----ARDCLQSESKCYSCGKFGHL-------ARDCPASGMSGGASNDRVCYA 158
Query: 341 CGAEGHFARECVS 353
CG GH +R+C S
Sbjct: 159 CGESGHISRDCPS 171
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 12/69 (17%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC---------SKAQDCFICKKGG 232
+CY CG HMA +C ++ + C+ CG H R C S + C+ C + G
Sbjct: 107 SCYKCGGPNHMARDC---LQSESKCYSCGKFGHLARDCPASGMSGGASNDRVCYACGESG 163
Query: 233 HRAKDCPDK 241
H ++DCP K
Sbjct: 164 HISRDCPSK 172
>gi|221222214|gb|ACM09768.1| Cellular nucleic acid-binding protein [Salmo salar]
Length = 143
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 69/181 (38%), Gaps = 61/181 (33%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP----------CFVCGSLEHGVRQCSKAQD-CFICKKG 231
C+ CG GH NC A R + C+ CG H R C + +D C+ C +
Sbjct: 8 CFRCGRPGHWIKNCPEAGGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDACYNCHRS 67
Query: 232 GHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCV 291
GH ++DC + K + Q C CG +GH C
Sbjct: 68 GHISRDCKEPKK---EREQCCYSCGKAGHIQKLC-------------------------- 98
Query: 292 NISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
+V C+RCG++GH + + +AS +CY CG GH A+EC
Sbjct: 99 -------DKVKCYRCGEIGHVAV--------------QCSKASEVNCYKCGNTGHLAKEC 137
Query: 352 V 352
Sbjct: 138 T 138
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD--CFICKKG 231
+P Q CY+CG+ GH+ C K C+ CG + H QCSKA + C+ C
Sbjct: 76 EPKKEREQCCYSCGKAGHIQKLC-----DKVKCYRCGEIGHVAVQCSKASEVNCYKCGNT 130
Query: 232 GHRAKDC 238
GH AK+C
Sbjct: 131 GHLAKEC 137
>gi|146104175|ref|XP_001469750.1| putative universal minicircle sequence binding protein [Leishmania
infantum JPCM5]
gi|398024244|ref|XP_003865283.1| universal minicircle sequence binding protein, putative [Leishmania
donovani]
gi|134074120|emb|CAM72862.1| putative universal minicircle sequence binding protein [Leishmania
infantum JPCM5]
gi|322503520|emb|CBZ38606.1| universal minicircle sequence binding protein, putative [Leishmania
donovani]
Length = 115
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 13/93 (13%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK-------AQDCFI 227
P ++CYNCGE GHM+ +C S ++ K C+ CGS +H R+C+ + C+
Sbjct: 20 PRAAATRSCYNCGETGHMSRDCPSE-RKPKSCYNCGSTDHLSRECTNEAKAGADTRSCYN 78
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
C GH ++DCP++ K + C CG + H
Sbjct: 79 CGGTGHLSRDCPNERK-----PKSCYNCGSTDH 106
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 12/111 (10%)
Query: 182 TCYNCGEEGHMAVNC-RSAVKRKKPCFVCGSLEHGVRQCS---KAQDCFICKKGGHRAKD 237
TCY CGE GHM+ +C R+A R C+ CG H R C K + C+ C H +++
Sbjct: 5 TCYKCGEAGHMSRSCPRAAATRS--CYNCGETGHMSRDCPSERKPKSCYNCGSTDHLSRE 62
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C ++ K+G + + C CG +GH C N + K CY C HL
Sbjct: 63 CTNEAKAG-ADTRSCYNCGGTGHLSRDCPN-----ERKPKSCYNCGSTDHL 107
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKR---KKPCFVCGSLEHGVRQCS---KAQDCFIC 228
P +R ++CYNCG H++ C + K + C+ CG H R C K + C+ C
Sbjct: 42 PSERKPKSCYNCGSTDHLSRECTNEAKAGADTRSCYNCGGTGHLSRDCPNERKPKSCYNC 101
Query: 229 KKGGHRAKDCPDKH 242
H +++CPD+H
Sbjct: 102 GSTDHLSRECPDRH 115
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 21/87 (24%)
Query: 274 LKEVQCYICRCFGHLCCVNISDAVP---GEVSCFRCGQLGHTGLHWNSCMQACARSRGET 330
+ + CY C GH+ S + P SC+ CG+ GH SR
Sbjct: 1 MSAITCYKCGEAGHM-----SRSCPRAAATRSCYNCGETGHM-------------SRDCP 42
Query: 331 VEASPSSCYNCGAEGHFARECVSSSKV 357
E P SCYNCG+ H +REC + +K
Sbjct: 43 SERKPKSCYNCGSTDHLSRECTNEAKA 69
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 22/115 (19%)
Query: 247 QNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGE---VSC 303
+A C KCG++GH SC + + CY C GH+ S P E SC
Sbjct: 1 MSAITCYKCGEAGHMSRSCPRAAATR-----SCYNCGETGHM-----SRDCPSERKPKSC 50
Query: 304 FRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVR 358
+ CG H + +A A +R SCYNCG GH +R+C + K +
Sbjct: 51 YNCGSTDHLSRECTNEAKAGADTR---------SCYNCGGTGHLSRDCPNERKPK 96
>gi|336268999|ref|XP_003349261.1| hypothetical protein SMAC_05545 [Sordaria macrospora k-hell]
gi|380089834|emb|CCC12367.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 436
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 67/175 (38%), Gaps = 40/175 (22%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDC 238
G C NCGE GH+ +C ++K+ + CF C + GHR +DC
Sbjct: 230 GIPKCGNCGELGHIRKSCPEEPEQKEEVVI---------------KCFNCDEVGHRIRDC 274
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVP 298
P F C CG +GH + C S ++ V+C C GH S P
Sbjct: 275 PIPRVDKF----ACKNCGQNGHKVADCTEPRSAEN---VECRKCNETGHF-----SKDCP 322
Query: 299 --GEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
G C CGQ GH ++ E C NC GHF++EC
Sbjct: 323 KTGPRGCRNCGQEGHM-----------SKECTEPKNMDNVQCRNCDEMGHFSKEC 366
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 56/136 (41%), Gaps = 18/136 (13%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ-----DCFICKKGGHRAKD 237
C+NC E GH +C K C CG H V C++ + +C C + GH +KD
Sbjct: 261 CFNCDEVGHRIRDCPIPRVDKFACKNCGQNGHKVADCTEPRSAENVECRKCNETGHFSKD 320
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISD 295
CP G C CG GH C ++D+ VQC C GH C D
Sbjct: 321 CPKTGPRG------CRNCGQEGHMSKECTEPKNMDN---VQCRNCDEMGHFSKECPKPRD 371
Query: 296 AVPGEVSCFRCGQLGH 311
V C C ++GH
Sbjct: 372 IT--RVKCSNCQEMGH 385
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 10/96 (10%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKK-PCFVCGSLEHGVRQCSKAQD-----CFI 227
D P G + C NCG+EGHM+ C C C + H ++C K +D C
Sbjct: 320 DCPKTGPRGCRNCGQEGHMSKECTEPKNMDNVQCRNCDEMGHFSKECPKPRDITRVKCSN 379
Query: 228 CKKGGHRAKDCP----DKHKSGFQNAQVCLKCGDSG 259
C++ GH CP D+ +G N Q GD+
Sbjct: 380 CQEMGHYKSKCPNPLVDEDAAGGFNTQGFGNAGDNA 415
>gi|157876783|ref|XP_001686734.1| putative universal minicircle sequence binding protein [Leishmania
major strain Friedlin]
gi|68129809|emb|CAJ09115.1| putative universal minicircle sequence binding protein [Leishmania
major strain Friedlin]
Length = 115
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 13/93 (13%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK-------AQDCFI 227
P ++CYNCGE GHM+ +C S ++ K C+ CGS +H R+C+ + C+
Sbjct: 20 PRAAATRSCYNCGETGHMSRDCPSE-RKPKSCYNCGSTDHLSRECTNEAKAGADTRSCYN 78
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
C GH ++DCP++ K + C CG + H
Sbjct: 79 CGGTGHLSRDCPNERK-----PKSCYNCGSTDH 106
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 12/111 (10%)
Query: 182 TCYNCGEEGHMAVNC-RSAVKRKKPCFVCGSLEHGVRQCS---KAQDCFICKKGGHRAKD 237
TCY CGE GHM+ +C R+A R C+ CG H R C K + C+ C H +++
Sbjct: 5 TCYKCGEAGHMSRSCPRAAATRS--CYNCGETGHMSRDCPSERKPKSCYNCGSTDHLSRE 62
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C ++ K+G + + C CG +GH C N + K CY C HL
Sbjct: 63 CTNEAKAG-ADTRSCYNCGGTGHLSRDCPN-----ERKPKSCYNCGSTDHL 107
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKR---KKPCFVCGSLEHGVRQCS---KAQDCFIC 228
P +R ++CYNCG H++ C + K + C+ CG H R C K + C+ C
Sbjct: 42 PSERKPKSCYNCGSTDHLSRECTNEAKAGADTRSCYNCGGTGHLSRDCPNERKPKSCYNC 101
Query: 229 KKGGHRAKDCPDKH 242
H +++CPD+H
Sbjct: 102 GSTDHLSRECPDRH 115
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 21/87 (24%)
Query: 274 LKEVQCYICRCFGHLCCVNISDAVP---GEVSCFRCGQLGHTGLHWNSCMQACARSRGET 330
+ V CY C GH+ S + P SC+ CG+ GH SR
Sbjct: 1 MSAVTCYKCGEAGHM-----SRSCPRAAATRSCYNCGETGHM-------------SRDCP 42
Query: 331 VEASPSSCYNCGAEGHFARECVSSSKV 357
E P SCYNCG+ H +REC + +K
Sbjct: 43 SERKPKSCYNCGSTDHLSRECTNEAKA 69
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 22/115 (19%)
Query: 247 QNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGE---VSC 303
+A C KCG++GH SC + + CY C GH+ S P E SC
Sbjct: 1 MSAVTCYKCGEAGHMSRSCPRAAATR-----SCYNCGETGHM-----SRDCPSERKPKSC 50
Query: 304 FRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVR 358
+ CG H + +A A +R SCYNCG GH +R+C + K +
Sbjct: 51 YNCGSTDHLSRECTNEAKAGADTR---------SCYNCGGTGHLSRDCPNERKPK 96
>gi|189195318|ref|XP_001933997.1| cellular nucleic acid binding protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979876|gb|EDU46502.1| cellular nucleic acid binding protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 189
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 73/175 (41%), Gaps = 50/175 (28%)
Query: 171 RYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK--------- 221
R + P +G TCYNCGE+GH++ C S + +K C+ CG H R+C+K
Sbjct: 24 RAAECPTKGTPTCYNCGEKGHVSRECTSP-QAEKTCYRCGGTGHISRECTKDGGAPMGGR 82
Query: 222 ---AQDCFICKKGGHRAKDCPDKHKSGFQNAQ------------------VCLKCGDSGH 260
+Q+C+ C + GH A++C G+ C CG GH
Sbjct: 83 GGGSQECYKCGQVGHIARNC--SQGGGYSAGSRGGYGGGAAGGYGGARQTTCYSCGGFGH 140
Query: 261 DMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVS----CFRCGQLGH 311
S D + +CY C GHL S P E S C+RC Q GH
Sbjct: 141 --------MSRDCTQGQKCYNCGEVGHL-----SRDCPQETSSERVCYRCKQPGH 182
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 24/107 (22%)
Query: 181 QTCYNCGEEGHMAVNCRSA--------------------VKRKKPCFVCGSLEHGVRQCS 220
Q CY CG+ GH+A NC R+ C+ CG H R C+
Sbjct: 87 QECYKCGQVGHIARNCSQGGGYSAGSRGGYGGGAAGGYGGARQTTCYSCGGFGHMSRDCT 146
Query: 221 KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
+ Q C+ C + GH ++DCP + S +VC +C GH +C N
Sbjct: 147 QGQKCYNCGEVGHLSRDCPQETSS----ERVCYRCKQPGHVQSACTN 189
>gi|146104178|ref|XP_001469751.1| universal minicircle sequence binding protein [Leishmania infantum
JPCM5]
gi|134074121|emb|CAM72863.1| universal minicircle sequence binding protein [Leishmania infantum
JPCM5]
Length = 115
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK-------AQDCFICKKGGH 233
++CYNCGE GHM+ +C S ++ K C+ CGS +H R+C+ + C+ C GH
Sbjct: 26 RSCYNCGETGHMSRDCPSE-RKPKSCYNCGSTDHLSRECTNEAKAGADTRSCYNCGGTGH 84
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGH 260
++DCP++ K + C CG + H
Sbjct: 85 MSRDCPNERK-----PKSCYNCGSTDH 106
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 12/111 (10%)
Query: 182 TCYNCGEEGHMAVNC-RSAVKRKKPCFVCGSLEHGVRQCS---KAQDCFICKKGGHRAKD 237
TCY CGE GHM+ +C R+AV R C+ CG H R C K + C+ C H +++
Sbjct: 5 TCYKCGEAGHMSRSCPRAAVTRS--CYNCGETGHMSRDCPSERKPKSCYNCGSTDHLSRE 62
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C ++ K+G + + C CG +GH C N + K CY C HL
Sbjct: 63 CTNEAKAG-ADTRSCYNCGGTGHMSRDCPN-----ERKPKSCYNCGSTDHL 107
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKR---KKPCFVCGSLEHGVRQCS---KAQDCFIC 228
P +R ++CYNCG H++ C + K + C+ CG H R C K + C+ C
Sbjct: 42 PSERKPKSCYNCGSTDHLSRECTNEAKAGADTRSCYNCGGTGHMSRDCPNERKPKSCYNC 101
Query: 229 KKGGHRAKDCPDKH 242
H +++CPD+H
Sbjct: 102 GSTDHLSRECPDRH 115
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 21/87 (24%)
Query: 274 LKEVQCYICRCFGHLCCVNISDAVPGEV---SCFRCGQLGHTGLHWNSCMQACARSRGET 330
+ + CY C GH+ S + P SC+ CG+ GH SR
Sbjct: 1 MSAITCYKCGEAGHM-----SRSCPRAAVTRSCYNCGETGHM-------------SRDCP 42
Query: 331 VEASPSSCYNCGAEGHFARECVSSSKV 357
E P SCYNCG+ H +REC + +K
Sbjct: 43 SERKPKSCYNCGSTDHLSRECTNEAKA 69
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 49/115 (42%), Gaps = 22/115 (19%)
Query: 247 QNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGE---VSC 303
+A C KCG++GH SC + CY C GH+ S P E SC
Sbjct: 1 MSAITCYKCGEAGHMSRSCPRA-----AVTRSCYNCGETGHM-----SRDCPSERKPKSC 50
Query: 304 FRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVR 358
+ CG H + +A A +R SCYNCG GH +R+C + K +
Sbjct: 51 YNCGSTDHLSRECTNEAKAGADTR---------SCYNCGGTGHMSRDCPNERKPK 96
>gi|339245201|ref|XP_003378526.1| zinc finger CCHC domain-containing protein 9 [Trichinella spiralis]
gi|316972556|gb|EFV56229.1| zinc finger CCHC domain-containing protein 9 [Trichinella spiralis]
Length = 275
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 182 TCYNCGEEGHMAVNCR--SAVKRKKPCFVCGSLEHGVRQC-SKAQD-----CFICKKGGH 233
CY C ++GH NC + ++ CF CGSLEH ++ C SKA CF+C GH
Sbjct: 112 VCYCCRKKGHTLANCERNNDTQKLGVCFKCGSLEHTLKNCKSKANGLPYAFCFVCNGHGH 171
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
AK C + + N C KCG H + C
Sbjct: 172 LAKSCKENPNGIYPNGGSCKKCGSIYHLVKDC 203
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
C+ C+K GH +C + + Q VC KCG H + +C++ + L C++C
Sbjct: 113 CYCCRKKGHTLANCERNNDT--QKLGVCFKCGSLEHTLKNCKS--KANGLPYAFCFVCNG 168
Query: 285 FGHL---CCVNISDAVPGEVSCFRCGQLGH 311
GHL C N + P SC +CG + H
Sbjct: 169 HGHLAKSCKENPNGIYPNGGSCKKCGSIYH 198
>gi|344301675|gb|EGW31980.1| zinc-finger protein GIS2 [Spathaspora passalidarum NRRL Y-27907]
Length = 173
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 64/172 (37%), Gaps = 55/172 (31%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
+TCY CGE GH+A NC+ + C+ C K GH + DCPD
Sbjct: 7 RTCYKCGEVGHLADNCQQEERL----------------------CYNCHKPGHESTDCPD 44
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGE 300
+ + C CGD GH C N
Sbjct: 45 PKQP---TTKQCYSCGDVGHVQSECPNQAQ-----------------------------G 72
Query: 301 VSCFRCGQLGHTGLHWNSCMQACARSRG-ETVEASPSSCYNCGAEGHFAREC 351
C+ CGQ GH + +S AR + T A+ ++CY CG HFAR+C
Sbjct: 73 TKCYNCGQFGHISKNCDSEQVGGARKKFYPTKSAAGTTCYKCGGPNHFARDC 124
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 43/92 (46%), Gaps = 14/92 (15%)
Query: 183 CYNCGEEGHMAVNCRS-----AVKRKKP--------CFVCGSLEHGVRQC-SKAQDCFIC 228
CYNCG+ GH++ NC S A K+ P C+ CG H R C + C+ C
Sbjct: 75 CYNCGQFGHISKNCDSEQVGGARKKFYPTKSAAGTTCYKCGGPNHFARDCQAGVVKCYAC 134
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
K GH +KDC ++ C CG SGH
Sbjct: 135 GKTGHISKDCTSSSGGSNYGSKTCYNCGKSGH 166
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 62/180 (34%), Gaps = 50/180 (27%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
DP + CY+CG+ GH+ C + + K C+ CG H + C Q GG
Sbjct: 44 DPKQPTTKQCYSCGDVGHVQSECPNQAQGTK-CYNCGQFGHISKNCDSEQ------VGGA 96
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNI 293
R K P K +G C KCG H C+
Sbjct: 97 RKKFYPTKSAAG----TTCYKCGGPNHFARDCQ--------------------------- 125
Query: 294 SDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVS 353
G V C+ CG+ GH S +CYNCG GH ++EC +
Sbjct: 126 ----AGVVKCYACGKTGHISKDCT--------SSSGGSNYGSKTCYNCGKSGHISKECTA 173
>gi|169617029|ref|XP_001801929.1| hypothetical protein SNOG_11691 [Phaeosphaeria nodorum SN15]
gi|111059615|gb|EAT80735.1| hypothetical protein SNOG_11691 [Phaeosphaeria nodorum SN15]
Length = 489
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 58/158 (36%), Gaps = 29/158 (18%)
Query: 200 VKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDC---PDK---HKSGFQNAQVCL 253
++R CF C H R C CF C GH ++DC PD+ K Q A+VC
Sbjct: 293 LERVIICFNCREAHHIARDCLAKPVCFNCSVAGHASRDCTEGPDELCVSKKQAQAARVCY 352
Query: 254 KCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTG 313
C + GH C + D + S QL G
Sbjct: 353 NCNEKGHIAKDCTAHHK-----------------------GDGPEDQASAVHSLQLPWKG 389
Query: 314 LHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
H +A ++ E +P CYNC EGH AR+C
Sbjct: 390 GHIARNCKAETKTPSTNNERAPPVCYNCTEEGHLARDC 427
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 14/89 (15%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
+ CYNC E+GH+A +C + K P Q S + KGGH A++C
Sbjct: 349 RVCYNCNEKGHIAKDCTAHHKGDGP----------EDQASAVHSLQLPWKGGHIARNCKA 398
Query: 241 KHKSGFQNAQ----VCLKCGDSGHDMFSC 265
+ K+ N + VC C + GH C
Sbjct: 399 ETKTPSTNNERAPPVCYNCTEEGHLARDC 427
>gi|295658168|ref|XP_002789646.1| DNA-binding protein HEXBP [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283131|gb|EEH38697.1| DNA-binding protein HEXBP [Paracoccidioides sp. 'lutzii' Pb01]
Length = 190
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 22/105 (20%)
Query: 181 QTCYNCGEEGHMAVNC------------------RSAVKRKKPCFVCGSLEHGVRQCSKA 222
Q CY CG+ GH+A NC R++ C+ CG H R C++
Sbjct: 90 QECYKCGQVGHIARNCSQGYSSGGYGSGAGGYGGGYGGNRQQTCYSCGGFGHMARDCTQG 149
Query: 223 QDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
Q C+ C + GH ++DCP + K +VC KC GH +C N
Sbjct: 150 QKCYNCGEVGHVSRDCPTEVK----GERVCYKCKQPGHVQAACPN 190
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 73/173 (42%), Gaps = 44/173 (25%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA----------- 222
D P +G TCYNCG +GH++ C +A ++K C+ CG H R C+ A
Sbjct: 22 DCPKKGTPTCYNCGGQGHVSREC-TAAPKEKTCYRCGQGGHISRDCTSAGSGDSYTPSGG 80
Query: 223 ---------QDCFICKKGGHRAKDCPDKHKSGFQNA--------------QVCLKCGDSG 259
Q+C+ C + GH A++C + SG + Q C CG G
Sbjct: 81 YSGGGGASSQECYKCGQVGHIARNCSQGYSSGGYGSGAGGYGGGYGGNRQQTCYSCGGFG 140
Query: 260 HDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHT 312
H + D + +CY C GH+ + V GE C++C Q GH
Sbjct: 141 H--------MARDCTQGQKCYNCGEVGHV-SRDCPTEVKGERVCYKCKQPGHV 184
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 81/203 (39%), Gaps = 50/203 (24%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVKRKKP-CFVCGSLEHGVRQCSKA---QDCFICKKGGHR 234
G + C+NCG+ H A R K+ P C+ CG H R+C+ A + C+ C +GGH
Sbjct: 6 GGRGCFNCGDASHQA---RDCPKKGTPTCYNCGGQGHVSRECTAAPKEKTCYRCGQGGHI 62
Query: 235 AKDCPD------------KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDL-------- 274
++DC G ++Q C KCG GH +C YS
Sbjct: 63 SRDCTSAGSGDSYTPSGGYSGGGGASSQECYKCGQVGHIARNCSQGYSSGGYGSGAGGYG 122
Query: 275 ------KEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRG 328
++ CY C FGH+ D G+ C+ CG++GH + +G
Sbjct: 123 GGYGGNRQQTCYSCGGFGHM----ARDCTQGQ-KCYNCGEVGHVSRDCPT------EVKG 171
Query: 329 ETVEASPSSCYNCGAEGHFAREC 351
E V CY C GH C
Sbjct: 172 ERV------CYKCKQPGHVQAAC 188
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 57/163 (34%), Gaps = 31/163 (19%)
Query: 206 CFVCGSLEHGVRQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMF 263
CF CG H R C K C+ C GH +++C K + C +CG GH
Sbjct: 10 CFNCGDASHQARDCPKKGTPTCYNCGGQGHVSRECTAAPKE-----KTCYRCGQGGHISR 64
Query: 264 SCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQAC 323
C ++ S D C++CGQ+GH +C Q
Sbjct: 65 DCTSAGSGDSYTPSG------------GYSGGGGASSQECYKCGQVGHI---ARNCSQGY 109
Query: 324 ARSRGETVEASPS---------SCYNCGAEGHFARECVSSSKV 357
+ + +CY+CG GH AR+C K
Sbjct: 110 SSGGYGSGAGGYGGGYGGNRQQTCYSCGGFGHMARDCTQGQKC 152
>gi|225684876|gb|EEH23160.1| cellular nucleic acid-binding protein [Paracoccidioides
brasiliensis Pb03]
gi|226287748|gb|EEH43261.1| DNA-binding protein HEXBP [Paracoccidioides brasiliensis Pb18]
Length = 190
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 22/105 (20%)
Query: 181 QTCYNCGEEGHMAVNC------------------RSAVKRKKPCFVCGSLEHGVRQCSKA 222
Q CY CG+ GH+A NC R++ C+ CG H R C++
Sbjct: 90 QECYKCGQVGHIARNCSQGYGSGGYGGGAGGYGGGYGGNRQQTCYSCGGFGHMARDCTQG 149
Query: 223 QDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
Q C+ C + GH ++DCP + K +VC KC GH +C N
Sbjct: 150 QKCYNCGEVGHVSRDCPTEVK----GERVCYKCKQPGHVQAACPN 190
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 72/173 (41%), Gaps = 44/173 (25%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA----------- 222
D P +G TCYNCG +GH++ C +A ++K C+ CG H R C+ A
Sbjct: 22 DCPKKGTPTCYNCGGQGHVSREC-TAAPKEKTCYRCGQGGHISRDCTSAGSGDSYTPSGG 80
Query: 223 ---------QDCFICKKGGHRAKDCPDKHKSGFQNA--------------QVCLKCGDSG 259
Q+C+ C + GH A++C + SG Q C CG G
Sbjct: 81 YSGGGGASSQECYKCGQVGHIARNCSQGYGSGGYGGGAGGYGGGYGGNRQQTCYSCGGFG 140
Query: 260 HDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHT 312
H + D + +CY C GH+ + V GE C++C Q GH
Sbjct: 141 H--------MARDCTQGQKCYNCGEVGHV-SRDCPTEVKGERVCYKCKQPGHV 184
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 80/203 (39%), Gaps = 50/203 (24%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVKRKKP-CFVCGSLEHGVRQCSKA---QDCFICKKGGHR 234
G + C+NCG+ H A R K+ P C+ CG H R+C+ A + C+ C +GGH
Sbjct: 6 GGRGCFNCGDASHQA---RDCPKKGTPTCYNCGGQGHVSRECTAAPKEKTCYRCGQGGHI 62
Query: 235 AKDCPD------------KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDL-------- 274
++DC G ++Q C KCG GH +C Y
Sbjct: 63 SRDCTSAGSGDSYTPSGGYSGGGGASSQECYKCGQVGHIARNCSQGYGSGGYGGGAGGYG 122
Query: 275 ------KEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRG 328
++ CY C FGH+ D G+ C+ CG++GH + +G
Sbjct: 123 GGYGGNRQQTCYSCGGFGHM----ARDCTQGQ-KCYNCGEVGHVSRDCPT------EVKG 171
Query: 329 ETVEASPSSCYNCGAEGHFAREC 351
E V CY C GH C
Sbjct: 172 ERV------CYKCKQPGHVQAAC 188
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 55/163 (33%), Gaps = 31/163 (19%)
Query: 206 CFVCGSLEHGVRQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMF 263
CF CG H R C K C+ C GH +++C K + C +CG GH
Sbjct: 10 CFNCGDASHQARDCPKKGTPTCYNCGGQGHVSRECTAAPKE-----KTCYRCGQGGHISR 64
Query: 264 SCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQAC 323
C ++ S D C++CGQ+GH +C Q
Sbjct: 65 DCTSAGSGDSYTPSG------------GYSGGGGASSQECYKCGQVGHI---ARNCSQGY 109
Query: 324 ARSRGETVEASPS---------SCYNCGAEGHFARECVSSSKV 357
+CY+CG GH AR+C K
Sbjct: 110 GSGGYGGGAGGYGGGYGGNRQQTCYSCGGFGHMARDCTQGQKC 152
>gi|310796854|gb|EFQ32315.1| zinc knuckle [Glomerella graminicola M1.001]
Length = 182
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 65/166 (39%), Gaps = 37/166 (22%)
Query: 176 PDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK-----------AQD 224
P+RG CYNCG EGHM+ +C K K C+ CG H R C + + +
Sbjct: 18 PNRGAAKCYNCGNEGHMSRDCPEGPKDTKSCYRCGQAGHISRDCPQGGNVGGGGGPSSSE 77
Query: 225 CFICKKGGHRAKDCPDKHKSGFQ------------------NAQVCLKCGDSGHDMFSCR 266
C+ C + GH A++CP + + C CG GH C
Sbjct: 78 CYKCGEVGHVARNCPKSGGGYGGGQGGYGGGYGGGGGYGGASQKTCYSCGGYGHMSRDCT 137
Query: 267 NSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHT 312
N +CY C GH ++ GE C++C Q GH
Sbjct: 138 NG--------SKCYNCGENGHFSRDCPKESSGGEKICYKCQQPGHV 175
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 43/107 (40%), Gaps = 25/107 (23%)
Query: 183 CYNCGEEGHMAVNC----------------------RSAVKRKKPCFVCGSLEHGVRQCS 220
CY CGE GH+A NC +K C+ CG H R C+
Sbjct: 78 CYKCGEVGHVARNCPKSGGGYGGGQGGYGGGYGGGGGYGGASQKTCYSCGGYGHMSRDCT 137
Query: 221 KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
C+ C + GH ++DCP + G ++C KC GH C N
Sbjct: 138 NGSKCYNCGENGHFSRDCPKESSGG---EKICYKCQQPGHVQSQCPN 181
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 66/169 (39%), Gaps = 51/169 (30%)
Query: 208 VCGSLEHGVRQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
VCG+ H R+C A C+ C GH ++DCP+ G ++ + C +CG +GH C
Sbjct: 6 VCGAAGHQARECPNRGAAKCYNCGNEGHMSRDCPE----GPKDTKSCYRCGQAGHISRDC 61
Query: 266 RNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACAR 325
++ P C++CG++GH + C +
Sbjct: 62 PQGGNVG---------------------GGGGPSSSECYKCGEVGHV-------ARNCPK 93
Query: 326 SRGETVE-----------------ASPSSCYNCGAEGHFARECVSSSKV 357
S G AS +CY+CG GH +R+C + SK
Sbjct: 94 SGGGYGGGQGGYGGGYGGGGGYGGASQKTCYSCGGYGHMSRDCTNGSKC 142
>gi|213403956|ref|XP_002172750.1| zf-CCHC type zinc finger protein [Schizosaccharomyces japonicus
yFS275]
gi|212000797|gb|EEB06457.1| zf-CCHC type zinc finger protein [Schizosaccharomyces japonicus
yFS275]
Length = 215
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA-----QDCFICKKGGHRAKD 237
C+ C ++GH+ +C + K CF CGS EH + C+K CFICK GH A
Sbjct: 75 CFGCRKQGHILQDCPESGNSKAICFRCGSTEHTLSSCAKKGPLEFATCFICKAKGHLASK 134
Query: 238 CPDKHKSGFQNAQVCLKCGDSGH 260
CPD K + C C H
Sbjct: 135 CPDNPKGLYPRGGGCKLCSSVHH 157
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 10/90 (11%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
CF C+K GH +DCP+ S +C +CG + H + SC L+ C+IC+
Sbjct: 75 CFGCRKQGHILQDCPESGNS----KAICFRCGSTEHTLSSCAKK---GPLEFATCFICKA 127
Query: 285 FGHL---CCVNISDAVPGEVSCFRCGQLGH 311
GHL C N P C C + H
Sbjct: 128 KGHLASKCPDNPKGLYPRGGGCKLCSSVHH 157
>gi|443926876|gb|ELU45430.1| zf-CCHC domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 523
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 60/154 (38%), Gaps = 31/154 (20%)
Query: 220 SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQC 279
S+ + C+ C++ GH + +CP + A+ C CG GH C N+
Sbjct: 371 SEMRLCYNCRQPGHESVNCPSPRST---QAKQCYMCGGVGHIQVDCPNNLRPSGGGGSVG 427
Query: 280 YICRCFGHLCCVNISDA----------------------VPGEVSCFRCGQLGHTGLHWN 317
+C+GH+ V S A V V CFRC H +
Sbjct: 428 PGQKCYGHIARVCPSAAGGLAGNSAAGGGFRGGSGRGAGVNATVKCFRCQGPNH---YAR 484
Query: 318 SCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
CM A T+++ P +CY C EGH AR C
Sbjct: 485 DCMAAPGTI---TLDSKPKTCYKCHKEGHIARAC 515
>gi|263173451|gb|ACY69944.1| E3 ubiquitin ligase [Cimex lectularius]
Length = 143
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 63/150 (42%), Gaps = 33/150 (22%)
Query: 225 CFICKKGGHRAKDCP---DKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQ--C 279
C+ C + GH A+DCP D+ + GF++ + C KC GH D KE Q C
Sbjct: 6 CYRCNRSGHYARDCPQSGDRERGGFRSKEKCYKCNRFGH---------FARDCKEDQDRC 56
Query: 280 YICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRG----------- 328
Y C GH+ P E SC+ C + GH C + SRG
Sbjct: 57 YRCNGVGHI--ARECQQNPDEPSCYTCNKTGHMAR---DCPEQRENSRGGGACYTCNKQG 111
Query: 329 ---ETVEASPSSCYNCGAEGHFARECVSSS 355
S SCY+CG GH +REC +S
Sbjct: 112 HVARDCPESVRSCYSCGKAGHISRECNKNS 141
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 50/114 (43%), Gaps = 14/114 (12%)
Query: 178 RGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD---CFICKKGGHR 234
R + CY C GH A +C+ R C+ C + H R+C + D C+ C K GH
Sbjct: 31 RSKEKCYKCNRFGHFARDCKEDQDR---CYRCNGVGHIARECQQNPDEPSCYTCNKTGHM 87
Query: 235 AKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
A+DCP++ ++ + C C GH C S CY C GH+
Sbjct: 88 ARDCPEQRENS-RGGGACYTCNKQGHVARDCPESVR-------SCYSCGKAGHI 133
>gi|294943015|ref|XP_002783737.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239896385|gb|EER15533.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 110
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 17/91 (18%)
Query: 181 QTCYNCGEEGHMAVNC-------RSAVKRKKPCFVCGSLEHGVRQCSKAQD----CFICK 229
Q C+ C E GH A NC A +R + C+ CG +H R C K Q CF C+
Sbjct: 8 QACFICNETGHYARNCPRQFDDDSRARRRPQNCYNCGQPDHLARDCPKDQSNDRPCFKCQ 67
Query: 230 KGGHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
+ GH A+DCP + + C +CG SGH
Sbjct: 68 QVGHFARDCPSA------DTRNCFRCGQSGH 92
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 170 PRYFDPPDRGW---QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA--QD 224
PR FD R Q CYNCG+ H+A +C +PCF C + H R C A ++
Sbjct: 24 PRQFDDDSRARRRPQNCYNCGQPDHLARDCPKDQSNDRPCFKCQQVGHFARDCPSADTRN 83
Query: 225 CFICKKGGHRAKDCP 239
CF C + GH A++CP
Sbjct: 84 CFRCGQSGHLARECP 98
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 12/98 (12%)
Query: 220 SKAQDCFICKKGGHRAKDCP---DKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKE 276
+ +Q CFIC + GH A++CP D + Q C CG H C D +
Sbjct: 5 APSQACFICNETGHYARNCPRQFDDDSRARRRPQNCYNCGQPDHLARDC----PKDQSND 60
Query: 277 VQCYICRCFGHLCCVNISDAVPGEV-SCFRCGQLGHTG 313
C+ C+ GH D + +CFRCGQ GH
Sbjct: 61 RPCFKCQQVGHF----ARDCPSADTRNCFRCGQSGHLA 94
>gi|296412703|ref|XP_002836061.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629863|emb|CAZ80218.1| unnamed protein product [Tuber melanosporum]
Length = 183
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 16/93 (17%)
Query: 183 CYNCGEEGHMAVNCRSAVK----------RKKPCFVCGSLEHGVRQCSKAQDCFICKKGG 232
CY CG+ GH+A C ++ R++ C+ CG H R C++ Q C+ C + G
Sbjct: 91 CYKCGKVGHIARQCTASGAGYGGPPGGGARQQTCYSCGGYGHLSRDCTQGQKCYNCGQIG 150
Query: 233 HRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
H ++DCP + +VC KC GH M SC
Sbjct: 151 HLSRDCPSEQD------RVCYKCKQPGHVMASC 177
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 65/150 (43%), Gaps = 27/150 (18%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKP-CFVCGSLEHGVRQCS---KAQDCFICKKGGHRAK 236
+ CYNCGE GH A R KR P C+ CG + R C+ K + C+ C + GH ++
Sbjct: 10 RACYNCGEGGHQA---RECPKRGTPVCYNCGRMFFPRRDCTGPAKEKSCYRCGQTGHLSR 66
Query: 237 DCPDKHK---------SGFQNAQVCLKCGDSGHDMFSCRNS------YSLDDLKEVQCYI 281
DC D + G C KCG GH C S ++ CY
Sbjct: 67 DCNDAPQQVGSFGGGSYGSGGGAECYKCGKVGHIARQCTASGAGYGGPPGGGARQQTCYS 126
Query: 282 CRCFGHLCCVNISDAVPGEVSCFRCGQLGH 311
C +GHL D G+ C+ CGQ+GH
Sbjct: 127 CGGYGHL----SRDCTQGQ-KCYNCGQIGH 151
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 59/150 (39%), Gaps = 29/150 (19%)
Query: 222 AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYI 281
A+ C+ C +GGH+A++CP + VC CG MF R KE CY
Sbjct: 9 ARACYNCGEGGHQARECPKR------GTPVCYNCGR----MFFPRRD-CTGPAKEKSCYR 57
Query: 282 CRCFGHLCCVNISDAVPGEVS--------------CFRCGQLGHTGLHWNSCMQACARSR 327
C GHL + P +V C++CG++GH +
Sbjct: 58 CGQTGHL--SRDCNDAPQQVGSFGGGSYGSGGGAECYKCGKVGHIARQCTA--SGAGYGG 113
Query: 328 GETVEASPSSCYNCGAEGHFARECVSSSKV 357
A +CY+CG GH +R+C K
Sbjct: 114 PPGGGARQQTCYSCGGYGHLSRDCTQGQKC 143
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 58/162 (35%), Gaps = 39/162 (24%)
Query: 176 PDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA------------- 222
P RG CYNCG +C K +K C+ CG H R C+ A
Sbjct: 26 PKRGTPVCYNCGRMFFPRRDCTGPAK-EKSCYRCGQTGHLSRDCNDAPQQVGSFGGGSYG 84
Query: 223 ----QDCFICKKGGHRAKDCPDKHKSGFQNA------QVCLKCGDSGHDMFSCRNSYSLD 272
+C+ C K GH A+ C Q C CG GH S D
Sbjct: 85 SGGGAECYKCGKVGHIARQCTASGAGYGGPPGGGARQQTCYSCGGYGH--------LSRD 136
Query: 273 DLKEVQCYICRCFGHLCCVNISDAVPGEVS--CFRCGQLGHT 312
+ +CY C GHL S P E C++C Q GH
Sbjct: 137 CTQGQKCYNCGQIGHL-----SRDCPSEQDRVCYKCKQPGHV 173
>gi|403343293|gb|EJY70972.1| Arginine methyltransferase-interacting protein, contains RING
Zn-finger [Oxytricha trifallax]
Length = 869
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 26/179 (14%)
Query: 120 KKEADKIEIEDQSVIVRKEEQKVETADNGDEGVTTVEISDNIVLRKLLRGPRYF---DPP 176
K++AD+ E++D+ + E+ VE D G+ + D+ + + RYF +P
Sbjct: 340 KQKADQ-ELQDE--LDLDEQNGVEQQD----GLLVEDDGDDAFQKMKNQTTRYFIENNPT 392
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAK 236
+ C NC E GH+A C + KR C +CG H C++ + CF C K GH A
Sbjct: 393 IK----CRNCLEYGHIARECTNKTKRPN-CILCGKDTHDSFSCNE-KSCFKCNKIGHLAS 446
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGHDMFSC----RNSYSLDDLKEVQCYICRCFGHLCCV 291
C ++ N C +C GH C + +Y+ + ++C C GHL C+
Sbjct: 447 QCTER------NVTRCNRCDLVGHKEARCLKVWKGNYNDSQMSLLRCIQCGSKGHLKCL 499
>gi|393215825|gb|EJD01316.1| hypothetical protein FOMMEDRAFT_147876 [Fomitiporia mediterranea
MF3/22]
Length = 591
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 58/142 (40%), Gaps = 15/142 (10%)
Query: 182 TCYNCGEEG-HMAVNCRSAVKRKKPCFVCGSL-EHGVRQCSKAQDCFICKKGGHRAKDCP 239
C CG EG H +C V C CG+ EH RQC + CF C GH KDCP
Sbjct: 209 VCGQCGAEGDHRQADCPVVV-----CLTCGAHNEHSTRQCPIVKTCFSCGMKGHINKDCP 263
Query: 240 DKHKSGFQNAQV--CLKCGDSGHDMFSCRNSYSLDDL-----KEVQCYICRCFGHLCCVN 292
+K S + C +CG H C + + D ++V + R +L
Sbjct: 264 NKFMSRQMTDRYYDCSRCGSILHKTRECPTLWRMYDYMDDTDRDVTLKMRREKENLPVGQ 323
Query: 293 ISDAVPGE-VSCFRCGQLGHTG 313
+ GE C+ CG GH G
Sbjct: 324 GGEGYIGEDYWCYNCGASGHLG 345
>gi|167380673|ref|XP_001735408.1| cellular nucleic acid binding protein [Entamoeba dispar SAW760]
gi|165902631|gb|EDR28401.1| cellular nucleic acid binding protein, putative [Entamoeba dispar
SAW760]
Length = 390
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ----DCFICKKGG 232
++G C+ CGE GH++ +C +A ++ CFVCG H R C KA+ CFIC + G
Sbjct: 287 NKGTDCCFICGEPGHISKDCPNAERK---CFVCGKTGHKSRDCPKAKGNNRPCFICGEIG 343
Query: 233 HRAKDCP 239
H +DCP
Sbjct: 344 HLDRDCP 350
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 183 CYNCGEEGHMAVNC-RSAVKRKKPCFVCGSLEHGVRQCSKAQ-DCFICKKGGHRAKDCPD 240
C CGE GH + C ++ K CF+CG H + C A+ CF+C K GH+++DCP
Sbjct: 269 CIICGEIGHTSKGCPQNENKGTDCCFICGEPGHISKDCPNAERKCFVCGKTGHKSRDCP- 327
Query: 241 KHKSGFQNAQVCLKCGDSGH 260
K K N + C CG+ GH
Sbjct: 328 KAKG---NNRPCFICGEIGH 344
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 16/88 (18%)
Query: 206 CFVCGSLEHGVRQCSKAQD-----CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
C +CG + H + C + ++ CFIC + GH +KDCP+ + C CG +GH
Sbjct: 269 CIICGEIGHTSKGCPQNENKGTDCCFICGEPGHISKDCPNAERK-------CFVCGKTGH 321
Query: 261 DMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C + + C+IC GHL
Sbjct: 322 KSRDCPKAKGNNR----PCFICGEIGHL 345
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 43/127 (33%), Gaps = 46/127 (36%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
C IC + GH +K CP G C CG+ GH C N+
Sbjct: 269 CIICGEIGHTSKGCPQNENKG---TDCCFICGEPGHISKDCPNA---------------- 309
Query: 285 FGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAE 344
E CF CG+ GH + C +++G C+ CG
Sbjct: 310 ---------------ERKCFVCGKTGHKS-------RDCPKAKGNN-----RPCFICGEI 342
Query: 345 GHFAREC 351
GH R+C
Sbjct: 343 GHLDRDC 349
>gi|154288428|ref|XP_001545009.1| hypothetical protein HCAG_02056 [Ajellomyces capsulatus NAm1]
gi|150408650|gb|EDN04191.1| hypothetical protein HCAG_02056 [Ajellomyces capsulatus NAm1]
Length = 191
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 25/108 (23%)
Query: 181 QTCYNCGEEGHMAVNC---------------------RSAVKRKKPCFVCGSLEHGVRQC 219
Q CY CG+ GH+A NC R++ C+ CG H R C
Sbjct: 88 QECYKCGQVGHIARNCSQSGGYGSGGYGGATGGGYSGGYGGGRQQTCYSCGGYGHMARDC 147
Query: 220 SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
++ Q C+ C + GH ++DCP + K +VC KC GH +C N
Sbjct: 148 TQGQKCYNCGEVGHVSRDCPTEAK----GERVCYKCKQPGHVQATCPN 191
>gi|406864044|gb|EKD17090.1| zinc knuckle protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 223
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 76/205 (37%), Gaps = 49/205 (23%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
+ CY CG GH A C SA ++ C+ C H C ++A+ C+ C+ GH
Sbjct: 7 RACYKCGNVGHYAEVCSSA---ERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQ 63
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSC-----------------------------R 266
DCP SG + C CG GH SC R
Sbjct: 64 ADCPTLRLSGAGTSGRCYNCGLPGHLARSCPAPAGPGPIPGVGRGLGAPRGGFGGGYAPR 123
Query: 267 NSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARS 326
+++ + CY C H D + C+ CG+LGH + C
Sbjct: 124 GAFA-GGPRPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI-------SRDCTAP 171
Query: 327 RGETVEASPSSCYNCGAEGHFAREC 351
G + + +CY CG GH +R+C
Sbjct: 172 NGGPLNTAGKTCYQCGEAGHISRDC 196
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 12/73 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK---------AQDCFICKKGG 232
TCY CG H A +C++ + C+ CG L H R C+ + C+ C + G
Sbjct: 134 TCYKCGGPNHFARDCQAQAMK---CYACGKLGHISRDCTAPNGGPLNTAGKTCYQCGEAG 190
Query: 233 HRAKDCPDKHKSG 245
H ++DCP K +G
Sbjct: 191 HISRDCPQKGANG 203
>gi|225710484|gb|ACO11088.1| DNA-binding protein HEXBP [Caligus rogercresseyi]
Length = 397
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDCPD 240
C+ CG+EGH + C +V CF CG + H R+C CF CK+ GH ++DCP+
Sbjct: 280 CFKCGKEGHFSRECTESVGGSN-CFKCGEVGHFSRECPTGGGDKCFNCKQEGHISRDCPE 338
Query: 241 KHKSGFQNAQVCLKCGDSGH 260
K C C ++GH
Sbjct: 339 KRNVS------CYNCNETGH 352
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD--CFICKKGGHRAK 236
G C+ CGE GH + C + K CF C H R C + ++ C+ C + GH ++
Sbjct: 298 GGSNCFKCGEVGHFSRECPTGGGDK--CFNCKQEGHISRDCPEKRNVSCYNCNETGHMSR 355
Query: 237 DCP 239
+CP
Sbjct: 356 ECP 358
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 37/102 (36%), Gaps = 26/102 (25%)
Query: 252 CLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVP--GEVSCFRCGQL 309
C KCG GH C S + C+ C GH S P G CF C Q
Sbjct: 280 CFKCGKEGHFSRECTESVGGSN-----CFKCGEVGHF-----SRECPTGGGDKCFNCKQE 329
Query: 310 GHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
GH + C R SCYNC GH +REC
Sbjct: 330 GHIS-------RDCPEKRN-------VSCYNCNETGHMSREC 357
>gi|340378247|ref|XP_003387639.1| PREDICTED: zinc finger CCHC domain-containing protein 9-like
[Amphimedon queenslandica]
Length = 201
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA--------QDCFICKKGG 232
+ C+ C + GH +C++ CF CGS EH V+ C CFIC + G
Sbjct: 71 KVCFKCRQPGHHLEDCKNNNDELNICFKCGSTEHSVKSCKAVVPSGSYPFAQCFICGESG 130
Query: 233 HRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYS 270
H ++ CPD + + N C CG H +C ++
Sbjct: 131 HLSRSCPDNPRGLYPNGGGCKVCGSVEHFKANCPEKFN 168
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
CF C++ GH +DC K+ +C KCG + H + SC+ QC+IC
Sbjct: 73 CFKCRQPGHHLEDC----KNNNDELNICFKCGSTEHSVKSCKAVVPSGSYPFAQCFICGE 128
Query: 285 FGHL---CCVNISDAVPGEVSCFRCGQLGH 311
GHL C N P C CG + H
Sbjct: 129 SGHLSRSCPDNPRGLYPNGGGCKVCGSVEH 158
>gi|407044490|gb|EKE42624.1| zinc finger protein, putative [Entamoeba nuttalli P19]
Length = 389
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ----DCFICKKGG 232
++G C+ CGE GH++ +C +A ++ CFVCG H R C KA+ CFIC + G
Sbjct: 287 NKGSDCCFICGETGHISKDCPNAERK---CFVCGKTGHKSRDCPKAKGNNRPCFICGEIG 343
Query: 233 HRAKDCP 239
H +DCP
Sbjct: 344 HLDRDCP 350
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
C IC + GH +KDCP G + C CG++GH C N+ E +C++C
Sbjct: 269 CIICGEIGHTSKDCPQNENKG---SDCCFICGETGHISKDCPNA-------ERKCFVCGK 318
Query: 285 FGHLCCVNISDAVPGEVSCFRCGQLGH 311
GH + A CF CG++GH
Sbjct: 319 TGHK-SRDCPKAKGNNRPCFICGEIGH 344
>gi|224137012|ref|XP_002322472.1| predicted protein [Populus trichocarpa]
gi|222869468|gb|EEF06599.1| predicted protein [Populus trichocarpa]
Length = 278
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 10/115 (8%)
Query: 206 CFVCGSLEHGVRQCS------KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSG 259
CF+C + +H + C K + C +C+ GH K CP K+ + ++C CG++G
Sbjct: 78 CFICKAKDHIAKLCPQKDEWEKNKICLLCRHRGHSLKRCPKKNDETM-DQKLCYNCGETG 136
Query: 260 HDMFSCRNSYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
H + C K C+IC GHL C N P C CG + H
Sbjct: 137 HSLSQCPQPREDGGTKFANCFICNERGHLSKDCPKNTRGIYPKGGCCKLCGGVTH 191
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 11/96 (11%)
Query: 181 QTCYNCGEEGHMAVNC---RSAVKRKKPCFVCGSLEHGVRQC--------SKAQDCFICK 229
+ C C GH C +K C+ CG H + QC +K +CFIC
Sbjct: 101 KICLLCRHRGHSLKRCPKKNDETMDQKLCYNCGETGHSLSQCPQPREDGGTKFANCFICN 160
Query: 230 KGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
+ GH +KDCP + + C CG H C
Sbjct: 161 ERGHLSKDCPKNTRGIYPKGGCCKLCGGVTHLARDC 196
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 39/134 (29%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC--RNSYSLDDLKEVQCYIC 282
CFICK H AK CP K + ++ ++CL C GH + C +N ++D
Sbjct: 78 CFICKAKDHIAKLCPQKDE--WEKNKICLLCRHRGHSLKRCPKKNDETMD---------- 125
Query: 283 RCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCG 342
+ C+ CG+ GH+ + C Q R G T A+ C+ C
Sbjct: 126 -----------------QKLCYNCGETGHS---LSQCPQP--REDGGTKFAN---CFICN 160
Query: 343 AEGHFARECVSSSK 356
GH +++C +++
Sbjct: 161 ERGHLSKDCPKNTR 174
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 12/77 (15%)
Query: 181 QTCYNCGEEGHMAVNCRSAVK----RKKPCFVCGSLEHGVRQCSKAQD--------CFIC 228
+ CYNCGE GH C + + CF+C H + C K C +C
Sbjct: 127 KLCYNCGETGHSLSQCPQPREDGGTKFANCFICNERGHLSKDCPKNTRGIYPKGGCCKLC 186
Query: 229 KKGGHRAKDCPDKHKSG 245
H A+DCPDK K G
Sbjct: 187 GGVTHLARDCPDKGKRG 203
>gi|148668646|gb|EDL00965.1| zinc finger, CCHC domain containing 9, isoform CRA_a [Mus musculus]
Length = 271
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 14/110 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C + ++ + C+ CGS EH + +C D CF+
Sbjct: 129 VCFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMSKCRANVDPALGEFPFAKCFV 188
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
C + GH ++ CPD K + + C CG GH CR + + D + V
Sbjct: 189 CGEMGHLSRSCPDNTKGVYADGGSCKLCGSVGHFKKDCRENQNSDRIITV 238
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 52/117 (44%), Gaps = 15/117 (12%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGH---LCCVNISDAV 297
K ++ +NA VC C GH + C D+ CY C H C N+ A+
Sbjct: 119 KRQAAKKNAMVCFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMSKCRANVDPAL 178
Query: 298 PGEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
GE CF CG++GH SC ++G V A SC CG+ GHF ++C
Sbjct: 179 -GEFPFAKCFVCGEMGHLS---RSCPD---NTKG--VYADGGSCKLCGSVGHFKKDC 226
>gi|340722932|ref|XP_003399853.1| PREDICTED: hypothetical protein LOC100652207 [Bombus terrestris]
Length = 463
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 216 VRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQ--VCLKCGDSGHDMFSCRNSYSLDD 273
+R+C CF C+K GH DCP+ G + A +C KCG + H F C+ + + +
Sbjct: 320 IRKCV----CFHCRKSGHNLSDCPE---LGSEQAGTGICFKCGSTEHTHFECKVAKPM-E 371
Query: 274 LKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+ C+ICR GH+ C N P +C CG + H
Sbjct: 372 FRYATCFICREQGHIAKQCPDNPKGIYPQGGACKICGDVTH 412
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKK---PCFVCGSLEHGVRQCSKAQ-------DCFICKKG 231
C++C + GH +C + CF CGS EH +C A+ CFIC++
Sbjct: 324 VCFHCRKSGHNLSDCPELGSEQAGTGICFKCGSTEHTHFECKVAKPMEFRYATCFICREQ 383
Query: 232 GHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
GH AK CPD K + C CGD H
Sbjct: 384 GHIAKQCPDNPKGIYPQGGACKICGDVTH 412
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 270 SLDDLKEVQCYICRCFGHLC--CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSR 327
+L +++ C+ CR GH C + G CF+CG HT H+ C A
Sbjct: 316 ALARIRKCVCFHCRKSGHNLSDCPELGSEQAGTGICFKCGSTEHT--HF-ECKVA----- 367
Query: 328 GETVEASPSSCYNCGAEGHFARECVSSSK 356
+ +E ++C+ C +GH A++C + K
Sbjct: 368 -KPMEFRYATCFICREQGHIAKQCPDNPK 395
>gi|300123580|emb|CBK24852.2| unnamed protein product [Blastocystis hominis]
Length = 335
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 123/335 (36%), Gaps = 59/335 (17%)
Query: 42 LKIVEKHMLMRAAKLDQDDSDSDVVLNDNTNTNTSDNSNNKNGGV---EAVVPGPSGTTD 98
+KI+ H ++D DDS + N + +N K E +P PS +D
Sbjct: 1 MKIIRSHT---PTEIDTDDSRAVTPRAPEQKENVPEKANTKEVVFLEEEKDLPSPSSHSD 57
Query: 99 DVIIEDVKSSDKKRIRVRKKKKKEADKIEIEDQSVIVRKEEQKVETADNGDEGVTTVE-- 156
S+++ + + ++ +E E+ E A + TT++
Sbjct: 58 ---------SEEEAVPLPPLSPQDTLTVEGENN-----------ENAPSAAANQTTLQFI 97
Query: 157 -----ISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGS 211
++D+ L RYF + +TC+ CG GH++ NC A CF C
Sbjct: 98 NTFTPLNDDNEFYDLEDAARYFSRQNE-TRTCHLCGNPGHLSRNCPLA-NTTNVCFFCAQ 155
Query: 212 LEHGVRQCSKA---QDCFI------CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDM 262
H R C + FI C K GH + C +K F C C H
Sbjct: 156 PTHNSRSCPLVVCRRSIFISPLMYRCHKPGHESNACSEKSIPPF-----CHYCSSRLHQP 210
Query: 263 FSC---RNSYSLDDLKEVQCYICRCFGHLCC---VNISDAVPGEVSCFRCGQLGHTGLHW 316
C + Y + + C C GHL C +S G C CG H+ +
Sbjct: 211 DDCPIIPHPYDKAVFQLMHCVCCGKQGHLVCKPQPALSKGYGGR--CAVCGSPNHSYVQC 268
Query: 317 NSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
S + R+ + + +C+ CG GHFA +C
Sbjct: 269 PS--RNSHRTAHTAAQENGGACFICGKMGHFASKC 301
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 38/88 (43%), Gaps = 16/88 (18%)
Query: 170 PRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKP--CFVCGSLEHGVRQC-------- 219
P +D C CG++GH+ + A+ + C VCGS H QC
Sbjct: 217 PHPYDKAVFQLMHCVCCGKQGHLVCKPQPALSKGYGGRCAVCGSPNHSYVQCPSRNSHRT 276
Query: 220 --SKAQD----CFICKKGGHRAKDCPDK 241
+ AQ+ CFIC K GH A CP K
Sbjct: 277 AHTAAQENGGACFICGKMGHFASKCPLK 304
>gi|395511351|ref|XP_003759923.1| PREDICTED: zinc finger CCHC domain-containing protein 9
[Sarcophilus harrisii]
Length = 262
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 14/114 (12%)
Query: 178 RGWQTCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD--------- 224
R Q CY+C + GH +C + ++ + C+ CGS EH + +C D
Sbjct: 116 RNSQVCYHCRKPGHGIADCPAVLESQDIGTGICYRCGSTEHEITKCKAKVDPAMGEFPFA 175
Query: 225 -CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
CFIC + GH ++ CPD K + C CG H C + + D++ V
Sbjct: 176 KCFICGEMGHLSRSCPDNPKGLYAEGGGCRLCGSVEHFKKDCPENQNSDNMVTV 229
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 222 AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLDDLKEVQC 279
+Q C+ C+K GH DCP +S +C +CG + H++ C+ ++ + +C
Sbjct: 118 SQVCYHCRKPGHGIADCPAVLESQDIGTGICYRCGSTEHEITKCKAKVDPAMGEFPFAKC 177
Query: 280 YICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+IC GHL C N C CG + H
Sbjct: 178 FICGEMGHLSRSCPDNPKGLYAEGGGCRLCGSVEH 212
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 13/110 (11%)
Query: 247 QNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVPGEV--- 301
+N+QVC C GH + C D+ CY C H C D GE
Sbjct: 116 RNSQVCYHCRKPGHGIADCPAVLESQDIGTGICYRCGSTEHEITKCKAKVDPAMGEFPFA 175
Query: 302 SCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
CF CG++GH ++C + + A C CG+ HF ++C
Sbjct: 176 KCFICGEMGHLS-------RSCP-DNPKGLYAEGGGCRLCGSVEHFKKDC 217
>gi|402224353|gb|EJU04416.1| hypothetical protein DACRYDRAFT_114745 [Dacryopinax sp. DJM-731
SS1]
Length = 356
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 17/109 (15%)
Query: 225 CFICKKGGHRAKDCPD---------KHKSGFQNAQVCLKCGDSGHDMFSCRN-SYSLDDL 274
CF C++ GH +DCPD +K + +C +CG + H + CR DL
Sbjct: 190 CFACRQPGHSVRDCPDISGSAAPSNTNKVALKGEALCYRCGSTQHTLGRCRKPELPSGDL 249
Query: 275 KEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGHTG----LHW 316
+C+IC GHL C N P +C CG++ H L W
Sbjct: 250 PFAKCFICGGTGHLAGQCGKNKHGVYPRGGNCKVCGEVTHLAKDCPLRW 298
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 23/112 (20%)
Query: 177 DRGWQT-CYNCGEEGHMAVNC-------------RSAVKRKKPCFVCGSLEHGVRQCSKA 222
DR QT C+ C + GH +C + A+K + C+ CGS +H + +C K
Sbjct: 183 DRQAQTICFACRQPGHSVRDCPDISGSAAPSNTNKVALKGEALCYRCGSTQHTLGRCRKP 242
Query: 223 Q---------DCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
+ CFIC GH A C + C CG+ H C
Sbjct: 243 ELPSGDLPFAKCFICGGTGHLAGQCGKNKHGVYPRGGNCKVCGEVTHLAKDC 294
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 38/90 (42%), Gaps = 19/90 (21%)
Query: 178 RGWQTCYNCGEEGHMAVNCRSAVKRKKP--------CFVCGSLEHGVRQCSKAQ------ 223
+G CY CG H CR K + P CF+CG H QC K +
Sbjct: 221 KGEALCYRCGSTQHTLGRCR---KPELPSGDLPFAKCFICGGTGHLAGQCGKNKHGVYPR 277
Query: 224 --DCFICKKGGHRAKDCPDKHKSGFQNAQV 251
+C +C + H AKDCP + K +A V
Sbjct: 278 GGNCKVCGEVTHLAKDCPLRWKDNQGDALV 307
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 19/92 (20%)
Query: 272 DDLKEVQCYICRCFGHLC--CVNISD----------AVPGEVSCFRCGQLGHTGLHWNSC 319
D + C+ CR GH C +IS A+ GE C+RCG HT
Sbjct: 183 DRQAQTICFACRQPGHSVRDCPDISGSAAPSNTNKVALKGEALCYRCGSTQHT------- 235
Query: 320 MQACARSRGETVEASPSSCYNCGAEGHFAREC 351
+ C + + + + C+ CG GH A +C
Sbjct: 236 LGRCRKPELPSGDLPFAKCFICGGTGHLAGQC 267
>gi|198401785|gb|ACH87542.1| Air1 domain containing protein [Platynereis dumerilii]
Length = 489
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 95/220 (43%), Gaps = 38/220 (17%)
Query: 68 NDNTNTNTSDNSNNKNGGVEAVVPGPSGT------TDDVIIEDVKSSDKKRIRVRK--KK 119
N +T+ N S + NK+ V+ V+P P+ T V + + + KRI++ K K
Sbjct: 244 NASTDKNFSPVAVNKS--VDGVLP-PAAEFQFIDGTLTVCLPEAIINGVKRIQLVKPFKS 300
Query: 120 KKEADKIEIEDQSVIVRKEEQKVETADNGDEGVTTVEISDNIVLRKLLRGPRYFDPPDRG 179
KKE + I V +N G+++ E+ PR + P
Sbjct: 301 KKEPESSPIPSP---VGSPHSAPTPFENLGSGISSSEVPK----------PRPWKP---- 343
Query: 180 WQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD----CFICKKGGHRA 235
+TC+ CG GH+A +C + +R CF C + H QCS + C C+ GH A
Sbjct: 344 -RTCFECGGAGHLAPHCPTRHQRSIHCFECEGVGHPAPQCSSRRHVSIICHQCRGRGHIA 402
Query: 236 KDC-----PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYS 270
K+C P H S +N +C + GH +C +S S
Sbjct: 403 KNCAFSCGPASHFSPRRNITRGYECWNYGHIARNCIDSTS 442
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 52/143 (36%), Gaps = 37/143 (25%)
Query: 221 KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCY 280
K + CF C GH A CP +H+ C +C GH C + + + C+
Sbjct: 342 KPRTCFECGGAGHLAPHCPTRHQRSIH----CFECEGVGHPAPQCSSRRHVS----IICH 393
Query: 281 ICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYN 340
CR GH+ + F CG H N +RG Y
Sbjct: 394 QCRGRGHI----------AKNCAFSCGPASHFSPRRNI-------TRG----------YE 426
Query: 341 CGAEGHFARECV--SSSKVRKRN 361
C GH AR C+ +SS VR N
Sbjct: 427 CWNYGHIARNCIDSTSSIVRASN 449
>gi|146416071|ref|XP_001484005.1| hypothetical protein PGUG_03386 [Meyerozyma guilliermondii ATCC
6260]
Length = 175
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 75/209 (35%), Gaps = 76/209 (36%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
+TCY CGE GH+A NC+ + C+ C+K GH + +CP+
Sbjct: 7 RTCYKCGEVGHLADNCQQTERL----------------------CYNCRKPGHESTECPE 44
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL------------ 288
+ + + C CGD GH C S + +CY C FGH+
Sbjct: 45 PKQP---SQKQCYSCGDLGHVQLDCPTS-----AQGAKCYNCGQFGHISKNCSEGGRPAA 96
Query: 289 ----------------CCVNIS-------DAVPGEVSCFRCGQLGHTGLHWNSCMQACAR 325
C D G + C+ CG+ GH N+
Sbjct: 97 ASTGSAPAPKFSKNGTTCYKCGGPNHFARDCQAGSLKCYACGKAGHISKDCNA------- 149
Query: 326 SRGETVEASPSSCYNCGAEGHFARECVSS 354
+A +CYNCG GH +R+C S
Sbjct: 150 ----GGDAGAKTCYNCGKAGHISRDCEES 174
>gi|67467476|ref|XP_649839.1| zinc finger protein [Entamoeba histolytica HM-1:IMSS]
gi|56466350|gb|EAL44453.1| zinc finger protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449701896|gb|EMD42631.1| zinc finger protein, putative [Entamoeba histolytica KU27]
Length = 389
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ----DCFICKKGG 232
++G C+ CGE GH++ +C +A ++ CFVCG H R C KA+ CFIC + G
Sbjct: 287 NKGSDCCFICGETGHISKDCPNAERK---CFVCGKTGHKSRDCPKAKGNNRPCFICGEIG 343
Query: 233 HRAKDCP 239
H +DCP
Sbjct: 344 HLDRDCP 350
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 183 CYNCGEEGHMAVNC-RSAVKRKKPCFVCGSLEHGVRQCSKAQ-DCFICKKGGHRAKDCPD 240
C CG+ GH + +C ++ K CF+CG H + C A+ CF+C K GH+++DCP
Sbjct: 269 CIICGKIGHTSKDCPQNENKGSDCCFICGETGHISKDCPNAERKCFVCGKTGHKSRDCP- 327
Query: 241 KHKSGFQNAQVCLKCGDSGH 260
K K N + C CG+ GH
Sbjct: 328 KAKG---NNRPCFICGEIGH 344
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 16/88 (18%)
Query: 206 CFVCGSLEHGVRQCSKAQD-----CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
C +CG + H + C + ++ CFIC + GH +KDCP+ + C CG +GH
Sbjct: 269 CIICGKIGHTSKDCPQNENKGSDCCFICGETGHISKDCPNAERK-------CFVCGKTGH 321
Query: 261 DMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C + + C+IC GHL
Sbjct: 322 KSRDCPKAKGNNR----PCFICGEIGHL 345
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
C IC K GH +KDCP G + C CG++GH C N+ E +C++C
Sbjct: 269 CIICGKIGHTSKDCPQNENKG---SDCCFICGETGHISKDCPNA-------ERKCFVCGK 318
Query: 285 FGHLCCVNISDAVPGEVSCFRCGQLGH 311
GH + A CF CG++GH
Sbjct: 319 TGHK-SRDCPKAKGNNRPCFICGEIGH 344
>gi|299929701|gb|ADJ58058.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++TV+ ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSTVQHANVMMQRGNFKGPRKIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|46137255|ref|XP_390319.1| hypothetical protein FG10143.1 [Gibberella zeae PH-1]
Length = 434
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 70/177 (39%), Gaps = 39/177 (22%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAK 236
DRG C NC E GH++ C + E R C+ C GHR +
Sbjct: 238 DRGLPLCSNCRELGHISKFC--------------TQEKMERTDGPKISCYNCGADGHRVR 283
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDA 296
DCP+ + C CG SGH + C + V+C C GH +
Sbjct: 284 DCPEPRV----DKNACKNCGKSGHKVVDCEEP---PNPANVECRKCSEVGHF-----AKD 331
Query: 297 VP--GEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
P G +C CGQ GH + C + R + S +C NC +GH+++EC
Sbjct: 332 CPQGGGRACRNCGQEGHMA-------KECDQPR----DMSTVTCRNCEQQGHYSKEC 377
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 54/141 (38%), Gaps = 24/141 (17%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ-----DCFICKKGGHRAK 236
+CYNCG +GH +C K C CG H V C + +C C + GH AK
Sbjct: 271 SCYNCGADGHRVRDCPEPRVDKNACKNCGKSGHKVVDCEEPPNPANVECRKCSEVGHFAK 330
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDA 296
DCP + C CG GH C D+ V C C GH S
Sbjct: 331 DCPQG------GGRACRNCGQEGHMAKECDQPR---DMSTVTCRNCEQQGHY-----SKE 376
Query: 297 VP-----GEVSCFRCGQLGHT 312
P +V C C + GHT
Sbjct: 377 CPLPRDWSKVQCSNCQEYGHT 397
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 292 NISDAVPG-EVSCFRCGQLGHTGLHWNSCMQACAR-------SRGETVEASPSSCYNCGA 343
++ D PG + CF CG++GH + + R R + EA P C NCG
Sbjct: 41 DLGDGQPGGDDKCFGCGEIGHRRAECPNPQEMACRYCKKEGHMRKDCPEAPPMVCENCGE 100
Query: 344 EGHFARECVSSSKVRKRNIDASTP 367
EGHF + C K+ + +I P
Sbjct: 101 EGHFRKHCEKPRKINRDHIANVHP 124
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
Query: 206 CFVCGSLEHGVRQCSKAQD--CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
CF CG + H +C Q+ C CKK GH KDCP+ VC CG+ GH
Sbjct: 53 CFGCGEIGHRRAECPNPQEMACRYCKKEGHMRKDCPEA------PPMVCENCGEEGH 103
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 12/99 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD-----CFIC 228
+PP+ C C E GH A +C R C CG H ++C + +D C C
Sbjct: 310 EPPNPANVECRKCSEVGHFAKDCPQGGGRA--CRNCGQEGHMAKECDQPRDMSTVTCRNC 367
Query: 229 KKGGHRAKDCP-DKHKSGFQNAQVCLKCGDSGHDMFSCR 266
++ GH +K+CP + S Q C C + GH C+
Sbjct: 368 EQQGHYSKECPLPRDWSKVQ----CSNCQEYGHTKVRCK 402
>gi|350403681|ref|XP_003486874.1| PREDICTED: hypothetical protein LOC100747634 [Bombus impatiens]
Length = 447
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 216 VRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQ--VCLKCGDSGHDMFSCRNSYSLDD 273
+R+C CF C+K GH DCP+ G + A +C KCG + H F C+ + + +
Sbjct: 320 IRKCV----CFHCRKSGHNLSDCPE---LGSEQAGTGICFKCGSTEHTHFECKVAKPM-E 371
Query: 274 LKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+ C+ICR GH+ C N P +C CG + H
Sbjct: 372 FRYATCFICREQGHIAKQCPDNPKGIYPQGGACKICGDVTH 412
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKK---PCFVCGSLEHGVRQCSKAQ-------DCFICKKG 231
C++C + GH +C + CF CGS EH +C A+ CFIC++
Sbjct: 324 VCFHCRKSGHNLSDCPELGSEQAGTGICFKCGSTEHTHFECKVAKPMEFRYATCFICREQ 383
Query: 232 GHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
GH AK CPD K + C CGD H
Sbjct: 384 GHIAKQCPDNPKGIYPQGGACKICGDVTH 412
>gi|255710801|ref|XP_002551684.1| KLTH0A05214p [Lachancea thermotolerans]
gi|238933061|emb|CAR21242.1| KLTH0A05214p [Lachancea thermotolerans CBS 6340]
Length = 396
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 71/178 (39%), Gaps = 32/178 (17%)
Query: 145 ADNGDEGVTTVEISDNIVLRKLLRGP-RYF---DPPDRGWQT---CYNCGEEGHMAVNCR 197
A G + E+ N + LRG RYF DP D C NC + GH+ NC
Sbjct: 49 ASEGILAPSIDEVDSNPEDLRYLRGKGRYFGVDDPSDPSLDAEPKCNNCSQRGHLKRNCP 108
Query: 198 SAVKRKKPCFVCGSLE-HGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCG 256
+ C CG ++ H +QC KA C C + GH CP + + + C +C
Sbjct: 109 HVI-----CAYCGIMDDHYTQQCPKAIKCANCGEEGHYRSQCPRQARRIY-----CTECN 158
Query: 257 DSGHDMFSCRN---SYSLDD--------LKEVQCYICRCFGHL---CCVNISDAVPGE 300
H C + SY L + ++ V CY C GH C + S VP E
Sbjct: 159 SKNHARERCPSIWRSYYLRERTFHRTLHIERVFCYNCGHQGHFGDDCSMRRSSKVPNE 216
>gi|431907878|gb|ELK11485.1| Zinc finger CCHC domain-containing protein 9 [Pteropus alecto]
Length = 271
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C +A++ + C+ CGS EH + +C D CF+
Sbjct: 129 VCFHCRQPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 188
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
C + GH ++ CPD K + + C CG H C S S D + V
Sbjct: 189 CGEMGHLSRACPDNPKGLYADGGSCRLCGSVEHFKKDCPQSQSSDRMVTV 238
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 49/119 (41%), Gaps = 13/119 (10%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVP 298
K ++ +NA VC C GH + C + D+ CY C H C D
Sbjct: 119 KRQAAKKNAMVCFHCRQPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPAL 178
Query: 299 GEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
GE CF CG++GH +AC + + A SC CG+ HF ++C S
Sbjct: 179 GEFPFAKCFVCGEMGHLS-------RACP-DNPKGLYADGGSCRLCGSVEHFKKDCPQS 229
>gi|332079154|gb|AEE00157.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 448
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 10/81 (12%)
Query: 150 EGVTTVEISDNIVL-RKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFV 208
E ++ V S NI++ R RGP+ + C+NCG+EGH+A NCR+ RKK C+
Sbjct: 365 EAMSQVTASANIMMQRGNFRGPKRIN-------KCFNCGKEGHLARNCRAP--RKKGCWK 415
Query: 209 CGSLEHGVRQCSKAQDCFICK 229
CG H ++ C++ Q F+ K
Sbjct: 416 CGKEGHQMKDCTERQANFLGK 436
>gi|327297590|ref|XP_003233489.1| zinc knuckle domain-containing protein [Trichophyton rubrum CBS
118892]
gi|326464795|gb|EGD90248.1| zinc knuckle domain-containing protein [Trichophyton rubrum CBS
118892]
Length = 190
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 25/108 (23%)
Query: 181 QTCYNCGEEGHMAVNC---------------------RSAVKRKKPCFVCGSLEHGVRQC 219
Q CY CG+ GH+A NC R + C+ CG H R C
Sbjct: 87 QECYKCGQVGHIARNCSQQGGSGYGGGYGNSGSGSYSGGYGGRSQTCYSCGGYGHMARGC 146
Query: 220 SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
++ Q C+ C + GH ++DCP + K +VC KC +GH +C N
Sbjct: 147 TQGQKCYNCGEVGHVSRDCPTEAK----GERVCYKCKQAGHVQAACPN 190
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 69/177 (38%), Gaps = 52/177 (29%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA----------- 222
D P +G TCYNCG +GH++ C K +K C+ CG H R+C +
Sbjct: 22 DCPKKGTPTCYNCGGQGHVSRECTQPPK-EKSCYRCGMTGHISRECPSSGSGDNNYSGGY 80
Query: 223 ------QDCFICKKGGHRAKDCPDKHKSGFQN-----------------AQVCLKCGDSG 259
Q+C+ C + GH A++C + SG+ +Q C CG G
Sbjct: 81 SGGSGGQECYKCGQVGHIARNCSQQGGSGYGGGYGNSGSGSYSGGYGGRSQTCYSCGGYG 140
Query: 260 HDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVP----GEVSCFRCGQLGHT 312
H C + EV GH +S P GE C++C Q GH
Sbjct: 141 HMARGCTQGQKCYNCGEV--------GH-----VSRDCPTEAKGERVCYKCKQAGHV 184
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 57/167 (34%), Gaps = 48/167 (28%)
Query: 220 SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQC 279
S + CF C + H+A+DCP K C CG GH C KE C
Sbjct: 5 SSGRGCFNCGESSHQARDCPKK------GTPTCYNCGGQGHVSREC-----TQPPKEKSC 53
Query: 280 YICRCFGHLCCVNISDAVPGEVS-----------------CFRCGQLGHTGLHWNSCMQA 322
Y C GH IS P S C++CGQ+GH +C Q
Sbjct: 54 YRCGMTGH-----ISRECPSSGSGDNNYSGGYSGGSGGQECYKCGQVGHI---ARNCSQQ 105
Query: 323 CARSRGETVEAS------------PSSCYNCGAEGHFARECVSSSKV 357
G S +CY+CG GH AR C K
Sbjct: 106 GGSGYGGGYGNSGSGSYSGGYGGRSQTCYSCGGYGHMARGCTQGQKC 152
>gi|119196333|ref|XP_001248770.1| hypothetical protein CIMG_02541 [Coccidioides immitis RS]
Length = 300
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 52/109 (47%), Gaps = 15/109 (13%)
Query: 166 LLRGPRYF-DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA-- 222
++R P D P +G CYNCG +C K +K C+ CG H R C +A
Sbjct: 144 MMRAPFVARDCPKKGSVICYNCGGR-----DCNEPAK-EKSCYRCGLTGHISRDCPQAGE 197
Query: 223 ------QDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
Q+C+ C + GH +++CP +SG Q C KCG GH +C
Sbjct: 198 SGGARGQECYKCGQVGHISRECPQGGESGEARGQECYKCGQVGHISRNC 246
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 50/116 (43%), Gaps = 15/116 (12%)
Query: 183 CYNCGEEGHMAVNCRSA-VKRKKP------CFVCGSLEHGVRQC---SKAQDCFICKKGG 232
C+ CG+ H R+ V R P C+ CG R C +K + C+ C G
Sbjct: 132 CFTCGDSAHQVNMMRAPFVARDCPKKGSVICYNCGG-----RDCNEPAKEKSCYRCGLTG 186
Query: 233 HRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
H ++DCP +SG Q C KCG GH C + + +CY C GH+
Sbjct: 187 HISRDCPQAGESGGARGQECYKCGQVGHISRECPQGGESGEARGQECYKCGQVGHI 242
>gi|326919350|ref|XP_003205944.1| PREDICTED: cellular nucleic acid-binding protein-like [Meleagris
gallopavo]
Length = 134
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 13/96 (13%)
Query: 168 RGPRYF--DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDC 225
RG +Y+ +P Q CYNCG+ GH+A +C A K+K C+ CG H + C+K + C
Sbjct: 38 RGGKYYCKEPKREREQCCYNCGKPGHLARDCDHADKQK--CYSCGEFGHIQKDCTKVK-C 94
Query: 226 FICKKGGHRAKDCPDKHKSGFQNAQV-CLKCGDSGH 260
+ C + GH A C + ++V C +CG SGH
Sbjct: 95 YRCGETGHVAISCS-------KTSEVNCYRCGKSGH 123
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 46/103 (44%), Gaps = 26/103 (25%)
Query: 250 QVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQL 309
Q C CG GH C D + +CY C FGH+ D +V C+RCG+
Sbjct: 53 QCCYNCGKPGHLARDC------DHADKQKCYSCGEFGHI----QKDCT--KVKCYRCGET 100
Query: 310 GHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECV 352
GH + +C+++ S +CY CG GH AREC
Sbjct: 101 GHVAI-------SCSKT-------SEVNCYRCGKSGHLARECT 129
>gi|448081812|ref|XP_004194980.1| Piso0_005509 [Millerozyma farinosa CBS 7064]
gi|359376402|emb|CCE86984.1| Piso0_005509 [Millerozyma farinosa CBS 7064]
Length = 179
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 74/186 (39%), Gaps = 37/186 (19%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA-----QDCFICKKGGHRAK 236
TCY CGE GH+A NC+ ++++ C+ C H C + + C+ C GH
Sbjct: 8 TCYKCGEVGHLADNCQ---QQQRLCYNCREPGHESNDCPQPKQASQKQCYSCGDLGHLQG 64
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDL-----------KEVQCYICRCF 285
DCP + + C CG GH C ++ K CY C
Sbjct: 65 DCPTQSQ-----GSKCYNCGQFGHISKQCTSASGQAAAAPKKANGARFSKAATCYKCGGP 119
Query: 286 GHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEG 345
H D G V C+ CG+ GH A + G+++ +CY CG G
Sbjct: 120 NHF----ARDCQAGLVKCYACGKTGHISKECP------AAASGDSLA---KACYQCGQVG 166
Query: 346 HFAREC 351
H ++EC
Sbjct: 167 HISKEC 172
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHR 234
P + CY+CG+ GH+ +C + + K C+ CG H +QC+ A +
Sbjct: 45 PKQASQKQCYSCGDLGHLQGDCPTQSQGSK-CYNCGQFGHISKQCTSASG---------Q 94
Query: 235 AKDCPDKHKSG-FQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNI 293
A P K F A C KCG H C+ V+CY C GH I
Sbjct: 95 AAAAPKKANGARFSKAATCYKCGGPNHFARDCQAGL-------VKCYACGKTGH-----I 142
Query: 294 SDAVPGEVS-------CFRCGQLGH 311
S P S C++CGQ+GH
Sbjct: 143 SKECPAAASGDSLAKACYQCGQVGH 167
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 32/111 (28%)
Query: 251 VCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVP-----GEVSCFR 305
C KCG+ GH +C+ L CY CR GH S+ P + C+
Sbjct: 8 TCYKCGEVGHLADNCQQQQRL-------CYNCREPGHE-----SNDCPQPKQASQKQCYS 55
Query: 306 CGQLGHTGLHWNSCMQACARSRGET-VEASPSSCYNCGAEGHFARECVSSS 355
CG LGH +G+ ++ S CYNCG GH +++C S+S
Sbjct: 56 CGDLGHL--------------QGDCPTQSQGSKCYNCGQFGHISKQCTSAS 92
>gi|259149113|emb|CAY82355.1| Gis2p [Saccharomyces cerevisiae EC1118]
gi|365763461|gb|EHN04989.1| Gis2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 153
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 10/130 (7%)
Query: 183 CYNCGEEGHMAVNCRSA-VKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
CYNC + GH+ +C K C+ CG + H +C+ Q CF C + GH +++CP+
Sbjct: 25 CYNCNKPGHVQTDCTMPRTVEFKQCYNCGEIGHVRSECT-VQRCFNCNQTGHISRECPEP 83
Query: 242 HKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEV 301
K+ + C KCG H C D + ++CY C GH+ S +
Sbjct: 84 KKTSRFSKVSCYKCGGPNHMAKDCMKE---DGISGLKCYTCGQAGHM-----SRDCQNDR 135
Query: 302 SCFRCGQLGH 311
C+ C + GH
Sbjct: 136 LCYNCNETGH 145
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 62/158 (39%), Gaps = 38/158 (24%)
Query: 203 KKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDM 262
+K C+VCG + H C + C+ C K GH DC F+ C CG+ GH
Sbjct: 3 QKACYVCGKIGHLAEDCDSERLCYNCNKPGHVQTDCTMPRTVEFKQ---CYNCGEIGHVR 59
Query: 263 FSCRNSYSLDDLKEVQ-CYICRCFGHLCCVNISDAVP--------GEVSCFRCGQLGHTG 313
C VQ C+ C GH IS P +VSC++CG H
Sbjct: 60 SEC----------TVQRCFNCNQTGH-----ISRECPEPKKTSRFSKVSCYKCGGPNHMA 104
Query: 314 LHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
+ C + G S CY CG GH +R+C
Sbjct: 105 -------KDCMKEDG----ISGLKCYTCGQAGHMSRDC 131
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 182 TCYNCGEEGHMAVNCR-----SAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAK 236
+CY CG HMA +C S +K C+ CG H R C + C+ C + GH +K
Sbjct: 93 SCYKCGGPNHMAKDCMKEDGISGLK----CYTCGQAGHMSRDCQNDRLCYNCNETGHISK 148
Query: 237 DCP 239
DCP
Sbjct: 149 DCP 151
>gi|170093301|ref|XP_001877872.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647731|gb|EDR11975.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 133
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 44/95 (46%), Gaps = 16/95 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAV------KRKKPCFVCGSLEHGVRQCSKAQD---------CF 226
TC+ C E+GH A NC A K C+ CGS H + +C K D CF
Sbjct: 17 TCFACREKGHAAKNCPKATTEDGKGKSVGICYRCGSTRHTLSRCKKPADTENPMPFASCF 76
Query: 227 ICKKGGHRAKDCP-DKHKSGFQNAQVCLKCGDSGH 260
+C GH A CP +K K + N C CGD+ H
Sbjct: 77 VCSGKGHLASACPQNKAKGVYPNGGCCKICGDTAH 111
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 225 CFICKKGGHRAKDCP--DKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDD-LKEVQCYI 281
CF C++ GH AK+CP ++ +C +CG + H + C+ ++ + C++
Sbjct: 18 CFACREKGHAAKNCPKATTEDGKGKSVGICYRCGSTRHTLSRCKKPADTENPMPFASCFV 77
Query: 282 CRCFGHL---CCVNISDAV-PGEVSCFRCGQLGH 311
C GHL C N + V P C CG H
Sbjct: 78 CSGKGHLASACPQNKAKGVYPNGGCCKICGDTAH 111
>gi|195997645|ref|XP_002108691.1| hypothetical protein TRIADDRAFT_51887 [Trichoplax adhaerens]
gi|190589467|gb|EDV29489.1| hypothetical protein TRIADDRAFT_51887 [Trichoplax adhaerens]
Length = 361
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 30/184 (16%)
Query: 147 NGDEGVTTVEISDNIVLRKLLRGPRYFDPPDRGW-QTCYNCGEEGHMAVNCRSAVKRKKP 205
N D+ + IS V+ + + RYF+ + + C+ C E GH++ C +K+K
Sbjct: 95 NSDDNDVVLPISK--VMGTIGKKFRYFNNTNHVINRKCHICLELGHLSYQC--PMKKKMT 150
Query: 206 CFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCP-----DKHKSGFQNAQVCLKCGDSGH 260
C +CG + H + C Q C+ C + GHR K+CP DK K+ C +C GH
Sbjct: 151 CRICGEIGHKLNSCPN-QFCYKCDQQGHRGKECPNGLAKDKRKT-------CRRCFMRGH 202
Query: 261 DMFSCRNSYSLDDLKEVQCYICRCFG--HLCCVNISDAVPGEVSCFRCGQLGHTGLHWNS 318
C + + Q Y FG + +A V C+ CG+ GH G +
Sbjct: 203 VEKECPDRWR-------QYYATTKFGPPKKPPDELLNAQNPRVYCYNCGKKGHYG---HE 252
Query: 319 CMQA 322
C++A
Sbjct: 253 CVEA 256
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 56/146 (38%), Gaps = 35/146 (23%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
C IC + GH + CP K K C CG+ GH + SC N + CY C
Sbjct: 130 CHICLELGHLSYQCPMKKK------MTCRICGEIGHKLNSCPNQF---------CYKCDQ 174
Query: 285 FGHLC--CVNISDAVPGEVSCFRCGQLGHTGLH----WNSCMQACARSRGETVEASPSS- 337
GH C N A +C RC GH W Q A ++ + P
Sbjct: 175 QGHRGKECPN-GLAKDKRKTCRRCFMRGHVEKECPDRWR---QYYATTKFGPPKKPPDEL 230
Query: 338 ---------CYNCGAEGHFARECVSS 354
CYNCG +GH+ ECV +
Sbjct: 231 LNAQNPRVYCYNCGKKGHYGHECVEA 256
>gi|223947177|gb|ACN27672.1| unknown [Zea mays]
gi|413932600|gb|AFW67151.1| hypothetical protein ZEAMMB73_637389 [Zea mays]
Length = 256
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 82/214 (38%), Gaps = 45/214 (21%)
Query: 162 VLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK 221
++ K R P +F TC NC GH A C S K C+ C H +C
Sbjct: 57 LVCKNCRRPGHFAKECPSAPTCNNCNLPGHFAAECTS----KTVCWNCKEPGHIASECKN 112
Query: 222 AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKE----- 276
C C K GH A+DCP SG N ++C KC SGH C N + ++ ++
Sbjct: 113 EALCHTCNKTGHLARDCPT---SG-ANVKLCNKCFKSGHIAVDCTNERACNNCRQPGHIA 168
Query: 277 ------VQCYICRCFGHLCCVNISDAVPGEVS----------CFRCGQLGHTGLHWNSCM 320
C +C GH+ V + E+ C CGQ GH
Sbjct: 169 RECKNDPVCNLCNVSGHVARVCPKTTLASEIHIQGGPFRDILCRICGQPGHI-------- 220
Query: 321 QACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
+R+ TV C CG GH + EC S+
Sbjct: 221 ---SRNCMATV-----ICDTCGGRGHMSYECPSA 246
>gi|426230074|ref|XP_004023537.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCHC domain-containing
protein 9 [Ovis aries]
Length = 271
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 14/110 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C +A++ ++ C+ CGS EH + +C D CF+
Sbjct: 129 VCFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 188
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
C + GH ++ CPD K + + C CG H C S + D + V
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGGCRLCGSVEHMKKDCPESQNSDRMVTV 238
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C++ GH DCP ++ +C +CG + H++ C+ +L
Sbjct: 120 RQAAKKNAMVCFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEITKCKAKVDPALG 179
Query: 273 DLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+ +C++C GHL C N C CG + H
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCRLCGSVEH 221
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 46/119 (38%), Gaps = 13/119 (10%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVP 298
K ++ +NA VC C GH + C + ++ CY C H C D
Sbjct: 119 KRQAAKKNAMVCFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEITKCKAKVDPAL 178
Query: 299 GEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
GE CF CG++GH SC + + A C CG+ H ++C S
Sbjct: 179 GEFPFAKCFVCGEMGHLS---RSC-----PDNPKGLYADGGGCRLCGSVEHMKKDCPES 229
>gi|50761973|ref|XP_424900.1| PREDICTED: zinc finger CCHC domain-containing protein 9 [Gallus
gallus]
Length = 235
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 14/108 (12%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CF 226
C++C E GH +C + ++ + C+ CGS EH + +C D CF
Sbjct: 93 MVCFHCREPGHGVADCPAVLESQDMGTGICYRCGSTEHDIGKCKAKIDPAVGAFPYAKCF 152
Query: 227 ICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDL 274
IC + GH ++ CPD K + C CG H C + +LD +
Sbjct: 153 ICGEMGHLSRSCPDNPKGLYAEGGCCRLCGSVEHYRKDCPENQNLDQV 200
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 222 AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLDDLKEVQC 279
A CF C++ GH DCP +S +C +CG + HD+ C+ ++ +C
Sbjct: 92 AMVCFHCREPGHGVADCPAVLESQDMGTGICYRCGSTEHDIGKCKAKIDPAVGAFPYAKC 151
Query: 280 YICRCFGHL--CCVNISDAVPGEVSCFR-CGQLGH 311
+IC GHL C + + E C R CG + H
Sbjct: 152 FICGEMGHLSRSCPDNPKGLYAEGGCCRLCGSVEH 186
>gi|343420304|emb|CCD19151.1| hypothetical protein, conserved in T. vivax [Trypanosoma vivax
Y486]
Length = 605
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 53/131 (40%), Gaps = 24/131 (18%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C+ C ++GHM C + CF CG +G C+ CF C GH + +C
Sbjct: 78 CFQCHQKGHMMPMCP-----QTRCFNCGHFGYGSELCTNKPVCFHCSMPGHTSTECLVNG 132
Query: 243 KSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVS 302
+ + C + GHDM C S QCY+C GHL A EV
Sbjct: 133 MGRLRYS-----CEEPGHDMAKCPQS--------PQCYMCNQTGHLV------AQCPEVL 173
Query: 303 CFRCGQLGHTG 313
C RC Q GH
Sbjct: 174 CNRCHQKGHMA 184
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 61/154 (39%), Gaps = 30/154 (19%)
Query: 209 CGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQ--VCLKCGDSGHDMFSCR 266
C S H R C + C C + GH +DCP + K ++ +C CG S H C
Sbjct: 12 CFSTGHLRRDCPLIK-CAACSRLGHFKEDCPHRRKRPRADSDIGICRSCGSSSHAQAKCP 70
Query: 267 NSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARS 326
+ +K V+C+ C GH+ + + CF CG G+
Sbjct: 71 -----ERIKSVECFQCHQKGHM------MPMCPQTRCFNCGHFGY--------------- 104
Query: 327 RGETVEASPSSCYNCGAEGHFARECVSSSKVRKR 360
G + + C++C GH + EC+ + R R
Sbjct: 105 -GSELCTNKPVCFHCSMPGHTSTECLVNGMGRLR 137
>gi|315044853|ref|XP_003171802.1| hypothetical protein MGYG_06345 [Arthroderma gypseum CBS 118893]
gi|311344145|gb|EFR03348.1| hypothetical protein MGYG_06345 [Arthroderma gypseum CBS 118893]
Length = 192
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 26/109 (23%)
Query: 181 QTCYNCGEEGHMAVNC----------------------RSAVKRKKPCFVCGSLEHGVRQ 218
Q CY CG+ GH+A NC S R + C+ CG H R
Sbjct: 88 QECYKCGQVGHIARNCSQQGGSGYGGGYGNSGSGSYGGGSYGGRSQTCYSCGGYGHMARD 147
Query: 219 CSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
C++ Q C+ C + GH ++DCP + K +VC KC +GH +C N
Sbjct: 148 CTQGQKCYNCGEVGHVSRDCPTEAK----GERVCYKCKQAGHVQAACPN 192
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 72/179 (40%), Gaps = 54/179 (30%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA----------- 222
D P +G TCYNCG +GH++ C K +K C+ CG H R+C +
Sbjct: 22 DCPKKGTPTCYNCGGQGHVSRECTQPPK-EKSCYRCGMTGHISRECPSSGSGDNNYSGGG 80
Query: 223 -------QDCFICKKGGHRAKDCPDKHKSGFQN------------------AQVCLKCGD 257
Q+C+ C + GH A++C + SG+ +Q C CG
Sbjct: 81 YSGGSGGQECYKCGQVGHIARNCSQQGGSGYGGGYGNSGSGSYGGGSYGGRSQTCYSCGG 140
Query: 258 SGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVP----GEVSCFRCGQLGHT 312
GH + D + +CY C GH +S P GE C++C Q GH
Sbjct: 141 YGH--------MARDCTQGQKCYNCGEVGH-----VSRDCPTEAKGERVCYKCKQAGHV 186
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 58/169 (34%), Gaps = 50/169 (29%)
Query: 220 SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQC 279
S + CF C + H+A+DCP K C CG GH C KE C
Sbjct: 5 SSGRGCFNCGESSHQARDCPKK------GTPTCYNCGGQGHVSREC-----TQPPKEKSC 53
Query: 280 YICRCFGHLCCVNISDAVPGEVS------------------CFRCGQLGHTGLHWNSCMQ 321
Y C GH IS P S C++CGQ+GH +C Q
Sbjct: 54 YRCGMTGH-----ISRECPSSGSGDNNYSGGGYSGGSGGQECYKCGQVGHIA---RNCSQ 105
Query: 322 ACARSRGETVEAS-------------PSSCYNCGAEGHFARECVSSSKV 357
G S +CY+CG GH AR+C K
Sbjct: 106 QGGSGYGGGYGNSGSGSYGGGSYGGRSQTCYSCGGYGHMARDCTQGQKC 154
>gi|395333861|gb|EJF66238.1| hypothetical protein DICSQDRAFT_48600 [Dichomitus squalens LYAD-421
SS1]
Length = 197
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 79/200 (39%), Gaps = 52/200 (26%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCS---KAQDCFICKKGGHRAKDCP 239
C+NCG GH A NC A C+ CG H + C+ KA+ C+ C + GH +++CP
Sbjct: 6 CFNCGGFGHQAANCPKA--GTPTCYNCGLEGHVSKDCTAETKAKTCYKCGQEGHISRECP 63
Query: 240 DKHKS-----------GFQNAQV----CLKCGDSGHDMFSCRNS-------------YSL 271
D + F ++ C +CG GH SC + +
Sbjct: 64 DNQNANGGTSGGGSYTAFSSSNSGSTECYRCGKVGHIARSCPEAPGGTSGGYGGGGYSNF 123
Query: 272 DDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETV 331
++ CY C GHL D V G C+ C GH +
Sbjct: 124 GGGQQRTCYTCGGVGHL----SRDCVQGS-KCYNCSGFGHISK--------------DCP 164
Query: 332 EASPSSCYNCGAEGHFAREC 351
+ +CY CG+EGH +R+C
Sbjct: 165 QPQRRACYTCGSEGHISRDC 184
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 69/172 (40%), Gaps = 48/172 (27%)
Query: 176 PDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC---------------- 219
P G TCYNCG EGH++ +C +A + K C+ CG H R+C
Sbjct: 20 PKAGTPTCYNCGLEGHVSKDC-TAETKAKTCYKCGQEGHISRECPDNQNANGGTSGGGSY 78
Query: 220 -------SKAQDCFICKKGGHRAKDCPDK-------------HKSGFQNAQVCLKCGDSG 259
S + +C+ C K GH A+ CP+ G + C CG G
Sbjct: 79 TAFSSSNSGSTECYRCGKVGHIARSCPEAPGGTSGGYGGGGYSNFGGGQQRTCYTCGGVG 138
Query: 260 HDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGH 311
H S D ++ +CY C FGH ++ P +C+ CG GH
Sbjct: 139 H--------LSRDCVQGSKCYNCSGFGH---ISKDCPQPQRRACYTCGSEGH 179
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 65/162 (40%), Gaps = 27/162 (16%)
Query: 206 CFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMF 263
CF CG H C KA C+ C GH +KDC + K A+ C KCG GH
Sbjct: 6 CFNCGGFGHQAANCPKAGTPTCYNCGLEGHVSKDCTAETK-----AKTCYKCGQEGHISR 60
Query: 264 SCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQAC 323
C ++ + + S + G C+RCG++GH SC +A
Sbjct: 61 ECPDNQNANGGTSGGGSY---------TAFSSSNSGSTECYRCGKVGHI---ARSCPEAP 108
Query: 324 ARSRGETVEASPS--------SCYNCGAEGHFARECVSSSKV 357
+ G S +CY CG GH +R+CV SK
Sbjct: 109 GGTSGGYGGGGYSNFGGGQQRTCYTCGGVGHLSRDCVQGSKC 150
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 23/112 (20%)
Query: 173 FDPPDRGWQTCYNCGEEGHMAVNCRSA-----------------VKRKKPCFVCGSLEHG 215
F + G CY CG+ GH+A +C A +++ C+ CG + H
Sbjct: 81 FSSSNSGSTECYRCGKVGHIARSCPEAPGGTSGGYGGGGYSNFGGGQQRTCYTCGGVGHL 140
Query: 216 VRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
R C + C+ C GH +KDCP + + C CG GH C N
Sbjct: 141 SRDCVQGSKCYNCSGFGHISKDCPQPQR------RACYTCGSEGHISRDCPN 186
>gi|408398051|gb|EKJ77187.1| hypothetical protein FPSE_02637 [Fusarium pseudograminearum CS3096]
Length = 435
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 70/177 (39%), Gaps = 39/177 (22%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAK 236
DRG C NC E GH++ C + E R C+ C GHR +
Sbjct: 238 DRGLPLCNNCKELGHVSKFC--------------TQEKMERTDGPKISCYNCGADGHRVR 283
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDA 296
DCP+ + C CG SGH + C + V+C C GH +
Sbjct: 284 DCPEPRI----DKNACKNCGKSGHKVADCEEP---PNPANVECRKCSEVGHF-----AKD 331
Query: 297 VP--GEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
P G +C CGQ GH + C + R + S +C NC +GH+++EC
Sbjct: 332 CPQGGGRACRNCGQEGHMA-------KECDQPR----DMSTVTCRNCEQQGHYSKEC 377
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 54/141 (38%), Gaps = 24/141 (17%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ-----DCFICKKGGHRAK 236
+CYNCG +GH +C K C CG H V C + +C C + GH AK
Sbjct: 271 SCYNCGADGHRVRDCPEPRIDKNACKNCGKSGHKVADCEEPPNPANVECRKCSEVGHFAK 330
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDA 296
DCP + C CG GH C D+ V C C GH S
Sbjct: 331 DCPQG------GGRACRNCGQEGHMAKECDQPR---DMSTVTCRNCEQQGHY-----SKE 376
Query: 297 VP-----GEVSCFRCGQLGHT 312
P +V C C + GHT
Sbjct: 377 CPLPRDWSKVQCSNCQEYGHT 397
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 292 NISDAVPG-EVSCFRCGQLGHTGLHWNSCMQACAR-------SRGETVEASPSSCYNCGA 343
++ D PG + CF CG++GH + + R R + EA P C NCG
Sbjct: 41 DLGDGQPGGDDKCFGCGEIGHRRAECPNPQEMACRYCKKEGHMRKDCPEAPPMVCENCGE 100
Query: 344 EGHFARECVSSSKVRKRNIDASTP 367
EGHF + C K+ + +I P
Sbjct: 101 EGHFRKHCEKPRKINRDHIADVHP 124
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
Query: 206 CFVCGSLEHGVRQCSKAQD--CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
CF CG + H +C Q+ C CKK GH KDCP+ VC CG+ GH
Sbjct: 53 CFGCGEIGHRRAECPNPQEMACRYCKKEGHMRKDCPEA------PPMVCENCGEEGH 103
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 12/99 (12%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD-----CFIC 228
+PP+ C C E GH A +C R C CG H ++C + +D C C
Sbjct: 310 EPPNPANVECRKCSEVGHFAKDCPQGGGRA--CRNCGQEGHMAKECDQPRDMSTVTCRNC 367
Query: 229 KKGGHRAKDCP-DKHKSGFQNAQVCLKCGDSGHDMFSCR 266
++ GH +K+CP + S Q C C + GH C+
Sbjct: 368 EQQGHYSKECPLPRDWSKVQ----CSNCQEYGHTKVRCK 402
>gi|345564451|gb|EGX47414.1| hypothetical protein AOL_s00083g507 [Arthrobotrys oligospora ATCC
24927]
Length = 196
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 72/168 (42%), Gaps = 46/168 (27%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK------------ 221
D P RG CYNCG++GH++ C+S K +K C+ CG H R+C+
Sbjct: 33 DCPKRGNPVCYNCGQDGHLSRECQSPPK-EKSCYRCGQTGHISRECTNESSGSSYSGGNS 91
Query: 222 ------AQDCFICKKGGHRAKDCPD----------KHKSGFQNAQVCLKCGDSGHDMFSC 265
+C+ C K GH A++C ++ SG Q C CG GH
Sbjct: 92 GGAAGSGAECYKCGKVGHIARNCQSGDNGGFGGGNRYASG--RGQTCYSCGGFGH----- 144
Query: 266 RNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVPGEVSCFRCGQLGH 311
S D + +CY C GHL C + D V C++C + GH
Sbjct: 145 ---MSRDCTQGQKCYNCGQIGHLSRDCTSEQDRV-----CYKCKKPGH 184
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 18/95 (18%)
Query: 183 CYNCGEEGHMAVNCRS------------AVKRKKPCFVCGSLEHGVRQCSKAQDCFICKK 230
CY CG+ GH+A NC+S A R + C+ CG H R C++ Q C+ C +
Sbjct: 101 CYKCGKVGHIARNCQSGDNGGFGGGNRYASGRGQTCYSCGGFGHMSRDCTQGQKCYNCGQ 160
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
GH ++DC + +VC KC GH M +C
Sbjct: 161 IGHLSRDCTSEQD------RVCYKCKKPGHIMSNC 189
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 78/193 (40%), Gaps = 44/193 (22%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKP-CFVCGSLEHGVRQCS---KAQDCFICKKGGHRAK 236
++CYNCG GH A +C KR P C+ CG H R+C K + C+ C + GH ++
Sbjct: 19 RSCYNCGGSGHQAKDC---PKRGNPVCYNCGQDGHLSRECQSPPKEKSCYRCGQTGHISR 75
Query: 237 DCPDKHKSGFQNAQV----------CLKCGDSGHDMFSCRNSYSLDDLKEVQ-------- 278
+C ++ + C KCG GH +C++ + +
Sbjct: 76 ECTNESSGSSYSGGNSGGAAGSGAECYKCGKVGHIARNCQSGDNGGFGGGNRYASGRGQT 135
Query: 279 CYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSC 338
CY C FGH+ D G+ C+ CGQ+GH SR T E C
Sbjct: 136 CYSCGGFGHM----SRDCTQGQ-KCYNCGQIGHL-------------SRDCTSEQD-RVC 176
Query: 339 YNCGAEGHFAREC 351
Y C GH C
Sbjct: 177 YKCKKPGHIMSNC 189
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD--CFICKKGGHRAKDC 238
QTCY+CG GHM+ +C K C+ CG + H R C+ QD C+ CKK GH +C
Sbjct: 134 QTCYSCGGFGHMSRDCTQGQK----CYNCGQIGHLSRDCTSEQDRVCYKCKKPGHIMSNC 189
Query: 239 PD 240
P+
Sbjct: 190 PE 191
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 56/146 (38%), Gaps = 24/146 (16%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
C+ C GH+AKDCP + VC CG GH C++ KE CY C
Sbjct: 21 CYNCGGSGHQAKDCPKR------GNPVCYNCGQDGHLSRECQSP-----PKEKSCYRCGQ 69
Query: 285 FGHLC--CVN-----------ISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETV 331
GH+ C N A C++CG++GH + S
Sbjct: 70 TGHISRECTNESSGSSYSGGNSGGAAGSGAECYKCGKVGHIARNCQSGDNGGFGGGNRYA 129
Query: 332 EASPSSCYNCGAEGHFARECVSSSKV 357
+CY+CG GH +R+C K
Sbjct: 130 SGRGQTCYSCGGFGHMSRDCTQGQKC 155
>gi|303322458|ref|XP_003071222.1| zinc knuckle containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240110921|gb|EER29077.1| zinc knuckle containing protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 195
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 69/170 (40%), Gaps = 38/170 (22%)
Query: 202 RKKPCFVCGSLEHGVRQCSKA--------QDCFICKKGGHRAKDCPDKHKSGFQNAQVCL 253
++K C+ CG H R C +A Q+C+ C + GH +++CP +SG Q C
Sbjct: 42 KEKSCYRCGLTGHISRDCPQAGESGGARGQECYKCGQVGHISRECPQGGESGEARGQECY 101
Query: 254 KCGDSGHDMFSC------------RNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEV 301
KCG GH +C SY + + + CY C +GH D G+
Sbjct: 102 KCGQVGHISRNCGQYSGYNGGGYNAGSYRYGN-RPLTCYSCGGYGH----RARDCTQGQ- 155
Query: 302 SCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
C+ CG+ GH + +GE V CY C GH C
Sbjct: 156 KCYNCGETGHVSRDCTT------EGKGERV------CYKCKQPGHVQAAC 193
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 59/151 (39%), Gaps = 30/151 (19%)
Query: 220 SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQC 279
+K + C+ C GH ++DCP +SG Q C KCG GH C + + +C
Sbjct: 41 AKEKSCYRCGLTGHISRDCPQAGESGGARGQECYKCGQVGHISRECPQGGESGEARGQEC 100
Query: 280 YICRCFGHLC--CVNISDAVPGE------------VSCFRCGQLGHTGLHWNSCMQACAR 325
Y C GH+ C S G ++C+ CG GH C Q
Sbjct: 101 YKCGQVGHISRNCGQYSGYNGGGYNAGSYRYGNRPLTCYSCGGYGH---RARDCTQG--- 154
Query: 326 SRGETVEASPSSCYNCGAEGHFARECVSSSK 356
CYNCG GH +R+C + K
Sbjct: 155 ----------QKCYNCGETGHVSRDCTTEGK 175
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 19/102 (18%)
Query: 181 QTCYNCGEEGHMAVNCRSAVK---------------RKKPCFVCGSLEHGVRQCSKAQDC 225
Q CY CG+ GH++ NC R C+ CG H R C++ Q C
Sbjct: 98 QECYKCGQVGHISRNCGQYSGYNGGGYNAGSYRYGNRPLTCYSCGGYGHRARDCTQGQKC 157
Query: 226 FICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
+ C + GH ++DC + K +VC KC GH +C N
Sbjct: 158 YNCGETGHVSRDCTTEGK----GERVCYKCKQPGHVQAACPN 195
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 35/131 (26%)
Query: 181 QTCYNCGEEGHMAVNC----RSAVKRKKPCFVCGSLEHGVRQC----------------- 219
Q CY CG+ GH++ C S R + C+ CG + H R C
Sbjct: 71 QECYKCGQVGHISRECPQGGESGEARGQECYKCGQVGHISRNCGQYSGYNGGGYNAGSYR 130
Query: 220 --SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
++ C+ C GHRA+DC Q C CG++GH C + + E
Sbjct: 131 YGNRPLTCYSCGGYGHRARDC--------TQGQKCYNCGETGHVSRDC----TTEGKGER 178
Query: 278 QCYICRCFGHL 288
CY C+ GH+
Sbjct: 179 VCYKCKQPGHV 189
>gi|320590859|gb|EFX03302.1| zinc knuckle domain containing protein [Grosmannia clavigera
kw1407]
Length = 190
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 66/171 (38%), Gaps = 41/171 (23%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK----------AQ 223
D P+RG CYNCG EGHM+ +C K K C+ CG H R C +
Sbjct: 20 DCPNRGAAKCYNCGGEGHMSRDCPEGPKETKTCYRCGQAGHISRDCPQSAGPGGSGPSGA 79
Query: 224 DCFICKKGGHRAKDCPDKHKSGFQNA-----------------------QVCLKCGDSGH 260
+C+ C + GH A++CP G + + C CG GH
Sbjct: 80 ECYKCGEVGHIARNCPKGGFGGNPSGGAGGYGNSYGGGGGGGGYGGNQNKTCYSCGGVGH 139
Query: 261 DMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGH 311
S D + +CY C GH + GE C++C Q GH
Sbjct: 140 --------MSRDCVNGSKCYNCGETGHFSRDCPKASTSGEKICYKCQQPGH 182
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 30/113 (26%)
Query: 183 CYNCGEEGHMAVNC---------------------------RSAVKRKKPCFVCGSLEHG 215
CY CGE GH+A NC + K C+ CG + H
Sbjct: 81 CYKCGEVGHIARNCPKGGFGGNPSGGAGGYGNSYGGGGGGGGYGGNQNKTCYSCGGVGHM 140
Query: 216 VRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNS 268
R C C+ C + GH ++DCP SG ++C KC GH C N+
Sbjct: 141 SRDCVNGSKCYNCGETGHFSRDCPKASTSG---EKICYKCQQPGHIQADCPNN 190
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 68/187 (36%), Gaps = 60/187 (32%)
Query: 204 KPCFVCGSLEHGVRQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHD 261
+ CF CG+ H R C A C+ C GH ++DCP+ G + + C +CG +GH
Sbjct: 6 RACFSCGATTHQARDCPNRGAAKCYNCGGEGHMSRDCPE----GPKETKTCYRCGQAGHI 61
Query: 262 MFSC--RNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEV------------------ 301
C +CY C GH I+ P
Sbjct: 62 SRDCPQSAGPGGSGPSGAECYKCGEVGH-----IARNCPKGGFGGNPSGGAGGYGNSYGG 116
Query: 302 -------------SCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFA 348
+C+ CG +GH SR + V S CYNCG GHF+
Sbjct: 117 GGGGGGYGGNQNKTCYSCGGVGHM-------------SR-DCVNGS--KCYNCGETGHFS 160
Query: 349 RECVSSS 355
R+C +S
Sbjct: 161 RDCPKAS 167
>gi|190347077|gb|EDK39288.2| hypothetical protein PGUG_03386 [Meyerozyma guilliermondii ATCC
6260]
Length = 175
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 77/191 (40%), Gaps = 40/191 (20%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD-----CFICKKGGHRA 235
+TCY CGE GH+A NC+ + ++ C+ C H +C + + C+ C GH
Sbjct: 7 RTCYKCGEVGHLADNCQ---QTERLCYNCRKPGHESTECPEPKQPSQKQCYSCGDLGHVQ 63
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCR----------NSYSLDDLKE--VQCYICR 283
DCP + Q A+ C CG GH +C S + CY C
Sbjct: 64 SDCP----TSAQGAK-CYNCGQFGHISKNCSEGGRPAAASTGSAPAPKFSKNGTTCYKCG 118
Query: 284 CFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGA 343
H D G + C+ CG+ GH N+ +A +CYNCG
Sbjct: 119 GPNHF----ARDCQAGSLKCYACGKAGHISKDCNA-----------GGDAGAKTCYNCGK 163
Query: 344 EGHFARECVSS 354
GH +R+C S
Sbjct: 164 AGHISRDCEES 174
>gi|225708204|gb|ACO09948.1| Zinc finger CCHC domain-containing protein 9 [Osmerus mordax]
Length = 293
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLDDLKEVQCYIC 282
CF C+K GH DCP+ + +C +CG + H++ CR +LD+ +C+IC
Sbjct: 154 CFNCRKPGHGLADCPEAERDEEMGRDICYRCGSTEHEIQRCRAKIDPALDEYPYAKCFIC 213
Query: 283 RCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
GHL C N SC CG + H
Sbjct: 214 GKMGHLSRSCSDNPKGLYAAGGSCRVCGSVEH 245
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 14/97 (14%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFIC 228
C+NC + GH +C A + ++ C+ CGS EH +++C D CFIC
Sbjct: 154 CFNCRKPGHGLADCPEAERDEEMGRDICYRCGSTEHEIQRCRAKIDPALDEYPYAKCFIC 213
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
K GH ++ C D K + C CG H C
Sbjct: 214 GKMGHLSRSCSDNPKGLYAAGGSCRVCGSVEHFQKDC 250
>gi|21429778|gb|AAM50567.1| AT22983p [Drosophila melanogaster]
Length = 186
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRA 235
Q C+ C EEGH+A +CRS V R + CF CG+ H +C K CF+C G++A
Sbjct: 98 QRCFRCLEEGHIAAHCRSTVDRSQCCFRCGTAGHKA-ECPKEAKCFLCASRGNQA 151
>gi|319921905|gb|ADV78571.1| universal minicircle sequence-binding protein 1 [Leishmania
donovani]
Length = 115
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 12/111 (10%)
Query: 182 TCYNCGEEGHMAVNC-RSAVKRKKPCFVCGSLEHGVRQCS---KAQDCFICKKGGHRAKD 237
TCY CGE GHM+ +C R+A R C+ CG H R C K + C+ C H +++
Sbjct: 5 TCYKCGEAGHMSRSCPRAAATRS--CYNCGETSHMSRDCPSERKPKSCYNCGSTDHLSRE 62
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
C ++ K+G + + C CG +GH C N + K CY C HL
Sbjct: 63 CTNEAKAG-ADTRSCYNCGGTGHLSRDCPN-----ERKPKSCYNCGSTDHL 107
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 13/93 (13%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK-------AQDCFI 227
P ++CYNCGE HM+ +C S ++ K C+ CGS +H R+C+ + C+
Sbjct: 20 PRAAATRSCYNCGETSHMSRDCPSE-RKPKSCYNCGSTDHLSRECTNEAKAGADTRSCYN 78
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
C GH ++DCP++ K + C CG + H
Sbjct: 79 CGGTGHLSRDCPNERK-----PKSCYNCGSTDH 106
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKR---KKPCFVCGSLEHGVRQCS---KAQDCFIC 228
P +R ++CYNCG H++ C + K + C+ CG H R C K + C+ C
Sbjct: 42 PSERKPKSCYNCGSTDHLSRECTNEAKAGADTRSCYNCGGTGHLSRDCPNERKPKSCYNC 101
Query: 229 KKGGHRAKDCPDKH 242
H +++CPD+H
Sbjct: 102 GSTDHLSRECPDRH 115
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 15/69 (21%)
Query: 301 VSCFRCGQLGHTGLHWNSCMQACAR------------SRGETVEASPSSCYNCGAEGHFA 348
V+C++CG+ GH SC +A A SR E P SCYNCG+ H +
Sbjct: 4 VTCYKCGEAGHMS---RSCPRAAATRSCYNCGETSHMSRDCPSERKPKSCYNCGSTDHLS 60
Query: 349 RECVSSSKV 357
REC + +K
Sbjct: 61 RECTNEAKA 69
>gi|448086305|ref|XP_004196068.1| Piso0_005509 [Millerozyma farinosa CBS 7064]
gi|359377490|emb|CCE85873.1| Piso0_005509 [Millerozyma farinosa CBS 7064]
Length = 178
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 75/185 (40%), Gaps = 36/185 (19%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD-----CFICKKGGHRAK 236
TCY CGE GH+A NC+ ++++ C+ C H C + + C+ C GH
Sbjct: 8 TCYKCGEVGHLADNCQ---QQERLCYNCREAGHESNDCPQPKQASQKQCYSCGDLGHLQG 64
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDL----------KEVQCYICRCFG 286
+CP + + C CG GH C ++ + K CY C
Sbjct: 65 ECPTQSQ-----GSKCYNCGQFGHISKQCSSASGQAAVPKKANGARFPKAATCYKCGGPN 119
Query: 287 HLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGH 346
H D G V C+ CG+ GH A + G+++ +CY CG GH
Sbjct: 120 HF----ARDCQAGLVKCYACGKTGHISKECP------AAASGDSLA---KACYQCGQVGH 166
Query: 347 FAREC 351
++EC
Sbjct: 167 ISKEC 171
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 58/146 (39%), Gaps = 31/146 (21%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGH 233
P + CY+CG+ GH+ C + + K C+ CG H +QCS A G
Sbjct: 44 QPKQASQKQCYSCGDLGHLQGECPTQSQGSK-CYNCGQFGHISKQCSSAS--------GQ 94
Query: 234 RAKDCPDKHKSG-FQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVN 292
A P K F A C KCG H C+ V+CY C GH
Sbjct: 95 AAV--PKKANGARFPKAATCYKCGGPNHFARDCQAGL-------VKCYACGKTGH----- 140
Query: 293 ISDAVPGEVS-------CFRCGQLGH 311
IS P S C++CGQ+GH
Sbjct: 141 ISKECPAAASGDSLAKACYQCGQVGH 166
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 32/111 (28%)
Query: 251 VCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVP-----GEVSCFR 305
C KCG+ GH +C+ +E CY CR GH S+ P + C+
Sbjct: 8 TCYKCGEVGHLADNCQQ-------QERLCYNCREAGHE-----SNDCPQPKQASQKQCYS 55
Query: 306 CGQLGHTGLHWNSCMQACARSRGET-VEASPSSCYNCGAEGHFARECVSSS 355
CG LGH +GE ++ S CYNCG GH +++C S+S
Sbjct: 56 CGDLGHL--------------QGECPTQSQGSKCYNCGQFGHISKQCSSAS 92
>gi|326500674|dbj|BAJ95003.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 306
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 85/221 (38%), Gaps = 45/221 (20%)
Query: 162 VLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK 221
++ K R P + TC NC GH A C S K C+ C H +C
Sbjct: 108 IICKNCRRPGHIARDCPSASTCNNCNLPGHFAAECTS----KTVCWNCKKSGHIATECKN 163
Query: 222 AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKE----- 276
C C K GH A+DCP SG NA++C C GH C N + ++ ++
Sbjct: 164 EALCHTCSKTGHMARDCP---ASG-SNAKLCNNCFKPGHIAVDCTNDRACNNCRQPGHIA 219
Query: 277 ------VQCYICRCFGHLC-----CVNISDAVPG----EVSCFRCGQLGHTGLHWNSCMQ 321
C +C GHL ++ + G ++SC CGQ GH
Sbjct: 220 RECKNDPVCNLCNVSGHLARSCPKTTTLASEIHGGPFRDISCRICGQPGHI--------- 270
Query: 322 ACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVRKRNI 362
SR V C CG GH + EC S++V R +
Sbjct: 271 ----SRNCMVTV---ICDTCGGRGHMSYEC-PSARVFDRGV 303
>gi|242807741|ref|XP_002485018.1| zinc knuckle domain protein (Byr3), putative [Talaromyces
stipitatus ATCC 10500]
gi|218715643|gb|EED15065.1| zinc knuckle domain protein (Byr3), putative [Talaromyces
stipitatus ATCC 10500]
Length = 181
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 81/195 (41%), Gaps = 43/195 (22%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVKRKKP-CFVCGSLEHGVRQCSKA---QDCFICKKGGHR 234
G + C+NCGE H A R K+ P C+ CG H R+C++A + C+ C + GH
Sbjct: 6 GSRGCFNCGEPSHQA---RDCPKKGTPTCYNCGGQGHVSRECTQAPKEKSCYRCGQTGHI 62
Query: 235 AKDC----PDKHKSGFQ-------NAQVCLKCGDSGHDMFSCRN------SYSLDDLKEV 277
++DC P + ++ Q C KCG GH +C + ++
Sbjct: 63 SRDCQQSGPANNGGNYRGGFSGGSGGQECYKCGQVGHIARNCSQGGGYGGGHGGFGGRQQ 122
Query: 278 QCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSS 337
CY C +GH+ D G+ C+ CG++GH SR T E +
Sbjct: 123 TCYSCGGYGHM----ARDCTQGQ-KCYNCGEVGHV-------------SRDCTTEGNGER 164
Query: 338 -CYNCGAEGHFAREC 351
CY C GH C
Sbjct: 165 VCYKCKQPGHVQSAC 179
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 14/97 (14%)
Query: 181 QTCYNCGEEGHMAVNC----------RSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKK 230
Q CY CG+ GH+A NC R++ C+ CG H R C++ Q C+ C +
Sbjct: 89 QECYKCGQVGHIARNCSQGGGYGGGHGGFGGRQQTCYSCGGYGHMARDCTQGQKCYNCGE 148
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
GH ++DC + +VC KC GH +C N
Sbjct: 149 VGHVSRDCTTEGNG----ERVCYKCKQPGHVQSACPN 181
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 70/164 (42%), Gaps = 35/164 (21%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA----------- 222
D P +G TCYNCG +GH++ C A K +K C+ CG H R C ++
Sbjct: 22 DCPKKGTPTCYNCGGQGHVSRECTQAPK-EKSCYRCGQTGHISRDCQQSGPANNGGNYRG 80
Query: 223 --------QDCFICKKGGHRAKDCPDKHKSGFQNA------QVCLKCGDSGHDMFSCRNS 268
Q+C+ C + GH A++C G + Q C CG GH
Sbjct: 81 GFSGGSGGQECYKCGQVGHIARNCSQGGGYGGGHGGFGGRQQTCYSCGGYGH-------- 132
Query: 269 YSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHT 312
+ D + +CY C GH+ + + GE C++C Q GH
Sbjct: 133 MARDCTQGQKCYNCGEVGHV-SRDCTTEGNGERVCYKCKQPGHV 175
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 56/150 (37%), Gaps = 27/150 (18%)
Query: 222 AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYI 281
++ CF C + H+A+DCP K C CG GH C + KE CY
Sbjct: 7 SRGCFNCGEPSHQARDCPKK------GTPTCYNCGGQGHVSRECTQA-----PKEKSCYR 55
Query: 282 CRCFGHLC--CVNISDAVPG------------EVSCFRCGQLGHTGLHWNSCMQACARSR 327
C GH+ C A G C++CGQ+GH + N
Sbjct: 56 CGQTGHISRDCQQSGPANNGGNYRGGFSGGSGGQECYKCGQVGH--IARNCSQGGGYGGG 113
Query: 328 GETVEASPSSCYNCGAEGHFARECVSSSKV 357
+CY+CG GH AR+C K
Sbjct: 114 HGGFGGRQQTCYSCGGYGHMARDCTQGQKC 143
>gi|91179150|gb|ABE27759.1| vasa [Azumapecten farreri]
Length = 801
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 12/98 (12%)
Query: 183 CYNCGEEGHMAVNCRSAVKRK---KPCFVCGSLEHGVRQCSKA--------QDCFICKKG 231
C+ CGEEGH A C + + CF CG H R+C K + CF C +
Sbjct: 198 CHKCGEEGHFARECPTGGGGGGGDRSCFKCGEQGHMSRECPKGGGGGGGGDRSCFKCGEQ 257
Query: 232 GHRAKDCPDKHKSGFQNA-QVCLKCGDSGHDMFSCRNS 268
GH +++CP G + C KCG+ GH C N+
Sbjct: 258 GHMSRECPSSGGGGGGGGDRGCFKCGEQGHFSRECPNA 295
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 12/136 (8%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQV-CLKCGDSGHDMFSCRNSYSLDDLKEVQCYICR 283
C C + GH A++CP C KCG+ GH C + + C+ C
Sbjct: 170 CHKCGEDGHFARECPTGGGGRGGGGGGKCHKCGEEGHFAREC-PTGGGGGGGDRSCFKCG 228
Query: 284 CFGHL---CCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYN 340
GH+ C G+ SCF+CG+ GH + C S G C+
Sbjct: 229 EQGHMSRECPKGGGGGGGGDRSCFKCGEQGHMS-------RECPSSGGGGGGGGDRGCFK 281
Query: 341 CGAEGHFARECVSSSK 356
CG +GHF+REC ++ K
Sbjct: 282 CGEQGHFSRECPNAEK 297
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 13/80 (16%)
Query: 181 QTCYNCGEEGHMAVNC----RSAVKRKKPCFVCGSLEHGVRQCSKA---------QDCFI 227
++C+ CGE+GHM+ C + CF CG H R+C + + CF
Sbjct: 222 RSCFKCGEQGHMSRECPKGGGGGGGGDRSCFKCGEQGHMSRECPSSGGGGGGGGDRGCFK 281
Query: 228 CKKGGHRAKDCPDKHKSGFQ 247
C + GH +++CP+ KSG Q
Sbjct: 282 CGEQGHFSRECPNAEKSGIQ 301
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 12/98 (12%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP-----CFVCGSLEHGVRQCSKA-------QDCFICKK 230
C+ CGE+GH A C + + C CG H R+C + CF C +
Sbjct: 170 CHKCGEDGHFARECPTGGGGRGGGGGGKCHKCGEEGHFARECPTGGGGGGGDRSCFKCGE 229
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNS 268
GH +++CP G + C KCG+ GH C +S
Sbjct: 230 QGHMSRECPKGGGGGGGGDRSCFKCGEQGHMSRECPSS 267
>gi|347828477|emb|CCD44174.1| hypothetical protein [Botryotinia fuckeliana]
Length = 503
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 16/104 (15%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ-------DCFICKKGGHRA 235
C+NCGEEGH C K + C+ CG H +C+ C IC++ GHRA
Sbjct: 73 CFNCGEEGHSKAECTQPPKARS-CYNCGEEGHTKAECTNPAVAREFTGTCRICEQSGHRA 131
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD--DLKEV 277
CP ++C C + GH + C+N ++ D+++V
Sbjct: 132 SGCPSAP------PKLCNNCKEEGHSILECKNPRKIERNDVEDV 169
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 73/188 (38%), Gaps = 32/188 (17%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRS----AVKRKKPCFVCGSLEHGVRQCSKAQD----C 225
+P DRG C C E GH +C + + CF C + H VR C ++ C
Sbjct: 281 EPVDRGVPLCSRCNELGHTVKHCTEERVDGERVQVQCFNCSEIGHRVRDCPIPREDKFAC 340
Query: 226 FICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCF 285
CKK GH +K+CP+ + C C + GH FS R+ + C C
Sbjct: 341 RNCKKSGHSSKECPEPRSA---EGVECKNCNEIGH--FS-RDCPTGGGGDGGLCRNCNQP 394
Query: 286 GHLC--CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGA 343
GH C N + C C + GHTG + C + R + S C NC
Sbjct: 395 GHRAKDCTNERVMI-----CRNCDEEGHTG-------KECPKPR----DYSRVQCQNCKQ 438
Query: 344 EGHFAREC 351
GH C
Sbjct: 439 MGHTKVRC 446
>gi|67968237|dbj|BAE00180.1| VASA RNA helicase [Daphnia magna]
Length = 779
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 61/148 (41%), Gaps = 14/148 (9%)
Query: 179 GWQTCYNCGEEGHMAVNC----RSAVKRKKPCFVCGSLEHGVRQCSKA--------QDCF 226
G + C+ CGEEGHMA C + C CG H R+C +A + C
Sbjct: 137 GGRPCHKCGEEGHMARECPKGGGGGGGGSRACHKCGEEGHFSRECPQAGGGGGSGPRTCH 196
Query: 227 ICKKGGHRAKDCPD--KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
C + GH +++CP G ++ C KCG+ GH C C+ C
Sbjct: 197 KCGEEGHFSRECPQGGGGGGGGGGSRACHKCGEEGHFSRECPQGGGGGGSGPRTCHKCGE 256
Query: 285 FGHLCCVNISDAVPGEVSCFRCGQLGHT 312
GH+ G+ CF+C + GHT
Sbjct: 257 EGHMSRDCPQGGGGGDGKCFKCHEAGHT 284
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 57/142 (40%), Gaps = 13/142 (9%)
Query: 215 GVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDL 274
G++ + C C + GH A++CP G ++ C KCG+ GH C +
Sbjct: 131 GLKSTGGGRPCHKCGEEGHMARECPKGGGGGGGGSRACHKCGEEGHFSRECPQAGGGGGS 190
Query: 275 KEVQCYICRCFGHL---CCVNISDAVPGEVS--CFRCGQLGHTGLHWNSCMQACARSRGE 329
C+ C GH C G S C +CG+ GH C Q
Sbjct: 191 GPRTCHKCGEEGHFSRECPQGGGGGGGGGGSRACHKCGEEGHFS---RECPQGGGGG--- 244
Query: 330 TVEASPSSCYNCGAEGHFAREC 351
+ P +C+ CG EGH +R+C
Sbjct: 245 --GSGPRTCHKCGEEGHMSRDC 264
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 19/117 (16%)
Query: 181 QTCYNCGEEGHMAVNC------RSAVKRKKPCFVCGSLEHGVRQCSKA--------QDCF 226
+TC+ CGEEGH + C + C CG H R+C + + C
Sbjct: 193 RTCHKCGEEGHFSRECPQGGGGGGGGGGSRACHKCGEEGHFSRECPQGGGGGGSGPRTCH 252
Query: 227 ICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYS--LDDLKEVQCYI 281
C + GH ++DCP G C KC ++GH C N +S +D K + YI
Sbjct: 253 KCGEEGHMSRDCPQGGGGGDGK---CFKCHEAGHTSKDCPNPFSELTEDGKPREQYI 306
>gi|145528175|ref|XP_001449887.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417476|emb|CAK82490.1| unnamed protein product [Paramecium tetraurelia]
Length = 298
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 27/198 (13%)
Query: 99 DVIIEDVKSSDKKRIRVRKKKKKEADKIEIEDQSVIVRKEEQKVETADNGDEGVTTVEIS 158
D +IE + + +K++ K ++ K+ I QS ++ +E+K ET D+ ++
Sbjct: 121 DYLIE-YELNGQKKMTSMKNLNEKISKLNI--QSKQIQNDEEKNETNDDN----LKQDLK 173
Query: 159 DNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
D + L RY+ ++ C+ C + GH C ++ C C S +H
Sbjct: 174 DQLELG----VNRYYQY--NPFEYCFRCKQSGHQERQCTE--QQTIQCNYCLSQKHVGDI 225
Query: 219 CSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC----RNSYSLDDL 274
CS CF C + GHR DC + K Q C+ CG + H C + + L D
Sbjct: 226 CSNV-SCFRCNQIGHRKNDCRTQLK-----LQQCINCGKNSHKESECGMLTQQIHKLKD- 278
Query: 275 KEVQCYICRCFGHLCCVN 292
+++C++CR +GH+ C N
Sbjct: 279 -QIECFVCRLYGHINCQN 295
>gi|389747183|gb|EIM88362.1| hypothetical protein STEHIDRAFT_138700 [Stereum hirsutum FP-91666
SS1]
Length = 656
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 103/275 (37%), Gaps = 45/275 (16%)
Query: 182 TCYNCG-EEGHMAVNCRSAVKRKKPCFVCGSL-EHGVRQCSKAQDCFICKKGGHRAKDCP 239
C CG + H CR+ + C CG+ EH C ++ CF C GH +DCP
Sbjct: 256 VCKKCGVKNDHKTWECRTQI-----CLTCGARDEHSTYGCPVSKVCFTCNMKGHLNRDCP 310
Query: 240 DK---HKSGFQNAQVCLKCGDSGHDMFSC-----RNSYSLDDLKEVQCYICRCFGHLCCV 291
++ H C +CG H C + Y D+ + I R + +
Sbjct: 311 NRAIAHSMAADKYHDCDRCGSQNHTTQECPTLWRQYVYVTDNERND---ILRQREEMRAL 367
Query: 292 NISDAVPGEVS----CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHF 347
+ G ++ C+ CG H G + C + +E S S YN G F
Sbjct: 368 GLGQGGEGYIAGDDWCYNCGSANHLG---DDC-EVLRHPPDFPIEPSAFSSYNT-LSGPF 422
Query: 348 ARECVSSSKVRKRNIDASTPTFRPHRENKDHSGIKSAPHDLGKVHKRKKTQHEERGIMTS 407
+ + R+ D T P R + +AP+++G+ K K
Sbjct: 423 SDSPAQIERHRRELRDWENDTTIPDRWD------SNAPNNVGRQAKDKNRA--------- 467
Query: 408 RKSKQRGGWITDDPGDISYGKPKRNHWRSPGTPSS 442
+ QR + +D GD +G P+ + RS G P S
Sbjct: 468 -RLAQRAQELEEDEGDDWFGNPR--NARSRGVPPS 499
>gi|451994035|gb|EMD86507.1| hypothetical protein COCHEDRAFT_1116571 [Cochliobolus
heterostrophus C5]
Length = 450
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 72/188 (38%), Gaps = 30/188 (15%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNC------RSAVKRKKPCFVCGSLEHGVRQCSKAQ---- 223
D DRG C NCGE GH+ C R + + C C + H R C+K +
Sbjct: 240 DVQDRGVPLCGNCGELGHIRKYCKQEQVERDTHQPEIQCVNCKEIGHRARDCTKERFNPF 299
Query: 224 DCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICR 283
C CK+ GH AK+CP+ + C KC + GH C N + C C
Sbjct: 300 ACKNCKQEGHNAKECPEPRSA---EGVECRKCNEMGHFSKDCPN------VAARTCRNCG 350
Query: 284 CFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGA 343
H+ P V C C Q+GH +R E + S C NCG
Sbjct: 351 STEHMAKECYQPRNPDTVVCRNCEQMGHF-----------SRDCPEPKDWSKHKCSNCGE 399
Query: 344 EGHFAREC 351
GH + C
Sbjct: 400 LGHGPKRC 407
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
C ICK+ GH A+DCP K + G C CG GH+ C N V C +C
Sbjct: 47 CRICKQSGHYARDCPSKPEGGSGLTGECFNCGQVGHNKADCTNERVQRPFDGV-CKLCDQ 105
Query: 285 FGH 287
GH
Sbjct: 106 PGH 108
>gi|225555534|gb|EEH03826.1| zinc knuckle domain-containing protein [Ajellomyces capsulatus
G186AR]
Length = 184
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 25/108 (23%)
Query: 181 QTCYNCGEEGHMAVNC---------------------RSAVKRKKPCFVCGSLEHGVRQC 219
Q CY CG+ GH+A NC R++ C+ CG H R C
Sbjct: 81 QECYKCGQVGHIARNCSQSGGYGSGGYGGATGGGYSGGYGGGRQQTCYSCGGYGHMARDC 140
Query: 220 SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
++ Q C+ C + GH ++DCP + K +VC KC GH +C N
Sbjct: 141 TQGQKCYNCGEVGHVSRDCPTEAK----GERVCYKCKQPGHVQATCPN 184
>gi|351706763|gb|EHB09682.1| Zinc finger CCHC domain-containing protein 9 [Heterocephalus
glaber]
Length = 271
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C +A++ + C+ CGS EH + +C D CF+
Sbjct: 129 VCFHCRKPGHGVADCPAALENQDMGTGICYRCGSTEHEITKCRAKVDPALGEFPFAKCFV 188
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
C + GH ++ CPD K + + C CG H C + LD + V
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGGCKVCGSVEHLKKDCPENQRLDRVVTV 238
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLDDLKEVQCYIC 282
CF C+K GH DCP ++ +C +CG + H++ CR +L + +C++C
Sbjct: 130 CFHCRKPGHGVADCPAALENQDMGTGICYRCGSTEHEITKCRAKVDPALGEFPFAKCFVC 189
Query: 283 RCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
GHL C N C CG + H
Sbjct: 190 GEMGHLSRSCPDNPKGLYADGGGCKVCGSVEH 221
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 47/122 (38%), Gaps = 13/122 (10%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVP 298
K ++ +N VC C GH + C + D+ CY C H C D
Sbjct: 119 KRQAAKKNTMVCFHCRKPGHGVADCPAALENQDMGTGICYRCGSTEHEITKCRAKVDPAL 178
Query: 299 GEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSS 355
GE CF CG++GH SC + + A C CG+ H ++C +
Sbjct: 179 GEFPFAKCFVCGEMGHLS---RSCP-----DNPKGLYADGGGCKVCGSVEHLKKDCPENQ 230
Query: 356 KV 357
++
Sbjct: 231 RL 232
>gi|332079156|gb|AEE00158.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 448
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 10/81 (12%)
Query: 150 EGVTTVEISDNIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFV 208
E ++ V S NI+++K +GPR C+NCG+EGH+A NCR+ RKK C+
Sbjct: 365 EAMSQVTTSANIMMQKGNFKGPRRI-------VKCFNCGKEGHLARNCRAP--RKKGCWK 415
Query: 209 CGSLEHGVRQCSKAQDCFICK 229
CG H ++ C++ Q F+ K
Sbjct: 416 CGKEGHQMKDCTERQANFLGK 436
>gi|452985547|gb|EME85303.1| hypothetical protein MYCFIDRAFT_101930, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 184
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 80/202 (39%), Gaps = 49/202 (24%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCS---KAQDCFICKKGGHRA 235
G + CYNCG+ H A C + K C+ CG H R C+ K + C+ C + GH +
Sbjct: 1 GGRACYNCGDTTHQARECPN--KGNPTCYNCGGQGHLSRDCTEPAKDKSCYACGETGHMS 58
Query: 236 KDCPDKHKSGFQNA---------QVCLKCGDSGHDMFSCRN----------------SYS 270
++CP+ G ++ Q C KCG GH +C
Sbjct: 59 RECPNGGGGGARSGGFGGGAGSDQECYKCGKVGHIARNCTQGGYGGGNFGGGRGGFGGGY 118
Query: 271 LDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGET 330
+ CY C +GHL D V G+ C+ CG+LGH SR +
Sbjct: 119 GGGNSQQSCYTCGGYGHL----SRDCVQGQ-KCYNCGELGHL-------------SRDCS 160
Query: 331 VEASPS-SCYNCGAEGHFAREC 351
EAS +CY C GH C
Sbjct: 161 SEASSERTCYRCKQPGHVQASC 182
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 24/107 (22%)
Query: 181 QTCYNCGEEGHMAVNC--------------------RSAVKRKKPCFVCGSLEHGVRQCS 220
Q CY CG+ GH+A NC ++ C+ CG H R C
Sbjct: 82 QECYKCGKVGHIARNCTQGGYGGGNFGGGRGGFGGGYGGGNSQQSCYTCGGYGHLSRDCV 141
Query: 221 KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
+ Q C+ C + GH ++DC + S + C +C GH SC N
Sbjct: 142 QGQKCYNCGELGHLSRDCSSEASS----ERTCYRCKQPGHVQASCPN 184
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 59/169 (34%), Gaps = 40/169 (23%)
Query: 204 KPCFVCGSLEHGVRQCSKAQD--CFICKKGGHRAKDC--PDKHKSGFQNAQVCLKCGDSG 259
+ C+ CG H R+C + C+ C GH ++DC P K KS C CG++G
Sbjct: 3 RACYNCGDTTHQARECPNKGNPTCYNCGGQGHLSRDCTEPAKDKS-------CYACGETG 55
Query: 260 HDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSC 319
H C N + C++CG++GH +C
Sbjct: 56 HMSRECPNGGGGGARSGG---------------FGGGAGSDQECYKCGKVGHIA---RNC 97
Query: 320 MQACARSRGETVEA-----------SPSSCYNCGAEGHFARECVSSSKV 357
Q S SCY CG GH +R+CV K
Sbjct: 98 TQGGYGGGNFGGGRGGFGGGYGGGNSQQSCYTCGGYGHLSRDCVQGQKC 146
>gi|403215016|emb|CCK69516.1| hypothetical protein KNAG_0C04130 [Kazachstania naganishii CBS
8797]
Length = 372
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 75/200 (37%), Gaps = 36/200 (18%)
Query: 127 EIEDQSVIVRKEEQKVETADNGDEGVTTVEI----SDNIVLRKLLRGPRYF-------DP 175
E+E + + ++ NG + I D VLR L RYF D
Sbjct: 7 EVESMDTLPFVTDTNPSSSSNGKPKLVAPSIEEVDGDPEVLRSLRGQGRYFGVEDGDKDS 66
Query: 176 PDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLE-HGVRQCSKAQDCFICKKGGHR 234
C NC + GH+ +C + C CGS++ H +QC KA C C + GH
Sbjct: 67 IKEAVPKCSNCSQRGHLKKHCTHVI-----CTYCGSMDDHYSKQCPKAIKCTNCNENGHY 121
Query: 235 AKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNIS 294
CP K K + C C H C + + L++ + + +
Sbjct: 122 RSQCPQKWKRIY-----CTLCNSKRHSRDRCPTIWRVYLLRDKKDRLKK----------- 165
Query: 295 DAVPGE-VSCFRCGQLGHTG 313
VP E V C+ CG GH G
Sbjct: 166 --VPFEKVYCYNCGSQGHFG 183
>gi|118485064|gb|ABK94395.1| unknown [Populus trichocarpa]
Length = 278
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 10/115 (8%)
Query: 206 CFVCGSLEHGVRQCS------KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSG 259
CF+C + +H + C K + C +C+ GH K CP K+ + ++C CG++G
Sbjct: 78 CFICKAKDHIAKLCPQKDEWEKNKICLLCRHRGHSLKRCPKKNDETM-DQKLCYNCGETG 136
Query: 260 HDMFSCRNSYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
H + C K C+IC GHL C N P C CG + H
Sbjct: 137 HSLSQCPQPREDGGTKFANCFICNERGHLSKDCPKNNRGIYPKGGCCKLCGGVTH 191
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 39/96 (40%), Gaps = 11/96 (11%)
Query: 181 QTCYNCGEEGHMAVNC---RSAVKRKKPCFVCGSLEHGVRQC--------SKAQDCFICK 229
+ C C GH C +K C+ CG H + QC +K +CFIC
Sbjct: 101 KICLLCRHRGHSLKRCPKKNDETMDQKLCYNCGETGHSLSQCPQPREDGGTKFANCFICN 160
Query: 230 KGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
+ GH +KDCP ++ + C CG H C
Sbjct: 161 ERGHLSKDCPKNNRGIYPKGGCCKLCGGVTHLARDC 196
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 39/134 (29%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC--RNSYSLDDLKEVQCYIC 282
CFICK H AK CP K + ++ ++CL C GH + C +N ++D
Sbjct: 78 CFICKAKDHIAKLCPQKDE--WEKNKICLLCRHRGHSLKRCPKKNDETMD---------- 125
Query: 283 RCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCG 342
+ C+ CG+ GH+ + C Q R G T A+ C+ C
Sbjct: 126 -----------------QKLCYNCGETGHS---LSQCPQP--REDGGTKFAN---CFICN 160
Query: 343 AEGHFARECVSSSK 356
GH +++C +++
Sbjct: 161 ERGHLSKDCPKNNR 174
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 12/77 (15%)
Query: 181 QTCYNCGEEGHMAVNCRSAVK----RKKPCFVCGSLEHGVRQCSKAQD--------CFIC 228
+ CYNCGE GH C + + CF+C H + C K C +C
Sbjct: 127 KLCYNCGETGHSLSQCPQPREDGGTKFANCFICNERGHLSKDCPKNNRGIYPKGGCCKLC 186
Query: 229 KKGGHRAKDCPDKHKSG 245
H A+DCPDK K G
Sbjct: 187 GGVTHLARDCPDKGKRG 203
>gi|383858908|ref|XP_003704941.1| PREDICTED: uncharacterized protein LOC100880872 [Megachile
rotundata]
Length = 430
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 182 TCYNCGEEGHMAVNC---RSAVKRKKPCFVCGSLEHGVRQCSKAQ-------DCFICKKG 231
C++C + GH +C +S CF CGS EH +C A+ CFIC++
Sbjct: 295 VCFHCRKSGHNLSDCPELQSEQAGTGICFKCGSTEHTHFECKVAKPTEFRYATCFICREQ 354
Query: 232 GHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
GH AK CPD K + C CGD H
Sbjct: 355 GHIAKQCPDNPKGVYPQGGCCKICGDVTH 383
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 13/94 (13%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQ----VCLKCGDSGHDMFSCRNSYSLDDLKEVQCY 280
CF C+K GH DCP+ Q+ Q +C KCG + H F C+ + + + C+
Sbjct: 296 CFHCRKSGHNLSDCPE-----LQSEQAGTGICFKCGSTEHTHFECKVAKPT-EFRYATCF 349
Query: 281 ICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
ICR GH+ C N P C CG + H
Sbjct: 350 ICREQGHIAKQCPDNPKGVYPQGGCCKICGDVTH 383
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 39/104 (37%), Gaps = 13/104 (12%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVK---RKKPCFVCGSLEHGVRQCSKAQD--------CFI 227
G C+ CG H C+ A R CF+C H +QC C I
Sbjct: 318 GTGICFKCGSTEHTHFECKVAKPTEFRYATCFICREQGHIAKQCPDNPKGVYPQGGCCKI 377
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSL 271
C H KDCPD K +N ++ D+ S N++ L
Sbjct: 378 CGDVTHLKKDCPDLIKEKEENTITVNTIANT--DIESLENNFVL 419
>gi|118353410|ref|XP_001009973.1| Zinc knuckle family protein [Tetrahymena thermophila]
gi|89291740|gb|EAR89728.1| Zinc knuckle family protein [Tetrahymena thermophila SB210]
Length = 612
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 64/159 (40%), Gaps = 40/159 (25%)
Query: 168 RGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSL--EHGVRQCSKAQDC 225
+ RYF + TC C ++GH C VK VC + +H RQC + + C
Sbjct: 306 KNNRYFQQEQKPQMTCRRCKQQGHFERMCMLEVKD-----VCNNCLGDHFARQCQQ-KIC 359
Query: 226 FICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC----RNSYS----------- 270
+ C + GH + +CP QN Q C +C GH C NSYS
Sbjct: 360 YSCSQFGHASANCPK------QNQQKCSRCQKPGHIKADCGAIFMNSYSKYKQNTPFNGI 413
Query: 271 ------LDDLKEVQCYICRCFGHLCCVN----ISDAVPG 299
DD K ++C +C GH C N I D + G
Sbjct: 414 EEEWKKTDDQK-IKCMVCHKKGHSNCKNDYQKIKDDIYG 451
>gi|145229969|ref|XP_001389293.1| zinc knuckle transcription factor (CnjB) [Aspergillus niger CBS
513.88]
gi|134055407|emb|CAK37116.1| unnamed protein product [Aspergillus niger]
Length = 481
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 78/211 (36%), Gaps = 62/211 (29%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHR 234
P DR C NCG GH A C+ + ++ GV+ C C GHR
Sbjct: 265 PYDRQVPKCSNCGVLGHTARGCKEEREERE--------RVGVK-------CVNCSADGHR 309
Query: 235 AKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNIS 294
A+DCP+ ++ F C CG H C N S ++
Sbjct: 310 ARDCPEPRRNVF----ACRNCGAEDHKASECPNPRSAEN--------------------- 344
Query: 295 DAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
V C RC ++GH C QA P +C NCG+E H A++C
Sbjct: 345 ------VECKRCNEMGHFA---KDCPQA----------PPPRTCRNCGSEDHIAKDCDKP 385
Query: 355 ---SKVRKRNIDASTPTFRPHRENKDHSGIK 382
S V RN D R + +D+S +K
Sbjct: 386 RDVSTVTCRNCDEVGHFSRDCPKKRDYSRVK 416
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 11/94 (11%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ----DCFICKKGGHRAKDC 238
C NCG +GH A NC ++ CF CG H +C+K + C IC K GH A +C
Sbjct: 59 CRNCGSDGHFARNCPEP-RKDMACFNCGEDGHNKSECTKPRVFKGACRICNKEGHPAAEC 117
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
P+K VC C GH C+ + D
Sbjct: 118 PEK------GPDVCKNCKMEGHKTMDCKENRRFD 145
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 54/137 (39%), Gaps = 17/137 (12%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ-----DCFICKKGGHRAKD 237
C NC +GH A +C + C CG+ +H +C + +C C + GH AKD
Sbjct: 300 CVNCSADGHRARDCPEPRRNVFACRNCGAEDHKASECPNPRSAENVECKRCNEMGHFAKD 359
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISD 295
CP + C CG H C D+ V C C GH C D
Sbjct: 360 CPQAPP-----PRTCRNCGSEDHIAKDCDKPR---DVSTVTCRNCDEVGHFSRDCPKKRD 411
Query: 296 AVPGEVSCFRCGQLGHT 312
V C CG++GHT
Sbjct: 412 Y--SRVKCNNCGEMGHT 426
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD-----CFICKKGGHRAKD 237
C C E GH A +C A + C CGS +H + C K +D C C + GH ++D
Sbjct: 347 CKRCNEMGHFAKDCPQAPPPRT-CRNCGSEDHIAKDCDKPRDVSTVTCRNCDEVGHFSRD 405
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKE 276
CP K + C CG+ GH + C + + +D +
Sbjct: 406 CPKKRD---YSRVKCNNCGEMGHTIKRCPTANAAEDAPQ 441
>gi|393220397|gb|EJD05883.1| hypothetical protein FOMMEDRAFT_79565 [Fomitiporia mediterranea
MF3/22]
Length = 158
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 42/96 (43%), Gaps = 23/96 (23%)
Query: 181 QTCYNCGEEGHMAVNCRSAVK-----------------RKKPCFVCGSLEHGVRQCSKAQ 223
Q CY C + GH+A NC AV R K CF CG L H R C K
Sbjct: 69 QECYRCSKAGHIARNCPEAVGGGSGGGGGGYGGYNDNMRGKNCFTCGGLGHLSRDCVKGA 128
Query: 224 DCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSG 259
C+ C GH ++DCP + +VC +CG G
Sbjct: 129 KCYNCSGYGHISRDCPKPQQ------RVCYQCGSEG 158
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 63/161 (39%), Gaps = 49/161 (30%)
Query: 187 GEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC------------------------SKA 222
GEEGH++ +C K ++ C+ CG +H R C S
Sbjct: 10 GEEGHVSRDCVGPPKSRE-CYSCGKTDHLARDCPDQPAERGGGYSSFSNNNSSNNNASSI 68
Query: 223 QDCFICKKGGHRAKDCPD-------------KHKSGFQNAQVCLKCGDSGHDMFSCRNSY 269
Q+C+ C K GH A++CP+ + + C CG GH
Sbjct: 69 QECYRCSKAGHIARNCPEAVGGGSGGGGGGYGGYNDNMRGKNCFTCGGLGH--------L 120
Query: 270 SLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLG 310
S D +K +CY C +GH ++ P + C++CG G
Sbjct: 121 SRDCVKGAKCYNCSGYGH---ISRDCPKPQQRVCYQCGSEG 158
>gi|212546049|ref|XP_002153178.1| zinc knuckle nucleic acid binding protein, putative [Talaromyces
marneffei ATCC 18224]
gi|210064698|gb|EEA18793.1| zinc knuckle nucleic acid binding protein, putative [Talaromyces
marneffei ATCC 18224]
Length = 246
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 78/211 (36%), Gaps = 42/211 (19%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
+ CY CG GH A C SA ++ C+ C H C ++ + C+ C+ GH
Sbjct: 6 RACYKCGNIGHYAEVCSSA---ERLCYNCKQPGHESNACPRPRTTETKQCYHCQGLGHVQ 62
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDL--------------------- 274
DCP +G N C CG +GH + +C +
Sbjct: 63 ADCPTLRLNGGANGGRCYSCGQAGHLVRNCPTPNAQPGAGRGSGAPRGNFGGSFRGGFGG 122
Query: 275 --KEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVE 332
+ CY C H D + C+ CG+LGH + C G +
Sbjct: 123 YPRAATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI-------SRDCTAPNGGPLS 171
Query: 333 ASPSSCYNCGAEGHFARECVSSSKVRKRNID 363
++ CY C GH +R+C ++ + + D
Sbjct: 172 SAGKVCYKCSQAGHISRDCPTNENKPQTSTD 202
>gi|322698317|gb|EFY90088.1| zinc knuckle transcription factor (CnjB), putative [Metarhizium
acridum CQMa 102]
Length = 452
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 67/177 (37%), Gaps = 39/177 (22%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAK 236
D G + C NCGE GH + C KK A C C GHR +
Sbjct: 242 DTGLRKCQNCGELGHSSKFCTQEKVEKKA--------------QPAISCSNCGDEGHRIR 287
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDA 296
DCP+ F C CG SGH C +L+++ +C C GH+
Sbjct: 288 DCPEPRVDKF----ACRNCGKSGHRASDCEEPPNLENM---ECRKCGEKGHM-----GKD 335
Query: 297 VP--GEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
P G +C CGQ GH A+ + +C NC GHF+R+C
Sbjct: 336 CPQGGSRACRNCGQEGHI-----------AKDCDQPRNMDNVTCRNCEKTGHFSRDC 381
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 55/138 (39%), Gaps = 18/138 (13%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA-----QDCFICKKGGHRAK 236
+C NCG+EGH +C K C CG H C + +C C + GH K
Sbjct: 275 SCSNCGDEGHRIRDCPEPRVDKFACRNCGKSGHRASDCEEPPNLENMECRKCGEKGHMGK 334
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNIS 294
DCP ++ C CG GH C ++D+ V C C GH C
Sbjct: 335 DCPQG------GSRACRNCGQEGHIAKDCDQPRNMDN---VTCRNCEKTGHFSRDCPEPK 385
Query: 295 DAVPGEVSCFRCGQLGHT 312
D +V C C + GHT
Sbjct: 386 DW--SKVQCSNCQKFGHT 401
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 44/108 (40%), Gaps = 18/108 (16%)
Query: 177 DRGWQT----CYNCGEEGHMAVNCRSAVKR------KKPCFVCGSLEHGVRQCSKAQD-- 224
D GW C C +EGH NC + CF CG H C +D
Sbjct: 18 DSGWNQPQVKCGACSQEGHEEPNCPNQHTEAGNDDANNKCFNCGETGHRAADCPTPRDTA 77
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
C CKK GH +DCPDK VC CG GH +C N+ ++
Sbjct: 78 CRYCKKEGHMIRDCPDKP------PMVCDNCGQEGHVRKNCENARVIN 119
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 66/157 (42%), Gaps = 20/157 (12%)
Query: 131 QSVIVRKEEQKVETADNGDEGVTTVEISDNIVLRKLLR-----GPRYFD---PPDRGWQT 182
Q + +K + + ++ GDEG + + V + R G R D PP+
Sbjct: 263 QEKVEKKAQPAISCSNCGDEGHRIRDCPEPRVDKFACRNCGKSGHRASDCEEPPNLENME 322
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD-----CFICKKGGHRAKD 237
C CGE+GHM +C R C CG H + C + ++ C C+K GH ++D
Sbjct: 323 CRKCGEKGHMGKDCPQGGSRA--CRNCGQEGHIAKDCDQPRNMDNVTCRNCEKTGHFSRD 380
Query: 238 CPD-KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDD 273
CP+ K S Q C C GH C+ DD
Sbjct: 381 CPEPKDWSKVQ----CSNCQKFGHTKVRCKEPLVADD 413
>gi|328863685|gb|EGG12784.1| hypothetical protein MELLADRAFT_101315 [Melampsora larici-populina
98AG31]
Length = 385
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 56/132 (42%), Gaps = 25/132 (18%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSL-EHGVRQCSKAQDCFICKKGGHRAKDCPD 240
TC C E H A NC + C CG++ EH R C + CF C GH ++ CP
Sbjct: 81 TCTICQEPDHSAKNCEHEL-----CLTCGAIDEHITRLCPVSLVCFACGSRGHLSRHCPS 135
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGE 300
++ + C+KCG + H +C + I RC+ + I + P
Sbjct: 136 SSETRIL-GKDCIKCGSTNHLSLNCPS-------------IWRCYEE---IKIPNRKPKS 178
Query: 301 V--SCFRCGQLG 310
+ SC+ CG G
Sbjct: 179 LVPSCYNCGDNG 190
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 53/134 (39%), Gaps = 25/134 (18%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGD-SGHDMFSCRNSYSLDDLKEVQCYICR 283
C IC++ H AK+C ++CL CG H C S + C+ C
Sbjct: 82 CTICQEPDHSAKNC---------EHELCLTCGAIDEHITRLCPVS--------LVCFACG 124
Query: 284 CFGHLC--CVNISDAVPGEVSCFRCGQLGHTGLHWNS---CMQACARSRGETVEASPSSC 338
GHL C + S+ C +CG H L+ S C + + PS C
Sbjct: 125 SRGHLSRHCPSSSETRILGKDCIKCGSTNHLSLNCPSIWRCYEEIKIPNRKPKSLVPS-C 183
Query: 339 YNCGAEG-HFAREC 351
YNCG G HF EC
Sbjct: 184 YNCGDNGDHFGDEC 197
>gi|296485065|tpg|DAA27180.1| TPA: zinc finger, CCHC domain containing 9 [Bos taurus]
gi|440898449|gb|ELR49947.1| Zinc finger CCHC domain-containing protein 9 [Bos grunniens mutus]
Length = 271
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 14/110 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C +A++ ++ C+ CGS EH + +C D CF+
Sbjct: 129 VCFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 188
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
C + GH ++ CPD K + + C CG H C S + D + V
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGGCRLCGSVEHMKKDCPESQNSDRVVTV 238
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C++ GH DCP ++ +C +CG + H++ C+ +L
Sbjct: 120 RQAAKKNAMVCFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEITKCKAKVDPALG 179
Query: 273 DLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+ +C++C GHL C N C CG + H
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCRLCGSVEH 221
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 46/119 (38%), Gaps = 13/119 (10%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVP 298
K ++ +NA VC C GH + C + ++ CY C H C D
Sbjct: 119 KRQAAKKNAMVCFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEITKCKAKVDPAL 178
Query: 299 GEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
GE CF CG++GH SC + + A C CG+ H ++C S
Sbjct: 179 GEFPFAKCFVCGEMGHLS---RSC-----PDNPKGLYADGGGCRLCGSVEHMKKDCPES 229
>gi|307206122|gb|EFN84202.1| Zinc finger CCHC domain-containing protein 9 [Harpegnathos
saltator]
Length = 404
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 26/128 (20%)
Query: 150 EGVTTVEISDNIVL------RKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRK 203
+GV E+ I L R L R ++ C+NC + GH+ +C R+
Sbjct: 256 KGVPQSEVDIAIKLERRKAERALARAKKFL---------CFNCRKSGHVLSDCPELGGRE 306
Query: 204 KP----CFVCGSLEHGVRQCSKAQD-------CFICKKGGHRAKDCPDKHKSGFQNAQVC 252
+ CF CGS EH +C +D CFIC++ GH + CPD K + + C
Sbjct: 307 EAGTGICFKCGSTEHTHFECKVHKDSTYKYAKCFICREQGHISSQCPDNPKGVYPDGGCC 366
Query: 253 LKCGDSGH 260
CG H
Sbjct: 367 KICGAVTH 374
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
CF C+K GH DCP+ +C KCG + H F C+ + K +C+ICR
Sbjct: 286 CFNCRKSGHVLSDCPELGGREEAGTGICFKCGSTEHTHFECK-VHKDSTYKYAKCFICRE 344
Query: 285 FGHL---CCVNISDAVPGEVSCFRCGQLGH 311
GH+ C N P C CG + H
Sbjct: 345 QGHISSQCPDNPKGVYPDGGCCKICGAVTH 374
>gi|395514375|ref|XP_003761393.1| PREDICTED: zinc finger CCHC domain-containing protein 7
[Sarcophilus harrisii]
Length = 541
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 61/156 (39%), Gaps = 35/156 (22%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
C C+K GH +K+CP Q +VC C + GH + C + LD C++ C
Sbjct: 239 CRNCEKRGHLSKNCPVP-----QKIRVCCLCAERGHIQYDCPARFCLD------CFLPAC 287
Query: 285 FGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPS-------- 336
+ H C S + C RC GH ++C + + T P
Sbjct: 288 YSHKCLERPS----WKKHCERCDMKGHYA---DTCPEIWRQYHLTTKPGPPKRPKTYFGR 340
Query: 337 ----SCYNCGAEGHFARECVSSSKVRKRNIDASTPT 368
CYNC +GH+ EC +R + + PT
Sbjct: 341 SALVYCYNCSRKGHYGYECTE-----RRMLSGTFPT 371
>gi|223994373|ref|XP_002286870.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220978185|gb|EED96511.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 132
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 21/107 (19%)
Query: 180 WQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD--------------- 224
+ CY C ++GH A + K+ C+ CGS EH ++QC+K +
Sbjct: 26 YLICYRCRKQGHSAESSGQKKKQGLICYKCGSTEHRIQQCAKIKSFIKPGQKKIDFGKIG 85
Query: 225 ------CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
C++C K GH + CPD F C +CG+ GH C
Sbjct: 86 VLPFASCYVCNKSGHLSSYCPDSKNGVFPKGGTCNECGEPGHFAADC 132
>gi|171694371|ref|XP_001912110.1| hypothetical protein [Podospora anserina S mat+]
gi|170947134|emb|CAP73939.1| unnamed protein product [Podospora anserina S mat+]
Length = 145
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 17/100 (17%)
Query: 183 CYNCGEEGHMAVNCRSAVK--------------RKKPCFVCGSLEHGVRQCSKAQDCFIC 228
CY CGE GH+A NC+ +K C+ CG + H R C C+ C
Sbjct: 48 CYKCGEVGHIARNCQKGGNSYGGGYNSGYGGNFNQKTCYSCGGMGHLSRDCVNGNKCYNC 107
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNS 268
GH +++CP + G ++C KC SGH C NS
Sbjct: 108 GVSGHLSRECPKESTGG---EKICYKCQQSGHVQSQCPNS 144
>gi|343416638|emb|CCD20307.1| hypothetical protein, conserved in T. vivax, (fragment)
[Trypanosoma vivax Y486]
Length = 241
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 55/131 (41%), Gaps = 24/131 (18%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C+ C + GHM C + CF CG H + C+ CF C GH + +CP K
Sbjct: 78 CFQCHQNGHMMPMCP-----RTRCFNCGHFGHSSQLCASKSVCFHCSMPGHTSTECPRK- 131
Query: 243 KSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVS 302
++C +C + GHDM C S QC++ GHL A EV
Sbjct: 132 ----DMGRLCYRCKEPGHDMAKCPQS--------PQCHMWDQTGHL------VAQCPEVL 173
Query: 303 CFRCGQLGHTG 313
C RC Q GH
Sbjct: 174 CNRCHQKGHMA 184
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 64/172 (37%), Gaps = 53/172 (30%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
TC NC GH+ +C +K C C + GH +DCP +
Sbjct: 8 TCKNCFSTGHLRRDC-PLIK-----------------------CAACSRLGHFKEDCPHR 43
Query: 242 HKSGFQNAQ--VCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPG 299
K ++ +C CG S H C + +K V+C+ C GH+ +
Sbjct: 44 RKRPRPDSDIGICRSCGSSSHAQAKC-----PERIKSVECFQCHQNGHM------MPMCP 92
Query: 300 EVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
CF CG GH+ Q C AS S C++C GH + EC
Sbjct: 93 RTRCFNCGHFGHSS-------QLC---------ASKSVCFHCSMPGHTSTEC 128
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 67/191 (35%), Gaps = 52/191 (27%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP------CFVCGSLEHGVRQCS---KAQDCFICKKGGH 233
C C GH +C KR +P C CGS H +C K+ +CF C + GH
Sbjct: 27 CAACSRLGHFKEDCPHRRKRPRPDSDIGICRSCGSSSHAQAKCPERIKSVECFQCHQNGH 86
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNI 293
CP C CG GH S L K V C+ C GH
Sbjct: 87 MMPMCPRTR---------CFNCGHFGH-------SSQLCASKSV-CFHCSMPGH-----T 124
Query: 294 SDAVP----GEVSCFRCGQLGHTGLHWNSCMQACARS--------RGETVEASPSS-CYN 340
S P G + C+RC + GH M C +S G V P C
Sbjct: 125 STECPRKDMGRL-CYRCKEPGHD-------MAKCPQSPQCHMWDQTGHLVAQCPEVLCNR 176
Query: 341 CGAEGHFAREC 351
C +GH A C
Sbjct: 177 CHQKGHMASTC 187
>gi|155371841|ref|NP_001094525.1| zinc finger CCHC domain-containing protein 9 [Bos taurus]
gi|148877390|gb|AAI46121.1| ZCCHC9 protein [Bos taurus]
Length = 271
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 14/110 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C +A++ ++ C+ CGS EH + +C D CF+
Sbjct: 129 VCFHCRQTGHGIADCPAALENQEMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 188
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
C + GH ++ CPD K + + C CG H C S + D + V
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGGCRLCGSVEHMKKDCPESQNSDRVVTV 238
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C++ GH DCP ++ +C +CG + H++ C+ +L
Sbjct: 120 RQAAKKNAMVCFHCRQTGHGIADCPAALENQEMGTGICYRCGSTEHEITKCKAKVDPALG 179
Query: 273 DLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+ +C++C GHL C N C CG + H
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCRLCGSVEH 221
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVP 298
K ++ +NA VC C +GH + C + ++ CY C H C D
Sbjct: 119 KRQAAKKNAMVCFHCRQTGHGIADCPAALENQEMGTGICYRCGSTEHEITKCKAKVDPAL 178
Query: 299 GEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
GE CF CG++GH SC + + A C CG+ H ++C S
Sbjct: 179 GEFPFAKCFVCGEMGHLS---RSC-----PDNPKGLYADGGGCRLCGSVEHMKKDCPES 229
>gi|322695117|gb|EFY86931.1| hypothetical protein MAC_07048 [Metarhizium acridum CQMa 102]
Length = 156
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 17/99 (17%)
Query: 183 CYNCGEEGHMAVNC--------------RSAVKRKKPCFVCGSLEHGVRQCSKAQDCFIC 228
CY CGE GH+A NC K C+ CG H R+C C+ C
Sbjct: 61 CYKCGEIGHIARNCSKAGGSYGGSFGGGYGGGGAGKTCYSCGGYGHMSRECVNGMKCYNC 120
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
+ GH ++DCP + G ++C KC +GH +C N
Sbjct: 121 GESGHYSRDCPKESSGG---EKICYKCQQAGHVQSACPN 156
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 63/149 (42%), Gaps = 28/149 (18%)
Query: 184 YNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC----------SKAQDCFICKKGGH 233
YNCG EGHM+ +C +K K C+ CG H R+C +++ +C+ C + GH
Sbjct: 10 YNCGGEGHMSRDCSEPMKENKSCYKCGQPGHISRECPLGGAGGASGAQSTECYKCGEIGH 69
Query: 234 RAKDCP----------DKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICR 283
A++C G + C CG GH C N ++CY C
Sbjct: 70 IARNCSKAGGSYGGSFGGGYGGGGAGKTCYSCGGYGHMSRECVNG--------MKCYNCG 121
Query: 284 CFGHLCCVNISDAVPGEVSCFRCGQLGHT 312
GH ++ GE C++C Q GH
Sbjct: 122 ESGHYSRDCPKESSGGEKICYKCQQAGHV 150
>gi|167379639|ref|XP_001735220.1| zinc finger protein cchc domain containing protein [Entamoeba
dispar SAW760]
gi|165902889|gb|EDR28598.1| zinc finger protein cchc domain containing protein, putative
[Entamoeba dispar SAW760]
Length = 164
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 181 QTCYNCGEEGHMAVNC-RSAVKRKKPCFVCGSLEHGVRQCSKAQD-------CFICKKGG 232
+TC+ C + GH NC + A C+ CGS +H +R C + + CF+C + G
Sbjct: 14 KTCFYCRQPGHCLKNCPKKAKGEDSICYNCGSHDHILRDCPEPRTGKLAFSTCFVCHQMG 73
Query: 233 HRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
H ++DCP+ K + C CGD H C N
Sbjct: 74 HISRDCPNNPKGIYPQGGGCRYCGDVNHFAKDCPN 108
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 7/94 (7%)
Query: 221 KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCY 280
K + CF C++ GH K+CP K K +C CG H + C + L C+
Sbjct: 12 KDKTCFYCRQPGHCLKNCPKKAKG---EDSICYNCGSHDHILRDCPEPRT-GKLAFSTCF 67
Query: 281 ICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+C GH+ C N P C CG + H
Sbjct: 68 VCHQMGHISRDCPNNPKGIYPQGGGCRYCGDVNH 101
Score = 38.5 bits (88), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 11/73 (15%)
Query: 182 TCYNCGEEGHMAVNC---RSAVKRKKPCFVCGSLEHGVRQCS--------KAQDCFICKK 230
CYNCG H+ +C R+ CFVC + H R C + C C
Sbjct: 39 ICYNCGSHDHILRDCPEPRTGKLAFSTCFVCHQMGHISRDCPNNPKGIYPQGGGCRYCGD 98
Query: 231 GGHRAKDCPDKHK 243
H AKDCP+K K
Sbjct: 99 VNHFAKDCPNKRK 111
>gi|120843|sp|P24736.3|GAG_HV1U4 RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; Contains:
RecName: Full=Matrix protein p17; Short=MA; Contains:
RecName: Full=Capsid protein p24; Short=CA; Contains:
RecName: Full=Spacer peptide p2; Contains: RecName:
Full=Nucleocapsid protein p7; Short=NC; Contains:
RecName: Full=Spacer peptide p1; Contains: RecName:
Full=p6-gag
gi|328905|gb|AAA75018.1| gag protein [Human immunodeficiency virus 1]
Length = 493
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ + ++ R RGPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 361 EAMSQVQQTSIMMQRGNFRGPRRIK--------CFNCGKEGHLAKNCRAP--RKKGCWKC 410
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 411 GKEGHQMKDCTERQANFLGK 430
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C G GH A A+ + + + ++ G + + CF C K GH AK+C
Sbjct: 346 CQGVGGPGHKARVLAEAMSQVQQTSIM--MQRGNFRGPRRIKCFNCGKEGHLAKNCRAPR 403
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 404 KKG------CWKCGKEGHQMKDC 420
>gi|410948894|ref|XP_003981162.1| PREDICTED: zinc finger CCHC domain-containing protein 9 [Felis
catus]
Length = 271
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C +A++ + C+ CGS EH + +C D CF+
Sbjct: 129 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 188
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
C + GH ++ CPD K + + C CG H C S + D + V
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGCCRLCGSVEHFKKDCPESQNSDRMVTV 238
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C+K GH DCP ++ +C +CG + H++ C+ +L
Sbjct: 120 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 179
Query: 273 DLKEVQCYICRCFGHL--CCVNISDAVPGEVSCFR-CGQLGH 311
+ +C++C GHL C + + + C R CG + H
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGCCRLCGSVEH 221
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVP 298
K ++ +NA VC C GH + C + D+ CY C H C D
Sbjct: 119 KRQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPAL 178
Query: 299 GEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
GE CF CG++GH SC + + A C CG+ HF ++C S
Sbjct: 179 GEFPFAKCFVCGEMGHLS---RSC-----PDNPKGLYADGGCCRLCGSVEHFKKDCPES 229
>gi|357168159|ref|XP_003581512.1| PREDICTED: uncharacterized protein LOC100826202 [Brachypodium
distachyon]
Length = 422
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 55/132 (41%), Gaps = 24/132 (18%)
Query: 206 CFVCGSLEHGVRQCS------KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSG 259
CF+C S +H + C K + C +C++ GH K+CP+K + + C CG SG
Sbjct: 73 CFICKSTDHVAKTCPEKSLWDKNKICLLCRERGHSLKNCPEKSDGDLK--KFCYNCGGSG 130
Query: 260 HDMFSCRNS---------YSLDDL----KEVQCYICRCFGHL---CCVNISDAVPGEVSC 303
H + C + L D C++C+ GHL C N P C
Sbjct: 131 HSLSKCPKPIENGTLHPHFLLIDFAGGTNFASCFVCKQQGHLSKDCPENKHGIYPKGGCC 190
Query: 304 FRCGQLGHTGLH 315
CG++ H H
Sbjct: 191 KVCGEVTHLARH 202
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 41/99 (41%), Gaps = 12/99 (12%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKK--PCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
CYNCG GH C ++ P F+ G S CF+CK+ GH +KDCP+
Sbjct: 123 CYNCGGSGHSLSKCPKPIENGTLHPHFLLIDFAGGTNFAS----CFVCKQQGHLSKDCPE 178
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNS------YSLDD 273
+ C CG+ H C N YS DD
Sbjct: 179 NKHGIYPKGGCCKVCGEVTHLARHCPNKRQQDFMYSRDD 217
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 57/144 (39%), Gaps = 30/144 (20%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
CFICK H AK CP+ KS + ++CL C + GH + +C S DLK+ CY C
Sbjct: 73 CFICKSTDHVAKTCPE--KSLWDKNKICLLCRERGHSLKNCPEK-SDGDLKKF-CYNCGG 128
Query: 285 FG-----------------HLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSR 327
G H ++ + SCF C Q GH + C ++
Sbjct: 129 SGHSLSKCPKPIENGTLHPHFLLIDFAGGT-NFASCFVCKQQGHLS-------KDCPENK 180
Query: 328 GETVEASPSSCYNCGAEGHFAREC 351
+ C CG H AR C
Sbjct: 181 -HGIYPKGGCCKVCGEVTHLARHC 203
>gi|432846337|ref|XP_004065887.1| PREDICTED: zinc finger CCHC domain-containing protein 7-like
[Oryzias latipes]
Length = 592
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 61/170 (35%), Gaps = 60/170 (35%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C NC + GH++ NC K+ PCF+CG+ GH +CP+KH
Sbjct: 296 CKNCNKTGHLSKNCPEP-KKLVPCFLCGA-------------------PGHLVIECPNKH 335
Query: 243 KSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVS 302
C CG GH SC S QC+ C GH ++ + P
Sbjct: 336 ---------CNNCGHPGHLFNSC----SEKPYWYKQCHRCSMKGHF--LDTENGPP---- 376
Query: 303 CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECV 352
+ + E + SP+ CYNC +GHF C
Sbjct: 377 ---------------------VKKQAEDMGRSPAYCYNCSKKGHFGYACT 405
>gi|170778684|gb|ACB36742.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 10/81 (12%)
Query: 150 EGVTTVEISDNIVLRKL-LRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFV 208
E ++ V S NI+++K R PR C+NCG+EGH+A NCR+A RKK C+
Sbjct: 365 EAMSQVTNSANIMMQKSSFRSPRKIV-------KCFNCGKEGHIARNCRAA--RKKGCWK 415
Query: 209 CGSLEHGVRQCSKAQDCFICK 229
CG H ++ C++ Q F+ K
Sbjct: 416 CGKEGHQMKDCTERQANFLGK 436
>gi|336372146|gb|EGO00486.1| hypothetical protein SERLA73DRAFT_136388 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384888|gb|EGO26036.1| hypothetical protein SERLADRAFT_466996 [Serpula lacrymans var.
lacrymans S7.9]
Length = 330
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 16/99 (16%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP------CFVCGSLEHGVRQCSKAQD---------CFI 227
C+ C ++GH A +C +A + +K C+ CGS H + +C K +D CF+
Sbjct: 152 CFACRKKGHAARDCPTATEGRKNNKIVGICYRCGSSRHNLARCKKPEDPLNPLPFASCFV 211
Query: 228 CKKGGHRAKDCP-DKHKSGFQNAQVCLKCGDSGHDMFSC 265
C GH A CP +K + + + C CGD+ H +C
Sbjct: 212 CSGKGHLASSCPKNKERGIYPDGGCCKLCGDTTHLAKNC 250
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQN--AQVCLKCGDSGHDMFSCRNSY-SLDDLKEVQCYI 281
CF C+K GH A+DCP + N +C +CG S H++ C+ L+ L C++
Sbjct: 152 CFACRKKGHAARDCPTATEGRKNNKIVGICYRCGSSRHNLARCKKPEDPLNPLPFASCFV 211
Query: 282 CRCFGHL---CCVNISDAV-PGEVSCFRCGQLGH 311
C GHL C N + P C CG H
Sbjct: 212 CSGKGHLASSCPKNKERGIYPDGGCCKLCGDTTH 245
>gi|409684246|gb|AFV34170.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K + +GP+ CYNCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGIFKGPKRIK--------CYNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C G H A A+ + + + ++ G+ + K C+ C K GH A++C
Sbjct: 350 CQGVGGPSHKARVLAEAMSQAQQTNIM--MQKGIFKGPKRIKCYNCGKEGHLARNCRAPR 407
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 408 KKG------CWKCGKEGHQMKDC 424
>gi|355729967|gb|AES10044.1| zinc finger, CCHC domain containing 9 [Mustela putorius furo]
Length = 270
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C +A++ + C+ CGS EH + +C D CF+
Sbjct: 129 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 188
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
C + GH ++ CPD K + + C CG H C S + D + V
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGCCRLCGSVDHFKKDCPESQNSDRMVTV 238
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C+K GH DCP ++ +C +CG + H++ C+ +L
Sbjct: 120 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 179
Query: 273 DLKEVQCYICRCFGHL--CCVNISDAVPGEVSCFR-CGQLGH 311
+ +C++C GHL C + + + C R CG + H
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGCCRLCGSVDH 221
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVP 298
K ++ +NA VC C GH + C + D+ CY C H C D
Sbjct: 119 KRQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPAL 178
Query: 299 GEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
GE CF CG++GH SC + + A C CG+ HF ++C S
Sbjct: 179 GEFPFAKCFVCGEMGHLS---RSC-----PDNPKGLYADGGCCRLCGSVDHFKKDCPES 229
>gi|395825575|ref|XP_003786003.1| PREDICTED: zinc finger CCHC domain-containing protein 9 [Otolemur
garnettii]
Length = 271
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C +A++ + C+ CGS EH + +C D CF+
Sbjct: 129 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPAFGEFPFAKCFV 188
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
C + GH ++ CPD K + + C CG H C S + D + V
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGGCKLCGSVKHLKKDCPESQNSDQMVTV 238
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C+K GH DCP ++ +C +CG + H++ C+ +
Sbjct: 120 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPAFG 179
Query: 273 DLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+ +C++C GHL C N C CG + H
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVKH 221
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 13/119 (10%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVP 298
K ++ +NA VC C GH + C + D+ CY C H C D
Sbjct: 119 KRQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPAF 178
Query: 299 GEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
GE CF CG++GH SC + + A C CG+ H ++C S
Sbjct: 179 GEFPFAKCFVCGEMGHLS---RSC-----PDNPKGLYADGGGCKLCGSVKHLKKDCPES 229
>gi|392568213|gb|EIW61387.1| hypothetical protein TRAVEDRAFT_63183 [Trametes versicolor
FP-101664 SS1]
Length = 687
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 75/191 (39%), Gaps = 21/191 (10%)
Query: 182 TCYNCGEEG-HMAVNCRSAVKRKKPCFVCGSL-EHGVRQCSKAQDCFICKKGGHRAKDCP 239
C NCG EG H C + C CG+ EH R C ++ CF C GH + CP
Sbjct: 330 VCKNCGAEGEHKTFECPVLI-----CLTCGARDEHSTRSCPISKTCFTCGMKGHINRTCP 384
Query: 240 DKHKS---GFQNAQVCLKCGDSGHDMFSCRNSYSLDDL--KEVQCYICRCFGHLCCVNIS 294
++ + + + Q C +CG H C + + + E + I R + +
Sbjct: 385 NRAATRAGAYSHYQDCDRCGARTHQTNECPTLWRIYEYVADEERHEILRERDAKRTLALG 444
Query: 295 DAVPGEVS----CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARE 350
+ G ++ C+ CG GH G N + R E S S YN G F+ E
Sbjct: 445 EGGEGYIATDEWCYNCGGSGHLGDDCNDRPKMFDAPR----EPSAFSIYNI-LSGPFSSE 499
Query: 351 CVSSSKVRKRN 361
S+ R+
Sbjct: 500 ASRPSQRAPRD 510
>gi|57084761|ref|XP_536305.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 2
[Canis lupus familiaris]
Length = 271
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 14/111 (12%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CF 226
C++C + GH +C +A++ + C+ CGS EH + +C D CF
Sbjct: 128 MVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCF 187
Query: 227 ICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
+C + GH ++ CPD K + + C CG H C S + D + V
Sbjct: 188 VCGEMGHLSRSCPDNPKGLYADGGCCRLCGSVEHFKKDCPESQNSDRMVTV 238
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C+K GH DCP ++ +C +CG + H++ C+ +L
Sbjct: 120 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 179
Query: 273 DLKEVQCYICRCFGHL--CCVNISDAVPGEVSCFR-CGQLGH 311
+ +C++C GHL C + + + C R CG + H
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGCCRLCGSVEH 221
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVP 298
K ++ +NA VC C GH + C + D+ CY C H C D
Sbjct: 119 KRQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPAL 178
Query: 299 GEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
GE CF CG++GH SC + + A C CG+ HF ++C S
Sbjct: 179 GEFPFAKCFVCGEMGHLS---RSC-----PDNPKGLYADGGCCRLCGSVEHFKKDCPES 229
>gi|242035205|ref|XP_002464997.1| hypothetical protein SORBIDRAFT_01g030150 [Sorghum bicolor]
gi|241918851|gb|EER91995.1| hypothetical protein SORBIDRAFT_01g030150 [Sorghum bicolor]
Length = 261
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 71/188 (37%), Gaps = 37/188 (19%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C NC GH A +C S C CG H +CS C+ CK+ GH A CP
Sbjct: 41 CNNCKRPGHFARDCPSVAV----CHTCGLPGHIAAECSSKGICWNCKEPGHMANSCP--- 93
Query: 243 KSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVS 302
N +C CG SGH C + + + + C C GH + E +
Sbjct: 94 -----NEGICRNCGKSGHIARDC-TAPPVPPGEVILCSNCYKPGHF-----REECTNEKA 142
Query: 303 CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVRKRNI 362
C C Q GH +R T + C C GH AREC S K+ +R
Sbjct: 143 CNNCRQSGHI-------------ARNCTND---PVCNLCNVAGHLARECPKSDKLGER-- 184
Query: 363 DASTPTFR 370
P FR
Sbjct: 185 -GGPPPFR 191
>gi|194220088|ref|XP_001504692.2| PREDICTED: zinc finger CCHC domain-containing protein 9-like [Equus
caballus]
Length = 271
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 14/105 (13%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C +A++ C+ CGS EH + +C D CF+
Sbjct: 129 VCFHCRKPGHGVADCPAALENHDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 188
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
C + GH ++ CPD K + + C CG H C S + D
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGCCRLCGSVAHFQKDCPESQNSD 233
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C+K GH DCP ++ +C +CG + H++ C+ +L
Sbjct: 120 RQAAKKNAMVCFHCRKPGHGVADCPAALENHDMGTGICYRCGSTEHEITKCKAKVDPALG 179
Query: 273 DLKEVQCYICRCFGHL--CCVNISDAVPGEVSCFR-CGQLGH 311
+ +C++C GHL C + + + C R CG + H
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGCCRLCGSVAH 221
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVP 298
K ++ +NA VC C GH + C + D+ CY C H C D
Sbjct: 119 KRQAAKKNAMVCFHCRKPGHGVADCPAALENHDMGTGICYRCGSTEHEITKCKAKVDPAL 178
Query: 299 GEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
GE CF CG++GH SC + + A C CG+ HF ++C S
Sbjct: 179 GEFPFAKCFVCGEMGHLS---RSC-----PDNPKGLYADGGCCRLCGSVAHFQKDCPES 229
>gi|6324074|ref|NP_014144.1| Gis2p [Saccharomyces cerevisiae S288c]
gi|1730843|sp|P53849.1|GIS2_YEAST RecName: Full=Zinc finger protein GIS2
gi|1255963|emb|CAA65489.1| unnamed protein product [Saccharomyces cerevisiae]
gi|1302303|emb|CAA96162.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45269894|gb|AAS56328.1| YNL255C [Saccharomyces cerevisiae]
gi|151944292|gb|EDN62570.1| gig suppressor [Saccharomyces cerevisiae YJM789]
gi|190409228|gb|EDV12493.1| zinc-finger protein GIS2 [Saccharomyces cerevisiae RM11-1a]
gi|256272390|gb|EEU07373.1| Gis2p [Saccharomyces cerevisiae JAY291]
gi|285814410|tpg|DAA10304.1| TPA: Gis2p [Saccharomyces cerevisiae S288c]
gi|323303323|gb|EGA57119.1| Gis2p [Saccharomyces cerevisiae FostersB]
gi|323307479|gb|EGA60750.1| Gis2p [Saccharomyces cerevisiae FostersO]
gi|323335863|gb|EGA77141.1| Gis2p [Saccharomyces cerevisiae Vin13]
gi|349580694|dbj|GAA25853.1| K7_Gis2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392297096|gb|EIW08197.1| Gis2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 153
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 10/130 (7%)
Query: 183 CYNCGEEGHMAVNCRSA-VKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
CYNC + GH+ +C K C+ CG H +C+ Q CF C + GH +++CP+
Sbjct: 25 CYNCNKPGHVQTDCTMPRTVEFKQCYNCGETGHVRSECT-VQRCFNCNQTGHISRECPEP 83
Query: 242 HKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEV 301
K+ + C KCG H C D + ++CY C GH+ S +
Sbjct: 84 KKTSRFSKVSCYKCGGPNHMAKDCMKE---DGISGLKCYTCGQAGHM-----SRDCQNDR 135
Query: 302 SCFRCGQLGH 311
C+ C + GH
Sbjct: 136 LCYNCNETGH 145
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 63/158 (39%), Gaps = 38/158 (24%)
Query: 203 KKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDM 262
+K C+VCG + H C + C+ C K GH DC F+ C CG++GH
Sbjct: 3 QKACYVCGKIGHLAEDCDSERLCYNCNKPGHVQTDCTMPRTVEFKQ---CYNCGETGHVR 59
Query: 263 FSCRNSYSLDDLKEVQ-CYICRCFGHLCCVNISDAVP--------GEVSCFRCGQLGHTG 313
C VQ C+ C GH IS P +VSC++CG H
Sbjct: 60 SEC----------TVQRCFNCNQTGH-----ISRECPEPKKTSRFSKVSCYKCGGPNHMA 104
Query: 314 LHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
+ C + G S CY CG GH +R+C
Sbjct: 105 -------KDCMKEDG----ISGLKCYTCGQAGHMSRDC 131
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 182 TCYNCGEEGHMAVNCR-----SAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAK 236
+CY CG HMA +C S +K C+ CG H R C + C+ C + GH +K
Sbjct: 93 SCYKCGGPNHMAKDCMKEDGISGLK----CYTCGQAGHMSRDCQNDRLCYNCNETGHISK 148
Query: 237 DCP 239
DCP
Sbjct: 149 DCP 151
>gi|357114909|ref|XP_003559236.1| PREDICTED: DNA-binding protein HEXBP-like [Brachypodium distachyon]
Length = 301
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 80/198 (40%), Gaps = 44/198 (22%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
TC NC GH A C S K C+ C H +C+ C C K GH A+DCP
Sbjct: 125 TCNNCNLPGHFAAECTS----KTVCWNCKKSGHIATECTNEALCHTCSKSGHLARDCP-- 178
Query: 242 HKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV-----------QCYICRCFGHL-- 288
SG +A++C C GH C N + ++ ++ C +C GHL
Sbjct: 179 -TSG--SAKLCNNCFQPGHIAVDCTNDRACNNCRQSGHIARECTNDPVCNLCNVSGHLAR 235
Query: 289 CC--VNISDAVPG----EVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCG 342
C ++ + G ++ C CGQ GH +R+ TV C CG
Sbjct: 236 ACPKTTLASEIHGGPFRDILCRMCGQPGHI-----------SRNCMATV-----ICDTCG 279
Query: 343 AEGHFARECVSSSKVRKR 360
GH + EC S+ +R
Sbjct: 280 GRGHMSYECPSARVFDRR 297
>gi|145518073|ref|XP_001444914.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412347|emb|CAK77517.1| unnamed protein product [Paramecium tetraurelia]
Length = 243
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP--CFVCGSLEHGVRQCSKAQD-------CFICKKGG 232
C C + GH A +CR V+ C+ CGS +H ++ C K + CF+CK+ G
Sbjct: 128 VCLVCKKVGHTAQHCRENVQPTTDVICYNCGSQKHTLKDCQKPKSGSLKFATCFVCKEAG 187
Query: 233 HRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
H ++DCP K + C C + H +C
Sbjct: 188 HISRDCPKNPKGLYAYGGGCYICSSTHHTQANC 220
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 39/96 (40%), Gaps = 16/96 (16%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQ-----VCLKCGDSGHDMFSCRNSYSLDDLKEVQC 279
C +CKK GH A+ C +N Q +C CG H + C+ S LK C
Sbjct: 129 CLVCKKVGHTAQHC-------RENVQPTTDVICYNCGSQKHTLKDCQKPKS-GSLKFATC 180
Query: 280 YICRCFGHL---CCVNISDAVPGEVSCFRCGQLGHT 312
++C+ GH+ C N C+ C HT
Sbjct: 181 FVCKEAGHISRDCPKNPKGLYAYGGGCYICSSTHHT 216
>gi|301761700|ref|XP_002916268.1| PREDICTED: zinc finger CCHC domain-containing protein 9-like
[Ailuropoda melanoleuca]
gi|281350303|gb|EFB25887.1| hypothetical protein PANDA_004333 [Ailuropoda melanoleuca]
Length = 271
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C +A++ + C+ CGS EH + +C D CF+
Sbjct: 129 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCRAKVDPALGEFPFAKCFV 188
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
C + GH ++ CPD K + + C CG H C S + D + V
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGCCRLCGSVEHFKKDCPESQNSDRMVTV 238
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C+K GH DCP ++ +C +CG + H++ CR +L
Sbjct: 120 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCRAKVDPALG 179
Query: 273 DLKEVQCYICRCFGHL--CCVNISDAVPGEVSCFR-CGQLGH 311
+ +C++C GHL C + + + C R CG + H
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGCCRLCGSVEH 221
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVP 298
K ++ +NA VC C GH + C + D+ CY C H C D
Sbjct: 119 KRQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCRAKVDPAL 178
Query: 299 GEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
GE CF CG++GH SC + + A C CG+ HF ++C S
Sbjct: 179 GEFPFAKCFVCGEMGHLS---RSC-----PDNPKGLYADGGCCRLCGSVEHFKKDCPES 229
>gi|169604969|ref|XP_001795905.1| hypothetical protein SNOG_05500 [Phaeosphaeria nodorum SN15]
gi|111065444|gb|EAT86564.1| hypothetical protein SNOG_05500 [Phaeosphaeria nodorum SN15]
Length = 458
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 73/177 (41%), Gaps = 38/177 (21%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAK 236
D G C NCGE GH+ +C+ V + S++ GV +C CK+ GHRA+
Sbjct: 255 DIGVPLCGNCGELGHIRKHCKQEVPEEV------SVQPGV-------ECVYCKEPGHRAR 301
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNIS 294
DCP + + F C C GH+ C S ++ V+C C GH C N++
Sbjct: 302 DCPKERINPF----ACKNCKQEGHNSKECPEPRSAEN---VECRKCNETGHFSKDCPNVA 354
Query: 295 DAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
+ +C C H A+ E C NC GHF+++C
Sbjct: 355 -----KRTCRNCDSEDHV-----------AKECPEPRNPEKQQCRNCEKFGHFSKDC 395
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 12/97 (12%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA-----QDCFICKKGGHRAKD 237
C C E GH + +C + KR C C S +H ++C + Q C C+K GH +KD
Sbjct: 337 CRKCNETGHFSKDCPNVAKRT--CRNCDSEDHVAKECPEPRNPEKQQCRNCEKFGHFSKD 394
Query: 238 CPD-KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDD 273
CP+ K S Q C C GH + C+ + D
Sbjct: 395 CPEPKDWSKIQ----CNNCQQFGHTIKRCKEPIAEGD 427
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 6/92 (6%)
Query: 223 QDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYIC 282
+ C IC + GH A++CPDK + G + C CG GH+ C N + C C
Sbjct: 38 ETCRICNQTGHFARECPDKPEGGGLTGE-CFNCGQVGHNKADCTNERVERPFNGI-CNSC 95
Query: 283 RCFGHLCCVNISDAVPGEVSCFRCGQLGHTGL 314
GH + + C C Q GH L
Sbjct: 96 GVEGH----SARTCPTNPMKCKLCDQEGHKAL 123
>gi|396477991|ref|XP_003840426.1| similar to zinc knuckle domain-containing protein [Leptosphaeria
maculans JN3]
gi|312216998|emb|CBX96947.1| similar to zinc knuckle domain-containing protein [Leptosphaeria
maculans JN3]
Length = 196
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 72/180 (40%), Gaps = 53/180 (29%)
Query: 171 RYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK--------- 221
R + P +G TCYNCGE+GH++ C S + +K C+ CG H R+C+K
Sbjct: 24 RAAECPTKGTPTCYNCGEKGHVSRECTSP-QAEKTCYRCGGTGHISRECTKDGGAQMGGR 82
Query: 222 -----AQDCFICKKGGHRAKDCPDKHKSGFQNAQ---------------------VCLKC 255
Q+C+ C + GH A++C G Q C C
Sbjct: 83 GGGSGGQECYKCGQQGHIARNCSQGGGYGGQQQGGYGGRGGYGGGQGGYGGARQTTCYSC 142
Query: 256 GDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVS----CFRCGQLGH 311
G GH S D + +CY C GHL S P E S C+RC Q GH
Sbjct: 143 GGFGH--------MSRDCTQGQKCYNCGEVGHL-----SRDCPQETSSERVCYRCKQPGH 189
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 48/112 (42%), Gaps = 29/112 (25%)
Query: 181 QTCYNCGEEGHMAVNC-------------------------RSAVKRKKPCFVCGSLEHG 215
Q CY CG++GH+A NC R+ C+ CG H
Sbjct: 89 QECYKCGQQGHIARNCSQGGGYGGQQQGGYGGRGGYGGGQGGYGGARQTTCYSCGGFGHM 148
Query: 216 VRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
R C++ Q C+ C + GH ++DCP + S +VC +C GH +C N
Sbjct: 149 SRDCTQGQKCYNCGEVGHLSRDCPQETSS----ERVCYRCKQPGHVQSACPN 196
>gi|328834534|gb|AEB52933.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 12/79 (15%)
Query: 150 EGVTTVEISDNIVLRKL-LRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFV 208
E ++ V+ S NI+++K RGPR C+NCG+EGH+A NCR+ RKK C+
Sbjct: 365 EAMSQVQ-STNIMMQKSNFRGPRRIK--------CFNCGKEGHLARNCRAP--RKKGCWK 413
Query: 209 CGSLEHGVRQCSKAQDCFI 227
CG H ++ C++ Q F+
Sbjct: 414 CGKEGHQMKDCTERQANFL 432
>gi|344272696|ref|XP_003408167.1| PREDICTED: zinc finger CCHC domain-containing protein 9-like
[Loxodonta africana]
Length = 270
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C +A++ + C+ CGS EH + +C D CF+
Sbjct: 128 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 187
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
C + GH ++ CPD K + + C CG H C S + D + V
Sbjct: 188 CGEMGHLSRSCPDNPKGLYADGGGCRLCGSVEHYKKDCPESKNSDQIVTV 237
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C+K GH DCP ++ +C +CG + H++ C+ +L
Sbjct: 119 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 178
Query: 273 DLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+ +C++C GHL C N C CG + H
Sbjct: 179 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCRLCGSVEH 220
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVP 298
K ++ +NA VC C GH + C + D+ CY C H C D
Sbjct: 118 KRQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPAL 177
Query: 299 GEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
GE CF CG++GH SC + + A C CG+ H+ ++C S
Sbjct: 178 GEFPFAKCFVCGEMGHLS---RSC-----PDNPKGLYADGGGCRLCGSVEHYKKDCPES 228
>gi|429249296|gb|AFZ77692.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 11/81 (13%)
Query: 150 EGVTTVEISDNIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFV 208
E ++ + NI+++K + +GP+ C+NCG+EGH+A NCR+ RKK C+
Sbjct: 365 EAMSQAQQHTNIMMQKGIFKGPKRIK--------CFNCGKEGHLAKNCRAP--RKKGCWK 414
Query: 209 CGSLEHGVRQCSKAQDCFICK 229
CG H ++ C++ Q F+ K
Sbjct: 415 CGKEGHQMKDCTERQANFLGK 435
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 212 LEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
++ G+ + K CF C K GH AK+C K G C KCG GH M C
Sbjct: 378 MQKGIFKGPKRIKCFNCGKEGHLAKNCRAPRKKG------CWKCGKEGHQMKDC 425
>gi|268560866|ref|XP_002646309.1| Hypothetical protein CBG12016 [Caenorhabditis briggsae]
Length = 785
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ----DCFICKKGGHRAKDC 238
C+NCGEEGH + C + PC C + H C K + C C+K GH AKDC
Sbjct: 636 CHNCGEEGHFSRECPKPKQPNLPCRNCNEVGHFSTDCDKPKVPFGPCRNCQKEGHFAKDC 695
Query: 239 PDKHKSGFQNAQVCLKCGDSGH 260
P++ + + C +C + GH
Sbjct: 696 PEERVR-IEPTEPCRRCNEEGH 716
>gi|320167039|gb|EFW43938.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 357
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 11/96 (11%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKP---CFVCGSLEHGVRQCSKAQD--------CFICK 229
Q C+NC ++GH C++ C+ CGS EH + C CF+C+
Sbjct: 205 QICFNCRKKGHSVSECKAGKTVSDATGLCYACGSTEHTTKSCRVPNPSGAMPFAMCFVCR 264
Query: 230 KGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
K GH +K CPD + + + C C H C
Sbjct: 265 KTGHLSKFCPDNPRGMYPDGGSCTHCTSVRHLAKDC 300
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 4/99 (4%)
Query: 216 VRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLK 275
+R+ Q CF C+K GH +C K+ +C CG + H SCR +
Sbjct: 198 LRRGLSKQICFNCRKKGHSVSEC-KAGKTVSDATGLCYACGSTEHTTKSCRVPNPSGAMP 256
Query: 276 EVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
C++CR GHL C N P SC C + H
Sbjct: 257 FAMCFVCRKTGHLSKFCPDNPRGMYPDGGSCTHCTSVRH 295
>gi|410903994|ref|XP_003965478.1| PREDICTED: zinc finger CCHC domain-containing protein 9-like
[Takifugu rubripes]
Length = 274
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 14/97 (14%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFIC 228
C+NC + GH NC A + ++ C+ CGS EH +++C D CFIC
Sbjct: 135 CFNCRKPGHGLANCPEADRDEEMGRGICYRCGSTEHEIQKCKAKVDPALGEFPYAKCFIC 194
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
+ GH ++ CPD K + C CG H C
Sbjct: 195 GETGHLSRTCPDNPKGLYAQGGCCRVCGSVEHFQKDC 231
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLDDLKEVQCYIC 282
CF C+K GH +CP+ + +C +CG + H++ C+ +L + +C+IC
Sbjct: 135 CFNCRKPGHGLANCPEADRDEEMGRGICYRCGSTEHEIQKCKAKVDPALGEFPYAKCFIC 194
Query: 283 RCFGHL--CCVNISDAVPGEVSCFR-CGQLGH 311
GHL C + + + C R CG + H
Sbjct: 195 GETGHLSRTCPDNPKGLYAQGGCCRVCGSVEH 226
>gi|126321496|ref|XP_001363296.1| PREDICTED: zinc finger CCHC domain-containing protein 9-like
[Monodelphis domestica]
Length = 262
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 14/111 (12%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CF 226
+ CY+C ++GH +C + ++ + C+ CGS EH + +C D CF
Sbjct: 119 KVCYHCRKQGHGVADCPAVLESQDMGTGICYRCGSTEHEITKCKAKVDPAMGEFPFAKCF 178
Query: 227 ICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
IC + GH ++ CPD K + C CG H C + + D + V
Sbjct: 179 ICGEMGHLSRSCPDNPKGLYAEGGGCRLCGSVEHFKKDCPENQNSDHMVTV 229
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 222 AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLDDLKEVQC 279
A+ C+ C+K GH DCP +S +C +CG + H++ C+ ++ + +C
Sbjct: 118 AKVCYHCRKQGHGVADCPAVLESQDMGTGICYRCGSTEHEITKCKAKVDPAMGEFPFAKC 177
Query: 280 YICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+IC GHL C N C CG + H
Sbjct: 178 FICGEMGHLSRSCPDNPKGLYAEGGGCRLCGSVEH 212
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 43/110 (39%), Gaps = 13/110 (11%)
Query: 247 QNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVPGE---V 301
+NA+VC C GH + C D+ CY C H C D GE
Sbjct: 116 KNAKVCYHCRKQGHGVADCPAVLESQDMGTGICYRCGSTEHEITKCKAKVDPAMGEFPFA 175
Query: 302 SCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
CF CG++GH SC + + A C CG+ HF ++C
Sbjct: 176 KCFICGEMGHLS---RSC-----PDNPKGLYAEGGGCRLCGSVEHFKKDC 217
>gi|227058023|gb|ACP18962.1| gag protein [Human immunodeficiency virus 1]
Length = 502
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 366 EAMSQVNSTNVLIQRSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 415
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 416 GKEGHQMKDCTERQANFLGK 435
>gi|118426876|gb|ABK91189.1| gag protein [Human immunodeficiency virus 1]
Length = 152
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + LRGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNLRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|115483228|ref|NP_001065207.1| Os10g0545300 [Oryza sativa Japonica Group]
gi|13357253|gb|AAK20050.1|AC025783_10 putative zinc finger protein [Oryza sativa Japonica Group]
gi|31433361|gb|AAP54880.1| Zinc knuckle family protein, expressed [Oryza sativa Japonica
Group]
gi|113639816|dbj|BAF27121.1| Os10g0545300 [Oryza sativa Japonica Group]
gi|125575582|gb|EAZ16866.1| hypothetical protein OsJ_32342 [Oryza sativa Japonica Group]
gi|215694396|dbj|BAG89389.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768319|dbj|BAH00548.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 247
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 75/208 (36%), Gaps = 52/208 (25%)
Query: 168 RGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFI 227
RGP F P D C NC GH A +C + C CG H +CS C+
Sbjct: 31 RGPSRF-PND----LCNNCKRPGHFARDCPNVAL----CHACGLPGHIAAECSSKDLCWN 81
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGH 287
CK+ GH A CP N +C CG SGH C
Sbjct: 82 CKEPGHMANSCP--------NEGICRNCGKSGHIAREC---------------------- 111
Query: 288 LCCVNISDAVPGEVS-CFRCGQLGHTGLHWNSCMQAC--ARSRGETVEASPSS--CYNCG 342
+ +PGE+ C C + GH + +AC R G P+ C C
Sbjct: 112 ----SAPPMLPGEMRLCSNCYKPGHLAAECTN-EKACNNCRKSGHLARNCPNEPVCNLCN 166
Query: 343 AEGHFARECVSSSKVRKRNIDASTPTFR 370
GH AREC S + +R P FR
Sbjct: 167 VSGHLARECPKSDAINER---GGPPPFR 191
>gi|82568572|dbj|BAE48529.1| gag-pol fusion polyprotein [Human immunodeficiency virus 1]
Length = 881
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C+NCG EGH+A NCR+ RKK C+ CG H ++ C++ Q F + + K
Sbjct: 390 CFNCGREGHLARNCRAP--RKKGCWKCGKEGHQMKDCTERQANFFRENLAFQGKAGELSS 447
Query: 243 KSGFQNAQVCLKCGDSGHDMF 263
+ N+ K GD G D F
Sbjct: 448 EQTRANSPTSRKLGDGGRDNF 468
>gi|17532917|ref|NP_494168.1| Protein F07E5.5 [Caenorhabditis elegans]
gi|351065298|emb|CCD61275.1| Protein F07E5.5 [Caenorhabditis elegans]
Length = 384
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
Query: 182 TCYNCGEEGHMAVNC--RSAVKRKKPCFVCGSLEHGVRQCSKA-------QDCFICKKGG 232
C++C E GH +C R++ CF CGS+EH + +C K CF+CK+ G
Sbjct: 230 ACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVG 289
Query: 233 HRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
H ++DC + + C CG + H C
Sbjct: 290 HISRDCHQNVNGVYPDGGCCNVCGANTHLRRDC 322
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
CF C++ GHR DCP ++ S VC KCG H + C+ + C++C+
Sbjct: 231 CFHCREPGHRLADCPKRNSSSSDG--VCFKCGSMEHSIHECKKK-GVKGFPYATCFVCKQ 287
Query: 285 FGHL---CCVNISDAVPGEVSCFRCGQLGH 311
GH+ C N++ P C CG H
Sbjct: 288 VGHISRDCHQNVNGVYPDGGCCNVCGANTH 317
>gi|56266772|gb|AAV85016.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 11/81 (13%)
Query: 150 EGVTTVEISDNIVL-RKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFV 208
EG++ V+ + NI++ R +RG + C+NCG+EGH+A NCR+ RKK C+
Sbjct: 365 EGMSQVQNTTNIMMQRSNIRGQKRIK--------CFNCGKEGHLARNCRAP--RKKGCWK 414
Query: 209 CGSLEHGVRQCSKAQDCFICK 229
CG H ++ C++ Q F+ K
Sbjct: 415 CGKEGHQMKNCTERQANFLGK 435
>gi|449664234|ref|XP_002161873.2| PREDICTED: probable ATP-dependent RNA helicase DDX4 [Hydra
magnipapillata]
Length = 815
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 59/171 (34%), Gaps = 58/171 (33%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
+ C+ CG+EGHM+ C + CF CK+ GH ++DCP
Sbjct: 70 RACHKCGKEGHMSRECPDGGGG-----------------GGGRACFKCKQEGHMSRDCP- 111
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGE 300
+ G + C KCG GH C D G
Sbjct: 112 --QGGSGGGRACHKCGKEGHMSREC----------------------------PDGGGGG 141
Query: 301 VSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
+CF+C Q GH C Q T C+ CG EGH +REC
Sbjct: 142 RACFKCKQEGHMS---KDCPQGGGGGGSRT-------CHKCGKEGHMSREC 182
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK------AQDCFICKKGG 232
G + C+ CG+EGHM+ C + CF C H + C + ++ C C K G
Sbjct: 117 GGRACHKCGKEGHMSRECPDGGGGGRACFKCKQEGHMSKDCPQGGGGGGSRTCHKCGKEG 176
Query: 233 HRAKDCPD 240
H +++CPD
Sbjct: 177 HMSRECPD 184
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
C ICK+ GH AKDCPDK C +CG+SGH C
Sbjct: 278 CRICKQSGHFAKDCPDKKP----RDDTCRRCGESGHFAKDC 314
>gi|227057985|gb|ACP18949.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQQTNIMMQRGNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|429249200|gb|AFZ77644.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K + +GPR C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGIFKGPRRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
>gi|380479291|emb|CCF43107.1| hypothetical protein CH063_12905 [Colletotrichum higginsianum]
Length = 221
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQC--SKAQDCFICKKGGHR 234
+ C+NCG+ GH +C +KP C CG H R+C + A C +C + GH
Sbjct: 45 RACFNCGQSGHSKADCPEP---RKPFDGTCRGCGQEGHTRRECPDTPAMTCRVCGEEGHI 101
Query: 235 AKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
+DCP K VC C + GHD+ C+ +D
Sbjct: 102 RRDCPQK------PPDVCRNCHEEGHDVVDCKAPRKID 133
>gi|334332857|ref|XP_001371618.2| PREDICTED: zinc finger CCHC domain-containing protein 7-like
[Monodelphis domestica]
Length = 426
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 75/195 (38%), Gaps = 36/195 (18%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
C C+K GH +K+CP Q + C C + GH + C + + LD C + C
Sbjct: 241 CRNCEKRGHLSKNCPIP-----QKIRACCLCAERGHLQYDCPSRFCLD------CSLPAC 289
Query: 285 FGHLCCVNISDAVPGEVSCFRCGQLGHTG---------LHWNSCMQACARSRGETVEASP 335
+ H C S + C RC GH H + R + ++
Sbjct: 290 YSHKCLERPS----WKKHCERCDMKGHYADTCPEIWRQYHLTTKPGPPKRPKTYLGRSAL 345
Query: 336 SSCYNCGAEGHFARECVSSSKVRKRNIDASTPTFRPHRENKDHSGIKSAPHDLGKVHKRK 395
CYNC +GH+ EC +R + + PT P D HD+ +R
Sbjct: 346 VYCYNCSRKGHYGYEC-----TERRMLSGTFPTV-PFIYYYDKE------HDIQDQEQRI 393
Query: 396 KTQHEERGIMTSRKS 410
+ + E MTS+K+
Sbjct: 394 QWKVEATAYMTSKKT 408
>gi|321469269|gb|EFX80250.1| putative germ-line specific RNA helicase vasa protein [Daphnia
pulex]
Length = 761
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 58/143 (40%), Gaps = 18/143 (12%)
Query: 181 QTCYNCGEEGHMAVNC----RSAVKRKKPCFVCGSLEHGVRQCSKA-------QDCFICK 229
+ CY CGEEGHM+ C + C C H R C + C C+
Sbjct: 129 RACYKCGEEGHMSRECPNSNSGGGGGDRTCHKCQQPGHMARDCPTGGGGGGGDRTCHKCQ 188
Query: 230 KGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC 289
+ GH A+DCP G + C KC ++GH R+ + C C GH+
Sbjct: 189 QPGHMARDCPTGGGGG---DRACHKCQETGH---MARDCPTGGGGGPRTCNKCGDAGHM- 241
Query: 290 CVNISDAVPGEVSCFRCGQLGHT 312
G+ CF+C +LGH+
Sbjct: 242 ARECPSGGGGDTKCFKCYKLGHS 264
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 12/129 (9%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
C+ C + GH +++CP+ + G + C KC GH C + + C+ C+
Sbjct: 131 CYKCGEEGHMSRECPNSNSGGGGGDRTCHKCQQPGHMARDCP-TGGGGGGGDRTCHKCQQ 189
Query: 285 FGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAE 344
GH+ + G+ +C +C + GH AR P +C CG
Sbjct: 190 PGHMARDCPTGGGGGDRACHKCQETGHM-----------ARDCPTGGGGGPRTCNKCGDA 238
Query: 345 GHFARECVS 353
GH AREC S
Sbjct: 239 GHMARECPS 247
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVKRK-KPCFVCGSLEHGVRQCSKA----QDCFICKKGGH 233
G + C+ C E GHMA +C + + C CG H R+C CF C K GH
Sbjct: 204 GDRACHKCQETGHMARDCPTGGGGGPRTCNKCGDAGHMARECPSGGGGDTKCFKCYKLGH 263
Query: 234 RAKDCPDKH 242
K+CPD +
Sbjct: 264 STKECPDPY 272
>gi|71004674|ref|XP_757003.1| hypothetical protein UM00856.1 [Ustilago maydis 521]
gi|46096697|gb|EAK81930.1| hypothetical protein UM00856.1 [Ustilago maydis 521]
Length = 189
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 71/186 (38%), Gaps = 44/186 (23%)
Query: 176 PDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRA 235
P G +CYNCG++GH++ C + K C+ C + GH +
Sbjct: 33 PTAGNPSCYNCGQQGHISSQCGMEAQPKT--------------------CYKCSETGHIS 72
Query: 236 KDCP-DKHKSGFQNAQVCLKCGDSGHDMFSCRNS-------YSLDDLKEVQCYICRCFGH 287
++CP + + C KCG GH +C + + CY C GH
Sbjct: 73 RECPTNPAPAAGGPGGECYKCGQHGHIARACPTAGGSSRGGFGGARSGGRSCYNCGGVGH 132
Query: 288 LC--CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEG 345
L C + + A G C+ C + GH SR E + SCY CG EG
Sbjct: 133 LSRECTSPAGAAAGGQRCYNCNESGHI-------------SR-ECPKPQTKSCYRCGDEG 178
Query: 346 HFAREC 351
H + C
Sbjct: 179 HLSAAC 184
>gi|86277567|gb|ABC88291.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICK 229
C+NCG+EGH+A NCR+ RKK C+ CGS EH ++ C++ Q F+ K
Sbjct: 392 CFNCGKEGHIARNCRAP--RKKGCWKCGSEEHQMKDCTERQANFLGK 436
>gi|213138379|gb|ACJ44848.1| gag protein [Human immunodeficiency virus 1]
Length = 261
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 12/113 (10%)
Query: 120 KKEADKIEIEDQSVIVRKEEQKVET---ADNGDEGVTTVEISDNIVLRKLLRGPRYFDPP 176
K+ DKIE E + ++ ++ T + N E ++ ++ ++ R +GP+
Sbjct: 98 KEALDKIEEEQNKSQQKTKQAEMATGKASQNYAEAMSQANQANMMMQRSNFKGPKRII-- 155
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICK 229
C+NCG+EGH+A NCR+ RKK C+ CG H ++ C++ Q F+ K
Sbjct: 156 -----KCFNCGKEGHIARNCRAP--RKKGCWKCGKEGHQMKDCTERQANFLGK 201
>gi|326513731|dbj|BAJ87884.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 482
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 87/209 (41%), Gaps = 44/209 (21%)
Query: 172 YFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKG 231
Y G TC CG+EGH + C K EH + C +C K
Sbjct: 81 YLQDKKNGVITCLVCGKEGHYSSKCYFKDK-----------EHKL-------ICTVCSKN 122
Query: 232 GHRAKDCPDKHKSGFQNAQVCLKCGDSGHDM----FSCRNSYSLDD-----LKEVQCYIC 282
GH + C ++KS + + C +CG+ GH C + D L EV+C+IC
Sbjct: 123 GHCSMWCCQQNKSEY---RACTRCGEIGHSTSTHGLGCSSCDEYHDDGECRLSEVKCFIC 179
Query: 283 RCFGHL---CCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSS-- 337
H C +N A+ +S + G+T C A+S G+ + A+ SS
Sbjct: 180 ESQDHYLAQCPLNFQGALQLALS-----KQGNTSSAPAKCS---AKSEGKVLTANKSSPI 231
Query: 338 CYNCGAEGHFARECVSSSKVRKRNIDAST 366
C+ C EGHFA +C +S R + S+
Sbjct: 232 CFTC-REGHFAFQCPQNSPDRSEEFEESS 259
>gi|358365333|dbj|GAA81955.1| zinc knuckle transcription factor [Aspergillus kawachii IFO 4308]
Length = 489
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 55/137 (40%), Gaps = 17/137 (12%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ-----DCFICKKGGHRAKD 237
C NC +GH A +C + C CGS +H +C + +C C + GH AKD
Sbjct: 300 CVNCSADGHRARDCPEPRRNVFACRNCGSEDHKASECPNPRSAENVECKRCNEMGHFAKD 359
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISD 295
CP K + C CG H C D+ V C C GH C D
Sbjct: 360 CPQKPP-----PRTCRNCGSEDHVAKECDKPR---DVSTVTCRNCDEVGHFSRDCPKKRD 411
Query: 296 AVPGEVSCFRCGQLGHT 312
V C CG++GHT
Sbjct: 412 Y--SRVKCNNCGEMGHT 426
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 11/94 (11%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ----DCFICKKGGHRAKDC 238
C NCG +GH A NC ++ CF CG H +C+K + C IC K GH A +C
Sbjct: 59 CRNCGSDGHFARNCPEP-RKDIACFNCGEDGHNKSECTKPRIFKGACRICNKEGHPAAEC 117
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
P+K VC C GH C+ + D
Sbjct: 118 PEKA------PDVCKNCKMEGHKTMDCKENRRFD 145
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 71/188 (37%), Gaps = 55/188 (29%)
Query: 206 CFVCGSLEHGVRQCSKAQD--------CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGD 257
C CG+L H R C + ++ C C GHRA+DCP+ ++ F C CG
Sbjct: 273 CNNCGALGHTFRGCKEEREERERVGVKCVNCSADGHRARDCPEPRRNVF----ACRNCGS 328
Query: 258 SGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWN 317
H C N S ++ V C RC ++GH
Sbjct: 329 EDHKASECPNPRSAEN---------------------------VECKRCNEMGHFA---K 358
Query: 318 SCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS---SKVRKRNIDASTPTFRPHRE 374
C Q + P +C NCG+E H A+EC S V RN D R +
Sbjct: 359 DCPQ----------KPPPRTCRNCGSEDHVAKECDKPRDVSTVTCRNCDEVGHFSRDCPK 408
Query: 375 NKDHSGIK 382
+D+S +K
Sbjct: 409 KRDYSRVK 416
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 52/126 (41%), Gaps = 31/126 (24%)
Query: 176 PDRGWQTCYNCGEEGHMAVNC---RSA-----------------VKRKKP---CFVCGSL 212
P R C NCG E H A C RSA +K P C CGS
Sbjct: 316 PRRNVFACRNCGSEDHKASECPNPRSAENVECKRCNEMGHFAKDCPQKPPPRTCRNCGSE 375
Query: 213 EHGVRQCSKAQD-----CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
+H ++C K +D C C + GH ++DCP K + C CG+ GH + C
Sbjct: 376 DHVAKECDKPRDVSTVTCRNCDEVGHFSRDCPKKRD---YSRVKCNNCGEMGHTIKRCPT 432
Query: 268 SYSLDD 273
+ + +D
Sbjct: 433 ANATED 438
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCS-KAQD-CFICKKGGHRAKDC 238
C+NCGE+GH C K C +C H +C KA D C CK GH+ DC
Sbjct: 80 ACFNCGEDGHNKSECTKPRIFKGACRICNKEGHPAAECPEKAPDVCKNCKMEGHKTMDC 138
>gi|300176386|emb|CBK23697.2| unnamed protein product [Blastocystis hominis]
Length = 221
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 58/133 (43%), Gaps = 31/133 (23%)
Query: 183 CYNCGEEGHMAVNCRS----AVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDC 238
C C + GH+A NC A +R+ G+ R+ C+ C + GH A+DC
Sbjct: 108 CRACHKPGHIARNCPERPPRAERRE------GARPRRFRRFVPYNTCYRCLQPGHLARDC 161
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVP 298
QN VC +C GH C+N E CY C+ GH IS A P
Sbjct: 162 --------QNEIVCSRCEQPGHKARECKN--------EPVCYRCKQSGH-----ISSACP 200
Query: 299 GEVSCFRCGQLGH 311
+ C++CGQ GH
Sbjct: 201 NPIVCYKCGQPGH 213
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 12/86 (13%)
Query: 180 WQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCP 239
+ TCY C + GH+A +C++ + C C H R+C C+ CK+ GH + CP
Sbjct: 145 YNTCYRCLQPGHLARDCQNEIV----CSRCEQPGHKARECKNEPVCYRCKQSGHISSACP 200
Query: 240 DKHKSGFQNAQVCLKCGDSGHDMFSC 265
N VC KCG GH C
Sbjct: 201 --------NPIVCYKCGQPGHKRSEC 218
>gi|110815940|sp|Q77373.3|POL_HV1AN RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol;
Contains: RecName: Full=Matrix protein p17; Short=MA;
Contains: RecName: Full=Capsid protein p24; Short=CA;
Contains: RecName: Full=Spacer peptide p2; Contains:
RecName: Full=Nucleocapsid protein p7; Short=NC;
Contains: RecName: Full=Transframe peptide; Short=TF;
Contains: RecName: Full=p6-pol; Short=p6*; Contains:
RecName: Full=Protease; AltName: Full=PR; AltName:
Full=Retropepsin; Contains: RecName: Full=Reverse
transcriptase/ribonuclease H; AltName:
Full=Exoribonuclease H; AltName: Full=p66 RT; Contains:
RecName: Full=p51 RT; Contains: RecName: Full=p15;
Contains: RecName: Full=Integrase; Short=IN
Length = 1435
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCF--ICKKG 231
+P +G C+NCG+EGH+A NCR+ RKK C+ CG H ++ C + F I G
Sbjct: 387 NPIRKGTIKCFNCGKEGHIARNCRAP--RKKGCWKCGQEGHQMKDCRNGKQFFRQILASG 444
Query: 232 GHRAKDC 238
GH A+
Sbjct: 445 GHEARQL 451
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 22/43 (51%), Gaps = 6/43 (13%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
CF C K GH A++C K G C KCG GH M CRN
Sbjct: 396 CFNCGKEGHIARNCRAPRKKG------CWKCGQEGHQMKDCRN 432
>gi|425774261|gb|EKV12574.1| hypothetical protein PDIG_43280 [Penicillium digitatum PHI26]
gi|425778540|gb|EKV16664.1| hypothetical protein PDIP_34510 [Penicillium digitatum Pd1]
Length = 185
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 80/203 (39%), Gaps = 46/203 (22%)
Query: 173 FDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKP-CFVCGSLEHGVRQC---SKAQDCFIC 228
F P RG C+NCGE H A +C K+ P C+ C H R+C +K + C+ C
Sbjct: 3 FPPAGRGG--CFNCGEASHQAKDC---PKKGNPTCYNCNGQGHLSRECQEPAKEKSCYRC 57
Query: 229 KKGGHRAKDCPD--KHKSGFQNAQVCLKCGDSGHDMFSCRN------------------S 268
+ GH +++CP +Q C KCG GH +C
Sbjct: 58 GQTGHLSRECPQGGDGNYSGGGSQECYKCGQVGHIARNCSQGGNYGGGYSTGGYGGGFGG 117
Query: 269 YSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRG 328
++ CY C FGH+ D G+ C+ CG++GH + ++G
Sbjct: 118 PGGAGGRQQTCYSCGGFGHM----ARDCTQGQ-KCYNCGEVGHVSRDCPT------EAKG 166
Query: 329 ETVEASPSSCYNCGAEGHFAREC 351
E + CY C GH C
Sbjct: 167 ERM------CYKCKQPGHVQSAC 183
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 26/109 (23%)
Query: 181 QTCYNCGEEGHMAVNC----------------------RSAVKRKKPCFVCGSLEHGVRQ 218
Q CY CG+ GH+A NC A R++ C+ CG H R
Sbjct: 81 QECYKCGQVGHIARNCSQGGNYGGGYSTGGYGGGFGGPGGAGGRQQTCYSCGGFGHMARD 140
Query: 219 CSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
C++ Q C+ C + GH ++DCP + K ++C KC GH +C N
Sbjct: 141 CTQGQKCYNCGEVGHVSRDCPTEAKG----ERMCYKCKQPGHVQSACPN 185
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 57/156 (36%), Gaps = 42/156 (26%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
CF C + H+AKDCP K C C GH C+ + KE CY C
Sbjct: 11 CFNCGEASHQAKDCPKKGNP------TCYNCNGQGHLSRECQ-----EPAKEKSCYRCGQ 59
Query: 285 FGHLCCVNISDAVP----------GEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEAS 334
GHL S P G C++CGQ+GH +C Q G +
Sbjct: 60 TGHL-----SRECPQGGDGNYSGGGSQECYKCGQVGHIA---RNCSQGGNYGGGYSTGGY 111
Query: 335 PS-------------SCYNCGAEGHFARECVSSSKV 357
+CY+CG GH AR+C K
Sbjct: 112 GGGFGGPGGAGGRQQTCYSCGGFGHMARDCTQGQKC 147
>gi|299929703|gb|ADJ58059.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSNVQHANVMMQRGNFKGPRSIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|224120076|ref|XP_002318236.1| predicted protein [Populus trichocarpa]
gi|222858909|gb|EEE96456.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 10/115 (8%)
Query: 206 CFVCGSLEHGVRQCSKAQD------CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSG 259
CF+C + +H + C + + C +C+ GH K CP+K+ + + C CG+ G
Sbjct: 73 CFICKAKDHIAKLCPQKSEWERNKICLLCRHRGHSLKRCPNKNDETM-DQKSCYNCGEKG 131
Query: 260 HDMFSCRNSYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
H + C K C+IC GHL C N P C CG + H
Sbjct: 132 HSLSQCPQPREDGGTKFANCFICNERGHLSKDCPKNTRGIYPKGGCCKVCGGVTH 186
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 35/132 (26%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
CFICK H AK CP KS ++ ++CL C GH + C N
Sbjct: 73 CFICKAKDHIAKLCP--QKSEWERNKICLLCRHRGHSLKRCPNK---------------- 114
Query: 285 FGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAE 344
+D + SC+ CG+ GH+ + C Q R G T A+ C+ C
Sbjct: 115 ---------NDETMDQKSCYNCGEKGHS---LSQCPQP--REDGGTKFAN---CFICNER 157
Query: 345 GHFARECVSSSK 356
GH +++C +++
Sbjct: 158 GHLSKDCPKNTR 169
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 39/96 (40%), Gaps = 11/96 (11%)
Query: 181 QTCYNCGEEGHMAVNCRSA---VKRKKPCFVCGSLEHGVRQC--------SKAQDCFICK 229
+ C C GH C + +K C+ CG H + QC +K +CFIC
Sbjct: 96 KICLLCRHRGHSLKRCPNKNDETMDQKSCYNCGEKGHSLSQCPQPREDGGTKFANCFICN 155
Query: 230 KGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
+ GH +KDCP + + C CG H C
Sbjct: 156 ERGHLSKDCPKNTRGIYPKGGCCKVCGGVTHLARDC 191
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 9/116 (7%)
Query: 182 TCYNCGEEGHMAVNC--RSAVKRKKPCFVCGSLEHGVRQCSKAQD-------CFICKKGG 232
+C+ C + H+A C +S +R K C +C H +++C D C+ C + G
Sbjct: 72 SCFICKAKDHIAKLCPQKSEWERNKICLLCRHRGHSLKRCPNKNDETMDQKSCYNCGEKG 131
Query: 233 HRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
H CP + G C C + GH C + K C +C HL
Sbjct: 132 HSLSQCPQPREDGGTKFANCFICNERGHLSKDCPKNTRGIYPKGGCCKVCGGVTHL 187
>gi|22596338|gb|AAN03118.1|AF457064_1 gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 363 EAMSQVQQTNVMMQRGNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 412
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 413 GKEGHQMKDCTERQANFLGK 432
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C G GH A A+ + + V ++ G + K CF C K GH A++C
Sbjct: 348 CQGVGGPGHKARVLAEAMSQVQQTNVM--MQRGNFRGPKRIKCFNCGKEGHLARNCRAPR 405
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 406 KKG------CWKCGKEGHQMKDC 422
>gi|340057210|emb|CCC51552.1| putative universal minicircle sequence binding protein (UMSBP)
[Trypanosoma vivax Y486]
Length = 138
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 61/141 (43%), Gaps = 25/141 (17%)
Query: 178 RGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKD 237
RG ++CYNCG+ GH++ C A + + C+ C + GH ++D
Sbjct: 8 RGDRSCYNCGQPGHISRECPGARSGN----------------ADGRACYNCGQPGHISRD 51
Query: 238 CPDKHKSGFQNAQVCLKCGDSGH---DMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVN 292
CP + C CG GH D + R +Y + CY C+ GH+ C N
Sbjct: 52 CPGMRGGSSFGGRSCYNCGKVGHISRDCPTARGAYGGPQTRS--CYHCQQEGHIARDCPN 109
Query: 293 IS--DAVPGEVSCFRCGQLGH 311
AV G +C+ CGQ GH
Sbjct: 110 APADGAVRGGGACYNCGQPGH 130
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 54/133 (40%), Gaps = 12/133 (9%)
Query: 223 QDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYIC 282
+ C+ C + GH +++CP +SG + + C CG GH C CY C
Sbjct: 11 RSCYNCGQPGHISRECPGA-RSGNADGRACYNCGQPGHISRDCPGMRGGSSFGGRSCYNC 69
Query: 283 RCFGHLC--CVNISDAV--PGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSC 338
GH+ C A P SC+ C Q GH + C + + +C
Sbjct: 70 GKVGHISRDCPTARGAYGGPQTRSCYHCQQEGHI-------ARDCPNAPADGAVRGGGAC 122
Query: 339 YNCGAEGHFAREC 351
YNCG GH +R C
Sbjct: 123 YNCGQPGHISRAC 135
>gi|326475301|gb|EGD99310.1| Zinc knuckle transcription factor (CnjB) [Trichophyton tonsurans
CBS 112818]
Length = 494
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 40/95 (42%), Gaps = 10/95 (10%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ----DCFICKKGGHRAKD 237
TC NCG+ GH A C K CF CG H C + C +C+K GH A +
Sbjct: 52 TCRNCGQAGHFARECPEPRKPSGACFNCGQEGHNKSDCPNPRVFTGTCRVCEKEGHPAAE 111
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
CPD+ +C C GH C + L+
Sbjct: 112 CPDRP------PDICKNCKGEGHKTMECTENRKLE 140
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 69/167 (41%), Gaps = 34/167 (20%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCR---SAVKR-KKPCFVCGSLEHGVRQCSKAQ----DCF 226
P DR C NCG+ GH+ +C+ S V+R + C C H R C +A+ C
Sbjct: 281 PFDRQIPKCSNCGKMGHIMKSCKEELSVVERVEVKCVNCKQPGHRARDCKEARVDRFACR 340
Query: 227 ICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGH---------DMFSCRNSYSLD----- 272
C KGGHR+ D+ + C +C + GH +CRN S D
Sbjct: 341 NCGKGGHRSN---DRTEPRSAEGVECKRCNEVGHFAKDCPQGGGSRACRNCGSEDHIARD 397
Query: 273 -----DLKEVQCYICRCFGHLC--CVNISDAVPGEVSCFRCGQLGHT 312
++ V C C GH C D +V C CG++GHT
Sbjct: 398 CDQPRNMANVTCRNCEEMGHFSRDCTKKKDW--SKVKCSCCGEMGHT 442
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 252 CLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGH 311
C CG GH M SC+ S+ + EV+C C+ GH + +A +C CG+ GH
Sbjct: 289 CSNCGKMGHIMKSCKEELSVVERVEVKCVNCKQPGHR-ARDCKEARVDRFACRNCGKGGH 347
Query: 312 -----------TGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
G+ C + ++ +C NCG+E H AR+C
Sbjct: 348 RSNDRTEPRSAEGVECKRCNEVGHFAKDCPQGGGSRACRNCGSEDHIARDC 398
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 47/143 (32%), Gaps = 46/143 (32%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
C C + GH A++CP+ K + C CG GH+ C N R
Sbjct: 53 CRNCGQAGHFARECPEPRKP----SGACFNCGQEGHNKSDCPNP--------------RV 94
Query: 285 FGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAE 344
F C V C + GH E + P C NC E
Sbjct: 95 FTGTCRV--------------CEKEGHPA--------------AECPDRPPDICKNCKGE 126
Query: 345 GHFARECVSSSKVRKRNIDASTP 367
GH EC + K+ + N+ P
Sbjct: 127 GHKTMECTENRKLEQHNVPDKLP 149
>gi|169848221|ref|XP_001830818.1| zinc knuckle family protein [Coprinopsis cinerea okayama7#130]
gi|116507987|gb|EAU90882.1| zinc knuckle family protein [Coprinopsis cinerea okayama7#130]
Length = 340
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 49/113 (43%), Gaps = 29/113 (25%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-----------RKKP--------CFVCGSLEHGVRQCSKA 222
TC+ C E+GH A +C A + KKP C+ CGS +H + +C K
Sbjct: 145 TCFVCREKGHAARDCPRASELAAAAGEPPAEGKKPAASSVVGICYRCGSTKHNLSKCKKP 204
Query: 223 QD---------CFICKKGGHRAKDCP-DKHKSGFQNAQVCLKCGDSGHDMFSC 265
+ CF+C GH A CP +K K + N C CGD+ H C
Sbjct: 205 PNPENPLPYASCFVCSGKGHLASACPQNKTKGVYPNGGCCKICGDTSHLAKDC 257
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 20/107 (18%)
Query: 225 CFICKKGGHRAKDCP---------------DKHKSGFQNAQVCLKCGDSGHDMFSCRNSY 269
CF+C++ GH A+DCP K + +C +CG + H++ C+
Sbjct: 146 CFVCREKGHAARDCPRASELAAAAGEPPAEGKKPAASSVVGICYRCGSTKHNLSKCKKPP 205
Query: 270 SLDD-LKEVQCYICRCFGHL---CCVNISDAV-PGEVSCFRCGQLGH 311
+ ++ L C++C GHL C N + V P C CG H
Sbjct: 206 NPENPLPYASCFVCSGKGHLASACPQNKTKGVYPNGGCCKICGDTSH 252
>gi|331029860|gb|AEC50058.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 11/81 (13%)
Query: 150 EGVTTVEISDNIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFV 208
E ++ + NI+++K + +GP+ C+NCG+EGH+A NCR+ RKK C+
Sbjct: 365 EAMSQAQQHTNIMMQKGIFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWK 414
Query: 209 CGSLEHGVRQCSKAQDCFICK 229
CG H ++ C++ Q F+ K
Sbjct: 415 CGKEGHQMKDCTERQANFLGK 435
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 212 LEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
++ G+ + K CF C K GH A++C K G C KCG GH M C
Sbjct: 378 MQKGIFKGPKRIKCFNCGKEGHLARNCRAPRKKG------CWKCGKEGHQMKDC 425
>gi|299930159|gb|ADJ58287.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSNVQHANVMMQRGNFKGPRSIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|46137541|ref|XP_390462.1| hypothetical protein FG10286.1 [Gibberella zeae PH-1]
Length = 185
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 68/162 (41%), Gaps = 34/162 (20%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC------SKAQDCFI 227
D P +G CYNCG EGHM+ +C +K K C+ CG H R C +A +C+
Sbjct: 28 DCPTKGPAKCYNCGGEGHMSRDCTEPMKDNKSCYKCGQPGHISRDCPMSGGSGQATECYK 87
Query: 228 CKKG-----GHRAKDCPDKHKSGFQN------------AQVCLKCGDSGHDMFSCRNSYS 270
GH A++C +KS + N + C CG GH C N
Sbjct: 88 ASSNCRLLIGHIARNC---NKSSYGNNYGGGFQQQGGAGKTCYSCGGFGHMSRECVNG-- 142
Query: 271 LDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHT 312
++CY C GH ++ GE C++C Q GH
Sbjct: 143 ------MKCYNCGESGHYSRDCPKESAGGEKICYKCQQPGHV 178
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 76/190 (40%), Gaps = 42/190 (22%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA----QDCFICKKGGHRAKD 237
CY+CG H A +C K C+ CG H R C++ + C+ C + GH ++D
Sbjct: 15 ACYSCGSTAHQARDC--PTKGPAKCYNCGGEGHMSRDCTEPMKDNKSCYKCGQPGHISRD 72
Query: 238 CPDKHKSGFQNAQVCLKCGDS-----GHDMFSCRNSYSLDDLKEVQ---------CYICR 283
CP SG A C K + GH +C S ++ CY C
Sbjct: 73 CPMSGGSG--QATECYKASSNCRLLIGHIARNCNKSSYGNNYGGGFQQQGGAGKTCYSCG 130
Query: 284 CFGHLC--CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNC 341
FGH+ CVN + C+ CG+ GH + C + + GE + CY C
Sbjct: 131 GFGHMSRECVN-------GMKCYNCGESGH---YSRDCPK--ESAGGEKI------CYKC 172
Query: 342 GAEGHFAREC 351
GH +C
Sbjct: 173 QQPGHVQSQC 182
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 9/64 (14%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD-----CFICKKGGHRA 235
+TCY+CG GHM+ C + +K C+ CG H R C K C+ C++ GH
Sbjct: 124 KTCYSCGGFGHMSRECVNGMK----CYNCGESGHYSRDCPKESAGGEKICYKCQQPGHVQ 179
Query: 236 KDCP 239
CP
Sbjct: 180 SQCP 183
>gi|299930377|gb|ADJ58396.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ + ++ R L+GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQHPNIMMQRGNLKGPRRII-------KCFNCGKEGHLARNCRAP--RKKGCWKC 415
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 416 GKEGHQMKDCTERQANFLGK 435
>gi|117581809|gb|ABK41339.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSNVQHTNVMMQRGNFKGPRRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|413942254|gb|AFW74903.1| hypothetical protein ZEAMMB73_929566 [Zea mays]
Length = 647
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 66/155 (42%), Gaps = 29/155 (18%)
Query: 220 SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQC 279
SK + C+ C GH + CP+K S A+ C +CG GH +C N D + +C
Sbjct: 370 SKTRTCYECGTPGHFSSSCPNKKDS---EARKCYECGTPGHLSSACPNK---KDSEVRKC 423
Query: 280 YICRCFGHL--CCVNISDAVPGE-------------VSCFRCGQLGHTGLHWNSCM--QA 322
Y C GHL C N D+ E +C+ CG GH + + +
Sbjct: 424 YECGTAGHLSSACPNKKDSDEKEDNSNSTIAASKKRRTCYECGIPGHLSSNCPNKKDPEF 483
Query: 323 CARSRGETVEASPSS------CYNCGAEGHFAREC 351
+ + V+++P+S CY CG GH + C
Sbjct: 484 ISDEKNTNVDSAPASSKKRRTCYECGTPGHLSSAC 518
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 80/235 (34%), Gaps = 90/235 (38%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
+TCY CG GH + +C + ++ S+A+ C+ C GH + CP+
Sbjct: 373 RTCYECGTPGHFSSSCPN------------------KKDSEARKCYECGTPGHLSSACPN 414
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDD------------LKEVQCYICRCFGHL 288
K S + C +CG +GH +C N D+ K CY C GHL
Sbjct: 415 KKDSEVRK---CYECGTAGHLSSACPNKKDSDEKEDNSNSTIAASKKRRTCYECGIPGHL 471
Query: 289 C--CVN------ISDAVPGEV-----------SCFRCGQLGHTGLHWNSCMQACARSRG- 328
C N ISD V +C+ CG GH AC R
Sbjct: 472 SSNCPNKKDPEFISDEKNTNVDSAPASSKKRRTCYECGTPGHLS-------SACPNKRTS 524
Query: 329 -------ETVEASPSS-----------------------CYNCGAEGHFARECVS 353
E +A P++ CY CG GH + C S
Sbjct: 525 ESVLNNREPADAKPATTIKPEETKAGDESNSVASKKRRKCYECGISGHLSSACPS 579
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 75/188 (39%), Gaps = 25/188 (13%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVC----GSLEHGVRQCSKAQDCFICKKGGHRAK 236
+TCY CG GH++ NC + +K P F+ +++ K + C+ C GH +
Sbjct: 460 RTCYECGIPGHLSSNCPN---KKDPEFISDEKNTNVDSAPASSKKRRTCYECGTPGHLSS 516
Query: 237 DCPDKHKS-----GFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCV 291
CP+K S + A + + S S+ K +CY C GHL
Sbjct: 517 ACPNKRTSESVLNNREPADAKPATTIKPEETKAGDESNSVASKKRRKCYECGISGHL--- 573
Query: 292 NISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPS--------SCYNCGA 343
S A P + + G H N+ + + + + +A + +CY CG
Sbjct: 574 --SSACPSKKAAEPVCNEEKPGNHSNAVLPVVSDEKKASEDAKSAPAKKKKRRTCYECGI 631
Query: 344 EGHFAREC 351
GH + EC
Sbjct: 632 AGHLSSEC 639
>gi|125532839|gb|EAY79404.1| hypothetical protein OsI_34532 [Oryza sativa Indica Group]
Length = 255
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 77/217 (35%), Gaps = 52/217 (23%)
Query: 159 DNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
D R RGP F P D C NC GH A +C + C CG H +
Sbjct: 22 DAPYRRDSRRGPSRF-PND----LCNNCKRPGHFARDCPNVAL----CHACGLPGHIAAE 72
Query: 219 CSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQ 278
CS C+ CK+ GH A CP N +C CG SGH C
Sbjct: 73 CSSKDLCWNCKEPGHMANSCP--------NEGICRNCGKSGHIAREC------------- 111
Query: 279 CYICRCFGHLCCVNISDAVPGEVS-CFRCGQLGHTGLHWNSCMQAC--ARSRGETVEASP 335
+ +PGE+ C C + GH + +AC R G P
Sbjct: 112 -------------SAPPMLPGEMRLCSNCYKPGHLAAECTN-EKACNNCRKSGHLARNCP 157
Query: 336 SS--CYNCGAEGHFARECVSSSKVRKRNIDASTPTFR 370
+ C C GH AREC S + +R P FR
Sbjct: 158 NEPVCNLCNVSGHLARECPKSDAINER---GGPPPFR 191
>gi|119610730|gb|EAW90324.1| NACHT, leucine rich repeat and PYD (pyrin domain) containing 1,
isoform CRA_d [Homo sapiens]
Length = 1612
Score = 53.5 bits (127), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 14/109 (12%)
Query: 183 CYNCGEEGHMAVNCRSAVKRK----KPCFVCGSLEHGVRQCSKAQD----------CFIC 228
C++C + G +C +A++ + + C+ CGS +H + +C D CF+C
Sbjct: 1471 CFHCRKPGRGIADCPAALENQDMGTRRCYKCGSTDHEITKCKAKVDPPLGECPFAECFVC 1530
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
+ GH ++ CPD K + + C G H C S + D + V
Sbjct: 1531 GEMGHLSRSCPDNPKGLYADGSGCQLHGSVEHLKKDCPESENSDRMATV 1579
Score = 45.8 bits (107), Expect = 0.052, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYS--LD 272
RQ +K A CF C+K G DCP ++ + C KCG + H++ C+ L
Sbjct: 1461 RQGAKKNAMVCFHCRKPGRGIADCPAALENQDMGTRRCYKCGSTDHEITKCKAKVDPPLG 1520
Query: 273 DLKEVQCYICRCFGHL 288
+ +C++C GHL
Sbjct: 1521 ECPFAECFVCGEMGHL 1536
Score = 40.4 bits (93), Expect = 2.2, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 13/119 (10%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVP 298
K + +NA VC C G + C + D+ +CY C H C D
Sbjct: 1460 KRQGAKKNAMVCFHCRKPGRGIADCPAALENQDMGTRRCYKCGSTDHEITKCKAKVDPPL 1519
Query: 299 GE---VSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
GE CF CG++GH SC + + A S C G+ H ++C S
Sbjct: 1520 GECPFAECFVCGEMGHLS---RSC-----PDNPKGLYADGSGCQLHGSVEHLKKDCPES 1570
>gi|332079144|gb|AEE00152.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 448
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 10/81 (12%)
Query: 150 EGVTTVEISDNIVL-RKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFV 208
E ++ V + NI++ R RGPR C+NCG+EGH+A NCR+ RKK C+
Sbjct: 365 EAMSQVTNAANIMMQRGNFRGPRKII-------KCFNCGKEGHLARNCRAP--RKKGCWK 415
Query: 209 CGSLEHGVRQCSKAQDCFICK 229
CG H ++ C++ Q F+ K
Sbjct: 416 CGKEGHQMKDCTERQANFLGK 436
>gi|327294357|ref|XP_003231874.1| zinc knuckle transcription factor [Trichophyton rubrum CBS 118892]
gi|326465819|gb|EGD91272.1| zinc knuckle transcription factor [Trichophyton rubrum CBS 118892]
Length = 471
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 40/95 (42%), Gaps = 10/95 (10%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ----DCFICKKGGHRAKD 237
TC NCG+ GH A C K CF CG H C + C IC+K GH A +
Sbjct: 52 TCRNCGQAGHFARECPEPRKPSGACFNCGQEGHNKSDCPNPRVFTGTCRICEKEGHPAAE 111
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
CPD+ +C C GH C + L+
Sbjct: 112 CPDRP------PDICKNCKGEGHKTMECTENRKLE 140
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 68/181 (37%), Gaps = 41/181 (22%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCR---SAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKG 231
P DR C NCG+ GH+ +C+ S V+R + C CK+
Sbjct: 260 PLDRQIPKCSNCGKMGHIMKSCKEELSVVERVE------------------VKCVNCKQP 301
Query: 232 GHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCV 291
GHRA+DC + F C CG GH C S + V+C C GH
Sbjct: 302 GHRARDCKEARVDRF----ACRNCGYGGHRSNECTEPRSAEG---VECKRCNEVGHF--A 352
Query: 292 NISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
N G +C CG H AR + + +C NC GHF+R+C
Sbjct: 353 NDCPQGGGSRACRNCGSEDHI-----------ARDCDQPRNMATVTCRNCEEMGHFSRDC 401
Query: 352 V 352
Sbjct: 402 T 402
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 60/150 (40%), Gaps = 21/150 (14%)
Query: 252 CLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGH 311
C CG GH M SC+ S+ + EV+C C+ GH D V F C G+
Sbjct: 268 CSNCGKMGHIMKSCKEELSVVERVEVKCVNCKQPGH----RARDCKEARVDRFACRNCGY 323
Query: 312 TGLHWNSCMQA-------CARSR--GETVEASPS-----SCYNCGAEGHFAREC---VSS 354
G N C + C R G P +C NCG+E H AR+C +
Sbjct: 324 GGHRSNECTEPRSAEGVECKRCNEVGHFANDCPQGGGSRACRNCGSEDHIARDCDQPRNM 383
Query: 355 SKVRKRNIDASTPTFRPHRENKDHSGIKSA 384
+ V RN + R + KD S +K +
Sbjct: 384 ATVTCRNCEEMGHFSRDCTKKKDWSKVKCS 413
>gi|158295392|ref|XP_316189.4| AGAP006128-PA [Anopheles gambiae str. PEST]
gi|157016015|gb|EAA11249.5| AGAP006128-PA [Anopheles gambiae str. PEST]
Length = 1762
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 91/222 (40%), Gaps = 32/222 (14%)
Query: 166 LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDC 225
LL RY DPP R C NCGE GH+ CR+A K C++CG H +C K
Sbjct: 856 LLLKDRYPDPP-RKEIICSNCGERGHVRFKCRNAPKLVT-CYMCGEQGHREPRCPKT--- 910
Query: 226 FICKKGGHRAKDCPDKHKSGFQNA-QVCLKCGDSGHDMFSC----RNSYSL--DDLKEVQ 278
+C G + ++ K+ ++A +C CG GH SC R +S D++ +
Sbjct: 911 -VCLNCGAKTRNFVRGCKTCARDADTICFSCGVRGHTQRSCPDLWRRYHSTIEDNVPLKE 969
Query: 279 CYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSC 338
++ CCV C R G H C A R G + + S
Sbjct: 970 DFVKNPKARWCCV-----------CCRHGHQAH------KCNDA-RRIFGHPIPNTSVSS 1011
Query: 339 YNCGAEGHFARECVSSSKVRKRNIDASTPTFRPHRENKDHSG 380
Y G + R ++ ++R + A PT R + + D +G
Sbjct: 1012 YLPAYRGEYNRSSKRQTEEQQRRL-ALDPTARYNLLSSDANG 1052
>gi|396482148|ref|XP_003841407.1| similar to zinc knuckle domain containing protein [Leptosphaeria
maculans JN3]
gi|312217981|emb|CBX97928.1| similar to zinc knuckle domain containing protein [Leptosphaeria
maculans JN3]
Length = 220
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 73/199 (36%), Gaps = 41/199 (20%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
+ C+ CG GH A C S+ ++ C+ C H C ++ + C+ C+ GH
Sbjct: 7 RACFKCGNVGHYAEVCSSS---ERLCYNCKQPGHESNGCPHPRTTETKQCYHCQGLGHVQ 63
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN----------------------SYSLDD 273
DCP SG + C CG SGH +C N
Sbjct: 64 ADCPTLRLSGAGTSGRCYSCGLSGHLARNCPNPGMGGRGVGAPPRGGGFGGGFRGGFAGG 123
Query: 274 LKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEA 333
+ CY C H D + C+ CG+LGH + C G +
Sbjct: 124 ARPATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI-------SRDCTAPNGGPLNT 172
Query: 334 SPSSCYNCGAEGHFARECV 352
+ +CY CG GH +R+C
Sbjct: 173 AGKTCYRCGETGHISRDCA 191
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 58/154 (37%), Gaps = 22/154 (14%)
Query: 203 KKPCFVCGSLEHGVRQCSKAQD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHD 261
++ CF CG++ H CS ++ C+ CK+ GH + CP + + C C GH
Sbjct: 6 RRACFKCGNVGHYAEVCSSSERLCYNCKQPGHESNGCPHPRTT---ETKQCYHCQGLGHV 62
Query: 262 MFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVPGEVSCFRCGQLGHTGLHWNSC 319
C +CY C GHL C N PG +G G+
Sbjct: 63 QADCPTLRLSGAGTSGRCYSCGLSGHLARNCPN-----PG---------MGGRGVGAPPR 108
Query: 320 MQACARSRGETVEAS--PSSCYNCGAEGHFAREC 351
P++CY CG HFAR+C
Sbjct: 109 GGGFGGGFRGGFAGGARPATCYKCGGPNHFARDC 142
>gi|429249232|gb|AFZ77660.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + + +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQQTNIMMQKGIFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
Score = 41.6 bits (96), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C G GH A A+ + + + ++ G+ + K CF C K GH A++C
Sbjct: 350 CQGVGGPGHKARVLAEAMSQVQQTNIM--MQKGIFKGPKRIKCFNCGKEGHLARNCRAPR 407
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 408 KKG------CWKCGKEGHQMKDC 424
>gi|317033248|ref|XP_001395135.2| zinc knuckle nucleic acid binding protein [Aspergillus niger CBS
513.88]
Length = 228
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 75/188 (39%), Gaps = 26/188 (13%)
Query: 183 CYNCGEEGHMAVNC-RSAVKRKKPCFVCGSLEHGVRQCSKAQ------DCFICKKGGHRA 235
CYNC + GH + +C R K C+ C L H C + C+ C + GH A
Sbjct: 28 CYNCKQPGHESSSCPRPRTTETKQCYNCQGLGHVQADCPTLRLNGANGRCYNCSQPGHLA 87
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISD 295
++CP SG A +SG R Y + CY C H D
Sbjct: 88 RNCPAP-ASGAPRAPAPRGGFNSGF-----RGGYGYP--RAATCYKCGGPNHF----ARD 135
Query: 296 AVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSS 355
+ C+ CG+LGH + C G + ++ CY C GH +R+C S+
Sbjct: 136 CQAQAMKCYACGKLGHI-------SRECTAPNGGPLSSAGKVCYKCSQAGHISRDCPSNE 188
Query: 356 KVRKRNID 363
V ++ +D
Sbjct: 189 AVAQQPVD 196
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 12/68 (17%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC---------SKAQDCFICKKGG 232
TCY CG H A +C++ + C+ CG L H R+C S + C+ C + G
Sbjct: 122 TCYKCGGPNHFARDCQAQAMK---CYACGKLGHISRECTAPNGGPLSSAGKVCYKCSQAG 178
Query: 233 HRAKDCPD 240
H ++DCP
Sbjct: 179 HISRDCPS 186
>gi|225713264|gb|ACO12478.1| Zinc finger CCHC domain-containing protein 9 [Lepeophtheirus
salmonis]
Length = 394
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 41/102 (40%), Gaps = 17/102 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP--------CFVCGSLEHGVRQCS---------KAQD 224
CY C + GH +C A KK CF CGS+EH + C +
Sbjct: 246 VCYLCRKPGHFLSDCPEAKDGKKATKVGAVGSCFKCGSMEHTSKDCESKLKGEAAYRFAV 305
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCR 266
CFIC + GH AK CP K + C CG H CR
Sbjct: 306 CFICSETGHLAKACPSNPKGLYPKGGGCRFCGSVEHLKSECR 347
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 43/101 (42%), Gaps = 10/101 (9%)
Query: 220 SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQV-----CLKCGDSGHDMFSCRNSYSLD-D 273
SK C++C+K GH DCP+ K G + +V C KCG H C + +
Sbjct: 242 SKKMVCYLCRKPGHFLSDCPE-AKDGKKATKVGAVGSCFKCGSMEHTSKDCESKLKGEAA 300
Query: 274 LKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+ C+IC GHL C N P C CG + H
Sbjct: 301 YRFAVCFICSETGHLAKACPSNPKGLYPKGGGCRFCGSVEH 341
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 14/89 (15%)
Query: 275 KEVQCYICRCFGHLC--CVNISDA-----VPGEVSCFRCGQLGHTGLHWNSCMQACARSR 327
K++ CY+CR GH C D V SCF+CG + HT S ++ A R
Sbjct: 243 KKMVCYLCRKPGHFLSDCPEAKDGKKATKVGAVGSCFKCGSMEHTSKDCESKLKGEAAYR 302
Query: 328 GETVEASPSSCYNCGAEGHFARECVSSSK 356
+ C+ C GH A+ C S+ K
Sbjct: 303 F-------AVCFICSETGHLAKACPSNPK 324
>gi|189239868|ref|XP_001807187.1| PREDICTED: similar to zinc finger protein [Tribolium castaneum]
Length = 438
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 221 KAQDCFICKKGGHRAKDCPDKHKSGFQNA--QVCLKCGDSGHDMFSCRNSYSLDDLKEVQ 278
K + CF C+K GH +CP+ K +++ +C KCG + H F C+ + K Q
Sbjct: 298 KKKVCFNCRKSGHNLSECPELGKEIAESSGTGICFKCGSTEHTHFECKVVRG-QEFKFAQ 356
Query: 279 CYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
C+IC GH+ C N P +C CG + H
Sbjct: 357 CFICHEQGHIARQCPDNARGLYPKGGACKVCGDVTH 392
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 39/93 (41%), Gaps = 13/93 (13%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKP------CFVCGSLEHGVRQCS-------KAQDCFI 227
+ C+NC + GH C K CF CGS EH +C K CFI
Sbjct: 300 KVCFNCRKSGHNLSECPELGKEIAESSGTGICFKCGSTEHTHFECKVVRGQEFKFAQCFI 359
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
C + GH A+ CPD + + C CGD H
Sbjct: 360 CHEQGHIARQCPDNARGLYPKGGACKVCGDVTH 392
>gi|342186041|emb|CCC95526.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 492
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 58/131 (44%), Gaps = 24/131 (18%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C+ C ++GH C + C+ CG+ H ++C CF C GHR+ DC K
Sbjct: 80 CFQCHQKGHTMPTCP-----QTRCYNCGNFGHSSQRCLSRPLCFHCSAPGHRSTDCQLKT 134
Query: 243 KSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVS 302
+ +VC +C + GH+M C SL L C+ C GH ++ P E
Sbjct: 135 R-----GRVCYRCKEPGHEMADC----SLTAL----CFTCHQAGH-----VAARCP-EGL 175
Query: 303 CFRCGQLGHTG 313
C RC GHT
Sbjct: 176 CSRCNARGHTA 186
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 70/189 (37%), Gaps = 44/189 (23%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP--------CFVCGSLEHGVRQC---SKAQDCFICKKG 231
C CGE GH +C +A KR + C CGS H C +++ +CF C +
Sbjct: 27 CLVCGETGHSRDDCTNAKKRPRSGEEEEASVCRGCGSSRHSQSSCPVRARSMECFQCHQK 86
Query: 232 GHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCV 291
GH CP C CG+ GH C L C+ C GH
Sbjct: 87 GHTMPTCPQTR---------CYNCGNFGHSSQRC--------LSRPLCFHCSAPGHR-ST 128
Query: 292 NISDAVPGEVSCFRCGQLGH-------TGLHWNSCMQACARSRGETVEASPSS-CYNCGA 343
+ G V C+RC + GH T L + +C QA G P C C A
Sbjct: 129 DCQLKTRGRV-CYRCKEPGHEMADCSLTALCF-TCHQA-----GHVAARCPEGLCSRCNA 181
Query: 344 EGHFARECV 352
GH A C
Sbjct: 182 RGHTAAACT 190
>gi|315056357|ref|XP_003177553.1| hypothetical protein MGYG_01625 [Arthroderma gypseum CBS 118893]
gi|311339399|gb|EFQ98601.1| hypothetical protein MGYG_01625 [Arthroderma gypseum CBS 118893]
Length = 472
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 73/181 (40%), Gaps = 41/181 (22%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHR 234
P DR C NCG+ GH+ +C+ EH V + + + C CK+ GHR
Sbjct: 257 PLDRQIPKCSNCGQMGHIMKSCKE--------------EHSVVERVEVK-CVNCKQPGHR 301
Query: 235 AKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNIS 294
A+DC + F C CG GH C S + V+C C GH +
Sbjct: 302 ARDCKEARVDRF----ACRNCGKGGHRSNECTEPRSAEG---VECKRCNEVGHF-----A 349
Query: 295 DAVP---GEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
P G +C CG H ++ C + R + +C+NC GHF+R+C
Sbjct: 350 KDCPQGGGSRACRNCGSEDHM-------VKDCDQPRN----MATVTCHNCEEMGHFSRDC 398
Query: 352 V 352
Sbjct: 399 T 399
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 39/95 (41%), Gaps = 10/95 (10%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ----DCFICKKGGHRAKD 237
TC NCG+ GH A C K CF CG H C + C IC+K GH A
Sbjct: 49 TCRNCGQAGHFARECPEPRKLSGACFNCGQEGHNKSDCPNPRIFTGTCRICEKEGHPAAQ 108
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
CPD+ +C C GH C + L+
Sbjct: 109 CPDRP------PDICKNCKAEGHKTMECTENRKLE 137
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 60/137 (43%), Gaps = 17/137 (12%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ-----DCFICKKGGHRAKD 237
C NC + GH A +C+ A + C CG H +C++ + +C C + GH AKD
Sbjct: 292 CVNCKQPGHRARDCKEARVDRFACRNCGKGGHRSNECTEPRSAEGVECKRCNEVGHFAKD 351
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISD 295
CP S + C CG H + C ++ V C+ C GH C D
Sbjct: 352 CPQGGGS-----RACRNCGSEDHMVKDCDQPR---NMATVTCHNCEEMGHFSRDCTKKKD 403
Query: 296 AVPGEVSCFRCGQLGHT 312
+V C CG++GHT
Sbjct: 404 W--SKVKCSCCGEMGHT 418
>gi|390347808|ref|XP_789049.2| PREDICTED: uncharacterized protein LOC584076 [Strongylocentrotus
purpuratus]
Length = 278
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 51/126 (40%), Gaps = 10/126 (7%)
Query: 217 RQCSKAQD--CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ KA + CF C++ GH DCP Q +C +CG + HD+ C L
Sbjct: 87 RQKKKADNMMCFHCRQPGHGVADCPQMLGDVEQGTGICYRCGSTEHDVSKCNAKVDKKLG 146
Query: 273 DLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGE 329
D +C+IC GHL C N P C CG + H W +C + +
Sbjct: 147 DFPYAKCFICGQTGHLSRMCPDNPRGLYPSGGGCKECGSMEH---KWWNCPRLFVSRKSP 203
Query: 330 TVEASP 335
+ P
Sbjct: 204 VLHPPP 209
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 14/103 (13%)
Query: 181 QTCYNCGEEGHMAVNCRSAV----KRKKPCFVCGSLEHGVRQCSKAQD----------CF 226
C++C + GH +C + + C+ CGS EH V +C+ D CF
Sbjct: 95 MMCFHCRQPGHGVADCPQMLGDVEQGTGICYRCGSTEHDVSKCNAKVDKKLGDFPYAKCF 154
Query: 227 ICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY 269
IC + GH ++ CPD + + + C +CG H ++C +
Sbjct: 155 ICGQTGHLSRMCPDNPRGLYPSGGGCKECGSMEHKWWNCPRLF 197
>gi|10039329|dbj|BAB13307.1| vasa-related protein CnVAS1 [Hydra vulgaris]
Length = 797
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 61/171 (35%), Gaps = 58/171 (33%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
+ C+ CG+EGHM+ C + CF CK+ GH ++DCP
Sbjct: 69 RACHKCGKEGHMSRECPDGGGG-----------------GGGRACFKCKQEGHMSRDCP- 110
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGE 300
+ G + C KCG GH C D G
Sbjct: 111 --QGGSGGGRACHKCGKEGHMSREC----------------------------PDGGGGG 140
Query: 301 VSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
+CF+C Q GH + C + G +C+ CG EGH +REC
Sbjct: 141 RACFKCKQEGHMS-------KDCPQGSGG---GGSRTCHKCGKEGHMSREC 181
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 21/82 (25%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDC 238
G + C+ CG+EGHM+ C + CF CK+ GH +KDC
Sbjct: 116 GGRACHKCGKEGHMSRECPDG-------------------GGGGRACFKCKQEGHMSKDC 156
Query: 239 PDKHKSGFQNAQVCLKCGDSGH 260
P SG ++ C KCG GH
Sbjct: 157 P--QGSGGGGSRTCHKCGKEGH 176
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
C ICK+ GH AKDCPDK C +CG+SGH C
Sbjct: 260 CRICKQSGHFAKDCPDKKP----RDDTCRRCGESGHFAKDC 296
>gi|299929713|gb|ADJ58064.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSHVQQANVMMQRGNFKGPRRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|242089287|ref|XP_002440476.1| hypothetical protein SORBIDRAFT_09g001570 [Sorghum bicolor]
gi|241945761|gb|EES18906.1| hypothetical protein SORBIDRAFT_09g001570 [Sorghum bicolor]
Length = 669
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 97/266 (36%), Gaps = 68/266 (25%)
Query: 181 QTCYNCGEEGHMAVNCR----SAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKG 231
+TCY CG GH + +C S V++ C+ CG+ H C S+A+ C+ C
Sbjct: 391 RTCYECGTPGHFSSSCPNKKDSDVRK---CYECGTPGHLSSACPNKKDSEARKCYECGTP 447
Query: 232 GHRAKDCPDKHKSGF----------------QNAQVCLKCGDSGHDMFSCRN-------- 267
GH + CP+K S + + C +CG GH SC N
Sbjct: 448 GHLSSACPNKKDSDVISDEKDANANSAIAASKKRRTCYECGIPGHLSSSCPNKKDSEFIS 507
Query: 268 --------SYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGHTGLHW 316
S + K CY C GHL C SD+VP + T +
Sbjct: 508 DEKKTNVDSATAPSKKRRTCYECGTPGHLSSACPNKRSDSVPNNREPVDDAKPATTIMSE 567
Query: 317 NSCM-----QACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVRKRNIDASTPTFRP 371
+ + A ++ R + CY CG GH + C N A+ P +
Sbjct: 568 ETKVGDESNSAASKKRRK--------CYECGISGHLSSAC--------PNKKAAEPVYNE 611
Query: 372 HRENKDHSGIKSAPHDLGKVHKRKKT 397
+ + + + S D K ++ K+
Sbjct: 612 EKPDNQSNTVLSVVADEKKANEDTKS 637
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 68/162 (41%), Gaps = 39/162 (24%)
Query: 220 SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQC 279
SK + C+ C GH + CP+K S + + C +CG GH +C N D + +C
Sbjct: 388 SKNRTCYECGTPGHFSSSCPNKKDS---DVRKCYECGTPGHLSSACPNK---KDSEARKC 441
Query: 280 YICRCFGHL--CCVNI--SDAVPGEV---------------SCFRCGQLGHTGLHWNSC- 319
Y C GHL C N SD + E +C+ CG GH +SC
Sbjct: 442 YECGTPGHLSSACPNKKDSDVISDEKDANANSAIAASKKRRTCYECGIPGHLS---SSCP 498
Query: 320 ----MQACARSRGETVEA--SPS----SCYNCGAEGHFAREC 351
+ + + V++ +PS +CY CG GH + C
Sbjct: 499 NKKDSEFISDEKKTNVDSATAPSKKRRTCYECGTPGHLSSAC 540
>gi|118426834|gb|ABK91168.1| gag protein [Human immunodeficiency virus 1]
Length = 172
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + LRGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNLRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|429249192|gb|AFZ77640.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + + +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQHTNIMMQKGIFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C G GH A A+ + + + ++ G+ + K CF C K GH A++C
Sbjct: 350 CQGVGGPGHKAKVLAEAMSQVQHTNIM--MQKGIFKGPKRIKCFNCGKEGHLARNCRAPR 407
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 408 KKG------CWKCGKEGHQMKDC 424
>gi|429249182|gb|AFZ77635.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + + +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQHTNIMMQKGIFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 212 LEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
++ G+ + K CF C K GH A++C K G C KCG GH M C
Sbjct: 377 MQKGIFKGPKRIKCFNCGKEGHLARNCRAPRKKG------CWKCGKEGHQMKDC 424
>gi|213521422|gb|ACJ50597.1| zinc finger protein [Lutzomyia shannoni]
Length = 150
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 58/138 (42%), Gaps = 41/138 (29%)
Query: 178 RGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD---CFICKKGGHR 234
R + CY C + GH A C+ R C+ C H R+CS++ D C+ C K GH
Sbjct: 38 RNREKCYKCNQTGHFARECKEEADR---CYRCNGTGHIARECSQSADDPSCYNCNKTGHL 94
Query: 235 AKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNIS 294
A+ CP++ +D+ + + CY C GH IS
Sbjct: 95 ARHCPEQ-----------------------------IDNRQSMSCYNCNKSGH-----IS 120
Query: 295 DAVP-GEVSCFRCGQLGH 311
P G SC+ CG+LGH
Sbjct: 121 RHCPEGGKSCYICGKLGH 138
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 67/176 (38%), Gaps = 43/176 (24%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
TCY C GH A C + V + + G + C+ C + GH A++C ++
Sbjct: 5 TCYKCNRPGHFARECTAGVGGPRD-----KMGGGSNYGRNREKCYKCNQTGHFARECKEE 59
Query: 242 HKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEV 301
A C +C +GH C S S DD CY C GHL + P ++
Sbjct: 60 -------ADRCYRCNGTGHIAREC--SQSADD---PSCYNCNKTGHL-----ARHCPEQI 102
Query: 302 ------SCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
SC+ C + GH H SCY CG GH +REC
Sbjct: 103 DNRQSMSCYNCNKSGHISRH---------------CPEGGKSCYICGKLGHISREC 143
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 59/145 (40%), Gaps = 35/145 (24%)
Query: 225 CFICKKGGHRAKDCP-------DKHKSGF---QNAQVCLKCGDSGHDMFSCRNSYSLDDL 274
C+ C + GH A++C DK G +N + C KC +GH C+
Sbjct: 6 CYKCNRPGHFARECTAGVGGPRDKMGGGSNYGRNREKCYKCNQTGHFARECKE------- 58
Query: 275 KEVQCYICRCFGHLC--CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVE 332
+ +CY C GH+ C +D + SC+ C + GH H E ++
Sbjct: 59 EADRCYRCNGTGHIARECSQSAD----DPSCYNCNKTGHLARHCP-----------EQID 103
Query: 333 ASPS-SCYNCGAEGHFARECVSSSK 356
S SCYNC GH +R C K
Sbjct: 104 NRQSMSCYNCNKSGHISRHCPEGGK 128
>gi|168060692|ref|XP_001782328.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666187|gb|EDQ52848.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 188
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 197 RSAVKRKKPCFVCGSLEHGVRQCSKAQD--------CFICKKGGHRAKDCPDKHKSGFQN 248
++ +K + CF+C S +H + C + C C+ GH K+CP + KS +
Sbjct: 22 QAGMKPGEGCFLCKSKDHIAKHCPTKSEKDHRKNYMCLGCRMWGHTLKNCPSEFKSA--D 79
Query: 249 AQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFR 305
++C CG GH + C N +C++C+ GHL C N + P SC
Sbjct: 80 VKLCYNCGQPGHSLDKCPNPLKDGGSAFAECFLCKQRGHLSKNCPDNKNGIYPKGGSCKI 139
Query: 306 CGQLGH 311
C Q+ H
Sbjct: 140 CEQVTH 145
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Query: 208 VCGSLEHGVRQCS--KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
V S +H +RQ + CF+CK H AK CP K + + +CL C GH + +C
Sbjct: 12 VASSSKHPLRQAGMKPGEGCFLCKSKDHIAKHCPTKSEKDHRKNYMCLGCRMWGHTLKNC 71
Query: 266 RNSYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+ + D+K CY C GH C + D CF C Q GH
Sbjct: 72 PSEFKSADVK--LCYNCGQPGHSLDKCPNPLKDGGSAFAECFLCKQRGH 118
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 13/84 (15%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRK----KPCFVCGSLEHGVRQCS--------KAQDCFIC 228
+ CYNCG+ GH C + +K CF+C H + C K C IC
Sbjct: 81 KLCYNCGQPGHSLDKCPNPLKDGGSAFAECFLCKQRGHLSKNCPDNKNGIYPKGGSCKIC 140
Query: 229 KKGGHRAKDCPDKHKSGFQ-NAQV 251
++ H AKDCP K+ F NA++
Sbjct: 141 EQVTHLAKDCPQKNSGKFAGNARI 164
>gi|270011877|gb|EFA08325.1| hypothetical protein TcasGA2_TC005967 [Tribolium castaneum]
Length = 486
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 221 KAQDCFICKKGGHRAKDCPDKHKSGFQNA--QVCLKCGDSGHDMFSCRNSYSLDDLKEVQ 278
K + CF C+K GH +CP+ K +++ +C KCG + H F C+ + K Q
Sbjct: 334 KKKVCFNCRKSGHNLSECPELGKEIAESSGTGICFKCGSTEHTHFECK-VVRGQEFKFAQ 392
Query: 279 CYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
C+IC GH+ C N P +C CG + H
Sbjct: 393 CFICHEQGHIARQCPDNARGLYPKGGACKVCGDVTH 428
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 39/93 (41%), Gaps = 13/93 (13%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKP------CFVCGSLEHGVRQCS-------KAQDCFI 227
+ C+NC + GH C K CF CGS EH +C K CFI
Sbjct: 336 KVCFNCRKSGHNLSECPELGKEIAESSGTGICFKCGSTEHTHFECKVVRGQEFKFAQCFI 395
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
C + GH A+ CPD + + C CGD H
Sbjct: 396 CHEQGHIARQCPDNARGLYPKGGACKVCGDVTH 428
>gi|225449579|ref|XP_002283925.1| PREDICTED: cellular nucleic acid-binding protein [Vitis vinifera]
gi|296086261|emb|CBI31702.3| unnamed protein product [Vitis vinifera]
Length = 238
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 70/191 (36%), Gaps = 41/191 (21%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
C NCG GH+A C S C+ C H QC C +C K GH A+DC
Sbjct: 59 VCNNCGLPGHIAAECNSTTM----CWNCKESGHLASQCPNDPVCHMCGKMGHLARDCSSP 114
Query: 242 HKSGFQNAQVCLKCGDSGHDMFSCRNS-----------YSLDDLKEVQCYICRCFGHLC- 289
+A++C C GH C N + D L E C IC GH+
Sbjct: 115 GLPA-HDARLCNNCYKPGHIAADCTNEKACNNCHKTGHLARDCLNEPVCNICNISGHVAR 173
Query: 290 -CVNISDAVPG------EVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCG 342
C S VP +++C CGQ GH S C NCG
Sbjct: 174 QCPK-SRLVPETGGPFRDITCHNCGQPGHISRDC----------------VSIVICNNCG 216
Query: 343 AEGHFARECVS 353
GH + EC S
Sbjct: 217 GRGHQSFECPS 227
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 73/186 (39%), Gaps = 33/186 (17%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK- 241
C C GH A +C + C CG H +C+ C+ CK+ GH A CP+
Sbjct: 41 CNKCKRPGHFARDCPNVTV----CNNCGLPGHIAAECNSTTMCWNCKESGHLASQCPNDP 96
Query: 242 --HKSGFQN--AQVCLKCGDSGHDMFSCRNSY-----SLDDLKEVQCYICRCFGHLC--C 290
H G A+ C G HD C N Y + D E C C GHL C
Sbjct: 97 VCHMCGKMGHLARDCSSPGLPAHDARLCNNCYKPGHIAADCTNEKACNNCHKTGHLARDC 156
Query: 291 VNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPS---SCYNCGAEGHF 347
+N E C C GH + C +SR P +C+NCG GH
Sbjct: 157 LN-------EPVCNICNISGHVA-------RQCPKSRLVPETGGPFRDITCHNCGQPGHI 202
Query: 348 ARECVS 353
+R+CVS
Sbjct: 203 SRDCVS 208
>gi|389624465|ref|XP_003709886.1| hypothetical protein MGG_09256 [Magnaporthe oryzae 70-15]
gi|351649415|gb|EHA57274.1| hypothetical protein MGG_09256 [Magnaporthe oryzae 70-15]
gi|440472467|gb|ELQ41325.1| hypothetical protein OOU_Y34scaffold00283g18 [Magnaporthe oryzae
Y34]
gi|440483150|gb|ELQ63582.1| hypothetical protein OOW_P131scaffold00971g7 [Magnaporthe oryzae
P131]
Length = 695
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 55/140 (39%), Gaps = 23/140 (16%)
Query: 218 QCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
+ SK C IC K GHRA DCP C C + H C K V
Sbjct: 394 RASKTDFCVICAKNGHRANDCP---------PPTCRHCQNQDHTSAQC--------PKRV 436
Query: 278 QCYICRCFGHL---CCVNISDAV-PGEVSCFRCGQLGHTGLHWNS--CMQACARSRGETV 331
+C C+ GH+ C ++ A E+ C C H S C V
Sbjct: 437 RCTKCQHLGHIKKSCPEKLASAAGEAELECAVCCATDHLEDDCESLWCTYYPDPENIVKV 496
Query: 332 EASPSSCYNCGAEGHFAREC 351
++ P+ CY+CGA+ HF +C
Sbjct: 497 QSIPAFCYSCGADNHFGGDC 516
>gi|391333168|ref|XP_003740993.1| PREDICTED: uncharacterized protein LOC100904700 [Metaseiulus
occidentalis]
Length = 1180
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 173 FDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGG 232
F+ P Q C+NC + GH+A C+ + C+ CG +H + C + C++C K G
Sbjct: 206 FEQP----QCCFNCQKFGHLAHECKEGKAEGRRCYRCGKEDHIAKDCEASPSCYVCGKNG 261
Query: 233 HRA--KDCPDKHKSG 245
HRA + CP + +
Sbjct: 262 HRADSRSCPAQREQA 276
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 44/115 (38%), Gaps = 24/115 (20%)
Query: 185 NCGEEGHMAVNCRSAVKRKKP--CFVCGSLEH----------GVRQCSKAQDCFICKKGG 232
N GE R+AV R P F+ L+ + Q + Q CF C+K G
Sbjct: 160 NLGEVQAGRAGTRTAVMRVSPSRAFMLLQLQELRVGWSGCRCRITQFEQPQCCFNCQKFG 219
Query: 233 HRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGH 287
H A +C K G + C +CG H C S S CY+C GH
Sbjct: 220 HLAHEC----KEGKAEGRRCYRCGKEDHIAKDCEASPS--------CYVCGKNGH 262
>gi|326480350|gb|EGE04360.1| zinc knuckle transcription factor [Trichophyton equinum CBS 127.97]
Length = 473
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 40/95 (42%), Gaps = 10/95 (10%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ----DCFICKKGGHRAKD 237
TC NCG+ GH A C K CF CG H C + C +C+K GH A +
Sbjct: 52 TCRNCGQAGHFARECPEPRKPSGACFNCGQEGHNKSDCPNPRVFTGTCRVCEKEGHPAAE 111
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
CPD+ +C C GH C + L+
Sbjct: 112 CPDRP------PDICKNCKGEGHKTMECTENRKLE 140
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 69/167 (41%), Gaps = 34/167 (20%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCR---SAVKR-KKPCFVCGSLEHGVRQCSKAQ----DCF 226
P DR C NCG+ GH+ +C+ S V+R + C C H R C +A+ C
Sbjct: 260 PFDRQIPKCSNCGKMGHIMKSCKEELSVVERVEVKCVNCKQPGHRARDCKEARVDRFACR 319
Query: 227 ICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGH---------DMFSCRNSYSLD----- 272
C KGGHR+ D+ + C +C + GH +CRN S D
Sbjct: 320 NCGKGGHRSN---DRTEPRSAEGVECKRCNEVGHFAKDCPQGGGSRACRNCGSEDHIARD 376
Query: 273 -----DLKEVQCYICRCFGHLC--CVNISDAVPGEVSCFRCGQLGHT 312
++ V C C GH C D +V C CG++GHT
Sbjct: 377 CDQPRNMANVTCRNCEEMGHFSRDCTKKKDW--SKVKCSCCGEMGHT 421
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 252 CLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGH 311
C CG GH M SC+ S+ + EV+C C+ GH + +A +C CG+ GH
Sbjct: 268 CSNCGKMGHIMKSCKEELSVVERVEVKCVNCKQPGHR-ARDCKEARVDRFACRNCGKGGH 326
Query: 312 -----------TGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
G+ C + ++ +C NCG+E H AR+C
Sbjct: 327 RSNDRTEPRSAEGVECKRCNEVGHFAKDCPQGGGSRACRNCGSEDHIARDC 377
>gi|426236129|ref|XP_004012026.1| PREDICTED: zinc finger CCHC domain-containing protein 9-like [Ovis
aries]
Length = 180
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 14/111 (12%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CF 226
+ C++C + GH +C +A++ ++ C+ CGS EH + +C D CF
Sbjct: 37 KVCFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCF 96
Query: 227 ICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
+C + GH ++ CPD K + + C CG H C S + D + V
Sbjct: 97 VCGEMGHLSRSCPDNPKGLYADGGGCRLCGSVEHMKKDCPKSQNSDRMVTV 147
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLDDLKEVQCYIC 282
CF C++ GH DCP ++ +C +CG + H++ C+ +L + +C++C
Sbjct: 39 CFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFVC 98
Query: 283 RCFGHL 288
GHL
Sbjct: 99 GEMGHL 104
>gi|320166376|gb|EFW43275.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1075
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 5/125 (4%)
Query: 171 RYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKK 230
RYF D G C+NC + GH++ +C + +R PC++CG H +C Q C+ C
Sbjct: 351 RYFVGFDAGRIRCHNCDQMGHISRDCPNK-RRVSPCYLCGEPGHTRFKCPN-QTCYACFG 408
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCC 290
GH +DC + + +C +C GH +C + + + C L
Sbjct: 409 AGHMMRDC---RRRAAKPHILCRRCKMRGHFEANCTDVWRQYHHQHAALRESSCRDFLGF 465
Query: 291 VNISD 295
N+ D
Sbjct: 466 PNLRD 470
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 35/87 (40%), Gaps = 14/87 (16%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
C C + GH ++DCP+K + C CG+ GH F C N CY C
Sbjct: 363 CHNCDQMGHISRDCPNKRR-----VSPCYLCGEPGHTRFKCPNQ---------TCYACFG 408
Query: 285 FGHLCCVNISDAVPGEVSCFRCGQLGH 311
GH+ A + C RC GH
Sbjct: 409 AGHMMRDCRRRAAKPHILCRRCKMRGH 435
>gi|331231943|ref|XP_003328634.1| hypothetical protein PGTG_10593 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309307624|gb|EFP84215.1| hypothetical protein PGTG_10593 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 153
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 204 KPCFVCGSLEHGVRQC-SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDM 262
+ CF CG+L H QC ++++ C+ CK+ GH + CP+ G Q C CG GH
Sbjct: 7 RACFKCGALGHLAEQCPAESRLCYNCKQSGHESASCPNPRTGGVDGRQ-CFTCGGFGHLA 65
Query: 263 FSCRNSYSLDD-------LKEVQCYICRCFGHL 288
C ++ +L + +CY C FGH+
Sbjct: 66 ADCPSATTLGNRIAGVGSFGGTKCYTCGQFGHV 98
>gi|38491606|gb|AAR22005.1| gag protein [Human immunodeficiency virus 1]
Length = 484
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ + ++ R RGPR C+NCG+EGH+A NC++ RKK C+ C
Sbjct: 360 EAMSQVQQAGIMMQRSNFRGPRTIK--------CFNCGKEGHLARNCKAP--RKKGCWKC 409
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 410 GKEGHQMKDCTERQANFLGK 429
>gi|347596136|gb|AEP14044.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSNVQHANIMMQRGNFKGPRKIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|291394962|ref|XP_002713967.1| PREDICTED: zinc finger, CCHC domain containing 9 [Oryctolagus
cuniculus]
Length = 263
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 14/97 (14%)
Query: 178 RGWQTCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD--------- 224
R C++C + GH +C +A++ ++ C+ CGS EH + +C D
Sbjct: 117 RNAMVCFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEITKCKAKIDPALGEFPFA 176
Query: 225 -CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
CF+C + GH ++ CPD K + + C CG H
Sbjct: 177 KCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEH 213
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C++ GH DCP ++ +C +CG + H++ C+ +L
Sbjct: 112 RQAAKRNAMVCFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEITKCKAKIDPALG 171
Query: 273 DLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+ +C++C GHL C N C CG + H
Sbjct: 172 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEH 213
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 15/117 (12%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGH---LCCVNISDAV 297
K ++ +NA VC C GH + C + ++ CY C H C I A+
Sbjct: 111 KRQAAKRNAMVCFHCRQPGHGIADCPAALENQEMGTGICYRCGSTEHEITKCKAKIDPAL 170
Query: 298 PGEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
GE CF CG++GH SC + + A C CG+ H ++C
Sbjct: 171 -GEFPFAKCFVCGEMGHLS---RSCP-----DNPKGLYADGGGCKLCGSVEHLKKDC 218
>gi|297798314|ref|XP_002867041.1| hypothetical protein ARALYDRAFT_491032 [Arabidopsis lyrata subsp.
lyrata]
gi|297312877|gb|EFH43300.1| hypothetical protein ARALYDRAFT_491032 [Arabidopsis lyrata subsp.
lyrata]
Length = 257
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 65/181 (35%), Gaps = 38/181 (20%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCP--- 239
CYNCGE GH+ + S+ + C+ C GH A+DC
Sbjct: 101 CYNCGELGHIGGGSGGGERG-----------------SRREGCYNCGDAGHFARDCTQKS 143
Query: 240 ----DKHKSGFQNAQVCLKCGDSGHDMFSCRN-----SYSLDDLKEVQCYICRCFGHLCC 290
D+ + C CGD GH C N CY C GH+
Sbjct: 144 VGNGDQRGAAGAGKDGCYNCGDIGHFARDCGNQKVTAGSVRSGGGSGSCYTCGGVGHIAR 203
Query: 291 VNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARE 350
+ P C++CG GH C Q R + CY+CG EGHFARE
Sbjct: 204 ECATKRQPSR-GCYQCGGSGHLA---RDCDQ-----RASGGNGGGNKCYSCGKEGHFARE 254
Query: 351 C 351
C
Sbjct: 255 C 255
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 13/100 (13%)
Query: 179 GWQTCYNCGEEGHMAVNC---------RSAVKRKKPCFVCGSLEHGVRQCSK----AQDC 225
G CYNCG+ GH A +C + C+ CG + H R+C+ ++ C
Sbjct: 156 GKDGCYNCGDIGHFARDCGNQKVTAGSVRSGGGSGSCYTCGGVGHIARECATKRQPSRGC 215
Query: 226 FICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
+ C GH A+DC + G C CG GH C
Sbjct: 216 YQCGGSGHLARDCDQRASGGNGGGNKCYSCGKEGHFAREC 255
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK--------AQDCFICKKGGHR 234
CY CG GH+A C + + + C+ CG H R C + C+ C K GH
Sbjct: 192 CYTCGGVGHIARECATKRQPSRGCYQCGGSGHLARDCDQRASGGNGGGNKCYSCGKEGHF 251
Query: 235 AKDCP 239
A++C
Sbjct: 252 ARECS 256
>gi|238504168|ref|XP_002383316.1| zinc knuckle transcription factor (CnjB), putative [Aspergillus
flavus NRRL3357]
gi|220690787|gb|EED47136.1| zinc knuckle transcription factor (CnjB), putative [Aspergillus
flavus NRRL3357]
Length = 482
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 56/137 (40%), Gaps = 17/137 (12%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRAKD 237
C NC GH A +C + + C CGS EH +C ++ +C C + GH AKD
Sbjct: 297 CVNCSAVGHRARDCTEPRRDRFACRNCGSSEHKAAECPNPRSAEGVECKRCNEVGHFAKD 356
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISD 295
CP + C CG H C D+ V C C GH C D
Sbjct: 357 CPQAPAP-----RTCRNCGSEDHIARDCDKPR---DISTVTCRNCDEVGHFSRDCPKKKD 408
Query: 296 AVPGEVSCFRCGQLGHT 312
+V C CG++GHT
Sbjct: 409 W--SKVKCNNCGEMGHT 423
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 13/94 (13%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ----DCFICKKGGHRAKDC 238
C NCG +GH A NC ++ CF CG E G +C+K + C +C + GH A C
Sbjct: 58 CRNCGSDGHFARNCPEP-RKGMACFNCG--EEGKAECTKPRVFKGTCRVCNQEGHPASQC 114
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
P++ VC C GH C+ + D
Sbjct: 115 PERP------PDVCKNCKMEGHRTIDCKENRKFD 142
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 59/157 (37%), Gaps = 39/157 (24%)
Query: 252 CLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGH------------LCCVNISDA--- 296
C CG+ GH C+ + + + EV+C C GH C N +
Sbjct: 270 CSNCGEMGHTARGCKEEHVVHERVEVKCVNCSAVGHRARDCTEPRRDRFACRNCGSSEHK 329
Query: 297 ---VPGE-----VSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFA 348
P V C RC ++GH C QA +P +C NCG+E H A
Sbjct: 330 AAECPNPRSAEGVECKRCNEVGHFA---KDCPQA----------PAPRTCRNCGSEDHIA 376
Query: 349 RECVSS---SKVRKRNIDASTPTFRPHRENKDHSGIK 382
R+C S V RN D R + KD S +K
Sbjct: 377 RDCDKPRDISTVTCRNCDEVGHFSRDCPKKKDWSKVK 413
>gi|164662623|ref|XP_001732433.1| hypothetical protein MGL_0208 [Malassezia globosa CBS 7966]
gi|159106336|gb|EDP45219.1| hypothetical protein MGL_0208 [Malassezia globosa CBS 7966]
Length = 200
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 50/132 (37%), Gaps = 36/132 (27%)
Query: 225 CFICKKGGHRAKDCPDK---HKSGFQNAQVCLKCGDSGHDMFSCRNSYS--LDDLKEVQC 279
CF+C+ H AKDCP G +C +CG + H + CR S D+L C
Sbjct: 27 CFVCRAFSHAAKDCPHNVSGDTQGKDTVGICFRCGSTEHSLAQCRRPRSEQADELPFATC 86
Query: 280 YICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCY 339
YIC GHL C +++G++V C
Sbjct: 87 YICSEKGHL-------------------------------ASKCPQNKGKSVYPDGGECK 115
Query: 340 NCGAEGHFAREC 351
CG+ H AR+C
Sbjct: 116 VCGSVEHLARDC 127
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 41/101 (40%), Gaps = 18/101 (17%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP-------CFVCGSLEHGVRQCSKAQD----------C 225
C+ C H A +C V CF CGS EH + QC + + C
Sbjct: 27 CFVCRAFSHAAKDCPHNVSGDTQGKDTVGICFRCGSTEHSLAQCRRPRSEQADELPFATC 86
Query: 226 FICKKGGHRAKDCP-DKHKSGFQNAQVCLKCGDSGHDMFSC 265
+IC + GH A CP +K KS + + C CG H C
Sbjct: 87 YICSEKGHLASKCPQNKGKSVYPDGGECKVCGSVEHLARDC 127
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 168 RGPRYFDPPDRGWQTCYNCGEEGHMAVNC-----RSAVKRKKPCFVCGSLEHGVRQCSK 221
R PR + + TCY C E+GH+A C +S C VCGS+EH R C +
Sbjct: 71 RRPRSEQADELPFATCYICSEKGHLASKCPQNKGKSVYPDGGECKVCGSVEHLARDCPR 129
>gi|119499962|ref|XP_001266738.1| zinc knuckle transcription factor (CnjB), putative [Neosartorya
fischeri NRRL 181]
gi|119414903|gb|EAW24841.1| zinc knuckle transcription factor (CnjB), putative [Neosartorya
fischeri NRRL 181]
Length = 491
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 62/160 (38%), Gaps = 20/160 (12%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKG 231
DR C NC GH A +C + C CGS EH C ++ +C C +
Sbjct: 302 DRVEVKCVNCNASGHRARDCTEPRVDRFACRNCGSPEHKAADCPNPRSAEGVECKRCNEM 361
Query: 232 GHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC-- 289
GH AKDCP + C CG H C D+ V C C GH
Sbjct: 362 GHFAKDCPQAPAP-----RTCRNCGSEDHMARDCDKPR---DVSTVTCRNCEEVGHFSRD 413
Query: 290 CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGE 329
C D +V C CG++GH C QA + S G+
Sbjct: 414 CPQKKDW--SKVKCNNCGEMGHI---IKRCPQAASESFGQ 448
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 13/100 (13%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ----DCFICKKGGHRAKDC 238
C NCG + H A C ++ CF CG H +C+K + C IC K GH A +C
Sbjct: 67 CRNCGGDSHFARECPEP-RKGMACFNCGEEGHSKAECTKPRVFKGPCRICSKEGHPAAEC 125
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNS--YSLDDLKE 276
PD+ VC C GH C + + L+D+ +
Sbjct: 126 PDRP------PDVCKNCQSEGHKTIECTENRKFDLNDIPD 159
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 58/157 (36%), Gaps = 39/157 (24%)
Query: 252 CLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGH------------LCCVNISDA--- 296
C CG+ GH C+ +L D EV+C C GH C N
Sbjct: 281 CSNCGEMGHTARGCKEERALVDRVEVKCVNCNASGHRARDCTEPRVDRFACRNCGSPEHK 340
Query: 297 ---VPGE-----VSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFA 348
P V C RC ++GH C QA +P +C NCG+E H A
Sbjct: 341 AADCPNPRSAEGVECKRCNEMGHFA---KDCPQA----------PAPRTCRNCGSEDHMA 387
Query: 349 RECVSS---SKVRKRNIDASTPTFRPHRENKDHSGIK 382
R+C S V RN + R + KD S +K
Sbjct: 388 RDCDKPRDVSTVTCRNCEEVGHFSRDCPQKKDWSKVK 424
>gi|328834365|gb|AEB52782.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 11/81 (13%)
Query: 150 EGVTTVEISDNIVLRKL-LRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFV 208
E ++ VE ++ ++++K RGP+ C+NCG+EGH+A NCR+ RKK C+
Sbjct: 365 EAMSQVENANIMMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWK 414
Query: 209 CGSLEHGVRQCSKAQDCFICK 229
CG H ++ C++ Q F+ K
Sbjct: 415 CGKEGHQMKDCTERQANFLGK 435
>gi|302757968|ref|XP_002962407.1| hypothetical protein SELMODRAFT_438147 [Selaginella moellendorffii]
gi|300169268|gb|EFJ35870.1| hypothetical protein SELMODRAFT_438147 [Selaginella moellendorffii]
Length = 1326
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 27/168 (16%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVKR--KKPCFVCGSLEHGVRQCSKAQDCFICKKGGHR 234
+R ++C+NCG+ GH++ C +R + P + S + R+ + + C+ C + GH+
Sbjct: 252 ERDRRSCFNCGKVGHLSAQCPLKTERGERSPKRLRPSEDD--RKRGRGKQCYNCGEEGHK 309
Query: 235 AKDCPDKHKSGFQNAQ---------VCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCF 285
++ CP K N + C C +SGH +F C +S D + R
Sbjct: 310 SRVCPRKVSVSVTNKEDGGRRADEKRCFNCHESGHLLFEC-PMFSDGDAPRNES--ARSV 366
Query: 286 GHLCCV----NISDAVPGEV----SCFRCGQLGHTGLHWNSCMQACAR 325
G CV ++DA + CF CG+ GH + SC Q+ R
Sbjct: 367 GDNACVLYKTKLTDAEKNQYLRQNKCFTCGKSGHP---YYSCPQSEKR 411
>gi|554837|gb|AAA44313.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 492
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ S+ ++ R +G R F C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 367 EAMSQVQQSNIMMQRGNFKGQRKFV-------KCFNCGKEGHIAKNCRAP--RKKGCWKC 417
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q FI K
Sbjct: 418 GKEGHQMKDCTERQANFIGK 437
>gi|9886937|gb|AAG01663.1| gag protein [Human immunodeficiency virus 1]
Length = 470
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ S+ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 339 EAMSQVQQSNIMMQRXNFKGPRRSI-------KCFNCGKEGHLARNCRAP--RKKGCWKC 389
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 390 GKEGHQMKDCTERQANFLGK 409
>gi|426198291|gb|EKV48217.1| hypothetical protein AGABI2DRAFT_117040 [Agaricus bisporus var.
bisporus H97]
Length = 645
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 75/199 (37%), Gaps = 44/199 (22%)
Query: 171 RYFDPPD-----RGWQTCYNCGEEG-HMAVNCRSAVKRKKPCFVCGSL-EHGVRQCSKAQ 223
RYF+ P+ C NCG EG H +CR + C CG+ EH + C ++
Sbjct: 200 RYFEEPEDESIKLKRTVCKNCGAEGDHKTADCRVLI-----CLTCGARDEHVTKSCPVSK 254
Query: 224 DCFICKKGGHRAKDCPDKHKSGFQNAQ---VCLKCGDSGHDMFSCRNSYSLDDLKEVQCY 280
CF C GH +CP++H + +N + C +C H C +
Sbjct: 255 VCFSCGMKGHININCPNRHLNRARNHESLDYCKRCSSELHQTTECPTWW----------- 303
Query: 281 ICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYN 340
R + ++ + + + S G LG GE A CYN
Sbjct: 304 --RLYVYVADDDRTQTLDERRSKRDLG-LGKG---------------GEGYIAEDEWCYN 345
Query: 341 CGAEGHFARECVSSSKVRK 359
CG GH+ +C S + K
Sbjct: 346 CGEAGHWGDDCEGSKRYDK 364
>gi|77416891|sp|P24740.3|POL_HV1U4 RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol;
Contains: RecName: Full=Matrix protein p17; Short=MA;
Contains: RecName: Full=Capsid protein p24; Short=CA;
Contains: RecName: Full=Spacer peptide p2; Contains:
RecName: Full=Nucleocapsid protein p7; Short=NC;
Contains: RecName: Full=Transframe peptide; Short=TF;
Contains: RecName: Full=p6-pol; Short=p6*; Contains:
RecName: Full=Protease; AltName: Full=PR; AltName:
Full=Retropepsin; Contains: RecName: Full=Reverse
transcriptase/ribonuclease H; AltName:
Full=Exoribonuclease H; AltName: Full=p66 RT; Contains:
RecName: Full=p51 RT; Contains: RecName: Full=p15;
Contains: RecName: Full=Integrase; Short=IN
Length = 1428
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ + ++ R RGPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 361 EAMSQVQQTSIMMQRGNFRGPRRIK--------CFNCGKEGHLAKNCRAP--RKKGCWKC 410
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 411 GKEGHQMKDCTERQANFL 428
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C G GH A A+ + + + ++ G + + CF C K GH AK+C
Sbjct: 346 CQGVGGPGHKARVLAEAMSQVQQTSIM--MQRGNFRGPRRIKCFNCGKEGHLAKNCRAPR 403
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 404 KKG------CWKCGKEGHQMKDC 420
>gi|403264382|ref|XP_003924463.1| PREDICTED: zinc finger CCHC domain-containing protein 9-like
[Saimiri boliviensis boliviensis]
Length = 272
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C +A++ + C+ CGS EH + +C D CF+
Sbjct: 130 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 189
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
C + GH ++ CPD K + + C CG H C S + D + V
Sbjct: 190 CGEMGHPSRACPDNPKGLYADGGGCKLCGSVEHLKKDCPESQNSDRMVRV 239
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C+K GH DCP ++ +C +CG + H++ C+ +L
Sbjct: 121 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 180
Query: 273 DLKEVQCYICRCFGH---LCCVNISDAVPGEVSCFRCGQLGH 311
+ +C++C GH C N C CG + H
Sbjct: 181 EFPFAKCFVCGEMGHPSRACPDNPKGLYADGGGCKLCGSVEH 222
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVP 298
K ++ +NA VC C GH + C + D+ CY C H C D
Sbjct: 120 KRQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPAL 179
Query: 299 GEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
GE CF CG++GH +AC + + A C CG+ H ++C S
Sbjct: 180 GEFPFAKCFVCGEMGHPS-------RACP-DNPKGLYADGGGCKLCGSVEHLKKDCPES 230
>gi|63098362|gb|AAY32407.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 10/73 (13%)
Query: 158 SDNIVLRKL-LRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGV 216
S+NI+++K +GPR C+NCG+EGH+A NCR+ RKK C+ CG H +
Sbjct: 369 SNNIMMQKSNFKGPRRII-------KCFNCGKEGHLAKNCRAP--RKKGCWKCGKEGHQM 419
Query: 217 RQCSKAQDCFICK 229
+ C++ Q F+ K
Sbjct: 420 KDCTERQANFLGK 432
>gi|429249308|gb|AFZ77698.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + + +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQQTNIMMQKGIFKGPKRIK--------CFNCGKEGHLAKNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 415 GKEGHQMKDCTERQANFL 432
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C G GH A A+ + + + ++ G+ + K CF C K GH AK+C
Sbjct: 350 CQGVGGPGHKARVLAEAMSQVQQTNIM--MQKGIFKGPKRIKCFNCGKEGHLAKNCRAPR 407
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 408 KKG------CWKCGKEGHQMKDC 424
>gi|373842380|gb|AEY77179.1| gag protein [Human immunodeficiency virus]
Length = 495
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + + +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQHTNIMMQKGIFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 212 LEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
++ G+ + K CF C K GH A++C K G C KCG GH M C
Sbjct: 377 MQKGIFKGPKRIKCFNCGKEGHLARNCRAPRKKG------CWKCGKEGHQMKDC 424
>gi|373842358|gb|AEY77168.1| gag protein [Human immunodeficiency virus]
Length = 498
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + + +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSXVQHTNIMMQKGIFKGPKRIK--------CFNCGKEGHLAKNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCNERQANFLGK 434
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
C G GH A A+ + + ++ G+ + K CF C K GH AK+C
Sbjct: 349 ACQGVGGPGHKARVLAEAMSXVQHTNIM--MQKGIFKGPKRIKCFNCGKEGHLAKNCRAP 406
Query: 242 HKSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 407 RKKG------CWKCGKEGHQMKDC 424
>gi|195954494|gb|ACG58940.1| gag protein [Human immunodeficiency virus 1]
gi|238734212|gb|ACR55444.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 11/81 (13%)
Query: 150 EGVTTVEISDNIVL-RKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFV 208
E ++ V NI++ R RGPR C+NCG+EGH+A NC++ RKK C+
Sbjct: 363 EAMSQVAQQTNIMMQRGNFRGPRKIK--------CFNCGKEGHLARNCKAP--RKKGCWK 412
Query: 209 CGSLEHGVRQCSKAQDCFICK 229
CG H ++ C++ Q F+ K
Sbjct: 413 CGKEGHQMKDCTERQANFLGK 433
>gi|47117592|sp|Q8R1J3.1|ZCHC9_MOUSE RecName: Full=Zinc finger CCHC domain-containing protein 9
gi|19353581|gb|AAH24496.1| Zinc finger, CCHC domain containing 9 [Mus musculus]
Length = 273
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C++ GH DCP +S +C +CG + H+M CR + +L
Sbjct: 120 RQAAKKNAMVCFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMSKCRANVDPALG 179
Query: 273 DLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+ +C++C GHL C N SC CG + H
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCPDNTKGVYADGGSCKLCGSVEH 221
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C + ++ + C+ CGS EH + +C D CF+
Sbjct: 129 VCFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMSKCRANVDPALGEFPFAKCFV 188
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
C + GH ++ CPD K + + C CG H CR + + D + V
Sbjct: 189 CGEMGHLSRSCPDNTKGVYADGGSCKLCGSVEHFKKDCRENQNSDRIITV 238
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGH---LCCVNISDAV 297
K ++ +NA VC C GH + C D+ CY C H C N+ A+
Sbjct: 119 KRQAAKKNAMVCFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMSKCRANVDPAL 178
Query: 298 PGEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
GE CF CG++GH SC ++G V A SC CG+ HF ++C
Sbjct: 179 -GEFPFAKCFVCGEMGHLS---RSCPD---NTKG--VYADGGSCKLCGSVEHFKKDC 226
>gi|299747608|ref|XP_001837149.2| hypothetical protein CC1G_00285 [Coprinopsis cinerea okayama7#130]
gi|298407597|gb|EAU84766.2| hypothetical protein CC1G_00285 [Coprinopsis cinerea okayama7#130]
Length = 545
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 109/286 (38%), Gaps = 44/286 (15%)
Query: 149 DEGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEG-HMAVNCRSAVKRKKPCF 207
D+ + ++ DN V R+ R C +CG EG H C + C
Sbjct: 151 DDSIQFLDYDDNKVFRRYWEDQEPIKNATR--VVCKHCGAEGQHKTYECTVVI-----CL 203
Query: 208 VCGSLE-HGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQV---CLKCGDSGHDMF 263
CG+ + H R C ++ CF C GH CP+++ +G + + C +C + H
Sbjct: 204 TCGARDDHPTRSCPISKVCFSCGMKGHINATCPNRYGNGVRISSRFVDCERCSSTQHKTN 263
Query: 264 SC----RNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVS----CFRCGQLGHTGLH 315
C R L D+ +V R C + + G ++ C+ CG GH G
Sbjct: 264 ECPTWWRMYAYLSDVAQVNVLALRREKRDC--KLGEGGEGYIAEDQWCYSCGNSGHLG-- 319
Query: 316 WNSCMQACARSRGETVEASPSSCYNCGAEGHF---ARECVSSSKVRKRNIDASTPTFRPH 372
+ C + ++ E S S YN A G F +E +S K + R RP
Sbjct: 320 -DDCPENSQFNQDH--EHSAFSMYNV-ASGPFYDPEKEASNSKKAQSRP--------RPK 367
Query: 373 RENKDHSGIKSAPHDLGKVHKRKKTQHEERGIMTSRKSKQRGGWIT 418
D ++ P D+G+ K K G MT++ W +
Sbjct: 368 ESFMD---LERVPDDVGRRGKEKAKSR--LGKMTAKVDDDPDDWFS 408
>gi|403256355|ref|XP_003920846.1| PREDICTED: zinc finger CCHC domain-containing protein 9 [Saimiri
boliviensis boliviensis]
Length = 272
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C +A++ + C+ CGS EH + +C D CF+
Sbjct: 130 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 189
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
C + GH ++ CPD K + + C CG H C S + D + V
Sbjct: 190 CGEMGHLSRACPDNPKGLYADGGGCKLCGSVEHLKKDCPESQNSDRMVTV 239
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C+K GH DCP ++ +C +CG + H++ C+ +L
Sbjct: 121 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 180
Query: 273 DLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+ +C++C GHL C N C CG + H
Sbjct: 181 EFPFAKCFVCGEMGHLSRACPDNPKGLYADGGGCKLCGSVEH 222
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVP 298
K ++ +NA VC C GH + C + D+ CY C H C D
Sbjct: 120 KRQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPAL 179
Query: 299 GEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
GE CF CG++GH +AC + + A C CG+ H ++C S
Sbjct: 180 GEFPFAKCFVCGEMGHLS-------RACP-DNPKGLYADGGGCKLCGSVEHLKKDCPES 230
>gi|429249208|gb|AFZ77648.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + + +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQHTNIMMQKGIFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C G GH A A+ + + + ++ G+ + K CF C K GH A++C
Sbjct: 350 CQGVGGPGHKARVLAEAMSQVQHTNIM--MQKGIFKGPKRIKCFNCGKEGHLARNCRAPR 407
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 408 KKG------CWKCGKEGHQMKDC 424
>gi|407736117|gb|AFU29432.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSHVQNTNIMMQRGNFKGPRKIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|33331455|gb|AAQ10901.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ + ++ R RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQQPNIMMQRGNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|407736172|gb|AFU29480.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSHVQNTNIMMQRGNFKGPRKIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|117647247|ref|NP_663428.2| zinc finger CCHC domain-containing protein 9 [Mus musculus]
Length = 271
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C++ GH DCP +S +C +CG + H+M CR + +L
Sbjct: 120 RQAAKKNAMVCFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMSKCRANVDPALG 179
Query: 273 DLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+ +C++C GHL C N SC CG + H
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCPDNTKGVYADGGSCKLCGSVEH 221
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C + ++ + C+ CGS EH + +C D CF+
Sbjct: 129 VCFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMSKCRANVDPALGEFPFAKCFV 188
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
C + GH ++ CPD K + + C CG H CR + + D + V
Sbjct: 189 CGEMGHLSRSCPDNTKGVYADGGSCKLCGSVEHFKKDCRENQNSDRIITV 238
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGH---LCCVNISDAV 297
K ++ +NA VC C GH + C D+ CY C H C N+ A+
Sbjct: 119 KRQAAKKNAMVCFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMSKCRANVDPAL 178
Query: 298 PGEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
GE CF CG++GH SC ++G V A SC CG+ HF ++C
Sbjct: 179 -GEFPFAKCFVCGEMGHLS---RSCPD---NTKG--VYADGGSCKLCGSVEHFKKDC 226
>gi|429249286|gb|AFZ77687.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K + +GP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGIFKGPKRIK--------CFNCGKEGHLAKNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 212 LEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
++ G+ + K CF C K GH AK+C K G C KCG GH M C
Sbjct: 377 MQKGIFKGPKRIKCFNCGKEGHLAKNCRAPRKKG------CWKCGKEGHQMKDC 424
>gi|429249184|gb|AFZ77636.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K + +GP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGIFKGPKRIK--------CFNCGKEGHLAKNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 212 LEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
++ G+ + K CF C K GH AK+C K G C KCG GH M C
Sbjct: 377 MQKGIFKGPKRIKCFNCGKEGHLAKNCRAPRKKG------CWKCGKEGHQMKDC 424
>gi|407736164|gb|AFU29473.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSHVQNTNIMMQRGNFKGPRKIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|407736132|gb|AFU29445.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSHVQNTNIMMQRGNFKGPRKIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|406605205|emb|CCH43364.1| hypothetical protein BN7_2912 [Wickerhamomyces ciferrii]
Length = 378
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 66/164 (40%), Gaps = 25/164 (15%)
Query: 152 VTTVEISDNIVLRKLLRGP-RYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCG 210
++ +++DN LRG RYF C NC + GH NC++ V C CG
Sbjct: 23 LSIDQVNDNADELVDLRGEGRYFGSDQPSGILCSNCHQRGHKRANCKTVV-----CMACG 77
Query: 211 SL-EHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY 269
L +H + C K+ C C + GH C +K + + C CG + H C +
Sbjct: 78 MLDDHYSQHCPKSIVCSNCGEKGHYKNQCTEKQRRVY-----CQTCGSTRHFTDRCTS-- 130
Query: 270 SLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTG 313
I R + + N +P + C+ C + GH G
Sbjct: 131 -----------IWRSYLTVENANRKMGLPTNIYCYNCAEKGHYG 163
>gi|87131049|gb|ABD24129.1| gag protein [Human immunodeficiency virus 1]
Length = 493
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 360 EAMSQVHQTNIMMQRNNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 409
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 410 GKEGHQMKDCTERQANFLGK 429
>gi|327263026|ref|XP_003216322.1| PREDICTED: zinc finger CCHC domain-containing protein 9-like
[Anolis carolinensis]
Length = 262
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 14/105 (13%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C + ++ + CF CGS EH + +C D CFI
Sbjct: 120 VCFHCRQPGHGVADCPAVLESQDMGTGICFRCGSTEHEISKCRAKIDPALGEFPYAKCFI 179
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
C + GH ++ CPD K + + C CG H C + S D
Sbjct: 180 CGEMGHLSRSCPDNPKGLYAHGGSCRICGSVEHFKRDCPENQSSD 224
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 222 AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLDDLKEVQC 279
A CF C++ GH DCP +S +C +CG + H++ CR +L + +C
Sbjct: 118 AMVCFHCRQPGHGVADCPAVLESQDMGTGICFRCGSTEHEISKCRAKIDPALGEFPYAKC 177
Query: 280 YICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+IC GHL C N SC CG + H
Sbjct: 178 FICGEMGHLSRSCPDNPKGLYAHGGSCRICGSVEH 212
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 13/110 (11%)
Query: 247 QNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVPGEV--- 301
+NA VC C GH + C D+ C+ C H C D GE
Sbjct: 116 KNAMVCFHCRQPGHGVADCPAVLESQDMGTGICFRCGSTEHEISKCRAKIDPALGEFPYA 175
Query: 302 SCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
CF CG++GH ++C + + A SC CG+ HF R+C
Sbjct: 176 KCFICGEMGHLS-------RSCP-DNPKGLYAHGGSCRICGSVEHFKRDC 217
>gi|118426862|gb|ABK91182.1| gag protein [Human immunodeficiency virus 1]
Length = 168
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|118426846|gb|ABK91174.1| gag protein [Human immunodeficiency virus 1]
Length = 168
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|407736125|gb|AFU29439.1| gag protein [Human immunodeficiency virus 1]
gi|407736140|gb|AFU29452.1| gag protein [Human immunodeficiency virus 1]
gi|407736148|gb|AFU29459.1| gag protein [Human immunodeficiency virus 1]
gi|407736180|gb|AFU29487.1| gag protein [Human immunodeficiency virus 1]
gi|407736188|gb|AFU29494.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSHVQNTNIMMQRGNFKGPRKIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|409684237|gb|AFV34162.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K + +GP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGIFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C G H A A+ + + + ++ G+ + K CF C K GH A++C
Sbjct: 350 CQGVGGPSHKARVLAEAMSQAQQTNIM--MQKGIFKGPKRIKCFNCGKEGHLARNCRAPR 407
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 408 KKG------CWKCGKEGHQMKDC 424
>gi|407736156|gb|AFU29466.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSHVQNTNIMMQRGNFKGPRKIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|255716112|ref|XP_002554337.1| KLTH0F02904p [Lachancea thermotolerans]
gi|238935720|emb|CAR23900.1| KLTH0F02904p [Lachancea thermotolerans CBS 6340]
Length = 162
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 72/168 (42%), Gaps = 32/168 (19%)
Query: 203 KKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDM 262
+K C+VCG + H C + C+ C + GH DC F+ C CG++GH
Sbjct: 5 QKACYVCGKIGHLAEDCESERLCYNCNQPGHVQSDCTMAKTVEFKQ---CYNCGETGHVK 61
Query: 263 FSCRNSYSLDDLKEVQ-CYICRCFGHLC--CVN------ISDAVPG---EVSCFRCGQLG 310
C +VQ CY C GH+ C + A P +VSC+RCG
Sbjct: 62 SEC----------DVQRCYNCNQTGHISRDCADPKKPRFAGGAAPSRANKVSCYRCGGPN 111
Query: 311 HTG---LHWNSCMQACAR----SRGETVEASPSSCYNCGAEGHFAREC 351
H L +S AC + S+ +S +CYNC GH +R+C
Sbjct: 112 HMAKDCLQSDSKCYACGKVGHISKDCPAGSSAKTCYNCNEAGHISRDC 159
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 36/112 (32%)
Query: 180 WQTCYNCGEEGHMAVNC---------------RSAVKRKKP---------------CFVC 209
++ CYNCGE GH+ C R KKP C+ C
Sbjct: 48 FKQCYNCGETGHVKSECDVQRCYNCNQTGHISRDCADPKKPRFAGGAAPSRANKVSCYRC 107
Query: 210 GSLEHGVRQCSKAQD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
G H + C ++ C+ C K GH +KDCP +A+ C C ++GH
Sbjct: 108 GGPNHMAKDCLQSDSKCYACGKVGHISKDCP-----AGSSAKTCYNCNEAGH 154
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC---SKAQDCFICKKGGHRAKDC 238
+CY CG HMA +C ++ C+ CG + H + C S A+ C+ C + GH ++DC
Sbjct: 103 SCYRCGGPNHMAKDC---LQSDSKCYACGKVGHISKDCPAGSSAKTCYNCNEAGHISRDC 159
Query: 239 P 239
P
Sbjct: 160 P 160
>gi|348503938|ref|XP_003439519.1| PREDICTED: zinc finger CCHC domain-containing protein 9-like
[Oreochromis niloticus]
Length = 275
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 14/97 (14%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFIC 228
C+NC + GH +C A + ++ CF CGS EH + +C D CFIC
Sbjct: 136 CFNCRKPGHGLADCPEADRDEEMGRGICFRCGSTEHEIYKCKAKVDPALGDYPYAKCFIC 195
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
+ GH ++ CPD K + C CG H C
Sbjct: 196 GQTGHLSRSCPDNPKGLYAQGGCCHVCGSVEHFQKDC 232
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLDDLKEVQCYIC 282
CF C+K GH DCP+ + +C +CG + H+++ C+ +L D +C+IC
Sbjct: 136 CFNCRKPGHGLADCPEADRDEEMGRGICFRCGSTEHEIYKCKAKVDPALGDYPYAKCFIC 195
Query: 283 RCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
GHL C N C CG + H
Sbjct: 196 GQTGHLSRSCPDNPKGLYAQGGCCHVCGSVEH 227
>gi|118426904|gb|ABK91203.1| gag protein [Human immunodeficiency virus 1]
Length = 168
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|326416985|gb|ADZ73337.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSHVQHANILMQRGNFKGPRKIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|307182143|gb|EFN69486.1| Zinc finger CCHC domain-containing protein 9 [Camponotus
floridanus]
Length = 422
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKK---PCFVCGSLEHGVRQCS-------KAQDCFICKK 230
Q C+NC + GH +C + + CF CGS EH +C + CFIC++
Sbjct: 282 QVCFNCRKSGHNLSDCPELGRDEACTGICFKCGSTEHTHFECKVNKNSTYRYAKCFICRE 341
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
GH A +CPD K + + C CG H
Sbjct: 342 QGHIAVECPDNPKGIYPHGGCCKICGAVTH 371
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 221 KAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCY 280
K Q CF C+K GH DCP+ + +C KCG + H F C+ + + + +C+
Sbjct: 280 KKQVCFNCRKSGHNLSDCPELGRDEACTG-ICFKCGSTEHTHFECKVNKN-STYRYAKCF 337
Query: 281 ICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
ICR GH+ C N P C CG + H
Sbjct: 338 ICREQGHIAVECPDNPKGIYPHGGCCKICGAVTH 371
>gi|118426894|gb|ABK91198.1| gag protein [Human immunodeficiency virus 1]
Length = 168
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|118426840|gb|ABK91171.1| gag protein [Human immunodeficiency virus 1]
Length = 169
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|254667000|gb|ACT76428.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K + +GP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGIFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C G H A A+ + + + ++ G+ + K CF C K GH A++C
Sbjct: 350 CQGVGGPSHKARVLAEAMSQAQQTNIM--MQKGIFKGPKRIKCFNCGKEGHLARNCRAPR 407
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 408 KKG------CWKCGKEGHQMKDC 424
>gi|118426970|gb|ABK91236.1| gag protein [Human immunodeficiency virus 1]
Length = 155
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 2 EAMSQVQNTNIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 51
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 52 GKEGHQMKDCTERQANFLGK 71
>gi|409684266|gb|AFV34188.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K + +GP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGIFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C G H A A+ + + + ++ G+ + K CF C K GH A++C
Sbjct: 350 CQGVGGPSHKARVLAEAMSQAQHANIM--MQKGIFKGPKRIKCFNCGKEGHLARNCRAPR 407
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 408 KKG------CWKCGKEGHQMKDC 424
>gi|113706814|gb|ABI36504.1| gag protein [Human immunodeficiency virus 1]
Length = 507
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICK 229
C+NCG+EGH+A NCR+ RKK C+ CG EH ++ CS+ Q F+ K
Sbjct: 397 CFNCGKEGHIAKNCRAP--RKKGCWKCGKEEHQMKDCSERQANFLGK 441
>gi|338224552|gb|AEI88159.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K + +GP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGIFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 212 LEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
++ G+ + K CF C K GH A++C K G C KCG GH M C
Sbjct: 377 MQKGIFKGPKRIKCFNCGKEGHLARNCRAPRKKG------CWKCGKEGHQMKDC 424
>gi|326417088|gb|ADZ73387.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E +T V+ ++ ++ R +GP+ C+NCG EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMTHVQQANVMMQRGNFKGPKRIK--------CFNCGREGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|254667059|gb|ACT76462.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K + +GP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGIFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C G H A A+ + + + ++ G+ + K CF C K GH A++C
Sbjct: 350 CQGVGGPSHKARVLAEAMSQAQQTNIM--MQKGIFKGPKRIKCFNCGKEGHLARNCRAPR 407
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 408 KKG------CWKCGKEGHQMKDC 424
>gi|118426836|gb|ABK91169.1| gag protein [Human immunodeficiency virus 1]
Length = 151
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSTFRGPKRIK--------CFNCGREGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 69 GKEGHQMKDCTERQANFL 86
>gi|331029872|gb|AEC50064.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K + +GP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGIFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C G H A A+ + + + ++ G+ + K CF C K GH A++C
Sbjct: 350 CQGVGGPSHKARVLAEAMSQTQHANIM--MQKGIFKGPKRIKCFNCGKEGHLARNCRAPR 407
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 408 KKG------CWKCGKEGHQMKDC 424
>gi|331029870|gb|AEC50063.1| gag protein [Human immunodeficiency virus 1]
gi|331029874|gb|AEC50065.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K + +GP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGIFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C G H A A+ + + + ++ G+ + K CF C K GH A++C
Sbjct: 350 CQGVGGPSHKARVLAEAMSQTQHANIM--MQKGIFKGPKRIKCFNCGKEGHLARNCRAPR 407
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 408 KKG------CWKCGKEGHQMKDC 424
>gi|255739511|gb|ACU31693.1| gag protein [Human immunodeficiency virus 1]
Length = 491
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 11/71 (15%)
Query: 160 NIVLRKL-LRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K RGPR C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 371 NIMMQKSNFRGPRRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 420
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 421 CTERQANFLGK 431
>gi|197690502|emb|CAP69991.1| gag polyprotein [Human immunodeficiency virus 1]
Length = 498
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQPANIMMQRGNFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C G H A A+ + +P + ++ G + K CF C K GH A++C
Sbjct: 350 CQGVGGPSHKARVLAEAMSQVQPANIM--MQRGNFKGPKRIKCFNCGKEGHLARNCRAPR 407
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 408 KKG------CWKCGKEGHQMKDC 424
>gi|409684256|gb|AFV34179.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + + +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQQANIMMQKGIFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 415 GKEGHQMKDCTERQANFL 432
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
C G GH A A+ + + + ++ G+ + K CF C K GH A++C
Sbjct: 349 ACQGVGGPGHKAKVLAEAMSQVQQANIM--MQKGIFKGPKRIKCFNCGKEGHLARNCRAP 406
Query: 242 HKSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 407 RKKG------CWKCGKEGHQMKDC 424
>gi|118426968|gb|ABK91235.1| gag protein [Human immunodeficiency virus 1]
Length = 120
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 2 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 51
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 52 GKEGHQMKDCTERQANFLGK 71
>gi|112351428|gb|ABI15222.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 363 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 412
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 413 GKEGHQMKDCTERQANFLGK 432
>gi|429249180|gb|AFZ77634.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K + +GP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGIFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 212 LEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
++ G+ + K CF C K GH A++C K G C KCG GH M C
Sbjct: 377 MQKGIFKGPKRIKCFNCGKEGHLARNCRAPRKKG------CWKCGKEGHQMKDC 424
>gi|355679967|gb|AER96442.1| CCHC-type zinc finger, nucleic acid binding protein [Mustela
putorius furo]
Length = 162
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 62/146 (42%), Gaps = 43/146 (29%)
Query: 177 DRGWQ--------TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFIC 228
DRG+Q CY CGE GH+A +C L+ V + C+ C
Sbjct: 40 DRGFQFVSSSLPDICYRCGESGHLAKDC--------------DLQEDV------EACYNC 79
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
+GGH AKDC + + + Q C CG GH C D E +CY C FGH+
Sbjct: 80 GRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSCGEFGHI 130
Query: 289 CCVNISDAVPGEVSCFRCGQLGHTGL 314
D +V C+ CG+ GH +
Sbjct: 131 ----QKDCT--KVKCYGCGETGHVAI 150
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 181 QTCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKD 237
+ CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KD
Sbjct: 74 EACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKD 133
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCY 280
C C CG++GH +C + EV CY
Sbjct: 134 C---------TKVKCYGCGETGHVAINCSKT------SEVNCY 161
>gi|67478497|ref|XP_654640.1| zinc finger protein containing CCHC type domain [Entamoeba
histolytica HM-1:IMSS]
gi|56471707|gb|EAL49254.1| zinc finger protein containing CCHC type domain [Entamoeba
histolytica HM-1:IMSS]
gi|449708078|gb|EMD47605.1| zinc finger protein containing CCHC type domain containing protein
[Entamoeba histolytica KU27]
Length = 164
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKP-CFVCGSLEHGVRQCSKAQD-------CFICKKGG 232
+ C+ C + GH NC K + C+ CGS +H +R C + + CF+C + G
Sbjct: 14 KICFYCRQPGHCLKNCPKKAKGEDSICYNCGSHDHILRDCPEPRTGKLAFSTCFVCHQMG 73
Query: 233 HRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
H ++DCP+ K + C CGD H C N
Sbjct: 74 HISRDCPNNPKGIYPQGGGCRYCGDVNHFAKDCPN 108
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
CF C++ GH K+CP K K +C CG H + C + L C++C
Sbjct: 16 CFYCRQPGHCLKNCPKKAKG---EDSICYNCGSHDHILRDCPEPRT-GKLAFSTCFVCHQ 71
Query: 285 FGHL---CCVNISDAVPGEVSCFRCGQLGH 311
GH+ C N P C CG + H
Sbjct: 72 MGHISRDCPNNPKGIYPQGGGCRYCGDVNH 101
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 11/73 (15%)
Query: 182 TCYNCGEEGHMAVNC---RSAVKRKKPCFVCGSLEHGVRQCS--------KAQDCFICKK 230
CYNCG H+ +C R+ CFVC + H R C + C C
Sbjct: 39 ICYNCGSHDHILRDCPEPRTGKLAFSTCFVCHQMGHISRDCPNNPKGIYPQGGGCRYCGD 98
Query: 231 GGHRAKDCPDKHK 243
H AKDCP+K K
Sbjct: 99 VNHFAKDCPNKRK 111
>gi|429249188|gb|AFZ77638.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K + +GP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGIFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 212 LEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
++ G+ + K CF C K GH A++C K G C KCG GH M C
Sbjct: 377 MQKGIFKGPKRIKCFNCGKEGHLARNCRAPRKKG------CWKCGKEGHQMKDC 424
>gi|401843026|gb|EJT44984.1| GIS2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 153
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 58/130 (44%), Gaps = 10/130 (7%)
Query: 183 CYNCGEEGHMAVNCRSA-VKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
CYNC + GH+ +C K C+ CG H +C+ Q CF C + GH +K+CP+
Sbjct: 25 CYNCNKPGHVQTDCTMPRTVEFKQCYNCGETGHVRSECA-VQRCFNCNQTGHISKECPEP 83
Query: 242 HKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEV 301
K+ + C KCG H C D ++CY C GH+ S +
Sbjct: 84 KKATRFSKVSCYKCGGPNHMAKDCMKE---DGASGLKCYTCGQAGHM-----SRDCQNDR 135
Query: 302 SCFRCGQLGH 311
C+ C + GH
Sbjct: 136 LCYNCNETGH 145
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 64/158 (40%), Gaps = 38/158 (24%)
Query: 203 KKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDM 262
+K C+VCG + H C + C+ C K GH DC F+ C CG++GH
Sbjct: 3 QKACYVCGKIGHLAEDCDSERLCYNCNKPGHVQTDCTMPRTVEFKQ---CYNCGETGHVR 59
Query: 263 FSCRNSYSLDDLKEVQ-CYICRCFGHLCCVNISDAVP--------GEVSCFRCGQLGHTG 313
C VQ C+ C GH IS P +VSC++CG H
Sbjct: 60 SEC----------AVQRCFNCNQTGH-----ISKECPEPKKATRFSKVSCYKCGGPNHMA 104
Query: 314 LHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
+ C + G AS CY CG GH +R+C
Sbjct: 105 -------KDCMKEDG----ASGLKCYTCGQAGHMSRDC 131
>gi|242824530|ref|XP_002488277.1| zinc knuckle nucleic acid binding protein, putative [Talaromyces
stipitatus ATCC 10500]
gi|218713198|gb|EED12623.1| zinc knuckle nucleic acid binding protein, putative [Talaromyces
stipitatus ATCC 10500]
Length = 265
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 73/199 (36%), Gaps = 42/199 (21%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRA 235
+ CY CG GH A C SA ++ C+ C H C ++ + C+ C+ GH
Sbjct: 6 RACYKCGNIGHYAEVCSSA---ERLCYNCTYRCHESNACPRPRTTETKQCYHCQGLGHVQ 62
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSC----------------RNSYSLDDL----- 274
DCP +G N C CG GH +C R ++
Sbjct: 63 ADCPTLRLNGGANGGRCYGCGQPGHLARNCPTPNIQTGAGRGSGAPRGNFGGSLRGGFGG 122
Query: 275 --KEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVE 332
+ CY C H D + C+ CG+LGH + C G +
Sbjct: 123 YPRAATCYKCGGPNHF----ARDCQAQAMKCYACGKLGHI-------SRDCTAPNGGPLS 171
Query: 333 ASPSSCYNCGAEGHFAREC 351
++ CY C GH +R+C
Sbjct: 172 SAGKVCYKCSQAGHISRDC 190
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 12/67 (17%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC---------SKAQDCFICKKGG 232
TCY CG H A +C++ + C+ CG L H R C S + C+ C + G
Sbjct: 128 TCYKCGGPNHFARDCQAQAMK---CYACGKLGHISRDCTAPNGGPLSSAGKVCYKCSQAG 184
Query: 233 HRAKDCP 239
H ++DCP
Sbjct: 185 HISRDCP 191
>gi|407040390|gb|EKE40104.1| zinc finger protein containing CCHC type domain containing protein
[Entamoeba nuttalli P19]
Length = 164
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 181 QTCYNCGEEGHMAVNC-RSAVKRKKPCFVCGSLEHGVRQCSKAQD-------CFICKKGG 232
+ C+ C + GH NC + A C+ CGS +H +R C + + CF+C + G
Sbjct: 14 KICFYCRQPGHCLKNCPKKAKGEDSICYNCGSHDHILRDCPEPRTGKLAFSTCFVCHQMG 73
Query: 233 HRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
H ++DCP+ K + C CGD H C N
Sbjct: 74 HISRDCPNNPKGIYPQGGGCRYCGDVNHFAKDCPN 108
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
CF C++ GH K+CP K K +C CG H + C + L C++C
Sbjct: 16 CFYCRQPGHCLKNCPKKAKG---EDSICYNCGSHDHILRDCPEPRT-GKLAFSTCFVCHQ 71
Query: 285 FGHL---CCVNISDAVPGEVSCFRCGQLGH 311
GH+ C N P C CG + H
Sbjct: 72 MGHISRDCPNNPKGIYPQGGGCRYCGDVNH 101
Score = 38.5 bits (88), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 11/73 (15%)
Query: 182 TCYNCGEEGHMAVNC---RSAVKRKKPCFVCGSLEHGVRQCS--------KAQDCFICKK 230
CYNCG H+ +C R+ CFVC + H R C + C C
Sbjct: 39 ICYNCGSHDHILRDCPEPRTGKLAFSTCFVCHQMGHISRDCPNNPKGIYPQGGGCRYCGD 98
Query: 231 GGHRAKDCPDKHK 243
H AKDCP+K K
Sbjct: 99 VNHFAKDCPNKRK 111
>gi|112351468|gb|ABI15258.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 363 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 412
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 413 GKEGHQMKDCTERQANFLGK 432
>gi|429249246|gb|AFZ77667.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K + +GP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NILMQKGIFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C G H A A+ + + + ++ G+ + K CF C K GH A++C
Sbjct: 350 CQGVGGPSHKARVLAEAMSQAQQTNIL--MQKGIFKGPKRIKCFNCGKEGHLARNCRAPR 407
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 408 KKG------CWKCGKEGHQMKDC 424
>gi|88853350|emb|CAJ01233.1| gag protein [Human immunodeficiency virus 1]
Length = 493
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K RGPR C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 372 NIMMQKGNFRGPRKIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 421
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 422 CTERQANFLGK 432
>gi|373842344|gb|AEY77161.1| gag protein [Human immunodeficiency virus]
Length = 498
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K + +GP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGIFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 212 LEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
++ G+ + K CF C K GH A++C K G C KCG GH M C
Sbjct: 377 MQKGIFKGPKRIKCFNCGKEGHLARNCRAPRKKG------CWKCGKEGHQMKDC 424
>gi|148469906|gb|ABQ65894.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ + ++ R RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 363 EAMSQVQNASIMMQRSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 412
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 413 GKEGHQMKDCTERQANFL 430
>gi|331029866|gb|AEC50061.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K + +GP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGIFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 212 LEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
++ G+ + K CF C K GH A++C K G C KCG GH M C
Sbjct: 377 MQKGIFKGPKRIKCFNCGKEGHLARNCRAPRKKG------CWKCGKEGHQMKDC 424
>gi|354492644|ref|XP_003508457.1| PREDICTED: cellular nucleic acid-binding protein-like [Cricetulus
griseus]
Length = 172
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 72/190 (37%), Gaps = 48/190 (25%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP------------------CFVCGSLEHGVRQC--SKA 222
C+ CG GH A C + R C+ CG +H + C +
Sbjct: 6 CFKCGRSGHWARECPTGGGRGHGMRSRGRGFQFVFSSLPDICYNCGESDHLAKDCDLQEG 65
Query: 223 QDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYIC 282
C+ C +GG AKDC + + + C G GH C D E +CY C
Sbjct: 66 DACYNCGRGGLIAKDCKEPKRE--REQCCCYNFGKPGHLARDC------DHADEQKCYSC 117
Query: 283 RCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCG 342
FGH+ D V C+RCG+ GH + + + S +CY CG
Sbjct: 118 SEFGHI----QKDCT--SVKCYRCGEPGHVATNCS--------------KTSEVNCYRCG 157
Query: 343 AEGHFARECV 352
GH A+EC
Sbjct: 158 ESGHLAQECT 167
>gi|33088446|gb|AAP93265.1| gag protein [Human immunodeficiency virus 1]
Length = 157
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 24 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 73
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 74 GKEGHQMKDCTERQANFLGK 93
>gi|373842384|gb|AEY77181.1| gag protein [Human immunodeficiency virus]
Length = 498
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K + +GP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGIFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
C G GH A A+ + + + ++ G+ + K CF C K GH A++C
Sbjct: 349 ACQGVGGPGHKARVLAEAMSQAQQANIM--MQKGIFKGPKRIKCFNCGKEGHLARNCRAP 406
Query: 242 HKSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 407 RKKG------CWKCGKEGHQMKDC 424
>gi|371559454|gb|AEX36638.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|299115494|emb|CBN75658.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 351
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 38/99 (38%), Gaps = 9/99 (9%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD---------CFICKKGGH 233
C C GH+ NC A CF CGS +H +R C + CFICK GH
Sbjct: 99 CLGCRAWGHIVANCPEAKAATGICFNCGSAKHALRVCPAPKQKDGSLPYATCFICKAKGH 158
Query: 234 RAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
+ C + C CG H + C S +D
Sbjct: 159 ISAHCKQNANGVYPKGGFCKWCGSKHHLSWDCPESTKVD 197
>gi|118426828|gb|ABK91165.1| gag protein [Human immunodeficiency virus 1]
Length = 150
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 10/82 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICKKG 231
G H ++ C++ Q F+ K G
Sbjct: 69 GKEGHQMKDCTERQANFLGKFG 90
>gi|408398062|gb|EKJ77198.1| hypothetical protein FPSE_02648 [Fusarium pseudograminearum CS3096]
Length = 614
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 83/208 (39%), Gaps = 39/208 (18%)
Query: 105 VKSSDKKRIRVRKKKKKEADKIEIEDQSVIVRKEEQKVETADNGDEGVTTVEISDNIVLR 164
+ ++++K V++ A K+ QS+ + + ++V T ++
Sbjct: 243 LSTAERKEEDVKEANGDSASKVLNHHQSLPIIETHRRVPTGNDA---------------- 286
Query: 165 KLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD 224
L + RYF Q C CG H+A +C + V C CGSL+H + C + +
Sbjct: 287 -LEQQRRYFPSASDPAQMCLLCGLNTHLAPSCPTLV-----C-SCGSLDHSIVCCPEKER 339
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
C C++ GH+ C +K + C+ C S D L+E + R
Sbjct: 340 CRKCRQVGHQTSGCTEKLALTKEEGLACVFCN-------------STDHLEEQCTEVWRS 386
Query: 285 F-GHLCCVNISDAVPGEVSCFRCGQLGH 311
F H+ V +P SC CG GH
Sbjct: 387 FHPHVSVVRKVAFIPA--SCSMCGSDGH 412
>gi|403256918|ref|XP_003921090.1| PREDICTED: zinc finger CCHC domain-containing protein 9-like
[Saimiri boliviensis boliviensis]
Length = 196
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C +A++ + C+ CGS EH + +C D CF+
Sbjct: 54 VCFHCRKPGHGIADCPAALENQDTGTGICYRCGSTEHEITKCKATVDPALGEFPFAKCFV 113
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
C + GH ++ CPD K + + C CG H C S + D + V
Sbjct: 114 CGEMGHPSRACPDNPKGLYADGGGCKLCGSVEHLKKDCPESQNSDRMVTV 163
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C+K GH DCP ++ +C +CG + H++ C+ + +L
Sbjct: 45 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDTGTGICYRCGSTEHEITKCKATVDPALG 104
Query: 273 DLKEVQCYICRCFGH 287
+ +C++C GH
Sbjct: 105 EFPFAKCFVCGEMGH 119
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 13/119 (10%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVP 298
K ++ +NA VC C GH + C + D CY C H C D
Sbjct: 44 KRQAAKKNAMVCFHCRKPGHGIADCPAALENQDTGTGICYRCGSTEHEITKCKATVDPAL 103
Query: 299 GEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
GE CF CG++GH +AC + + A C CG+ H ++C S
Sbjct: 104 GEFPFAKCFVCGEMGHPS-------RACP-DNPKGLYADGGGCKLCGSVEHLKKDCPES 154
>gi|429249222|gb|AFZ77655.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K + +GP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 375 NIMMQKGIFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 424
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 425 CTERQANFLGK 435
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
C G GH A A+ + + + ++ G+ + K CF C K GH A++C
Sbjct: 350 ACQGVGGPGHKARVLAEAMSQAQHANIM--MQKGIFKGPKRIKCFNCGKEGHLARNCRAP 407
Query: 242 HKSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 408 RKKG------CWKCGKEGHQMKDC 425
>gi|330912764|ref|XP_003296063.1| hypothetical protein PTT_04676 [Pyrenophora teres f. teres 0-1]
gi|311332086|gb|EFQ95837.1| hypothetical protein PTT_04676 [Pyrenophora teres f. teres 0-1]
Length = 512
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 71/178 (39%), Gaps = 40/178 (22%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAK 236
DRG C NC E GH+ +C+ ++ C C++ GHRA+
Sbjct: 303 DRGVPLCNNCNELGHVRKHCKQEQPERE-------------NMQPETQCVYCQEVGHRAR 349
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNIS 294
DCP + + F C C GH+ C S + V+C C GH C N++
Sbjct: 350 DCPKERTNPF----ACKNCKQEGHNSKECPEPRSAEG---VECRKCNETGHFSKDCPNVA 402
Query: 295 DAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRG-ETVEASPSSCYNCGAEGHFAREC 351
+C CG H + C + R +TV +C NC GHF+++C
Sbjct: 403 -----ARTCRNCGSADHMA-------KECDQPRNPDTV-----TCRNCEKMGHFSKDC 443
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
C ICK+ GH A+DCPDK + G C CG GH+ C N ++ E C +C
Sbjct: 107 CRICKQTGHFARDCPDKPEGGGGLTGECYNCGQVGHNKADCPNE-RVERPFEGTCKLCDQ 165
Query: 285 FGH 287
GH
Sbjct: 166 EGH 168
>gi|259127927|gb|ACV94736.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQHTNIMMQRGNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 415 GKEGHQMKDCTERQANFL 432
Score = 38.5 bits (88), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C G GH A A+ + + + ++ G + K CF C K GH A++C
Sbjct: 350 CQGVGGPGHKARVLAEAMSQVQHTNIM--MQRGNFRGPKRIKCFNCGKEGHLARNCRAPR 407
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 408 KKG------CWKCGKEGHQMKDC 424
>gi|118426964|gb|ABK91233.1| gag protein [Human immunodeficiency virus 1]
Length = 152
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNTNIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|334884420|gb|AEH21321.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 502
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQQANVMMQRGNFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|409684227|gb|AFV34153.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K + +GP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGIFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKG 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C G H A A+ + + + ++ G+ + K CF C K GH A++C
Sbjct: 350 CQGVGGPSHKARVLAEAMSQAQQTNIM--MQKGIFKGPKRIKCFNCGKEGHLARNCRAPR 407
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 408 KKG------CWKCGKEGHQMKGC 424
>gi|373842354|gb|AEY77166.1| gag protein [Human immunodeficiency virus]
Length = 495
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K + +GP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGIFKGPKRIK--------CFNCGKEGHIAKNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 212 LEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
++ G+ + K CF C K GH AK+C K G C KCG GH M C
Sbjct: 377 MQKGIFKGPKRIKCFNCGKEGHIAKNCRAPRKKG------CWKCGKEGHQMKDC 424
>gi|242031243|gb|ACS77619.1| gag protein [Human immunodeficiency virus 1]
Length = 459
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V + ++ R +GPR C+NCG+EGHMA NCR+ RKK C+ C
Sbjct: 345 EAMSQVNNATVLMQRNNFKGPRRIV-------KCFNCGKEGHMAKNCRAP--RKKGCWKC 395
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 396 GQEGHQMKDCTERQANFLGK 415
>gi|171677448|ref|XP_001903675.1| hypothetical protein [Podospora anserina S mat+]
gi|170936792|emb|CAP61450.1| unnamed protein product [Podospora anserina S mat+]
Length = 229
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 51/124 (41%), Gaps = 29/124 (23%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP-------------------------CFVCGSLEHGVR 217
CY CG+ H+A NC SA P C+ CG H R
Sbjct: 88 CYTCGQPNHIARNCPSAQGGMAPGPMPGRGGFGPARGGFHPGGARHATCYKCGGPNHYAR 147
Query: 218 QC-SKAQDCFICKKGGHRAKDCPDKHKSGFQNA-QVCLKCGDSGHDMFSC--RNSYSLDD 273
C ++A C+ C K GH ++DC + A + C +CG++GH C RN + D
Sbjct: 148 DCQAQAMKCYACGKLGHISRDCTAPNGGPLNTAGKTCYQCGEAGHISRDCPKRNGANGAD 207
Query: 274 LKEV 277
EV
Sbjct: 208 APEV 211
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 59/175 (33%), Gaps = 42/175 (24%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP------CFVCGSLEHGVRQCSKAQDCFICKKGGHRAK 236
CY+C GH+ C + P C+ CG H R C AQ GG
Sbjct: 59 CYHCQGVGHVQAECPTMRLNGGPGGPHNRCYTCGQPNHIARNCPSAQ-------GGMAPG 111
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDA 296
P + GF A R + + CY C H D
Sbjct: 112 PMPGR--GGFGPA----------------RGGFHPGGARHATCYKCGGPNHY----ARDC 149
Query: 297 VPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
+ C+ CG+LGH + C G + + +CY CG GH +R+C
Sbjct: 150 QAQAMKCYACGKLGHI-------SRDCTAPNGGPLNTAGKTCYQCGEAGHISRDC 197
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 12/81 (14%)
Query: 173 FDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC---------SKAQ 223
F P TCY CG H A +C++ + C+ CG L H R C + +
Sbjct: 126 FHPGGARHATCYKCGGPNHYARDCQAQAMK---CYACGKLGHISRDCTAPNGGPLNTAGK 182
Query: 224 DCFICKKGGHRAKDCPDKHKS 244
C+ C + GH ++DCP ++ +
Sbjct: 183 TCYQCGEAGHISRDCPKRNGA 203
>gi|118369873|ref|XP_001018139.1| Glutathione peroxidase family protein [Tetrahymena thermophila]
gi|89299906|gb|EAR97894.1| Glutathione peroxidase family protein [Tetrahymena thermophila SB210]
Length = 2190
Score = 52.4 bits (124), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 48/119 (40%), Gaps = 13/119 (10%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
TC+ C GH A C + + + C C +H C+ CF C GHR KDC +
Sbjct: 2055 TCFKCHRNGHTAQLCTNQSEERSKCVFCLG-DHSKDYCTNYV-CFKCYLVGHRIKDCAFE 2112
Query: 242 HKSGFQNAQVCLKCGDSGHDMFSC--------RNSYSLDDLKEVQCYICRCFGHLCCVN 292
++C K GH + C + SY + E C CR GH+ C N
Sbjct: 2113 QSMDQSRCRICRK---KGHTLKQCGSLNLDIVQKSYDFYSMNETICLNCREPGHINCFN 2168
>gi|118426818|gb|ABK91160.1| gag protein [Human immunodeficiency virus 1]
Length = 158
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLAKNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCNERQANFLGK 88
>gi|332224858|ref|XP_003261585.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 3
[Nomascus leucogenys]
Length = 327
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 14/111 (12%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CF 226
C++C + GH +C +A++ + C+ CGS EH + +C D CF
Sbjct: 184 MVCFHCRKAGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCF 243
Query: 227 ICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
+C + GH ++ CPD K + + C CG H C S + + + V
Sbjct: 244 VCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPESQNSERMVTV 294
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C+K GH DCP ++ +C +CG + H++ C+ +L
Sbjct: 176 RQAAKKNAMVCFHCRKAGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 235
Query: 273 DLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+ +C++C GHL C N C CG + H
Sbjct: 236 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEH 277
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVP 298
K ++ +NA VC C +GH + C + D+ CY C H C D
Sbjct: 175 KRQAAKKNAMVCFHCRKAGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPAL 234
Query: 299 GEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
GE CF CG++GH SC + + A C CG+ H ++C S
Sbjct: 235 GEFPFAKCFVCGEMGHLS---RSC-----PDNPKGLYADGGGCKLCGSVEHLKKDCPES 285
>gi|118426942|gb|ABK91222.1| gag protein [Human immunodeficiency virus 1]
Length = 152
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|47228551|emb|CAG05371.1| unnamed protein product [Tetraodon nigroviridis]
Length = 274
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 14/97 (14%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFIC 228
C+NC + GH +C A + ++ C+ CGS EH +++C D CFIC
Sbjct: 135 CFNCRKPGHGLADCPEADRDEEMGRGICYRCGSTEHEIQKCRAKVDPALGEFPYAKCFIC 194
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
+ GH ++ CPD K + C CG H C
Sbjct: 195 GETGHLSRTCPDNPKGLYAQGGCCRVCGSVEHFQKDC 231
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLDDLKEVQCYIC 282
CF C+K GH DCP+ + +C +CG + H++ CR +L + +C+IC
Sbjct: 135 CFNCRKPGHGLADCPEADRDEEMGRGICYRCGSTEHEIQKCRAKVDPALGEFPYAKCFIC 194
Query: 283 RCFGHL--CCVNISDAVPGEVSCFR-CGQLGH 311
GHL C + + + C R CG + H
Sbjct: 195 GETGHLSRTCPDNPKGLYAQGGCCRVCGSVEH 226
>gi|371559504|gb|AEX36683.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|429249256|gb|AFZ77672.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K +GP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGFFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
>gi|402871997|ref|XP_003899930.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 3
[Papio anubis]
Length = 327
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 14/111 (12%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CF 226
C++C + GH +C +A++ + C+ CGS EH + +C D CF
Sbjct: 184 MVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCF 243
Query: 227 ICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
+C + GH ++ CPD K + + C CG H C S + + + V
Sbjct: 244 VCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPESQNSERMVTV 294
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C+K GH DCP ++ +C +CG + H++ C+ +L
Sbjct: 176 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 235
Query: 273 DLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+ +C++C GHL C N C CG + H
Sbjct: 236 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEH 277
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 13/119 (10%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVP 298
K ++ +NA VC C GH + C + D+ CY C H C D
Sbjct: 175 KRQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPAL 234
Query: 299 GEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
GE CF CG++GH SC + + A C CG+ H ++C S
Sbjct: 235 GEFPFAKCFVCGEMGHLS---RSC-----PDNPKGLYADGGGCKLCGSVEHLKKDCPES 285
>gi|124389764|gb|ABN11064.1| gag protein [Human immunodeficiency virus 1]
Length = 494
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 9/63 (14%)
Query: 167 LRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCF 226
+GPR F C+NCG+EGH+A NCR+ RKK C+ CG H +++C++ Q F
Sbjct: 384 FKGPRKFI-------KCFNCGKEGHIAKNCRAP--RKKGCWKCGKEGHQMKECTERQANF 434
Query: 227 ICK 229
+ K
Sbjct: 435 LGK 437
>gi|118426842|gb|ABK91172.1| gag protein [Human immunodeficiency virus 1]
Length = 163
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 14 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 63
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 64 GKEGHQMKDCTERQANFLGK 83
>gi|118426948|gb|ABK91225.1| gag protein [Human immunodeficiency virus 1]
Length = 133
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 2 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 51
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 52 GKEGHQMKDCTERQANFLGK 71
>gi|118426806|gb|ABK91154.1| gag protein [Human immunodeficiency virus 1]
Length = 150
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 17 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 66
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 67 GKEGHQMKDCTERQANFLGK 86
>gi|55979918|gb|AAV69373.1| gag protein [Human immunodeficiency virus 1]
gi|118426800|gb|ABK91151.1| gag protein [Human immunodeficiency virus 1]
Length = 152
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLAKNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|345561223|gb|EGX44319.1| hypothetical protein AOL_s00193g47 [Arthrobotrys oligospora ATCC
24927]
Length = 180
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 21/99 (21%)
Query: 183 CYNCGEEGHMAVNC-------------------RSAVKRKKPCFVCGSLEHGVRQC-SKA 222
CY+CG+ GH+A NC ++ R C+ CG H R C ++A
Sbjct: 39 CYSCGQPGHLARNCPGNQRFQGGGFNGRNNMRGYASAPRPATCYKCGGPNHYARDCQAQA 98
Query: 223 QDCFICKKGGHRAKDCPDKHKSGFQNA-QVCLKCGDSGH 260
C+ C K GH ++DC + A + C +CG++GH
Sbjct: 99 MKCYACGKLGHISRDCTAPNGGPLNTAGKTCYRCGEAGH 137
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 62/165 (37%), Gaps = 28/165 (16%)
Query: 212 LEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC------ 265
+ +RQ +K C+ C+ GH DCP +G + C CG GH +C
Sbjct: 1 MAPAIRQTTK--QCYHCQGLGHVQADCPTLRINGGATSGRCYSCGQPGHLARNCPGNQRF 58
Query: 266 -------RNSY--SLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHW 316
RN+ + CY C H D + C+ CG+LGH
Sbjct: 59 QGGGFNGRNNMRGYASAPRPATCYKCGGPNHY----ARDCQAQAMKCYACGKLGHI---- 110
Query: 317 NSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVRKRN 361
+ C G + + +CY CG GH +R+C ++ N
Sbjct: 111 ---SRDCTAPNGGPLNTAGKTCYRCGEAGHISRDCPQNATTSNDN 152
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 12/68 (17%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK---------AQDCFICKKGG 232
TCY CG H A +C++ + C+ CG L H R C+ + C+ C + G
Sbjct: 80 TCYKCGGPNHYARDCQAQAMK---CYACGKLGHISRDCTAPNGGPLNTAGKTCYRCGEAG 136
Query: 233 HRAKDCPD 240
H ++DCP
Sbjct: 137 HISRDCPQ 144
>gi|254667095|gb|ACT76486.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K + +GP+ C+NCG EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGIFKGPKRIK--------CFNCGREGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C G H A A+ + + + ++ G+ + K CF C + GH A++C
Sbjct: 350 CQGVGGPSHKARVLAEAMSQAQQTNIM--MQKGIFKGPKRIKCFNCGREGHLARNCRAPR 407
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 408 KKG------CWKCGKEGHQMKDC 424
>gi|74052533|gb|AAZ95218.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|332021649|gb|EGI62008.1| Zinc finger CCHC domain-containing protein 9 [Acromyrmex
echinatior]
Length = 421
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKK---PCFVCGSLEHGVRQCSKAQD-------CFICKKG 231
C+NC + GH +C + + CF CGS EH +C +D CFIC++
Sbjct: 283 VCFNCRKSGHNLSDCPELDRSEACTGICFKCGSTEHTHFECKVNKDSIYRYAKCFICREQ 342
Query: 232 GHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
GH A CPD K + + C CG H
Sbjct: 343 GHIAMQCPDNPKGVYPHGGCCKICGAVTH 371
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCR-NSYSLDDLKEVQCYICR 283
CF C+K GH DCP+ +S +C KCG + H F C+ N S+ + +C+ICR
Sbjct: 284 CFNCRKSGHNLSDCPELDRSEACTG-ICFKCGSTEHTHFECKVNKDSI--YRYAKCFICR 340
Query: 284 CFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
GH+ C N P C CG + H
Sbjct: 341 EQGHIAMQCPDNPKGVYPHGGCCKICGAVTH 371
>gi|118426850|gb|ABK91176.1| gag protein [Human immunodeficiency virus 1]
Length = 152
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|429249298|gb|AFZ77693.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K + +GP+ C+NCG EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGIFKGPKRIK--------CFNCGREGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
>gi|201067640|gb|ACH92926.1| vasa protein [Parhyale hawaiensis]
Length = 707
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 16/102 (15%)
Query: 183 CYNCGEEGHMAVNCRS--AVKRKKPCFVCGSLEHGVRQCSK------------AQDCFIC 228
C CGEEGH A C S + CF CG H R+C + + CF C
Sbjct: 56 CRKCGEEGHRAFECTSGGGGGGNRACFKCGEEGHMSRECPQGGGQSFGGGGGGNRGCFKC 115
Query: 229 KKGGHRAKDCPD--KHKSGFQNAQVCLKCGDSGHDMFSCRNS 268
+ GH ++DCP+ G + C KCG+ GH C +S
Sbjct: 116 GEEGHMSRDCPNSVNGGGGASGGKGCFKCGEEGHMSRDCPSS 157
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 13/98 (13%)
Query: 183 CYNCGEEGHMAVNCRSAVK------RKKPCFVCGSLEHGVRQCSKAQD-----CFICKKG 231
C+ CGEEGHM+ +C ++V K CF CG H R C + + CF C +
Sbjct: 112 CFKCGEEGHMSRDCPNSVNGGGGASGGKGCFKCGEEGHMSRDCPSSGNGGGKGCFKCGED 171
Query: 232 GHRAKDCPDKHKSGFQNA--QVCLKCGDSGHDMFSCRN 267
GH A+DCP G + C CG+ GH+ C N
Sbjct: 172 GHMARDCPQGGDGGGGGGGNRGCFNCGEQGHNKADCPN 209
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 18/77 (23%)
Query: 181 QTCYNCGEEGHMAVNC--------RSAVKRKKPCFVCGSLEHGVRQCSKAQD-------- 224
+ C+ CGEEGHM+ C + CF CG H R C + +
Sbjct: 79 RACFKCGEEGHMSRECPQGGGQSFGGGGGGNRGCFKCGEEGHMSRDCPNSVNGGGGASGG 138
Query: 225 --CFICKKGGHRAKDCP 239
CF C + GH ++DCP
Sbjct: 139 KGCFKCGEEGHMSRDCP 155
>gi|225056156|gb|ACN80883.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 10/81 (12%)
Query: 150 EGVTTVEISDNIVLRKL-LRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFV 208
E ++ V S ++++K RGP+ C+NCG+EGH+A NCR+ RKK C+
Sbjct: 364 EAMSQVTNSATVMMQKSNFRGPKRMV-------KCFNCGKEGHIAKNCRAP--RKKGCWK 414
Query: 209 CGSLEHGVRQCSKAQDCFICK 229
CG H +++C++ Q F+ K
Sbjct: 415 CGKEGHQMKECTERQANFLGK 435
>gi|118426804|gb|ABK91153.1| gag protein [Human immunodeficiency virus 1]
Length = 152
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|55979907|gb|AAV69368.1| gag protein [Human immunodeficiency virus 1]
Length = 143
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|259127946|gb|ACV94744.1| gag protein, partial [Human immunodeficiency virus 1]
gi|259127965|gb|ACV94753.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 495
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ + ++ R RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQQPNIMMQRGNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 415 GKEGHQMKDCTERQANFL 432
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 10/85 (11%)
Query: 182 TCYNCGEEGHMA-VNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
C G GH A V + + ++P + ++ G + K CF C K GH A++C
Sbjct: 349 ACQGVGGPGHKARVLAEAMSQVQQPNIM---MQRGNFRGPKRIKCFNCGKEGHLARNCRA 405
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 406 PRKKG------CWKCGKEGHQMKDC 424
>gi|366999588|ref|XP_003684530.1| hypothetical protein TPHA_0B04270 [Tetrapisispora phaffii CBS 4417]
gi|357522826|emb|CCE62096.1| hypothetical protein TPHA_0B04270 [Tetrapisispora phaffii CBS 4417]
Length = 165
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 78/194 (40%), Gaps = 54/194 (27%)
Query: 181 QTCYNCGEEGHMAVNCRS---------------------AVKRKKPCFVCGSLEHGVRQC 219
+ CY CG+ GH+A +C S +V+ K+ C+ CG H +C
Sbjct: 4 KACYVCGKLGHLAEDCDSDRLCYNCNQAGHLQSECTLPRSVEHKQ-CYNCGETGHVRSEC 62
Query: 220 SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQC 279
S Q CF C + GH +KDC + K F N FS RN+ +V C
Sbjct: 63 S-VQRCFNCNQTGHISKDCSEPRKQKFNNGM--------SAQRFS-RNN-------KVSC 105
Query: 280 YICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCY 339
Y C H+ D + + C+ CG +GH S G V A CY
Sbjct: 106 YKCGGPNHM----AKDCLQEDFKCYSCGGVGHLSKDCPS---------GSGVNA--KVCY 150
Query: 340 NCGAEGHFARECVS 353
NC GH +REC S
Sbjct: 151 NCNQTGHISRECPS 164
>gi|406867883|gb|EKD20920.1| zinc knuckle protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 198
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 68/182 (37%), Gaps = 57/182 (31%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK------------ 221
D P RG CYNCG EGHM+ C K K C+ CG H R C+
Sbjct: 25 DCPTRGPAKCYNCGGEGHMSRECPDGPKDKT-CYKCGQPGHISRDCTNPSSDGAGRGGFG 83
Query: 222 -----AQDCFICKKGGHRAKDCPD----------------------KHKSGFQNAQVCLK 254
+Q+C+ C K GH A++CP+ Q Q C
Sbjct: 84 GQGGGSQECYKCSKIGHIARNCPEAGGYGGGGYGGQSGYGGGQGGYGGGGRAQGGQTCYS 143
Query: 255 CGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVP----GEVSCFRCGQLG 310
CG GH S D + +CY C GHL S P E +C++C Q G
Sbjct: 144 CGGYGH--------MSRDCTQGQKCYNCGEVGHL-----SRDCPSENNNERTCYKCKQPG 190
Query: 311 HT 312
H
Sbjct: 191 HV 192
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 44/113 (38%), Gaps = 30/113 (26%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKK--------------------------PCFVCGSLEH 214
Q CY C + GH+A NC A C+ CG H
Sbjct: 90 QECYKCSKIGHIARNCPEAGGYGGGGYGGQSGYGGGQGGYGGGGRAQGGQTCYSCGGYGH 149
Query: 215 GVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
R C++ Q C+ C + GH ++DCP ++ N + C KC GH C N
Sbjct: 150 MSRDCTQGQKCYNCGEVGHLSRDCPSENN----NERTCYKCKQPGHVQAQCPN 198
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 65/171 (38%), Gaps = 44/171 (25%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC---SKAQDCFICKKG 231
PP RG CYNCG+ H A +C + K C+ CG H R+C K + C+ C +
Sbjct: 8 PPPRG---CYNCGDASHQARDCPTRGPAK--CYNCGGEGHMSRECPDGPKDKTCYKCGQP 62
Query: 232 GHRAKDCPDK---------HKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQ---- 278
GH ++DC + +Q C KC GH +C +
Sbjct: 63 GHISRDCTNPSSDGAGRGGFGGQGGGSQECYKCSKIGHIARNCPEAGGYGGGGYGGQSGY 122
Query: 279 ------------------CYICRCFGHLCCVNISDAVPGEVSCFRCGQLGH 311
CY C +GH+ D G+ C+ CG++GH
Sbjct: 123 GGGQGGYGGGGRAQGGQTCYSCGGYGHM----SRDCTQGQ-KCYNCGEVGH 168
>gi|242031259|gb|ACS77627.1| gag protein [Human immunodeficiency virus 1]
Length = 459
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V + ++ R +GPR C+NCG+EGHMA NCR+ RKK C+ C
Sbjct: 345 EAMSQVNNATVLMQRNNFKGPRRIV-------KCFNCGKEGHMARNCRAP--RKKGCWKC 395
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 396 GQEGHQMKDCTERQANFLGK 415
>gi|242247059|ref|NP_001156049.1| zinc finger protein-like [Acyrthosiphon pisum]
gi|239789225|dbj|BAH71250.1| ACYPI000340 [Acyrthosiphon pisum]
Length = 202
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 70/187 (37%), Gaps = 45/187 (24%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD---CFICKKGGHRAKDC 238
CY C GH+A +C K K C+ C + H R CS++ C+ C+K GH A++C
Sbjct: 54 NCYKCNRSGHIARDC----KDKDRCYRCDGVGHIARDCSQSASEPSCYNCRKTGHLAREC 109
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDA 296
PD+ + CY C GH C+ +
Sbjct: 110 PDERADRGSGGGM--------------GGGGMGGGGSSSTCYNCNKIGHFSRDCMESRNG 155
Query: 297 VPGEVS--CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
G S C C GH + E + SCYNCG +GH +REC
Sbjct: 156 GSGNYSALCRNCNGSGHMAR--------------DCPEGNKQSCYNCGEQGHLSREC--- 198
Query: 355 SKVRKRN 361
RKRN
Sbjct: 199 ---RKRN 202
>gi|118426852|gb|ABK91177.1| gag protein [Human immunodeficiency virus 1]
Length = 152
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNTNIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|118426874|gb|ABK91188.1| gag protein [Human immunodeficiency virus 1]
Length = 152
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|118426820|gb|ABK91161.1| gag protein [Human immunodeficiency virus 1]
Length = 152
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|22596554|gb|AAN03310.1|AF457088_1 gag protein [Human immunodeficiency virus 1]
Length = 489
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ +V R RG R C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 361 EAMSQVQKTNIMVQRGNFRGQRRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 410
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 411 GKEGHQMKDCTERQANFLGK 430
>gi|429249310|gb|AFZ77699.1| gag protein [Human immunodeficiency virus 1]
Length = 506
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K +GP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 378 NIMMQKGFFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 427
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 428 CTERQANFLGK 438
>gi|119361806|gb|ABL66834.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 363 EAMSNVQHTNIMMQRGNFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 412
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 413 GKEGHQMKDCTERQANFLGK 432
>gi|55979920|gb|AAV69374.1| gag protein [Human immunodeficiency virus 1]
Length = 144
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|147744220|gb|ABQ51045.1| gag protein [Human immunodeficiency virus 1]
Length = 180
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E +++V+ + ++ R +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 53 EAMSSVQQENVMMQRGNFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 102
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 103 GKEGHQMKDCTERQANFLGK 122
>gi|154305586|ref|XP_001553195.1| hypothetical protein BC1G_08562 [Botryotinia fuckeliana B05.10]
Length = 254
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 67/179 (37%), Gaps = 22/179 (12%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVC------GSLEHGVRQCSKAQDCFICKKGGHR 234
+ CY CG GH A C SA ++ C+ C EH C+ C GH
Sbjct: 60 RACYKCGNVGHYAEVCASA---ERLCYNCKQPGKPSEAEHNSSGAGTTGRCYNCGMPGHL 116
Query: 235 AKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNIS 294
A+ CP+ + +G Q L G + CY C H
Sbjct: 117 ARACPNPN-NGMQGPPRGLGAPRGGFGGGFAPRGGFAGGPRPATCYKCGGPNHF----AR 171
Query: 295 DAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVS 353
D + C+ CG+ GH+ + C G +A +CY CG EGH AR+C S
Sbjct: 172 DCQAQAMKCYACGRTGHS-------SRECTSPNGGVNKAG-KTCYTCGTEGHIARDCPS 222
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 45/123 (36%), Gaps = 31/123 (25%)
Query: 183 CYNCGEEGHMAVNCR------------------------------SAVKRKKPCFVCGSL 212
CYNCG GH+A C + R C+ CG
Sbjct: 107 CYNCGMPGHLARACPNPNNGMQGPPRGLGAPRGGFGGGFAPRGGFAGGPRPATCYKCGGP 166
Query: 213 EHGVRQC-SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSL 271
H R C ++A C+ C + GH +++C + + + C CG GH C +
Sbjct: 167 NHFARDCQAQAMKCYACGRTGHSSRECTSPNGGVNKAGKTCYTCGTEGHIARDCPSKGLN 226
Query: 272 DDL 274
D+L
Sbjct: 227 DNL 229
>gi|429249264|gb|AFZ77676.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K + +GP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGIFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CNERQANFLGK 434
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 212 LEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
++ G+ + K CF C K GH A++C K G C KCG GH M C
Sbjct: 377 MQKGIFKGPKRIKCFNCGKEGHLARNCRAPRKKG------CWKCGKEGHQMKDC 424
>gi|242032467|ref|XP_002463628.1| hypothetical protein SORBIDRAFT_01g003240 [Sorghum bicolor]
gi|241917482|gb|EER90626.1| hypothetical protein SORBIDRAFT_01g003240 [Sorghum bicolor]
Length = 258
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 78/197 (39%), Gaps = 32/197 (16%)
Query: 162 VLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK 221
++ K R P +F TC NC GH A C S + C+ C H +C
Sbjct: 61 LVCKNCRRPGHFAKECPSAPTCNNCNLPGHFAAECTS----QTICWNCKESGHIASECKN 116
Query: 222 AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYI 281
C C K GH A+DCP SG N ++C KC GH +++D E C
Sbjct: 117 EALCHTCNKTGHLARDCP---TSG-ANVKLCNKCFKPGH--------FAVDCTNERACNN 164
Query: 282 CRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSR-GETVEASPSS--- 337
CR GH I+ + C C GH + C ++ ++ P
Sbjct: 165 CRQPGH-----IARECKNDPVCNLCNVSGHVA-------RVCPKTTLASEIQGGPFRDIL 212
Query: 338 CYNCGAEGHFARECVSS 354
C CG GH +R C+++
Sbjct: 213 CRICGQPGHISRNCIAT 229
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 18/134 (13%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C+ C + GH+A +C ++ K C C H C+ + C C++ GH A++C
Sbjct: 120 CHTCNKTGHLARDCPTSGANVKLCNKCFKPGHFAVDCTNERACNNCRQPGHIAREC---- 175
Query: 243 KSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDL-----KEVQCYICRCFGHLCCVNISDAV 297
+N VC C SGH C + ++ +++ C IC GH IS
Sbjct: 176 ----KNDPVCNLCNVSGHVARVCPKTTLASEIQGGPFRDILCRICGQPGH-----ISRNC 226
Query: 298 PGEVSCFRCGQLGH 311
+ C CG GH
Sbjct: 227 IATIICDTCGGRGH 240
>gi|451170592|gb|AGF32985.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K + +GP+ C+NCG EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGIFKGPKRIK--------CFNCGREGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C G H A A+ + + + ++ G+ + K CF C + GH A++C
Sbjct: 350 CQGVGGPSHKARVLAEAMSQAQQTNIM--MQKGIFKGPKRIKCFNCGREGHLARNCRAPR 407
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 408 KKG------CWKCGKEGHQMKDC 424
>gi|366986513|ref|XP_003673023.1| hypothetical protein NCAS_0A00720 [Naumovozyma castellii CBS 4309]
gi|342298886|emb|CCC66632.1| hypothetical protein NCAS_0A00720 [Naumovozyma castellii CBS 4309]
Length = 161
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 20/102 (19%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKP--------------CFVCGSLEHGVRQCSKAQD-C 225
Q CYNC + GH++ +C K ++P C+ CG H + C +++ C
Sbjct: 65 QRCYNCNQTGHISKDCPEPRKPREPRNNGRFGANRHGMTCYKCGEPNHMAKDCPQSESKC 124
Query: 226 FICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
+ C K GH ++DCPD K +VC C ++GH C N
Sbjct: 125 YSCGKFGHMSRDCPDGPKE-----KVCYNCNETGHISRDCPN 161
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 66/161 (40%), Gaps = 40/161 (24%)
Query: 181 QTCYNCGEEGHMAVNCRSA-----------VKRKKP---------CFVCGSLEHGVRQCS 220
+ C+ CG+ GH+A +C S V+ + P C+ CG H +C+
Sbjct: 4 KACFVCGKIGHLAEDCDSEKLCYNCNKPGHVQSECPEPRTVEHKQCYNCGETGHVKSECT 63
Query: 221 KAQDCFICKKGGHRAKDCPDKHKS----------GFQNAQVCLKCGDSGHDMFSCRNSYS 270
Q C+ C + GH +KDCP+ K ++ C KCG+ H C S
Sbjct: 64 -VQRCYNCNQTGHISKDCPEPRKPREPRNNGRFGANRHGMTCYKCGEPNHMAKDCPQS-- 120
Query: 271 LDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGH 311
E +CY C FGH+ P E C+ C + GH
Sbjct: 121 -----ESKCYSCGKFGHM--SRDCPDGPKEKVCYNCNETGH 154
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 65/174 (37%), Gaps = 42/174 (24%)
Query: 203 KKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD----KHKSGFQ----------- 247
+K CFVCG + H C + C+ C K GH +CP+ +HK +
Sbjct: 3 QKACFVCGKIGHLAEDCDSEKLCYNCNKPGHVQSECPEPRTVEHKQCYNCGETGHVKSEC 62
Query: 248 NAQVCLKCGDSGHDMFSC---------RNSYSLDDLKE-VQCYICRCFGHLCCVNISDAV 297
Q C C +GH C RN+ + + CY C H+ D
Sbjct: 63 TVQRCYNCNQTGHISKDCPEPRKPREPRNNGRFGANRHGMTCYKCGEPNHM----AKDCP 118
Query: 298 PGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
E C+ CG+ GH + C E V CYNC GH +R+C
Sbjct: 119 QSESKCYSCGKFGHMS-------RDCPDGPKEKV------CYNCNETGHISRDC 159
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC---SKAQDCFICKKGGH 233
+R TCY CGE HMA +C + + C+ CG H R C K + C+ C + GH
Sbjct: 98 NRHGMTCYKCGEPNHMAKDCPQSESK---CYSCGKFGHMSRDCPDGPKEKVCYNCNETGH 154
Query: 234 RAKDCPD 240
++DCP+
Sbjct: 155 ISRDCPN 161
>gi|227057850|gb|ACP18904.1| gag protein [Human immunodeficiency virus 1]
Length = 505
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 11/73 (15%)
Query: 158 SDNIVL-RKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGV 216
S NI++ R RGP+ C+NCG+EGH+A NCR+ RKK C+ CG H +
Sbjct: 369 SGNILMQRSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGQEGHQM 418
Query: 217 RQCSKAQDCFICK 229
+ C++ Q F+ K
Sbjct: 419 KDCTERQANFLGK 431
>gi|118426910|gb|ABK91206.1| gag protein [Human immunodeficiency virus 1]
Length = 152
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|164415890|gb|AAU14975.2| gag protein [Human immunodeficiency virus 1]
Length = 490
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICK 229
C+NCG+EGH+A NCR+ RKK C+ CG EH ++ C++ Q F+ K
Sbjct: 389 CFNCGKEGHLARNCRAP--RKKGCWKCGREEHQMKDCTERQANFLGK 433
>gi|118426946|gb|ABK91224.1| gag protein [Human immunodeficiency virus 1]
Length = 151
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|118426866|gb|ABK91184.1| gag protein [Human immunodeficiency virus 1]
gi|118426868|gb|ABK91185.1| gag protein [Human immunodeficiency virus 1]
gi|118426872|gb|ABK91187.1| gag protein [Human immunodeficiency virus 1]
gi|118426878|gb|ABK91190.1| gag protein [Human immunodeficiency virus 1]
gi|118426898|gb|ABK91200.1| gag protein [Human immunodeficiency virus 1]
gi|118426908|gb|ABK91205.1| gag protein [Human immunodeficiency virus 1]
Length = 152
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|118426890|gb|ABK91196.1| gag protein [Human immunodeficiency virus 1]
Length = 168
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|61557124|ref|NP_001013174.1| zinc finger CCHC domain-containing protein 9 [Rattus norvegicus]
gi|54035475|gb|AAH83695.1| Zinc finger, CCHC domain containing 9 [Rattus norvegicus]
gi|149059001|gb|EDM10008.1| zinc finger, CCHC domain containing 9, isoform CRA_b [Rattus
norvegicus]
Length = 271
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C++ GH DCP +S +C +CG + H+M CR + +L
Sbjct: 120 RQAAKKNAMVCFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMTKCRANVDPALG 179
Query: 273 DLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+ +C++C GHL C N C CG + H
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCPDNTKGVYADGGGCKLCGSVEH 221
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 14/110 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C + ++ + C+ CGS EH + +C D CF+
Sbjct: 129 VCFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMTKCRANVDPALGEFPFAKCFV 188
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
C + GH ++ CPD K + + C CG H C + + D + V
Sbjct: 189 CGEMGHLSRSCPDNTKGVYADGGGCKLCGSVEHFKKDCPENQNSDRIITV 238
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGH---LCCVNISDAV 297
K ++ +NA VC C GH + C D+ CY C H C N+ A+
Sbjct: 119 KRQAAKKNAMVCFHCRQPGHGIADCPAVLESQDMGTGICYRCGSTEHEMTKCRANVDPAL 178
Query: 298 PGEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
GE CF CG++GH SC ++G V A C CG+ HF ++C
Sbjct: 179 -GEFPFAKCFVCGEMGHLS---RSCPD---NTKG--VYADGGGCKLCGSVEHFKKDC 226
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 33/89 (37%), Gaps = 14/89 (15%)
Query: 170 PRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRK------KPCFVCGSLEHGVRQC---- 219
P + D G CY CG H CR+ V CFVCG + H R C
Sbjct: 144 PAVLESQDMGTGICYRCGSTEHEMTKCRANVDPALGEFPFAKCFVCGEMGHLSRSCPDNT 203
Query: 220 ----SKAQDCFICKKGGHRAKDCPDKHKS 244
+ C +C H KDCP+ S
Sbjct: 204 KGVYADGGGCKLCGSVEHFKKDCPENQNS 232
>gi|409684286|gb|AFV34206.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K + +GP+ C+NCG EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGIFKGPKRIK--------CFNCGREGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
C G H A A+ + + + ++ G+ + K CF C + GH A++C
Sbjct: 349 ACQGVGGPSHKARVLAEAMSQAQQTNIM--MQKGIFKGPKRIKCFNCGREGHLARNCRAP 406
Query: 242 HKSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 407 RKKG------CWKCGKEGHQMKDC 424
>gi|409684276|gb|AFV34197.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K + +GP+ C+NCG EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGIFKGPKRIK--------CFNCGREGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
C G H A A+ + + + ++ G+ + K CF C + GH A++C
Sbjct: 349 ACQGVGGPSHKARVLAEAMSQAQQTNIM--MQKGIFKGPKRIKCFNCGREGHLARNCRAP 406
Query: 242 HKSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 407 RKKG------CWKCGKEGHQMKDC 424
>gi|118426864|gb|ABK91183.1| gag protein [Human immunodeficiency virus 1]
Length = 152
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|254569694|ref|XP_002491957.1| RING finger protein that interacts with the arginine
methyltransferase Hmt1p [Komagataella pastoris GS115]
gi|238031754|emb|CAY69677.1| RING finger protein that interacts with the arginine
methyltransferase Hmt1p [Komagataella pastoris GS115]
gi|328351548|emb|CCA37947.1| Gag-Pol polyprotein Contains: RecName: Full=Matrix protein p17;
Contains: RecName: Full=Capsid protein p24; Contains:
RecName: Full=Spacer peptide p2; Contains: RecName:
Full=Nucleocapsid protein p7; Contains: RecName:
Full=Transframe peptide; Contains: RecName: Full=p6-pol;
Short=p6*; Contains: RecName: Full=Protease
[Komagataella pastoris CBS 7435]
Length = 280
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 70/197 (35%), Gaps = 59/197 (29%)
Query: 171 RYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLE-HGVRQCSKAQDCFICK 229
RYF D C NC +GH C+ V C CG+++ H QC ++ C IC
Sbjct: 35 RYFGVTDTHETICANCHRKGHKRQQCKVVV-----CHSCGAVDDHYYTQCPQSVVCSICG 89
Query: 230 KGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC 289
GH +CPDK G C C H C + +CYI
Sbjct: 90 TKGHFRNNCPDK---GKMRNSYCRVCDSRAHSSDRCPTIW--------RCYIT------- 131
Query: 290 CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAR 349
+ D ++G + W CYNCG++GHF
Sbjct: 132 -IKTKD------------KIGMPQI-W---------------------CYNCGSKGHFGD 156
Query: 350 ECVSSSKVRKRNIDAST 366
EC+ R N++ S+
Sbjct: 157 ECLQQRSSRTPNLNGSS 173
>gi|154301789|ref|XP_001551306.1| hypothetical protein BC1G_10046 [Botryotinia fuckeliana B05.10]
Length = 533
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 74/188 (39%), Gaps = 32/188 (17%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRS----AVKRKKPCFVCGSLEHGVRQCSKAQD----C 225
+P DRG C C E GH +C + + CF CG + H VR C ++ C
Sbjct: 240 EPVDRGVPLCSRCNELGHTVKHCTEERVDGERVQVQCFNCGEIGHRVRDCPIPREDKFAC 299
Query: 226 FICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCF 285
CKK GH +K+CP+ + C C + GH FS R+ + C C
Sbjct: 300 RNCKKSGHSSKECPEPRSA---EGVECKNCNEIGH--FS-RDCPTGGGGDGGLCRNCNQP 353
Query: 286 GHLC--CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGA 343
GH C N + C C + GHTG + C + R + S C NC
Sbjct: 354 GHRAKDCTNERVMI-----CRNCDEEGHTG-------KECPKPR----DYSRVQCQNCKQ 397
Query: 344 EGHFAREC 351
GH C
Sbjct: 398 MGHTKVRC 405
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 26/100 (26%)
Query: 181 QTCYNCGEEGHMAVNCRS-AVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCP 239
++CYNCGEEGH C + AV R+ C IC++ GHRA CP
Sbjct: 52 RSCYNCGEEGHTKAECTNPAVAREF-----------------TGTCRICEQSGHRASGCP 94
Query: 240 DKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD--DLKEV 277
++C C + GH + C+N ++ D+++V
Sbjct: 95 SAP------PKLCNNCKEEGHSILECKNPRKIERNDVEDV 128
>gi|429249288|gb|AFZ77688.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K + +GP+ C+NCG EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NILMQKGIFKGPKRIK--------CFNCGREGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 10/84 (11%)
Query: 183 CYNCGEEGHMA-VNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
C G GH A V + + + P + ++ G+ + K CF C + GH A++C
Sbjct: 350 CQGVGGPGHKARVLAEAMSQVQHPNIL---MQKGIFKGPKRIKCFNCGREGHLARNCRAP 406
Query: 242 HKSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 407 RKKG------CWKCGKEGHQMKDC 424
>gi|78172851|gb|ABB29382.1| gag protein [Human immunodeficiency virus 1]
Length = 491
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 11/69 (15%)
Query: 160 NIVLRKL-LRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K RGPR C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 367 NIMMQKSNFRGPRRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 416
Query: 219 CSKAQDCFI 227
C++ Q F+
Sbjct: 417 CTERQANFL 425
>gi|391339398|ref|XP_003744037.1| PREDICTED: CCHC-type zinc finger protein CG3800-like [Metaseiulus
occidentalis]
Length = 182
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 56/130 (43%), Gaps = 23/130 (17%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ-DCFICKKGGHRAKDCPDK 241
CY C GH A +C+ R C+ C H + C + + C+ C K GH A++CP+
Sbjct: 54 CYKCNRLGHFARDCKETEDR---CYRCNGTGHIAKDCQQGEMSCYNCGKTGHIARECPEV 110
Query: 242 HKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEV 301
KS C +CG GH C +CY C FGH S P +
Sbjct: 111 DKS-------CYRCGKPGHIFRDCPED-------GQKCYTCGRFGHF-----SRECPLDR 151
Query: 302 SCFRCGQLGH 311
C+ CGQ GH
Sbjct: 152 RCYVCGQGGH 161
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 17/78 (21%)
Query: 178 RGWQTCYNCGEEGHMAVNC----RSAVKRKKP-------------CFVCGSLEHGVRQCS 220
+G +CYNCG+ GH+A C +S + KP C+ CG H R+C
Sbjct: 89 QGEMSCYNCGKTGHIARECPEVDKSCYRCGKPGHIFRDCPEDGQKCYTCGRFGHFSRECP 148
Query: 221 KAQDCFICKKGGHRAKDC 238
+ C++C +GGH +++C
Sbjct: 149 LDRRCYVCGQGGHISREC 166
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 60/157 (38%), Gaps = 36/157 (22%)
Query: 220 SKAQDCFICKKGGHRAKDC--PDKHKSGFQNAQV------------------CLKCGDSG 259
S +C+ C + GH A++C PD + C KC G
Sbjct: 2 SSGSECYRCHRTGHFARECSLPDDGERRGPRGGGRGGRGGGRGGFRGGFREKCYKCNRLG 61
Query: 260 HDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSC 319
H C+ + E +CY C GH+ D GE+SC+ CG+ GH
Sbjct: 62 HFARDCKET-------EDRCYRCNGTGHI----AKDCQQGEMSCYNCGKTGHIARECPEV 110
Query: 320 MQACARS--RGETVEASP---SSCYNCGAEGHFAREC 351
++C R G P CY CG GHF+REC
Sbjct: 111 DKSCYRCGKPGHIFRDCPEDGQKCYTCGRFGHFSREC 147
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 55/147 (37%), Gaps = 35/147 (23%)
Query: 206 CFVCGSLEHGVRQCSKAQD-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFS 264
C+ C L H R C + +D C+ C GH AKDC Q C CG +GH
Sbjct: 54 CYKCNRLGHFARDCKETEDRCYRCNGTGHIAKDCQ-------QGEMSCYNCGKTGHIARE 106
Query: 265 CRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACA 324
C + CY C GH+ D C+ CG+ GH + C
Sbjct: 107 CPEV-------DKSCYRCGKPGHI----FRDCPEDGQKCYTCGRFGHFS-------RECP 148
Query: 325 RSRGETVEASPSSCYNCGAEGHFAREC 351
R CY CG GH +REC
Sbjct: 149 LDR---------RCYVCGQGGHISREC 166
>gi|118426808|gb|ABK91155.1| gag protein [Human immunodeficiency virus 1]
Length = 152
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|118426888|gb|ABK91195.1| gag protein [Human immunodeficiency virus 1]
Length = 152
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|118426892|gb|ABK91197.1| gag protein [Human immunodeficiency virus 1]
Length = 150
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|118426798|gb|ABK91150.1| gag protein [Human immunodeficiency virus 1]
Length = 168
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|55979914|gb|AAV69371.1| gag protein [Human immunodeficiency virus 1]
Length = 150
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 20 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 69
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 70 GKEGHQMKDCTERQANFLGK 89
>gi|388524595|gb|AFK50202.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 140
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 11/74 (14%)
Query: 158 SDNIVL--RKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHG 215
S+N ++ R RGP+ C+NCG+EGH+A NCR+ RKK C+ CG H
Sbjct: 16 SNNAIMMQRSNFRGPKRIV-------KCFNCGKEGHIARNCRAP--RKKGCWKCGKEGHQ 66
Query: 216 VRQCSKAQDCFICK 229
+++CSK Q F+ K
Sbjct: 67 MKECSKRQANFLGK 80
>gi|115385340|ref|XP_001209217.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196909|gb|EAU38609.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 227
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 27/121 (22%)
Query: 183 CYNCGEEGHMAVNCRSAV-------------------------KRKKPCFVCGSLEHGVR 217
CYNC + GH+A NC + R C+ CG H R
Sbjct: 65 CYNCSQPGHLARNCPAPASGVGRGAGAPRGGFNGGFRGGYGGYPRAATCYKCGGPNHFAR 124
Query: 218 QC-SKAQDCFICKKGGHRAKDCPDKHKSGFQNA-QVCLKCGDSGHDMFSCRNSYSLDDLK 275
C ++A C+ C K GH ++DC + +A +VC KC +GH C N+ + ++
Sbjct: 125 DCQAQAMKCYACGKLGHISRDCTAPNGGPLSSAGKVCYKCAQAGHISRDCPNNEAAAPVQ 184
Query: 276 E 276
+
Sbjct: 185 Q 185
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 12/68 (17%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC---------SKAQDCFICKKGG 232
TCY CG H A +C++ + C+ CG L H R C S + C+ C + G
Sbjct: 112 TCYKCGGPNHFARDCQAQAMK---CYACGKLGHISRDCTAPNGGPLSSAGKVCYKCAQAG 168
Query: 233 HRAKDCPD 240
H ++DCP+
Sbjct: 169 HISRDCPN 176
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 62/182 (34%), Gaps = 42/182 (23%)
Query: 211 SLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYS 270
S+ G+ S A+ C+ C+ GH DCP +G C C GH +C S
Sbjct: 26 SVHKGLIGSSLAKQCYNCQGLGHVQADCPTLRLNGANGR--CYNCSQPGHLARNCPAPAS 83
Query: 271 ---------------------LDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQL 309
+ CY C H D + C+ CG+L
Sbjct: 84 GVGRGAGAPRGGFNGGFRGGYGGYPRAATCYKCGGPNHF----ARDCQAQAMKCYACGKL 139
Query: 310 GHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVRKRNIDASTPTF 369
GH + C G + ++ CY C GH +R+C N +A+ P
Sbjct: 140 GHIS-------RDCTAPNGGPLSSAGKVCYKCAQAGHISRDC--------PNNEAAAPVQ 184
Query: 370 RP 371
+P
Sbjct: 185 QP 186
>gi|451312306|gb|AGF34615.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSNVQHTNIMMQRGNFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|429249228|gb|AFZ77658.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 11/69 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K + +GP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGMFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFI 227
C++ Q F+
Sbjct: 424 CTERQANFL 432
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 212 LEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
++ G+ + K CF C K GH A++C K G C KCG GH M C
Sbjct: 377 MQKGMFKGPKRIKCFNCGKEGHLARNCRAPRKKG------CWKCGKEGHQMKDC 424
>gi|373842350|gb|AEY77164.1| gag protein [Human immunodeficiency virus]
Length = 498
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + + +GP+ C+NCG+EGH+A NCR+ RK+ C+ C
Sbjct: 365 EAMSQVQHTNILMQKGIFKGPKRIK--------CFNCGKEGHLARNCRAP--RKRGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C G GH A A+ + + + ++ G+ + K CF C K GH A++C
Sbjct: 350 CQGVGGPGHKARVLAEAMSQVQHTNIL--MQKGIFKGPKRIKCFNCGKEGHLARNCRAPR 407
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 408 KRG------CWKCGKEGHQMKDC 424
>gi|451170574|gb|AGF32969.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K + +GP+ C+NCG EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGIFKGPKRIK--------CFNCGREGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
C G H A A+ + + + ++ G+ + K CF C + GH A++C
Sbjct: 349 ACQGVGGPSHKARVLAEAMSQAQQTNIM--MQKGIFKGPKRIKCFNCGREGHLARNCRAP 406
Query: 242 HKSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 407 RKKG------CWKCGKEGHQMKDC 424
>gi|121708529|ref|XP_001272160.1| zinc knuckle transcription factor (CnjB), putative [Aspergillus
clavatus NRRL 1]
gi|119400308|gb|EAW10734.1| zinc knuckle transcription factor (CnjB), putative [Aspergillus
clavatus NRRL 1]
Length = 488
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 55/137 (40%), Gaps = 17/137 (12%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-----SKAQDCFICKKGGHRAKD 237
C NC GH A +C + + C CG+ +H C ++ +C C + GH AKD
Sbjct: 306 CVNCNASGHRARDCPEVRRDRYACRNCGAPDHKAADCPNPRSAEGVECKRCNEVGHFAKD 365
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISD 295
CP + C CG H C D+ V C C GH C D
Sbjct: 366 CPQAPPP-----RTCRNCGSEDHIARDCDKPR---DVSTVTCRNCDEVGHFSRDCTKKKD 417
Query: 296 AVPGEVSCFRCGQLGHT 312
+V C CG++GHT
Sbjct: 418 W--SKVKCNNCGEMGHT 432
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 40/94 (42%), Gaps = 11/94 (11%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ----DCFICKKGGHRAKDC 238
C NCG E H A C ++ CF CG H +C+K + C IC K GH A +C
Sbjct: 65 CRNCGNESHFARECPEP-RKGMACFNCGEEGHSKAECTKPRVFKGSCRICNKEGHPAAEC 123
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
PD+ VC C GH C + D
Sbjct: 124 PDRP------PDVCKNCQSEGHRTIECTENRKFD 151
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 57/159 (35%), Gaps = 43/159 (27%)
Query: 252 CLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC---------------------- 289
C CG+ GH C+ +L + EV+C C GH
Sbjct: 279 CSNCGEMGHTARGCKEERALIERVEVKCVNCNASGHRARDCPEVRRDRYACRNCGAPDHK 338
Query: 290 ---CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGH 346
C N A V C RC ++GH C QA P +C NCG+E H
Sbjct: 339 AADCPNPRSAE--GVECKRCNEVGHFA---KDCPQA----------PPPRTCRNCGSEDH 383
Query: 347 FARECVSS---SKVRKRNIDASTPTFRPHRENKDHSGIK 382
AR+C S V RN D R + KD S +K
Sbjct: 384 IARDCDKPRDVSTVTCRNCDEVGHFSRDCTKKKDWSKVK 422
>gi|118426940|gb|ABK91221.1| gag protein [Human immunodeficiency virus 1]
Length = 150
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|118426916|gb|ABK91209.1| gag protein [Human immunodeficiency virus 1]
Length = 151
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|55979923|gb|AAV69375.1| gag protein [Human immunodeficiency virus 1]
Length = 141
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|374350295|gb|AEZ35822.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 494
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 361 EAMSQVQQANVMMQRGNFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 410
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 411 GKEGHQMKDCTERQANFLGK 430
>gi|302914824|ref|XP_003051223.1| hypothetical protein NECHADRAFT_93654 [Nectria haematococca mpVI
77-13-4]
gi|256732161|gb|EEU45510.1| hypothetical protein NECHADRAFT_93654 [Nectria haematococca mpVI
77-13-4]
Length = 595
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 67/176 (38%), Gaps = 26/176 (14%)
Query: 139 EQKVETADNGDEGVTT---VEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVN 195
EQ E++D + + T V + ++ + P DP Q C CG H+A +
Sbjct: 249 EQTSESSDKHNAPIDTQRNVPSGSEALEQQRIYFPSATDP----TQMCLLCGRSTHLAPS 304
Query: 196 CRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKC 255
C + + C CGSLEH C Q C C++ GH A C +K + C C
Sbjct: 305 CPTLI-----CSSCGSLEHADICCPTRQRCDKCRQLGHGAAHCTEKLALTKEEGLACAVC 359
Query: 256 GDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGH 311
S D L+E + R F H + I V SC CG H
Sbjct: 360 S-------------SADHLEEQCTLLWRSF-HPDALTIKKVVSIPASCSLCGSDMH 401
>gi|55979925|gb|AAV69376.1| gag protein [Human immunodeficiency virus 1]
Length = 144
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|374429765|gb|AEZ51102.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 491
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ S+ ++ R +GPR C+NCG++GH+A NCR+ RKK C+ C
Sbjct: 361 EAMSHVQQSNVMMQRGNFKGPRKIK--------CFNCGKDGHLAKNCRAP--RKKGCWKC 410
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 411 GKEGHQMKDCNERQANFLGK 430
>gi|343420182|emb|CCD19181.1| nucleic acid binding protein, putative [Trypanosoma vivax Y486]
Length = 416
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 46/108 (42%), Gaps = 19/108 (17%)
Query: 206 CFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
CF G H + C+ CF C GH + +CP K ++C +C + GHDM C
Sbjct: 10 CFNRGHFGHSSQLCASKPVCFHCSMPGHTSTECPRK-----DMGRLCYRCKEPGHDMAKC 64
Query: 266 RNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTG 313
S QC++C GHL A EV C RC Q GH
Sbjct: 65 PQS--------PQCHMCNQTGHLV------AQCPEVLCNRCHQKGHMA 98
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Query: 182 TCYNCGEEGHMAVNC-RSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
C++C GH + C R + R C+ C H + +C ++ C +C + GH CP+
Sbjct: 28 VCFHCSMPGHTSTECPRKDMGRL--CYRCKEPGHDMAKCPQSPQCHMCNQTGHLVAQCPE 85
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNS 268
+C +C GH +C+ S
Sbjct: 86 V---------LCNRCHQKGHMASACKMS 104
>gi|341876702|gb|EGT32637.1| hypothetical protein CAEBREN_32053 [Caenorhabditis brenneri]
Length = 1129
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ----DCFICKKGGHRAKDC 238
C NCGEEGH A +C K ++PC C + H R C + + C C + GH +K+C
Sbjct: 665 CRNCGEEGHFARDCPQP-KVERPCRNCNEVGHFSRDCPQPKVPFGPCRNCGEEGHFSKEC 723
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSC 265
K + + + C +CG+ GH + C
Sbjct: 724 -TKERVRLEPTEPCRRCGEEGHWGYEC 749
>gi|225710718|gb|ACO11205.1| Zinc finger CCHC domain-containing protein 9 [Caligus
rogercresseyi]
Length = 402
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 40/102 (39%), Gaps = 17/102 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP--------CFVCGSLEHGVRQCS---------KAQD 224
CY C + GH +C A K CF CGS EH + C +
Sbjct: 255 VCYLCRKPGHFLSDCPEAEGSKSAKTVGTMGSCFKCGSAEHSSKDCQSKLKGEAAYRFAV 314
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCR 266
CFIC + GH AK CPD K + C CG H C+
Sbjct: 315 CFICNQTGHLAKACPDNPKGLYPKGGGCRFCGSVEHLKSECK 356
>gi|118426848|gb|ABK91175.1| gag protein [Human immunodeficiency virus 1]
Length = 152
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|374429753|gb|AEZ51093.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 489
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 363 EAMSHVQQTNVLMQRGNFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 412
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 413 GKEGHQMKDCTERQANFLGK 432
>gi|354497833|ref|XP_003511022.1| PREDICTED: zinc finger CCHC domain-containing protein 9-like
[Cricetulus griseus]
gi|344251598|gb|EGW07702.1| Zinc finger CCHC domain-containing protein 9 [Cricetulus griseus]
Length = 271
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C++ GH DCP +S +C +CG + H++ CR +L
Sbjct: 120 RQAAKKNAMVCFHCRRPGHGVADCPAALESQDMGTGICYRCGSTEHEITKCRARVDPALG 179
Query: 273 DLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+ +C++C GHL C N C CG + H
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCSENPKGVYADGGGCTLCGSVEH 221
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 14/110 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C GH +C +A++ + C+ CGS EH + +C D CF+
Sbjct: 129 VCFHCRRPGHGVADCPAALESQDMGTGICYRCGSTEHEITKCRARVDPALGEFPFAKCFV 188
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
C + GH ++ C + K + + C CG H C + + D + V
Sbjct: 189 CGEMGHLSRSCSENPKGVYADGGGCTLCGSVEHFKKDCPENQNSDRMVTV 238
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 13/116 (11%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVP 298
K ++ +NA VC C GH + C + D+ CY C H C D
Sbjct: 119 KRQAAKKNAMVCFHCRRPGHGVADCPAALESQDMGTGICYRCGSTEHEITKCRARVDPAL 178
Query: 299 GEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
GE CF CG++GH ++C+ + + V A C CG+ HF ++C
Sbjct: 179 GEFPFAKCFVCGEMGHLS-------RSCSEN-PKGVYADGGGCTLCGSVEHFKKDC 226
>gi|331029868|gb|AEC50062.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K +GP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGFFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
>gi|328834216|gb|AEB52650.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 11/81 (13%)
Query: 150 EGVTTVEISDNIVLRKL-LRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFV 208
E ++ V+ ++ ++++K RGP+ C+NCG+EGH+A NCR+ RKK C+
Sbjct: 365 EAMSQVQNANIMMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWK 414
Query: 209 CGSLEHGVRQCSKAQDCFICK 229
CG H ++ C++ Q F+ K
Sbjct: 415 CGKEGHQMKDCTERQANFLGK 435
>gi|18699193|gb|AAL78453.1|AF413987_8 gag polyprotein [Human immunodeficiency virus 1]
Length = 497
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 364 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 413
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 414 GKEGHQMKNCTERQANFL 431
>gi|380022738|ref|XP_003695195.1| PREDICTED: uncharacterized protein LOC100868132 [Apis florea]
Length = 420
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 10/89 (11%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKK---PCFVCGSLEHGVRQCS-------KAQDCFICKKG 231
C++C + GH +C + C+ CGS EH +C + CFIC++
Sbjct: 282 VCFHCRKAGHNLSDCPELGSEQAGTGICYKCGSTEHTHFECKVTKPTEYRYATCFICREQ 341
Query: 232 GHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
GH AK CPD K + C CGD H
Sbjct: 342 GHIAKQCPDNPKGIYPQGGACKICGDVTH 370
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNA--QVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYIC 282
CF C+K GH DCP+ G + A +C KCG + H F C+ + + + C+IC
Sbjct: 283 CFHCRKAGHNLSDCPE---LGSEQAGTGICYKCGSTEHTHFECKVTKPT-EYRYATCFIC 338
Query: 283 RCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
R GH+ C N P +C CG + H
Sbjct: 339 REQGHIAKQCPDNPKGIYPQGGACKICGDVTH 370
>gi|271278073|emb|CBI69646.1| gag polyprotein [HIV-1 M:B 2001_KC134]
Length = 497
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICK 229
C+NCG+EGH+A NCR+ RKK C+ CG H ++ C++ QD F+ K
Sbjct: 392 CFNCGKEGHIAKNCRAP--RKKGCWKCGKEGHQMKDCTERQDNFLGK 436
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 31/83 (37%), Gaps = 6/83 (7%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C G GH A A+ + + R K CF C K GH AK+C
Sbjct: 350 CQGVGGPGHKARVLAEAMSQVTNPATIMIQKGNFRNQRKTVKCFNCGKEGHIAKNCRAPR 409
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 410 KKG------CWKCGKEGHQMKDC 426
>gi|121645193|gb|ABM63552.1| gag protein [Human immunodeficiency virus 1]
Length = 493
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 363 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 412
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 413 GKEGHQMKDCTERQANFLGK 432
>gi|55979916|gb|AAV69372.1| gag protein [Human immunodeficiency virus 1]
Length = 152
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|282598041|gb|ADA83285.1| gag protein [Human immunodeficiency virus 1]
Length = 490
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R RG R C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 363 EAMSQVQHTNIMMQRSNFRGQRKIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 412
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ CS+ Q F+ K
Sbjct: 413 GKEGHQMKDCSERQANFLGK 432
>gi|255986766|gb|ACU50765.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 10/81 (12%)
Query: 150 EGVTTVEISDNIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFV 208
E ++ V S I+++K RGPR C+NCG+EGH+A NCR+ RK+ C+
Sbjct: 365 EAMSQVTNSATIMMQKGNFRGPRKII-------KCFNCGKEGHLAKNCRAP--RKRGCWK 415
Query: 209 CGSLEHGVRQCSKAQDCFICK 229
CG H ++ C++ Q F+ K
Sbjct: 416 CGKEGHQMKDCTERQANFLGK 436
>gi|326927837|ref|XP_003210095.1| PREDICTED: cellular nucleic acid-binding protein-like [Meleagris
gallopavo]
Length = 149
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 63/148 (42%), Gaps = 34/148 (22%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP------------------CFVCGSLEHGVRQCSKAQD 224
C+ CG GH A C + + R + C+ CG H + C +D
Sbjct: 6 CFKCGRTGHWARECPTGIGRGRGMRSRGRGFQFMSSSLPDICYRCGESGHLAKDCDLQED 65
Query: 225 -CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICR 283
C+ C +GGH AKDC + + + Q C CG GH C D E +CY C
Sbjct: 66 ACYNCGRGGHIAKDCKEPKR---EREQCCYNCGKPGHLARDC------DHADEQKCYSCG 116
Query: 284 CFGHLCCVNISDAVPGEVSCFRCGQLGH 311
FGH+ D +V C+RCG+ GH
Sbjct: 117 EFGHI----QKDCT--KVKCYRCGESGH 138
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 12/82 (14%)
Query: 182 TCYNCGEEGHMAVNCRSAVK-RKKPCFVCGSLEHGVRQCSKA--QDCFICKKGGHRAKDC 238
CYNCG GH+A +C+ + R++ C+ CG H R C A Q C+ C + GH KDC
Sbjct: 66 ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDC 125
Query: 239 PDKHKSGFQNAQVCLKCGDSGH 260
C +CG+SGH
Sbjct: 126 ---------TKVKCYRCGESGH 138
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDC 238
Q CYNCG+ GH+A +C A ++K C+ CG H + C+K + C+ C + GH A++C
Sbjct: 89 QCCYNCGKPGHLARDCDHADEQK--CYSCGEFGHIQKDCTKVK-CYRCGESGHLAREC 143
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 62/168 (36%), Gaps = 63/168 (37%)
Query: 222 AQDCFICKKGGHRAKDCPDKHKSG---------FQNAQ-----VCLKCGDSGHDMFSCRN 267
+ +CF C + GH A++CP G FQ +C +CG+SGH C
Sbjct: 3 SNECFKCGRTGHWARECPTGIGRGRGMRSRGRGFQFMSSSLPDICYRCGESGHLAKDC-- 60
Query: 268 SYSLDDLKEVQCYICRCFGHL-------------CCVNISDAVPGEVS----------CF 304
DL+E CY C GH+ CC N PG ++ C+
Sbjct: 61 -----DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGK--PGHLARDCDHADEQKCY 113
Query: 305 RCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECV 352
CG+ GH + + CY CG GH AREC
Sbjct: 114 SCGEFGHI-----------------QKDCTKVKCYRCGESGHLARECT 144
>gi|118426936|gb|ABK91219.1| gag protein [Human immunodeficiency virus 1]
Length = 168
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 69 GKEGHQMKDCTERQANFL 86
>gi|32766032|gb|AAP69081.1| gag protein [Human immunodeficiency virus 1]
Length = 494
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 10/71 (14%)
Query: 160 NIVLRKL-LRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K +GPR C+NCG+EGH+A NCR+ RKK C+ CG H +++
Sbjct: 370 NIMMQKSNFKGPRRII-------KCFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKE 420
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 421 CTERQANFLGK 431
>gi|387019991|gb|AFJ52113.1| Zinc finger CCHC domain-containing protein 9-like [Crotalus
adamanteus]
Length = 263
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 14/105 (13%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C + ++ + C+ CGS EH + +C D CFI
Sbjct: 121 VCFHCRKPGHGVADCPAVLESQDMGTGICYRCGSTEHEINKCKAKIDPALGEFPYAKCFI 180
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
C + GH ++ CPD K + C CG H C + S D
Sbjct: 181 CGEMGHLSRSCPDNPKGLYAEGGSCRICGSVEHFKRDCPENQSSD 225
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLDDLKEVQCYIC 282
CF C+K GH DCP +S +C +CG + H++ C+ +L + +C+IC
Sbjct: 122 CFHCRKPGHGVADCPAVLESQDMGTGICYRCGSTEHEINKCKAKIDPALGEFPYAKCFIC 181
Query: 283 RCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
GHL C N SC CG + H
Sbjct: 182 GEMGHLSRSCPDNPKGLYAEGGSCRICGSVEH 213
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 43/110 (39%), Gaps = 13/110 (11%)
Query: 247 QNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVPGEVS-- 302
+N VC C GH + C D+ CY C H C D GE
Sbjct: 117 KNIMVCFHCRKPGHGVADCPAVLESQDMGTGICYRCGSTEHEINKCKAKIDPALGEFPYA 176
Query: 303 -CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
CF CG++GH ++C + + A SC CG+ HF R+C
Sbjct: 177 KCFICGEMGHLS-------RSCP-DNPKGLYAEGGSCRICGSVEHFKRDC 218
>gi|330915239|ref|XP_003296952.1| hypothetical protein PTT_07202 [Pyrenophora teres f. teres 0-1]
gi|311330642|gb|EFQ94956.1| hypothetical protein PTT_07202 [Pyrenophora teres f. teres 0-1]
Length = 389
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 16/94 (17%)
Query: 264 SCRNSYSLDDLKE---VQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGHTGLHWN 317
+ RN+ ++ K CY CR GHL C V + P C++C + GH
Sbjct: 266 AARNTPAIQGAKSQVPFMCYKCRGEGHLARNCTVKLE---PKPAICYKCHEAGHIA---- 318
Query: 318 SCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
+ C + + P +CYNCG GH AREC
Sbjct: 319 ---RKCTKVPPAPITKKPFTCYNCGESGHMAREC 349
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP-CFVCGSLEHGVRQCSKAQ---------DCFICKKGG 232
CY C EGH+A NC ++ K C+ C H R+C+K C+ C + G
Sbjct: 284 CYKCRGEGHLARNCTVKLEPKPAICYKCHEAGHIARKCTKVPPAPITKKPFTCYNCGESG 343
Query: 233 HRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
H A++C + ++ ++ GD G + +C
Sbjct: 344 HMARECTLLDR---RHVVPVIEVGDFGGGLQTC 373
>gi|118426956|gb|ABK91229.1| gag protein [Human immunodeficiency virus 1]
Length = 149
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|87131043|gb|ABD24125.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 11/81 (13%)
Query: 150 EGVTTVEISDNIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFV 208
E ++ V + NI+++K RG R C+NCG+EGH+A NCR+ RKK C+
Sbjct: 363 EAMSQVHQTTNIMMQKGNFRGQRRIK--------CFNCGKEGHLAKNCRAP--RKKGCWK 412
Query: 209 CGSLEHGVRQCSKAQDCFICK 229
CG H ++ C++ Q F+ K
Sbjct: 413 CGKEGHQMKDCTERQANFLGK 433
>gi|429249214|gb|AFZ77651.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K + +GP+ C+NCG EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGIFKGPKRIK--------CFNCGREGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
>gi|407741470|gb|AFU33891.1| gag protein [Human immunodeficiency virus 1]
Length = 1432
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C+NCG+EGH+A NCR+ RKK C+ CG H ++ C++ Q F + + K
Sbjct: 390 CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKDCTERQANFFRENLAFQGKAREFSS 447
Query: 243 KSGFQNAQVCLKCGDSGHD 261
+ N+ K GD G D
Sbjct: 448 EQTRANSPTSRKLGDGGRD 466
>gi|55979890|gb|AAV69360.1| gag protein [Human immunodeficiency virus 1]
Length = 145
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|396075649|gb|AFN81333.1| gag protein [Human immunodeficiency virus 1]
Length = 494
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ + ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQQAGIMMQRGNFKGPRKIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
C G GH A A+ + + + ++ G + + CF C K GH A++C
Sbjct: 349 ACQGVGGPGHKARVLAEAMSQVQQAGIM--MQRGNFKGPRKIKCFNCGKEGHLARNCRAP 406
Query: 242 HKSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 407 RKKG------CWKCGKEGHQMKDC 424
>gi|396496524|ref|XP_003844764.1| hypothetical protein LEMA_P000720.1 [Leptosphaeria maculans JN3]
gi|312221345|emb|CBY01285.1| hypothetical protein LEMA_P000720.1 [Leptosphaeria maculans JN3]
Length = 622
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 71/185 (38%), Gaps = 30/185 (16%)
Query: 177 DRGWQTCYNCGEEGHMAVNC------RSAVKRKKPCFVCGSLEHGVRQCSK----AQDCF 226
DRG C NCGE GH+ +C R + + + C C + H R C+K C
Sbjct: 415 DRGVPLCGNCGELGHVRKHCKQEQPERQSHQPEITCVNCHEIGHRARDCNKERLNPHACR 474
Query: 227 ICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFG 286
CKK GH +KDCP+ + C KC +GH C N + C C
Sbjct: 475 NCKKDGHNSKDCPEPRSA---EGVECRKCMQTGHFSKDCPN------VAARTCRNCDSTE 525
Query: 287 HLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGH 346
H+ P + C C GH + C + R + S C NCG GH
Sbjct: 526 HIAKDCDQPKNPDKTQCRNCDLTGHFS-------RDCPKPR----DYSRVKCSNCGDMGH 574
Query: 347 FAREC 351
+ C
Sbjct: 575 TIKRC 579
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 183 CYNCGEEGHMAVNCRSA-VKR--KKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDC 238
CYNCGE GH +C + V+R C CG H +R C +Q C +C + GHRA +C
Sbjct: 228 CYNCGEVGHNKADCTNPRVERAFTGTCNGCGVEGHTIRDC-PSQKCKLCDQPGHRALEC 285
>gi|300719877|gb|ADK32890.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 9/72 (12%)
Query: 158 SDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVR 217
S N++ R +GPR C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 369 SMNMMQRSNFKGPRRII-------KCFNCGKEGHIAKNCRAP--RKKGCWKCGKEGHQMK 419
Query: 218 QCSKAQDCFICK 229
C++ Q F+ K
Sbjct: 420 DCTERQANFLGK 431
>gi|294867092|ref|XP_002764960.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239864813|gb|EEQ97677.1| cellular nucleic acid binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 680
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 74/221 (33%), Gaps = 81/221 (36%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCP-- 239
C CG+ GH AV C C CG H +RQC Q C C + GH+A +CP
Sbjct: 477 MCDKCGKPGHPAVWCGVI------CRNCGQEGHMIRQCPMPQVCRNCGQPGHKAGECPNP 530
Query: 240 -------------DKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC-- 284
+ SG CL+C GH C N C+ CRC
Sbjct: 531 PSRYETKEADPNENPMTSGRHGPVQCLQCLQYGHIARDCPNPRV--------CHRCRCGV 582
Query: 285 FGH--------LCCVNI---------SDAVPG-----------------EVSCFRCGQLG 310
GH + I + +PG + C +C Q G
Sbjct: 583 AGHESRQCPHPVLASQILPNRGILPEKNPIPGADSTEGGVVSSSRSVNSNIQCLQCLQYG 642
Query: 311 HTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
H + C +R +CY CG GH +R+C
Sbjct: 643 HIS-------KDCPNAR---------ACYRCGQPGHESRQC 667
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 62/170 (36%), Gaps = 58/170 (34%)
Query: 181 QTCYNCGEEGHMAVNC-----RSAVKRKKPC-FVCGSLEHGVRQCSKAQDCFICKKGGHR 234
Q C NCG+ GH A C R K P S HG Q C C + GH
Sbjct: 512 QVCRNCGQPGHKAGECPNPPSRYETKEADPNENPMTSGRHGPVQ------CLQCLQYGHI 565
Query: 235 AKDCPDKHKSGFQNAQVC--LKCGDSGHDMFSC------------------RNSYSLDDL 274
A+DCP N +VC +CG +GH+ C +N D
Sbjct: 566 ARDCP--------NPRVCHRCRCGVAGHESRQCPHPVLASQILPNRGILPEKNPIPGADS 617
Query: 275 KE-------------VQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGH 311
E +QC C +GH IS P +C+RCGQ GH
Sbjct: 618 TEGGVVSSSRSVNSNIQCLQCLQYGH-----ISKDCPNARACYRCGQPGH 662
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 79/221 (35%), Gaps = 49/221 (22%)
Query: 160 NIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKK--------PCFVCGS 211
N+VL +L D C NCG GH A C S + + P G
Sbjct: 369 NVVLASMLGKRERSRSRDATVGRCANCGGRGHEASLCPSPIMDEPEGTVSEVHPTTPDGE 428
Query: 212 LEHGVRQCSKAQD--CFICKKGGHRAKDCPDKHKSG--FQ-----NAQVCLKCGDSGHDM 262
+E + + + C C + GHRA++CP+ FQ NA +C KCG GH
Sbjct: 429 VEGPASEYRQPFNGKCANCFRFGHRARECPNLTTCAKCFQAAACPNAIMCDKCGKPGHPA 488
Query: 263 FSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQA 322
C V C C GH+ P C CGQ GH +
Sbjct: 489 VWC----------GVICRNCGQEGHMI-----RQCPMPQVCRNCGQPGHKAGECPN---- 529
Query: 323 CARSRGETVEASPS------------SCYNCGAEGHFAREC 351
SR ET EA P+ C C GH AR+C
Sbjct: 530 -PPSRYETKEADPNENPMTSGRHGPVQCLQCLQYGHIARDC 569
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 61/179 (34%), Gaps = 42/179 (23%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVR--QCSKAQD--------CFICKKGG 232
C NC GH A C + K CF + + + +C K C C + G
Sbjct: 444 CANCFRFGHRARECPNLTTCAK-CFQAAACPNAIMCDKCGKPGHPAVWCGVICRNCGQEG 502
Query: 233 HRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVN 292
H + CP QVC CG GH C N S + KE
Sbjct: 503 HMIRQCP--------MPQVCRNCGQPGHKAGECPNPPSRYETKEADPNE---------NP 545
Query: 293 ISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
++ G V C +C Q GH + + C R R CG GH +R+C
Sbjct: 546 MTSGRHGPVQCLQCLQYGHIARDCPN-PRVCHRCR-------------CGVAGHESRQC 590
>gi|118426816|gb|ABK91159.1| gag protein [Human immunodeficiency virus 1]
Length = 153
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 20 EAMSQVQHANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 69
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 70 GKEGHQMKDCTERQANFLGK 89
>gi|25166782|gb|AAN73575.1|AF484493_2 gag polyprotein precursor [Human immunodeficiency virus 1]
Length = 498
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K RGP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQLKD 423
Query: 219 CSKAQDCFICK 229
CS+ Q F+ K
Sbjct: 424 CSERQANFLGK 434
>gi|68522114|gb|AAY98703.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 10/71 (14%)
Query: 160 NIVLRKL-LRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K +GPR C+NCG+EGH+A NCR+ RKK C+ CG H V+
Sbjct: 372 NIMMQKSNFKGPRRII-------KCFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQVKD 422
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 423 CTERQANFLGK 433
>gi|331029862|gb|AEC50059.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ + ++ + + +GP+ C+NCG EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQNTKIMMQKGIFKGPKRIK--------CFNCGREGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C G GH A A+ + + + ++ G+ + K CF C + GH A++C
Sbjct: 350 CQGVGGPGHKARVLAEAMSQVQNTKIM--MQKGIFKGPKRIKCFNCGREGHLARNCRAPR 407
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 408 KKG------CWKCGKEGHQMKDC 424
>gi|259127950|gb|ACV94746.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ + ++ R RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQHPNIMMQRGNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 415 GKEGHQMKDCTERQANFL 432
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 10/85 (11%)
Query: 182 TCYNCGEEGHMA-VNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPD 240
C G GH A V + + + P + ++ G + K CF C K GH A++C
Sbjct: 349 ACQGVGGPGHKARVLAEAMSQVQHPNIM---MQRGNFRGPKRIKCFNCGKEGHLARNCRA 405
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 406 PRKKG------CWKCGKEGHQMKDC 424
>gi|32766028|gb|AAP69079.1| gag protein [Human immunodeficiency virus 1]
Length = 494
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 10/71 (14%)
Query: 160 NIVLRKL-LRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K +GPR C+NCG+EGH+A NCR+ RKK C+ CG H +++
Sbjct: 370 NIMMQKSNFKGPRRII-------KCFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKE 420
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 421 CTERQANFLGK 431
>gi|412986462|emb|CCO14888.1| predicted protein [Bathycoccus prasinos]
Length = 206
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 45/143 (31%)
Query: 182 TCYNCGEEGHMAVNCR-------SAVKRKKPCFVCGSLEHGVRQCSKAQD------CFIC 228
C+ C GH +CR ++ + +K C+ CGS EH +R C++ CF+C
Sbjct: 58 VCFGCRRTGHSLRDCRYHNGGDANSSRGQKICYNCGSSEHALRDCTEPNSNFAFAKCFVC 117
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
K GH +++CP+ +KSG + QC IC+ HL
Sbjct: 118 DKVGHLSRNCPE-NKSGLY--------------------------VNGGQCRICKGVDHL 150
Query: 289 CCVNISDAVPGEVSCFRCGQLGH 311
+ P + +C RCG+ GH
Sbjct: 151 -----ARDCPKQGACLRCGEEGH 168
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 54/134 (40%), Gaps = 26/134 (19%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNA----QVCLKCGDSGHDMFSCRNSYSLDDLKEVQCY 280
CF C++ GH +DC H G N+ ++C CG S H + C S + +C+
Sbjct: 59 CFGCRRTGHSLRDC-RYHNGGDANSSRGQKICYNCGSSEHALRDCTEPNS--NFAFAKCF 115
Query: 281 ICRCFGHL---CCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSS 337
+C GHL C N S C C + H + C + +
Sbjct: 116 VCDKVGHLSRNCPENKSGLYVNGGQCRICKGVDHL-------ARDCPKQ---------GA 159
Query: 338 CYNCGAEGHFAREC 351
C CG EGH ++EC
Sbjct: 160 CLRCGEEGHLSKEC 173
>gi|448510245|ref|XP_003866311.1| hypothetical protein CORT_0A04830 [Candida orthopsilosis Co 90-125]
gi|380350649|emb|CCG20871.1| hypothetical protein CORT_0A04830 [Candida orthopsilosis Co 90-125]
Length = 401
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 98/263 (37%), Gaps = 72/263 (27%)
Query: 117 KKKKKEADKIEIEDQSVIVRKEEQ--KVETADNGDEGVTTV---EISDNIVLRKLLRGP- 170
K K+ + + + IE I+R +E V T + DE + + E++D+ LRG
Sbjct: 15 KLKRHKHEPVSIES---IIRGDETTPPVNTTNKKDESIASFAIEEVNDDPDELINLRGEG 71
Query: 171 RYF---DPPDRGWQT----CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ 223
RYF DP + Q+ C NC E GH C+ + C CG
Sbjct: 72 RYFGVIDPDNENQQSSGPICDNCQERGHRRAQCKVVI-----CHKCG------------- 113
Query: 224 DCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICR 283
K G H CP + VCL+CG+ GH + C++ K C C
Sbjct: 114 -----KVGDHYESQCP--------STVVCLRCGEKGHYISQCKSKVR----KRQYCRSCD 156
Query: 284 CFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPS-SCYNCG 342
F H G+ C W S + + E P+ CYNCG
Sbjct: 157 TFQH-----------GDEDCPSI---------WRSYLTKRTANEDEESLVLPNIYCYNCG 196
Query: 343 AEGHFARECVSSSKVRKRNIDAS 365
++ HF EC R N+ ++
Sbjct: 197 SDEHFGDECGKQRSSRIPNLGSA 219
>gi|90086147|dbj|BAE91626.1| unnamed protein product [Macaca fascicularis]
Length = 270
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C +A++ + C+ CGS EH + +C D CF+
Sbjct: 128 VCFHCRKPGHGVADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 187
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
C + GH ++ CPD K + + C CG H C S + + + V
Sbjct: 188 CGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPESQNSERMVTV 237
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C+K GH DCP ++ +C +CG + H++ C+ +L
Sbjct: 119 RQAAKKNAMVCFHCRKPGHGVADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 178
Query: 273 DLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+ +C++C GHL C N C CG + H
Sbjct: 179 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEH 220
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 13/119 (10%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVP 298
K ++ +NA VC C GH + C + D+ CY C H C D
Sbjct: 118 KRQAAKKNAMVCFHCRKPGHGVADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPAL 177
Query: 299 GEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
GE CF CG++GH SC + + A C CG+ H ++C S
Sbjct: 178 GEFPFAKCFVCGEMGHLS---RSC-----PDNPKGLYADGGGCKLCGSVEHLKKDCPES 228
>gi|32766026|gb|AAP69078.1| gag protein [Human immunodeficiency virus 1]
Length = 494
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 10/71 (14%)
Query: 160 NIVLRKL-LRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K +GPR C+NCG+EGH+A NCR+ RKK C+ CG H +++
Sbjct: 370 NIMMQKSNFKGPRRII-------KCFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKE 420
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 421 CTERQANFLGK 431
>gi|371559534|gb|AEX36710.1| gag protein [Human immunodeficiency virus 1]
Length = 494
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 11/71 (15%)
Query: 160 NIVLRKL-LRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K RGP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
>gi|14150027|ref|NP_115656.1| zinc finger CCHC domain-containing protein 9 [Homo sapiens]
gi|196259803|ref|NP_001124507.1| zinc finger CCHC domain-containing protein 9 [Homo sapiens]
gi|196259805|ref|NP_001124508.1| zinc finger CCHC domain-containing protein 9 [Homo sapiens]
gi|426349360|ref|XP_004042275.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 1
[Gorilla gorilla gorilla]
gi|426349362|ref|XP_004042276.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 2
[Gorilla gorilla gorilla]
gi|426349364|ref|XP_004042277.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 3
[Gorilla gorilla gorilla]
gi|116242852|sp|Q8N567.2|ZCHC9_HUMAN RecName: Full=Zinc finger CCHC domain-containing protein 9
gi|12224957|emb|CAC21654.1| hypothetical protein [Homo sapiens]
gi|119616276|gb|EAW95870.1| zinc finger, CCHC domain containing 9, isoform CRA_a [Homo sapiens]
gi|119616277|gb|EAW95871.1| zinc finger, CCHC domain containing 9, isoform CRA_a [Homo sapiens]
gi|119616279|gb|EAW95873.1| zinc finger, CCHC domain containing 9, isoform CRA_a [Homo sapiens]
gi|189054324|dbj|BAG36844.1| unnamed protein product [Homo sapiens]
Length = 271
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C +A++ + C+ CGS EH + +C D CF+
Sbjct: 129 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 188
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
C + GH ++ CPD K + + C CG H C S + + + V
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPESQNSERMVTV 238
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C+K GH DCP ++ +C +CG + H++ C+ +L
Sbjct: 120 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 179
Query: 273 DLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+ +C++C GHL C N C CG + H
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEH 221
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 33/89 (37%), Gaps = 14/89 (15%)
Query: 170 PRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRK------KPCFVCGSLEHGVRQC---- 219
P + D G CY CG H C++ V CFVCG + H R C
Sbjct: 144 PAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFVCGEMGHLSRSCPDNP 203
Query: 220 ----SKAQDCFICKKGGHRAKDCPDKHKS 244
+ C +C H KDCP+ S
Sbjct: 204 KGLYADGGGCKLCGSVEHLKKDCPESQNS 232
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 13/119 (10%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVP 298
K ++ +NA VC C GH + C + D+ CY C H C D
Sbjct: 119 KRQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPAL 178
Query: 299 GEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
GE CF CG++GH SC + + A C CG+ H ++C S
Sbjct: 179 GEFPFAKCFVCGEMGHLS---RSC-----PDNPKGLYADGGGCKLCGSVEHLKKDCPES 229
>gi|226503759|ref|NP_001149324.1| DNA-binding protein HEXBP [Zea mays]
gi|194697746|gb|ACF82957.1| unknown [Zea mays]
gi|195626396|gb|ACG35028.1| DNA-binding protein HEXBP [Zea mays]
gi|224035195|gb|ACN36673.1| unknown [Zea mays]
gi|414867604|tpg|DAA46161.1| TPA: DNA-binding protein HEXBP isoform 1 [Zea mays]
gi|414867605|tpg|DAA46162.1| TPA: DNA-binding protein HEXBP isoform 2 [Zea mays]
Length = 261
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 76/207 (36%), Gaps = 46/207 (22%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C NC GH A C S C CG H +CS C+ CK+ GH A CP
Sbjct: 41 CNNCKRPGHFARECPSVAV----CHTCGLPGHIAAECSSKGVCWNCKEPGHMANSCP--- 93
Query: 243 KSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVS 302
N +C CG SGH C + + + + C C GH + E +
Sbjct: 94 -----NEGICRNCGKSGHIARDC-TAPPVPPGEVILCSNCYKPGHF-----REECTNEKA 142
Query: 303 CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVRKRNI 362
C C Q GH +R T + C C GH AR+C S + +R
Sbjct: 143 CNNCRQSGHL-------------ARNCTND---PVCNLCNVAGHLARQCPKSDTLGER-- 184
Query: 363 DASTPTFRPHRENKDHSGIKSAPHDLG 389
P FR G+ + HD+G
Sbjct: 185 -GGPPPFR---------GVGAPFHDVG 201
>gi|118426854|gb|ABK91178.1| gag protein [Human immunodeficiency virus 1]
Length = 151
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|118426966|gb|ABK91234.1| gag protein [Human immunodeficiency virus 1]
Length = 157
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 69 GKEGHQMKDCTERQANFL 86
>gi|114599363|ref|XP_526871.2| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 6
[Pan troglodytes]
gi|114599365|ref|XP_001149663.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 3
[Pan troglodytes]
gi|114599369|ref|XP_001149795.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 5
[Pan troglodytes]
gi|410222042|gb|JAA08240.1| zinc finger, CCHC domain containing 9 [Pan troglodytes]
gi|410264124|gb|JAA20028.1| zinc finger, CCHC domain containing 9 [Pan troglodytes]
gi|410297934|gb|JAA27567.1| zinc finger, CCHC domain containing 9 [Pan troglodytes]
Length = 271
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C +A++ + C+ CGS EH + +C D CF+
Sbjct: 129 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 188
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
C + GH ++ CPD K + + C CG H C S + + + V
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPESQNSERMVTV 238
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C+K GH DCP ++ +C +CG + H++ C+ +L
Sbjct: 120 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 179
Query: 273 DLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+ +C++C GHL C N C CG + H
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEH 221
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 13/119 (10%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVP 298
K ++ +NA VC C GH + C + D+ CY C H C D
Sbjct: 119 KRQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPAL 178
Query: 299 GEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
GE CF CG++GH SC + + A C CG+ H ++C S
Sbjct: 179 GEFPFAKCFVCGEMGHLS---RSC-----PDNPKGLYADGGGCKLCGSVEHLKKDCPES 229
>gi|209413744|ref|NP_001127522.1| zinc finger CCHC domain-containing protein 9 [Pongo abelii]
gi|55730972|emb|CAH92203.1| hypothetical protein [Pongo abelii]
Length = 271
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C +A++ + C+ CGS EH + +C D CF+
Sbjct: 129 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 188
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
C + GH ++ CPD K + + C CG H C S + + + V
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPESQNSERMVTV 238
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C+K GH DCP ++ +C +CG + H++ C+ +L
Sbjct: 120 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 179
Query: 273 DLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+ +C++C GHL C N C CG + H
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEH 221
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 13/119 (10%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVP 298
K ++ +NA VC C GH + C + D+ CY C H C D
Sbjct: 119 KRQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPAL 178
Query: 299 GEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
GE CF CG++GH SC + + A C CG+ H ++C S
Sbjct: 179 GEFPFAKCFVCGEMGHLS---RSC-----PDNPKGLYADGGGCKLCGSVEHLKKDCPES 229
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 33/89 (37%), Gaps = 14/89 (15%)
Query: 170 PRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRK------KPCFVCGSLEHGVRQC---- 219
P + D G CY CG H C++ V CFVCG + H R C
Sbjct: 144 PAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFVCGEMGHLSRSCPDNP 203
Query: 220 ----SKAQDCFICKKGGHRAKDCPDKHKS 244
+ C +C H KDCP+ S
Sbjct: 204 KGLYADGGGCKLCGSVEHLKKDCPESQNS 232
>gi|397503391|ref|XP_003822308.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 1
[Pan paniscus]
gi|397503393|ref|XP_003822309.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 2
[Pan paniscus]
gi|397503395|ref|XP_003822310.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 3
[Pan paniscus]
Length = 271
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C +A++ + C+ CGS EH + +C D CF+
Sbjct: 129 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 188
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
C + GH ++ CPD K + + C CG H C S + + + V
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPESQNSERMVTV 238
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C+K GH DCP ++ +C +CG + H++ C+ +L
Sbjct: 120 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 179
Query: 273 DLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+ +C++C GHL C N C CG + H
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEH 221
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 13/119 (10%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVP 298
K ++ +NA VC C GH + C + D+ CY C H C D
Sbjct: 119 KRQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPAL 178
Query: 299 GEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
GE CF CG++GH SC + + A C CG+ H ++C S
Sbjct: 179 GEFPFAKCFVCGEMGHLS---RSC-----PDNPKGLYADGGGCKLCGSVEHLKKDCPES 229
>gi|326417094|gb|ADZ73389.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ + ++ ++ R +GP+ F C+NCG EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSHAQHANVMMQRGNFKGPKRFK--------CFNCGREGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|32766020|gb|AAP69075.1| gag protein [Human immunodeficiency virus 1]
Length = 494
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 10/71 (14%)
Query: 160 NIVLRKL-LRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K +GPR C+NCG+EGH+A NCR+ RKK C+ CG H +++
Sbjct: 370 NIMMQKSNFKGPRRII-------KCFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKE 420
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 421 CTERQANFLGK 431
>gi|374350455|gb|AEZ35929.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 493
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 362 EAMSQVQHTNIMMQKGNFKGPRRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 411
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 412 GKEGHQMKDCTERQANFLGK 431
>gi|118426912|gb|ABK91207.1| gag protein [Human immunodeficiency virus 1]
Length = 152
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|118426824|gb|ABK91163.1| gag protein [Human immunodeficiency virus 1]
Length = 172
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|409181610|gb|AFV26831.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ S ++ R RG R C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 362 EAMSQVQQSSTMMQRGNFRGQRTIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 411
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 412 GKEGHQMKDCTERQANFL 429
>gi|374350353|gb|AEZ35861.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 493
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICK 229
C+NCG+EGH+A NCR+ RKK C+ CG H ++ C++ QD F+ K
Sbjct: 386 CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKDCNERQDNFLGK 430
>gi|226345482|gb|ACO49236.1| gag protein [Human immunodeficiency virus 1]
Length = 133
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ ++ ++ R RGPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 2 EAMSQTNSANIMMQRNNFRGPRKIV-------KCFNCGKEGHIAKNCRAP--RKKGCWKC 52
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 53 GQEGHQMKDCAERQANFLGK 72
>gi|55979892|gb|AAV69361.1| gag protein [Human immunodeficiency virus 1]
Length = 142
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|371559514|gb|AEX36692.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 415 GKEGHQMKDCTERQANFL 432
>gi|242029042|gb|ACS76551.1| gag protein [Human immunodeficiency virus 1]
Length = 361
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 253 EAMSQVNSTNVMMQRNNFKGPRKIV-------KCFNCGKEGHIARNCRAP--RKKGCWKC 303
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 304 GREGHQMKDCTERQANFLGK 323
>gi|112351478|gb|ABI15267.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 363 EAMSQVQNTNIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 412
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 413 GKEGHQMKDCTERQANFL 430
>gi|358056756|dbj|GAA97419.1| hypothetical protein E5Q_04097 [Mixia osmundae IAM 14324]
Length = 735
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 72/194 (37%), Gaps = 41/194 (21%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSL-EHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
C CGE+GH+A +C + C CG++ +H R C + C+ C GH C
Sbjct: 401 CGRCGEQGHIAKDC-----EHQQCMTCGAMDDHEFRDCPLLKVCWRCGNKGHTNGKC--- 452
Query: 242 HKSGFQNAQV----CLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAV 297
N V C +C GH +C I R + L + A
Sbjct: 453 ------NMPVASLRCPRCNQKGHASDNCPT-------------IWRVYPELPLERHTAAK 493
Query: 298 PGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKV 357
P C+ CG GH G + C RG V +S ++ + G + +R +
Sbjct: 494 PNPC-CYNCGHRGHFG-------EQCPEPRGHPVASSDTTIFTSG-QAPTSRRALPPGPA 544
Query: 358 RKRNIDASTPTFRP 371
R ++ T RP
Sbjct: 545 RMPHLVNGQRTARP 558
>gi|242029050|gb|ACS76555.1| gag protein [Human immunodeficiency virus 1]
Length = 361
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 253 EAMSQVNSTNIMMQRNNFKGPRKIV-------KCFNCGKEGHIARNCRAP--RKKGCWKC 303
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 304 GREGHQMKDCTERQANFLGK 323
>gi|148469916|gb|ABQ65903.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 363 EAMSQVQNTNIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 412
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 413 GKEGHQMKDCTERQANFL 430
>gi|332224854|ref|XP_003261583.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 1
[Nomascus leucogenys]
gi|332224856|ref|XP_003261584.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 2
[Nomascus leucogenys]
Length = 271
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C +A++ + C+ CGS EH + +C D CF+
Sbjct: 129 VCFHCRKAGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 188
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
C + GH ++ CPD K + + C CG H C S + + + V
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPESQNSERMVTV 238
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C+K GH DCP ++ +C +CG + H++ C+ +L
Sbjct: 120 RQAAKKNAMVCFHCRKAGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 179
Query: 273 DLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+ +C++C GHL C N C CG + H
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEH 221
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVP 298
K ++ +NA VC C +GH + C + D+ CY C H C D
Sbjct: 119 KRQAAKKNAMVCFHCRKAGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPAL 178
Query: 299 GEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
GE CF CG++GH SC + + A C CG+ H ++C S
Sbjct: 179 GEFPFAKCFVCGEMGHLS---RSC-----PDNPKGLYADGGGCKLCGSVEHLKKDCPES 229
>gi|148469876|gb|ABQ65867.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 363 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 412
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 413 GKEGHQMKDCTERQANFL 430
>gi|270015485|gb|EFA11933.1| hypothetical protein TcasGA2_TC001891 [Tribolium castaneum]
Length = 1184
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAK 236
CY C E GHMA C+ V R K C CG H V+ C K C +C GHRAK
Sbjct: 1112 CYRCWEPGHMAARCQ-GVDRSKLCHRCGEEGHSVKTCEKEMFCPVCGVRGHRAK 1164
>gi|242029054|gb|ACS76557.1| gag protein [Human immunodeficiency virus 1]
Length = 361
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 253 EAMSQVNSTNIMMQRNNFKGPRKIV-------KCFNCGKEGHIARNCRAP--RKKGCWKC 303
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 304 GREGHQMKDCTERQANFLGK 323
>gi|242029036|gb|ACS76548.1| gag protein [Human immunodeficiency virus 1]
Length = 361
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 253 EAMSQVNSTNIMMQRNNFKGPRKIV-------KCFNCGKEGHIARNCRAP--RKKGCWKC 303
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 304 GREGHQMKDCTERQANFLGK 323
>gi|259129283|gb|ACV95297.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ +V R RG + C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQQANIMVQRGNFRGQKRIK--------CFNCGKEGHLAKNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQIKDCTERQANFLGK 434
>gi|148469896|gb|ABQ65885.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 363 EAMSQVQNTNIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 412
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 413 GKEGHQMKDCTERQANFL 430
>gi|46243164|gb|AAS83690.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 11/71 (15%)
Query: 160 NIVLRKL-LRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K RGP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 371 NIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGQEGHQMKD 420
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 421 CTERQANFLGK 431
>gi|21595704|gb|AAH32736.1| ZCCHC9 protein [Homo sapiens]
Length = 271
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C +A++ + C+ CGS EH + +C D CF+
Sbjct: 129 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 188
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
C + GH ++ CPD K + + C CG H C S + + + V
Sbjct: 189 CGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPESQNSERMVTV 238
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C+K GH DCP ++ +C +CG + H++ C+ +L
Sbjct: 120 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 179
Query: 273 DLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+ +C++C GHL C N C CG + H
Sbjct: 180 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEH 221
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 33/89 (37%), Gaps = 14/89 (15%)
Query: 170 PRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRK------KPCFVCGSLEHGVRQC---- 219
P + D G CY CG H C++ V CFVCG + H R C
Sbjct: 144 PAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFVCGEMGHLSRSCPDNP 203
Query: 220 ----SKAQDCFICKKGGHRAKDCPDKHKS 244
+ C +C H KDCP+ S
Sbjct: 204 KGLYADGGGCKLCGSVEHLKKDCPESQNS 232
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 13/119 (10%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVP 298
K ++ +NA VC C GH + C + D+ CY C H C D
Sbjct: 119 KRQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPAL 178
Query: 299 GEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
GE CF CG++GH SC + + A C CG+ H ++C S
Sbjct: 179 GEFPFAKCFVCGEMGHLS---RSC-----PDNPKGLYADGGGCKLCGSVEHLKKDCPES 229
>gi|56609321|gb|AAW03274.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 363 EAMSQVQNTNIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 412
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 413 GKEGHQMKDCTERQANFL 430
>gi|156848103|ref|XP_001646934.1| hypothetical protein Kpol_2000p41 [Vanderwaltozyma polyspora DSM
70294]
gi|156117616|gb|EDO19076.1| hypothetical protein Kpol_2000p41 [Vanderwaltozyma polyspora DSM
70294]
Length = 158
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 72/184 (39%), Gaps = 41/184 (22%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKA-----QDCFICKKGGHRA 235
+ CY CG+ GH+A C S +K C+ C H +C+ A + C+ C + GH
Sbjct: 4 KACYICGKLGHLAEGCDS----EKLCYNCNQPGHVQSECTMARTVEHKQCYNCGETGHVK 59
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSC------RNSYSLDDLKEVQCYICRCFGHLC 289
+C Q C C +GH C R S S V CY C H+
Sbjct: 60 TEC---------TIQRCYNCNQTGHISRECPEPKKGRFSGSSKPNPRVACYNCGGPNHM- 109
Query: 290 CVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAR 349
D + C+ CG+ GH + C GE V CYNC GH +R
Sbjct: 110 ---AKDCLQTGSKCYSCGKFGHLS-------KDCPSGAGEKV------CYNCNQTGHISR 153
Query: 350 ECVS 353
EC S
Sbjct: 154 ECPS 157
>gi|118426896|gb|ABK91199.1| gag protein [Human immunodeficiency virus 1]
Length = 172
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|112351458|gb|ABI15249.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 11/71 (15%)
Query: 160 NIVLRKL-LRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K RGP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 372 NIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 421
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 422 CTERQANFLGK 432
>gi|55979884|gb|AAV69357.1| gag protein [Human immunodeficiency virus 1]
Length = 149
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|56609311|gb|AAW03265.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 363 EAMSQVQNTNIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 412
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 413 GKEGHQMKDCTERQANFL 430
>gi|409181520|gb|AFV26750.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQNTNIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 415 GKEGHQMKDCTERQANFL 432
>gi|326417020|gb|ADZ73354.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSHVQQANVMMQRGNFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|242029062|gb|ACS76561.1| gag protein [Human immunodeficiency virus 1]
Length = 361
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 253 EAMSQVNSTNIMMQRNNFKGPRKIV-------KCFNCGKEGHIARNCRAP--RKKGCWKC 303
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 304 GREGHQMKDCTERQANFLGK 323
>gi|242029058|gb|ACS76559.1| gag protein [Human immunodeficiency virus 1]
Length = 361
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 253 EAMSQVNSTNIMMQRNNFKGPRKIV-------KCFNCGKEGHIARNCRAP--RKKGCWKC 303
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 304 GREGHQMKDCTERQANFLGK 323
>gi|242029056|gb|ACS76558.1| gag protein [Human immunodeficiency virus 1]
Length = 361
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 253 EAMSQVNSTNIMMQRNNFKGPRKIV-------KCFNCGKEGHIARNCRAP--RKKGCWKC 303
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 304 GREGHQMKDCTERQANFLGK 323
>gi|242028355|gb|ACS76213.1| gag protein [Human immunodeficiency virus 1]
Length = 465
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICK 229
C+NCG+EGH+A NCR+ RKK C+ CG EH ++ C++ Q F+ K
Sbjct: 371 CFNCGKEGHIARNCRAP--RKKGCWKCGKEEHQMKDCTERQANFLGK 415
>gi|259125328|gb|ACV93726.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICK 229
C+NCG+EGH+A NCR+ RKK C+ CG EH ++ C++ Q F+ K
Sbjct: 392 CFNCGKEGHIARNCRAP--RKKGCWKCGREEHQMKDCTERQANFLGK 436
>gi|93210942|gb|ABF00892.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++++ ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 362 EAMSSINNTNIMMQRGNFKGPRRII-------KCFNCGKEGHLARNCRAP--RKKGCWKC 412
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 413 GKEGHQMKDCTERQANFLGK 432
>gi|55979894|gb|AAV69362.1| gag protein [Human immunodeficiency virus 1]
Length = 143
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|371559494|gb|AEX36674.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ + ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQNTSIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|242028231|gb|ACS76151.1| gag protein [Human immunodeficiency virus 1]
Length = 458
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 350 EAMSQVNNTNIMIQRSNFKGPRRI-------VKCFNCGKEGHIARNCRAP--RKKGCWKC 400
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 401 GKEGHQMKDCTERQANFLGK 420
>gi|209576191|gb|ACI64065.1| gag protein [Human immunodeficiency virus 1]
Length = 107
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 4 EAMSQVQSANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 53
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 54 GKEGHQMKDCTERQANFLGK 73
>gi|159125542|gb|EDP50659.1| zinc knuckle transcription factor (CnjB), putative [Aspergillus
fumigatus A1163]
Length = 509
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 13/100 (13%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ----DCFICKKGGHRAKDC 238
C NCG +GH A C A ++ CF CG +C+K + C IC K GH A +C
Sbjct: 73 CRNCGGDGHFAREC-PAPRKGMACFNCGEEGRSKAECTKPRVFKGPCRICSKEGHPAAEC 131
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNS--YSLDDLKE 276
PD+ VC C GH C + + L+D+ +
Sbjct: 132 PDRP------PDVCKNCQSEGHKTIECTENRKFDLNDIPD 165
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 59/150 (39%), Gaps = 32/150 (21%)
Query: 252 CLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGE-------- 300
C CG+ GH C+ +L D EV+C C GH C D P
Sbjct: 287 CGNCGEMGHTARGCKEERALVDRVEVKCVNCNASGHRARDCTEPRVDRSPEHKAADCPNP 346
Query: 301 -----VSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC---V 352
V C RC ++GH C QA +P +C NCG+E H AR+C
Sbjct: 347 RSAEGVECKRCNEMGHFA---KDCHQA----------PAPRTCRNCGSEDHMARDCDKPR 393
Query: 353 SSSKVRKRNIDASTPTFRPHRENKDHSGIK 382
+S V RN + R + KD S +K
Sbjct: 394 DASIVTCRNCEEVGHFSRDCPQKKDWSKVK 423
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 67/181 (37%), Gaps = 50/181 (27%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNC---RSAVKR-KKPCFVCGSLEHGVRQCSKAQDCFICKK 230
P D+ C NCGE GH A C R+ V R + C C + H R C++ + + +
Sbjct: 279 PYDKQIPKCGNCGEMGHTARGCKEERALVDRVEVKCVNCNASGHRARDCTEPR---VDRS 335
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCC 290
H+A DCP+ + C +C + GH C +
Sbjct: 336 PEHKAADCPNPRSA---EGVECKRCNEMGHFAKDCHQA---------------------- 370
Query: 291 VNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARE 350
P +C CG H AR + +AS +C NC GHF+R+
Sbjct: 371 -------PAPRTCRNCGSEDHM-----------ARDCDKPRDASIVTCRNCEEVGHFSRD 412
Query: 351 C 351
C
Sbjct: 413 C 413
>gi|18699114|gb|AAL78393.1|AF413968_1 gag protein [Human immunodeficiency virus 1]
Length = 219
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 86 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 135
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 136 GKEGHQMKNCTERQANFL 153
>gi|56609241|gb|AAW03202.1| gag protein [Human immunodeficiency virus 1]
gi|56609291|gb|AAW03247.1| gag protein [Human immunodeficiency virus 1]
gi|56609327|gb|AAW03279.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 363 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 412
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 413 GKEGHQMKDCTERQANFL 430
>gi|56609261|gb|AAW03220.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 363 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 412
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 413 GKEGHQMKDCTERQANFL 430
>gi|388851384|emb|CCF54969.1| related to GIS2-Putative zinc finger protein, proposed to be
involved in the RAS/cAMP signaling pathway [Ustilago
hordei]
Length = 182
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 70/175 (40%), Gaps = 27/175 (15%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC---SKAQDCFICKKGGHRAKD 237
+TC+NCG+ GH A C +A C+ CG H QC ++ + C+ C + GH ++D
Sbjct: 5 RTCFNCGQPGHNAAACPTAGNPS--CYNCGQQGHISSQCGMEAQPKTCYKCNETGHISRD 62
Query: 238 CP-DKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDA 296
CP + + C +CG GH +C ++ S
Sbjct: 63 CPTNPAPAAGGPGGECYRCGQHGHIARACPDAGSSSRGG------------------FGG 104
Query: 297 VPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
G SC+ CG +GH C G A CYNC GH +REC
Sbjct: 105 ARGGRSCYNCGGVGHLS---RDCTSPAGAGAGAGAGAGGQRCYNCNESGHISREC 156
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 61/156 (39%), Gaps = 24/156 (15%)
Query: 176 PDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC---------SKAQDCF 226
P G +CYNCG++GH++ C + K C+ C H R C +C+
Sbjct: 21 PTAGNPSCYNCGQQGHISSQCGMEAQPKT-CYKCNETGHISRDCPTNPAPAAGGPGGECY 79
Query: 227 ICKKGGHRAKDCPDKHKSGFQNAQV------CLKCGDSGHDMFSCRNSYSLDDLKEV--- 277
C + GH A+ CPD S C CG GH C +
Sbjct: 80 RCGQHGHIARACPDAGSSSRGGFGGARGGRSCYNCGGVGHLSRDCTSPAGAGAGAGAGAG 139
Query: 278 --QCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGH 311
+CY C GH ++ P SC+RCG+ GH
Sbjct: 140 GQRCYNCNESGH---ISRECPKPQTKSCYRCGEEGH 172
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 54/138 (39%), Gaps = 27/138 (19%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
CF C + GH A CP C CG GH C + + CY C
Sbjct: 7 CFNCGQPGHNAAACPTAGNPS------CYNCGQQGHISSQCG-----MEAQPKTCYKCNE 55
Query: 285 FGHL---CCVNISDAVPGEVS-CFRCGQLGHTGLHWNSCMQAC-----ARSRGETVEASP 335
GH+ C N + A G C+RCGQ GH +AC + G
Sbjct: 56 TGHISRDCPTNPAPAAGGPGGECYRCGQHGHI-------ARACPDAGSSSRGGFGGARGG 108
Query: 336 SSCYNCGAEGHFARECVS 353
SCYNCG GH +R+C S
Sbjct: 109 RSCYNCGGVGHLSRDCTS 126
>gi|118426796|gb|ABK91149.1| gag protein [Human immunodeficiency virus 1]
Length = 153
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 20 EAMSQVQNTNIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 69
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 70 GKEGHQMKDCTERQANFL 87
>gi|242029064|gb|ACS76562.1| gag protein [Human immunodeficiency virus 1]
Length = 361
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 253 EAMSQVNSTNIMMQRNNFKGPRKIV-------KCFNCGKEGHIARNCRAP--RKKGCWKC 303
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 304 GREGHQMKDCTERQANFLGK 323
>gi|213137875|gb|ACJ44614.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 10/73 (13%)
Query: 158 SDNIVL-RKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGV 216
S NI++ R RGPR C+NCG+EGH+A NCR+ RKK C+ CG H +
Sbjct: 369 SANIMMQRNNFRGPRRIV-------KCFNCGKEGHIAKNCRAP--RKKGCWKCGKEGHHM 419
Query: 217 RQCSKAQDCFICK 229
+ C++ Q F+ K
Sbjct: 420 KDCTERQANFLGK 432
>gi|118426814|gb|ABK91158.1| gag protein [Human immunodeficiency virus 1]
Length = 152
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 69 GKEGHQMKDCTERQANFL 86
>gi|3132801|gb|AAC29068.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ S+ ++ R RG R C+NCG+EGH+A NC++ RKK C+ C
Sbjct: 362 EAMSQVQQSNIMMQRGNFRGQRTIK--------CFNCGKEGHLARNCKAP--RKKGCWKC 411
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 412 GKEGHQMKDCTEGQANFLGK 431
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C G GH A A+ + + + ++ G + + CF C K GH A++C
Sbjct: 347 CQGVGGPGHKARVLAEAMSQVQQSNIM--MQRGNFRGQRTIKCFNCGKEGHLARNCKAPR 404
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 405 KKG------CWKCGKEGHQMKDC 421
>gi|378734858|gb|EHY61317.1| cellular nucleic acid-binding protein [Exophiala dermatitidis
NIH/UT8656]
Length = 182
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 67/171 (39%), Gaps = 45/171 (26%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC-------------- 219
D P +G TCYNCG EGH++ C +A + K C+ CG+ H R C
Sbjct: 17 DCPKKGTPTCYNCGAEGHVSREC-TAAPKPKSCYKCGNEGHLARDCQAAPAGGAGGGWGN 75
Query: 220 --------SKAQDCFICKKGGHRAKDCP-------DKHKSGFQNAQVCLKCGDSGHDMFS 264
A++C+ C GH A+DC S Q C CG GH
Sbjct: 76 VGGNAYGGGSARECYRCGGQGHIARDCTSGGQGGYGGGYSRGGGGQTCYSCGGVGHMSRD 135
Query: 265 CRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVS----CFRCGQLGH 311
C + +CY C GHL S P E S C++C Q GH
Sbjct: 136 CTQG------RAQKCYNCGEQGHL-----SRDCPSEASSERICYKCKQPGH 175
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 73/191 (38%), Gaps = 52/191 (27%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP-CFVCGSLEHGVRQCSKA---QDCFICKKGGHRAKDC 238
CYNCG+ H A +C K+ P C+ CG+ H R+C+ A + C+ C GH A+DC
Sbjct: 5 CYNCGDSSHQARDC---PKKGTPTCYNCGAEGHVSRECTAAPKPKSCYKCGNEGHLARDC 61
Query: 239 PDKHKS--------------GFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
G +A+ C +CG GH C +
Sbjct: 62 QAAPAGGAGGGWGNVGGNAYGGGSARECYRCGGQGHIARDCTSGGQGGYGGG-------- 113
Query: 285 FGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAE 344
G +C+ CG +GH SR + + CYNCG +
Sbjct: 114 ---------YSRGGGGQTCYSCGGVGHM-------------SR-DCTQGRAQKCYNCGEQ 150
Query: 345 GHFARECVSSS 355
GH +R+C S +
Sbjct: 151 GHLSRDCPSEA 161
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 183 CYNCGEEGHMAVNC-----------RSAVKRKKPCFVCGSLEHGVRQCS--KAQDCFICK 229
CY CG +GH+A +C S + C+ CG + H R C+ +AQ C+ C
Sbjct: 89 CYRCGGQGHIARDCTSGGQGGYGGGYSRGGGGQTCYSCGGVGHMSRDCTQGRAQKCYNCG 148
Query: 230 KGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRN 267
+ GH ++DCP + S ++C KC GH +C N
Sbjct: 149 EQGHLSRDCPSEASS----ERICYKCKQPGHLQSACPN 182
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC----SKAQDCFICKKGGHRAKD 237
TCY+CG GHM+ +C R + C+ CG H R C S + C+ CK+ GH
Sbjct: 122 TCYSCGGVGHMSRDCTQG--RAQKCYNCGEQGHLSRDCPSEASSERICYKCKQPGHLQSA 179
Query: 238 CPD 240
CP+
Sbjct: 180 CPN 182
>gi|346318384|gb|EGX87987.1| zinc knuckle transcription factor (CnjB), putative [Cordyceps
militaris CM01]
Length = 487
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 81/222 (36%), Gaps = 69/222 (31%)
Query: 177 DRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAK 236
D G C NC E GH+A C E VR+ K Q C+ C GHR +
Sbjct: 250 DSGRPKCSNCDELGHIAKQC--------------PQEKVVRE-VKVQTCYNCSGEGHRVR 294
Query: 237 DCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDA 296
DCP+ K F C + G+ S R+ Y D VN+ D+
Sbjct: 295 DCPEPRKDRF-------ACRNCGYVNMSPRSPYLFID-----------------VNVGDS 330
Query: 297 VPG-------------EVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGA 343
G V+C +C + GH C + AR C NCG
Sbjct: 331 KSGHRATDCEEEPNLDNVTCRKCEETGHFA---KDCPKGGAR-----------GCRNCGQ 376
Query: 344 EGHFAREC---VSSSKVRKRNIDASTPTFRPHRENKDHSGIK 382
EGHFA +C + V RN + + R E KD S +K
Sbjct: 377 EGHFAADCDQPPNLDNVVCRNCEKNGHFSRDCPEPKDWSKVK 418
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 61/159 (38%), Gaps = 38/159 (23%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLE--------------------HGVRQCS 220
QTCYNC EGH +C K + C CG + H C
Sbjct: 281 QTCYNCSGEGHRVRDCPEPRKDRFACRNCGYVNMSPRSPYLFIDVNVGDSKSGHRATDCE 340
Query: 221 KAQD-----CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLK 275
+ + C C++ GH AKDCP K G A+ C CG GH C +LD+
Sbjct: 341 EEPNLDNVTCRKCEETGHFAKDCP---KGG---ARGCRNCGQEGHFAADCDQPPNLDN-- 392
Query: 276 EVQCYICRCFGHLC--CVNISDAVPGEVSCFRCGQLGHT 312
V C C GH C D +V C C + GHT
Sbjct: 393 -VVCRNCEKNGHFSRDCPEPKDW--SKVKCSNCQEFGHT 428
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 36/90 (40%), Gaps = 27/90 (30%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C++CGEEGH C +A + C CK+ GH AK+CP K
Sbjct: 65 CFSCGEEGHRKFECPNAPQMT---------------------CNYCKEPGHMAKECPTKP 103
Query: 243 KSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
A C CG+ GH C N +D
Sbjct: 104 ------AMSCNNCGEEGHMSKDCTNPRKID 127
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 298 PGEVSCFRCGQLGHTGLHW-NSCMQAC--ARSRGETVEASPS----SCYNCGAEGHFARE 350
PG+ CF CG+ GH N+ C + G + P+ SC NCG EGH +++
Sbjct: 60 PGDNKCFSCGEEGHRKFECPNAPQMTCNYCKEPGHMAKECPTKPAMSCNNCGEEGHMSKD 119
Query: 351 CVSSSKVRKRNI 362
C + K+ + +
Sbjct: 120 CTNPRKIDRSGV 131
>gi|242029052|gb|ACS76556.1| gag protein [Human immunodeficiency virus 1]
Length = 361
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 253 EAMSQVNSTNIMMQRNNFKGPRKIV-------KCFNCGKEGHIARNCRAP--RKKGCWKC 303
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 304 GREGHQMKDCTERQANFLGK 323
>gi|118426950|gb|ABK91226.1| gag protein [Human immunodeficiency virus 1]
Length = 151
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 69 GKEGHQMKDCTERQANFL 86
>gi|449681909|ref|XP_002167841.2| PREDICTED: uncharacterized protein LOC100198974, partial [Hydra
magnipapillata]
Length = 706
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 171 RYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKK 230
RY+ CYNC E GH+ +C S K+ C++CG H +C C+ C
Sbjct: 64 RYYVTSSLPNIFCYNCDERGHLMRDC-SKPKKIPTCYLCGG-NHARHKCINDL-CYNCMN 120
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
GH +KDC + S +Q Q CL+C GH +C
Sbjct: 121 PGHISKDCKEPRLS-YQ--QTCLRCNFQGHTKKNC 152
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 54/140 (38%), Gaps = 31/140 (22%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRC 284
C+ C + GH +DC K C CG H C ++DL CY C
Sbjct: 76 CYNCDERGHLMRDCSKPKK-----IPTCYLCG-GNHARHKC-----INDL----CYNCMN 120
Query: 285 FGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVE----ASPSS--- 337
GH+ + + +C RC GHT +C + R TVE P+
Sbjct: 121 PGHISKDCKEPRLSYQQTCLRCNFQGHTK---KNCPEI-WRQYHLTVEDGKIVKPNKYKT 176
Query: 338 -----CYNCGAEGHFARECV 352
CYNC ++ HF +C+
Sbjct: 177 NKTRYCYNCASKKHFGEDCL 196
>gi|440635159|gb|ELR05078.1| hypothetical protein GMDG_07120 [Geomyces destructans 20631-21]
Length = 212
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 66/193 (34%), Gaps = 68/193 (35%)
Query: 174 DPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK------------ 221
D P RG CYNCG EGHM+ C K K C+ CG H R C+
Sbjct: 25 DCPTRGPAKCYNCGGEGHMSRECPEGPKDKT-CYKCGQPGHISRDCANPAAEGMGAGRSF 83
Query: 222 ----AQDCFICKKGGHRAKDCPD----------------------------------KHK 243
Q+C+ C K GH A++CP+
Sbjct: 84 GGGAGQECYKCSKVGHIARNCPEAGAGGYQNAGYGGGGGGYGGGGAGYGGGGAGYGGGAG 143
Query: 244 SGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVS- 302
Q C CG GH S D + +CY C GHL S P E S
Sbjct: 144 GYGGRQQTCYSCGGVGH--------MSRDCTQGQKCYNCGQTGHL-----SRDCPSETSA 190
Query: 303 ---CFRCGQLGHT 312
C++C Q GH
Sbjct: 191 ERTCYKCRQPGHV 203
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 202 RKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHD 261
R++ C+ CG + H R C++ Q C+ C + GH ++DCP + + + C KC GH
Sbjct: 148 RQQTCYSCGGVGHMSRDCTQGQKCYNCGQTGHLSRDCPSETSA----ERTCYKCRQPGHV 203
Query: 262 MFSC 265
C
Sbjct: 204 QAQC 207
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 14/105 (13%)
Query: 172 YFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC---SKAQDCFIC 228
Y + P + + CYNCG++ H A +C + K C+ CG H R+C K + C+ C
Sbjct: 3 YGEAPQQ-QRGCYNCGDQSHQARDCPTRGPAK--CYNCGGEGHMSRECPEGPKDKTCYKC 59
Query: 229 KKGGHRAKDCPDKHKSGF--------QNAQVCLKCGDSGHDMFSC 265
+ GH ++DC + G Q C KC GH +C
Sbjct: 60 GQPGHISRDCANPAAEGMGAGRSFGGGAGQECYKCSKVGHIARNC 104
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC----SKAQDCFICKKGGHRAK 236
QTCY+CG GHM+ +C K C+ CG H R C S + C+ C++ GH
Sbjct: 150 QTCYSCGGVGHMSRDCTQGQK----CYNCGQTGHLSRDCPSETSAERTCYKCRQPGHVQA 205
Query: 237 DCPD 240
CP+
Sbjct: 206 QCPE 209
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 71/217 (32%), Gaps = 70/217 (32%)
Query: 199 AVKRKKPCFVCGSLEHGVRQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCG 256
A ++++ C+ CG H R C C+ C GH +++CP+ K + C KCG
Sbjct: 6 APQQQRGCYNCGDQSHQARDCPTRGPAKCYNCGGEGHMSRECPEGPKD-----KTCYKCG 60
Query: 257 DSGHDMFSCRNSY--------SLDDLKEVQCYICRCFGHLCCVNISDAVPG--------- 299
GH C N S +CY C GH+ N +A G
Sbjct: 61 QPGHISRDCANPAAEGMGAGRSFGGGAGQECYKCSKVGHI-ARNCPEAGAGGYQNAGYGG 119
Query: 300 -----------------------------EVSCFRCGQLGHTGLHWNSCMQACARSRGET 330
+ +C+ CG +GH C Q
Sbjct: 120 GGGGYGGGGAGYGGGGAGYGGGAGGYGGRQQTCYSCGGVGHM---SRDCTQG-------- 168
Query: 331 VEASPSSCYNCGAEGHFARECVSSSKVRKRNIDASTP 367
CYNCG GH +R+C S + + P
Sbjct: 169 -----QKCYNCGQTGHLSRDCPSETSAERTCYKCRQP 200
>gi|242029060|gb|ACS76560.1| gag protein [Human immunodeficiency virus 1]
Length = 361
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 253 EAMSQVNSTNIMMQRNNFKGPRKIV-------KCFNCGKEGHIARNCRAP--RKKGCWKC 303
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 304 GREGHQMKDCTERQANFLGK 323
>gi|209576161|gb|ACI64050.1| gag protein [Human immunodeficiency virus 1]
Length = 107
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 4 EAMSQVQSANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 53
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 54 GKEGHQMKDCTERQANFLGK 73
>gi|6651471|gb|AAF22319.1|AF193276_1 gag polyprotein [HIV-1 CRF03_AB]
Length = 498
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 415 GKEGHQMKDCTERQANFL 432
>gi|300720012|gb|ADK32980.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 362 EAMSQVNSTNIMMQRSNFKGPRKI-------VKCFNCGKEGHIARNCRAP--RKKGCWKC 412
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 413 GKEGHQMKDCTERQANFLGK 432
>gi|70993356|ref|XP_751525.1| zinc knuckle transcription factor (CnjB) [Aspergillus fumigatus
Af293]
gi|66849159|gb|EAL89487.1| zinc knuckle transcription factor (CnjB), putative [Aspergillus
fumigatus Af293]
Length = 509
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 13/100 (13%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ----DCFICKKGGHRAKDC 238
C NCG +GH A C A ++ CF CG +C+K + C IC K GH A +C
Sbjct: 73 CRNCGGDGHFAREC-PAPRKGMACFNCGEEGRSKAECTKPRVFKGPCRICSKEGHPAAEC 131
Query: 239 PDKHKSGFQNAQVCLKCGDSGHDMFSCRNS--YSLDDLKE 276
PD+ VC C GH C + + L+D+ +
Sbjct: 132 PDRP------PDVCKNCQSEGHKTIECTENRKFDLNDIPD 165
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 59/150 (39%), Gaps = 32/150 (21%)
Query: 252 CLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL---CCVNISDAVPGE-------- 300
C CG+ GH C+ +L D EV+C C GH C D P
Sbjct: 287 CGNCGEMGHTARGCKEERALVDRVEVKCVNCNASGHRARDCTEPRVDRSPEHKAADCPNP 346
Query: 301 -----VSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC---V 352
V C RC ++GH C QA +P +C NCG+E H AR+C
Sbjct: 347 RSAEGVECKRCNEMGHFA---KDCHQA----------PAPRTCRNCGSEDHMARDCDKPR 393
Query: 353 SSSKVRKRNIDASTPTFRPHRENKDHSGIK 382
+S V RN + R + KD S +K
Sbjct: 394 DASIVTCRNCEEVGHFSRDCPQKKDWSKVK 423
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 67/181 (37%), Gaps = 50/181 (27%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNC---RSAVKR-KKPCFVCGSLEHGVRQCSKAQDCFICKK 230
P D+ C NCGE GH A C R+ V R + C C + H R C++ + + +
Sbjct: 279 PYDKQIPKCGNCGEMGHTARGCKEERALVDRVEVKCVNCNASGHRARDCTEPR---VDRS 335
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCC 290
H+A DCP+ + C +C + GH C +
Sbjct: 336 PEHKAADCPNPRSA---EGVECKRCNEMGHFAKDCHQA---------------------- 370
Query: 291 VNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARE 350
P +C CG H AR + +AS +C NC GHF+R+
Sbjct: 371 -------PAPRTCRNCGSEDHM-----------ARDCDKPRDASIVTCRNCEEVGHFSRD 412
Query: 351 C 351
C
Sbjct: 413 C 413
>gi|55979904|gb|AAV69367.1| gag protein [Human immunodeficiency virus 1]
Length = 128
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|56609301|gb|AAW03256.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 363 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 412
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 413 GKEGHQMKDCTERQANFL 430
>gi|56609271|gb|AAW03229.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 363 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 412
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 413 GKEGHQMKDCTERQANFL 430
>gi|371559474|gb|AEX36656.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQNTNIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 415 GREGHQMKDCTERQANFL 432
>gi|328785464|ref|XP_001121478.2| PREDICTED: hypothetical protein LOC725656 [Apis mellifera]
Length = 437
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQ--VCLKCGDSGHDMFSCRNSYSLDDLKEVQCYIC 282
CF C+K GH DCP+ G + A +C KCG + H F C+ + + + C+IC
Sbjct: 315 CFHCRKAGHNLSDCPE---LGSEQAGTGICYKCGSTEHTHFECKVTKPT-EYRYATCFIC 370
Query: 283 RCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
R GH+ C N P +C CG + H
Sbjct: 371 REQGHISKQCPDNPKGIYPQGGACKICGDVTH 402
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 10/89 (11%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKK---PCFVCGSLEHGVRQCS-------KAQDCFICKKG 231
C++C + GH +C + C+ CGS EH +C + CFIC++
Sbjct: 314 VCFHCRKAGHNLSDCPELGSEQAGTGICYKCGSTEHTHFECKVTKPTEYRYATCFICREQ 373
Query: 232 GHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
GH +K CPD K + C CGD H
Sbjct: 374 GHISKQCPDNPKGIYPQGGACKICGDVTH 402
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 30/81 (37%), Gaps = 11/81 (13%)
Query: 179 GWQTCYNCGEEGHMAVNCRSAVK---RKKPCFVCGSLEHGVRQCS--------KAQDCFI 227
G CY CG H C+ R CF+C H +QC + C I
Sbjct: 337 GTGICYKCGSTEHTHFECKVTKPTEYRYATCFICREQGHISKQCPDNPKGIYPQGGACKI 396
Query: 228 CKKGGHRAKDCPDKHKSGFQN 248
C H KDCPD K QN
Sbjct: 397 CGDVTHLKKDCPDLIKEKEQN 417
>gi|41353552|gb|AAS01339.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQNANIMMQKSSFRGPKRIK--------CFNCGREGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 415 GKEGHQMKDCTERQANFL 432
>gi|339786812|gb|AEK11572.1| gag protein [Human immunodeficiency virus 1]
gi|402229547|gb|AFQ36642.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 491
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 9/72 (12%)
Query: 158 SDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVR 217
S+ ++ R L+GPR C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 369 SNILMQRSNLKGPRKIV-------KCFNCGKEGHIARNCRAP--RKKGCWKCGKEGHQMK 419
Query: 218 QCSKAQDCFICK 229
C++ Q F+ K
Sbjct: 420 DCTERQANFLGK 431
>gi|320410166|gb|ADW26871.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 8/80 (10%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V S NI+++ RG F P R C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVTNSANIMMQ---RG--NFRP-QRKXVKCFNCGKEGHIAKNCRAP--RKKGCWKC 416
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 417 GKEGHQIKDCTERQANFLGK 436
>gi|296194212|ref|XP_002744881.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 2
[Callithrix jacchus]
Length = 271
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 14/111 (12%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CF 226
C++C + GH +C +A++ + C+ CGS EH + +C D CF
Sbjct: 128 MVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCF 187
Query: 227 ICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
+C + GH ++ CPD K + + C CG H C + + D + V
Sbjct: 188 VCGEMGHLSRACPDNPKGLYADGGGCKLCGSVEHLKKDCPENQNSDRMVTV 238
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C+K GH DCP ++ +C +CG + H++ C+ +L
Sbjct: 120 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 179
Query: 273 DLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+ +C++C GHL C N C CG + H
Sbjct: 180 EFPFAKCFVCGEMGHLSRACPDNPKGLYADGGGCKLCGSVEH 221
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 46/116 (39%), Gaps = 13/116 (11%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVP 298
K ++ +NA VC C GH + C + D+ CY C H C D
Sbjct: 119 KRQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPAL 178
Query: 299 GEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
GE CF CG++GH +AC + + A C CG+ H ++C
Sbjct: 179 GEFPFAKCFVCGEMGHLS-------RACP-DNPKGLYADGGGCKLCGSVEHLKKDC 226
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 33/89 (37%), Gaps = 14/89 (15%)
Query: 170 PRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRK------KPCFVCGSLEHGVRQC---- 219
P + D G CY CG H C++ V CFVCG + H R C
Sbjct: 144 PAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFVCGEMGHLSRACPDNP 203
Query: 220 ----SKAQDCFICKKGGHRAKDCPDKHKS 244
+ C +C H KDCP+ S
Sbjct: 204 KGLYADGGGCKLCGSVEHLKKDCPENQNS 232
>gi|242029046|gb|ACS76553.1| gag protein [Human immunodeficiency virus 1]
Length = 361
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 253 EAMSQVNSTNIMMQRNNFKGPRKIV-------KCFNCGKEGHIARNCRAP--RKKGCWKC 303
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 304 GREGHQMKDCTERQANFLGK 323
>gi|149408507|ref|XP_001509827.1| PREDICTED: zinc finger CCHC domain-containing protein 9-like
[Ornithorhynchus anatinus]
Length = 270
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 222 AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLDDLKEVQC 279
A CF C+K GH DCP +S +C +CG + H++ CR +L + +C
Sbjct: 126 AMVCFHCRKPGHGLADCPAVLESQDMGTGICYRCGSTEHEINKCRAKIDPALGEFSFAKC 185
Query: 280 YICRCFGHL--CCVNISDAVPGEVSCFR-CGQLGH 311
+IC GHL C + + E C R CG + H
Sbjct: 186 FICGEMGHLSRSCPDNPKGLYAEGGCCRLCGSVEH 220
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 14/93 (15%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C + ++ + C+ CGS EH + +C D CFI
Sbjct: 128 VCFHCRKPGHGLADCPAVLESQDMGTGICYRCGSTEHEINKCRAKIDPALGEFSFAKCFI 187
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
C + GH ++ CPD K + C CG H
Sbjct: 188 CGEMGHLSRSCPDNPKGLYAEGGCCRLCGSVEH 220
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 13/110 (11%)
Query: 247 QNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVPGEVS-- 302
+NA VC C GH + C D+ CY C H C D GE S
Sbjct: 124 KNAMVCFHCRKPGHGLADCPAVLESQDMGTGICYRCGSTEHEINKCRAKIDPALGEFSFA 183
Query: 303 -CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFAREC 351
CF CG++GH ++C + + A C CG+ HF ++C
Sbjct: 184 KCFICGEMGHLS-------RSCP-DNPKGLYAEGGCCRLCGSVEHFKKDC 225
>gi|55979939|gb|AAV69382.1| gag protein [Human immunodeficiency virus 1]
Length = 127
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|242029034|gb|ACS76547.1| gag protein [Human immunodeficiency virus 1]
Length = 361
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 253 EAMSQVNSTNIMMQRNNFKGPRKIV-------KCFNCGKEGHIARNCRAP--RKKGCWKC 303
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 304 GREGHQMKDCTERQANFLGK 323
>gi|255739665|gb|ACU31770.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V + ++ R RGPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 362 EAMSQVNNTSIMMQRGNFRGPRRI-------VKCFNCGKEGHIAKNCRAP--RKKGCWKC 412
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 413 GKEGHLMKDCTEKQANFLGK 432
>gi|195954537|gb|ACG58961.1| gag protein [Human immunodeficiency virus 1]
gi|238734305|gb|ACR55525.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQNTNIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 415 GKEGHQMKDCTERQANFL 432
>gi|55979896|gb|AAV69363.1| gag protein [Human immunodeficiency virus 1]
Length = 144
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|334884539|gb|AEH21380.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 498
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSHVQQTNVMMQRGNFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|300720165|gb|ADK33082.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 10/73 (13%)
Query: 158 SDNIVLRKL-LRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGV 216
S NI+++K +GPR C+NCG+EGH+A NCR+ RKK C+ CG H +
Sbjct: 369 STNIMMQKSNFKGPRRIV-------KCFNCGKEGHIARNCRAP--RKKGCWKCGKEGHQM 419
Query: 217 RQCSKAQDCFICK 229
+ C++ Q F+ K
Sbjct: 420 KDCTERQANFLGK 432
>gi|242029032|gb|ACS76546.1| gag protein [Human immunodeficiency virus 1]
Length = 361
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 253 EAMSQVNSTNIMMQRNNFKGPRKIV-------KCFNCGKEGHIARNCRAP--RKKGCWKC 303
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 304 GREGHQMKDCTERQANFLGK 323
>gi|409181530|gb|AFV26759.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 11/71 (15%)
Query: 160 NIVLRKL-LRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K RGP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
>gi|209882005|ref|XP_002142440.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209558046|gb|EEA08091.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 250
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 64/164 (39%), Gaps = 47/164 (28%)
Query: 213 EHGV-----RQCSKAQDCFICKKGGHRAKDC----------PDKHKSGFQNAQV--CLKC 255
+HGV R C++ C C+K GH DC + K+ N Q+ C C
Sbjct: 90 KHGVLAKQDRNCNRNLVCLCCRKKGHMMADCRKYKDNNLDRESESKTLPNNKQLHKCFNC 149
Query: 256 GDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLH 315
G+ GH + C+ S I D+V SCF+CG+ GH
Sbjct: 150 GEEGHTLRDCKKS-----------------------RIDDSVLPFASCFKCGEYGHI--- 183
Query: 316 WNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSSKVRK 359
+ C+++ +V SC CG+ H A+ C K +K
Sbjct: 184 ----VAYCSQNDIGSVYPKGGSCNICGSVKHLAKNCDKGKKPKK 223
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 14/78 (17%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCRS-----AVKRKKPCFVCGSLEHGVRQCS--------- 220
P ++ C+NCGEEGH +C+ +V CF CG H V CS
Sbjct: 138 PNNKQLHKCFNCGEEGHTLRDCKKSRIDDSVLPFASCFKCGEYGHIVAYCSQNDIGSVYP 197
Query: 221 KAQDCFICKKGGHRAKDC 238
K C IC H AK+C
Sbjct: 198 KGGSCNICGSVKHLAKNC 215
>gi|206129499|gb|ACI05350.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICK 229
C+NCG+EGH+A NCR+ RKK C+ CG H +R C++ Q F+ K
Sbjct: 387 CFNCGKEGHLAKNCRAP--RKKGCWKCGREGHQMRDCTEGQANFLGK 431
>gi|118426790|gb|ABK91146.1| gag protein [Human immunodeficiency virus 1]
Length = 151
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 18 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 67
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 68 GKEGHQMKDCTERQANFL 85
>gi|55979888|gb|AAV69359.1| gag protein [Human immunodeficiency virus 1]
Length = 147
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 20 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 69
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 70 GKEGHQMKDCTERQANFLGK 89
>gi|371559524|gb|AEX36701.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ + ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQNTXIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|320032219|gb|EFW14174.1| zinc knuckle transcription factor [Coccidioides posadasii str.
Silveira]
Length = 453
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 39/95 (41%), Gaps = 10/95 (10%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ----DCFICKKGGHRAKD 237
C+NCG+ GH + C K CF CG H +C + C IC+ GH A +
Sbjct: 51 ACHNCGQPGHFSRECPEPRKASGACFNCGEEGHNKAECPNPRVFKGTCRICQAEGHPAFE 110
Query: 238 CPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
CPDK VC C GH C + D
Sbjct: 111 CPDK------GPDVCKNCKGEGHKTKDCTENRKFD 139
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 11/143 (7%)
Query: 175 PPDRGWQTCYNCGEEGHMAVNCR---SAVKR-KKPCFVCGSLEHGVRQCSKAQ-DCFICK 229
P DR C NCGE GH C+ + V+R C +C + H R C + + D C+
Sbjct: 256 PMDRQVPKCDNCGEMGHTRRGCKQEPATVERVGVKCVICKEIGHRARDCIQPRIDKSGCR 315
Query: 230 KGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC 289
GH AK CP+ + + C + + GH C ++D+ V C C GH+
Sbjct: 316 NCGH-AKQCPEPRSAEGVECKKCQQ--EEGHMSKECDKPRNMDN---VTCRNCEKTGHMS 369
Query: 290 CVNISDAVPGEVSCFRCGQLGHT 312
+ +V C C ++GHT
Sbjct: 370 RDCPEEKDWSKVQCTNCKEMGHT 392
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 176 PDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCS-KAQD-CFICKKGGH 233
P + C+NCGEEGH C + K C +C + H +C K D C CK GH
Sbjct: 68 PRKASGACFNCGEEGHNKAECPNPRVFKGTCRICQAEGHPAFECPDKGPDVCKNCKGEGH 127
Query: 234 RAKDCPDKHK 243
+ KDC + K
Sbjct: 128 KTKDCTENRK 137
>gi|255739379|gb|ACU31627.1| gag protein [Human immunodeficiency virus 1]
Length = 493
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 10/73 (13%)
Query: 158 SDNIVL-RKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGV 216
S NI++ R +GPR C+NCG+EGH+A NCR+ RKK C+ CG H +
Sbjct: 369 SKNIMMQRSNFKGPRKII-------KCFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQM 419
Query: 217 RQCSKAQDCFICK 229
+ C++ Q F+ K
Sbjct: 420 KDCTERQANFLGK 432
>gi|226345098|gb|ACO49049.1| gag protein [Human immunodeficiency virus 1]
Length = 132
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 2 EAMSPVNSTNIMMQRSNFKGPRRII-------KCFNCGKEGHIAKNCRAP--RKKGCWKC 52
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 53 GREGHQMKDCTERQANFLGK 72
>gi|183206879|gb|ACC54610.1| gag protein [Human immunodeficiency virus 1]
Length = 163
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 34 EAMSQVQQTNIMMQKGNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 83
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 84 GKEGHQMKDCTERQANFLGK 103
>gi|183206876|gb|ACC54608.1| gag protein [Human immunodeficiency virus 1]
Length = 163
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 34 EAMSQVQQTNIMMQKGNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 83
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 84 GKEGHQMKDCTERQANFLGK 103
>gi|46137275|ref|XP_390329.1| hypothetical protein FG10153.1 [Gibberella zeae PH-1]
Length = 614
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 72/201 (35%), Gaps = 65/201 (32%)
Query: 171 RYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKK 230
RYF Q C CG H+A +C + V C CGSL+H + +C
Sbjct: 291 RYFPSASDPAQMCLLCGLNTHLAPSCPTLV-----C-SCGSLDHSI----------VC-- 332
Query: 231 GGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL-- 288
CP+K + C KC GH C +L + + C C HL
Sbjct: 333 -------CPEKER--------CRKCRQVGHQASGCTEKLALTKEEGLACVFCNSTDHLEE 377
Query: 289 CCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFA 348
C + + +VS R V P+SC CG++GHF+
Sbjct: 378 QCTEVWRSFHPDVSVVR------------------------KVAFIPASCSMCGSDGHFS 413
Query: 349 RECVSSSKVRKRNIDASTPTF 369
+C + + D S PT+
Sbjct: 414 SDC------KPQRNDMSNPTW 428
>gi|355691442|gb|EHH26627.1| hypothetical protein EGK_16646 [Macaca mulatta]
Length = 270
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C +A++ + C+ CGS EH + +C D CF+
Sbjct: 128 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 187
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
C + GH ++ CPD K + + C CG H C S + + + V
Sbjct: 188 CGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPESQNSERMVTV 237
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C+K GH DCP ++ +C +CG + H++ C+ +L
Sbjct: 119 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 178
Query: 273 DLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+ +C++C GHL C N C CG + H
Sbjct: 179 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEH 220
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 13/119 (10%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVP 298
K ++ +NA VC C GH + C + D+ CY C H C D
Sbjct: 118 KRQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPAL 177
Query: 299 GEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
GE CF CG++GH SC + + A C CG+ H ++C S
Sbjct: 178 GEFPFAKCFVCGEMGHLS---RSC-----PDNPKGLYADGGGCKLCGSVEHLKKDCPES 228
>gi|254667110|gb|ACT76496.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ + ++ ++ R +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQTQQANIMMQRGNFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFI 227
GS H ++ C++ Q F+
Sbjct: 415 GSEGHQMKDCTERQANFL 432
>gi|259124667|gb|ACV93467.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 11/81 (13%)
Query: 150 EGVTTVEISDNIVL-RKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFV 208
E ++ V+ ++NI++ R RG + C+NCG+EGH+A NCR+ RKK C+
Sbjct: 363 EAMSQVQNTNNIMMQRGNFRGQKRIK--------CFNCGKEGHLARNCRAP--RKKGCWK 412
Query: 209 CGSLEHGVRQCSKAQDCFICK 229
CG H ++ C++ Q F+ K
Sbjct: 413 CGKEGHQMKDCTERQANFLGK 433
>gi|118426844|gb|ABK91173.1| gag protein [Human immunodeficiency virus 1]
Length = 140
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLAKNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 69 GKEGHQMKDCTERQANFL 86
>gi|63098410|gb|AAY32450.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 9/72 (12%)
Query: 158 SDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVR 217
S N++ R +GPR C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 369 SMNMMQRSNFKGPRRII-------KCFNCGKEGHIAKNCRAP--RKKGCWKCGKEGHQMK 419
Query: 218 QCSKAQDCFICK 229
C++ Q F+ K
Sbjct: 420 DCTERQANFLGK 431
>gi|409181510|gb|AFV26741.1| gag protein [Human immunodeficiency virus 1]
Length = 494
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 361 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWRC 410
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 411 GKEGHQMKDCTERQANFL 428
>gi|391339578|ref|XP_003744125.1| PREDICTED: uncharacterized protein LOC100903131 [Metaseiulus
occidentalis]
Length = 585
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 54/150 (36%), Gaps = 28/150 (18%)
Query: 204 KPCFVCGSLEHGVRQCSKAQD--CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHD 261
K C C H +C + C +C H A CP+K +C C + GH
Sbjct: 282 KECRNCRQSGHLTHECPLPERIVCILCADTTHIAARCPNK---------ICSTCKNEGHT 332
Query: 262 MFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQ 321
+ C Y L E QC IC FGH +D P F C +
Sbjct: 333 WWRC---YRAQHLLETQCRICNIFGHK-----ADICPDNWRRFHCTTREGPPI------- 377
Query: 322 ACARSRGETVEASPSSCYNCGAEGHFAREC 351
A GE + + C CG GHFA +C
Sbjct: 378 --APEAGEKLSLAKKFCSWCGRRGHFATDC 405
>gi|342887531|gb|EGU87013.1| hypothetical protein FOXB_02407 [Fusarium oxysporum Fo5176]
Length = 631
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 69/197 (35%), Gaps = 58/197 (29%)
Query: 155 VEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEH 214
V DN + ++ P DP Q C CG H+A +C S + C CGSLEH
Sbjct: 287 VPTGDNALEQQRRYFPSAMDP----AQMCLLCGLNTHLAPSCPSLI-----CSSCGSLEH 337
Query: 215 GVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDL 274
IC CP+K + C KC GH C +L
Sbjct: 338 SK----------IC---------CPEKER--------CNKCRQLGHQAGQCTEKLALTKE 370
Query: 275 KEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEAS 334
+ + C C HL E C + W S + R V
Sbjct: 371 EGLACVFCSSMDHL-----------EEQCTQV---------WRSFYPDVSTVR--KVAFI 408
Query: 335 PSSCYNCGAEGHFAREC 351
P+SC CG++ HF+ +C
Sbjct: 409 PASCAVCGSDRHFSSDC 425
>gi|209576171|gb|ACI64055.1| gag protein [Human immunodeficiency virus 1]
Length = 107
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 4 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 53
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 54 GKEGHQMKDCTERQANFLGK 73
>gi|432954505|ref|XP_004085510.1| PREDICTED: zinc finger CCHC domain-containing protein 9-like
[Oryzias latipes]
Length = 259
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 14/97 (14%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFIC 228
C+NC + GH +C A ++ C+ CGS EH + +C D CFIC
Sbjct: 120 CFNCRKPGHGLADCPEADADREMGRGICYRCGSTEHEIHKCRAKVDPALGDYPYAKCFIC 179
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
+ GH ++ CPD K + C CG H C
Sbjct: 180 GQTGHLSRSCPDNPKGLYAEGGSCRLCGSVEHFQKDC 216
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLDDLKEVQCYIC 282
CF C+K GH DCP+ +C +CG + H++ CR +L D +C+IC
Sbjct: 120 CFNCRKPGHGLADCPEADADREMGRGICYRCGSTEHEIHKCRAKVDPALGDYPYAKCFIC 179
Query: 283 RCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
GHL C N SC CG + H
Sbjct: 180 GQTGHLSRSCPDNPKGLYAEGGSCRLCGSVEH 211
>gi|55979927|gb|AAV69377.1| gag protein [Human immunodeficiency virus 1]
Length = 145
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|55979912|gb|AAV69370.1| gag protein [Human immunodeficiency virus 1]
Length = 145
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHEMKDCTERQANFLGK 88
>gi|242029040|gb|ACS76550.1| gag protein [Human immunodeficiency virus 1]
Length = 358
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 250 EAMSQVNSTNIMMQRNNFKGPRKIV-------KCFNCGKEGHIARNCRAP--RKKGCWKC 300
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 301 GREGHQMKDCTERQANFLGK 320
>gi|259129245|gb|ACV95278.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ ++ ++ ++ R RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSHMQQANIMMQRGNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 8/83 (9%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C G GH A A+ + + ++ G + K CF C K GH A++C
Sbjct: 350 CQGVGGPGHKARVLAEAMSHMQQANIM--MQRGNFRGPKRIKCFNCGKEGHLARNCRAPR 407
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 408 KKG------CWKCGKEGHQMKDC 424
>gi|259124693|gb|ACV93475.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 495
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 11/81 (13%)
Query: 150 EGVTTVEISDNIVL-RKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFV 208
E ++ V+ ++NI++ R RG + C+NCG+EGH+A NCR+ RKK C+
Sbjct: 362 EAMSQVQNTNNIMMQRGNFRGQKRIK--------CFNCGKEGHLARNCRAP--RKKGCWK 411
Query: 209 CGSLEHGVRQCSKAQDCFICK 229
CG H ++ C++ Q F+ K
Sbjct: 412 CGKEGHQMKDCTERQANFLGK 432
>gi|225056152|gb|ACN80882.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 10/81 (12%)
Query: 150 EGVTTVEISDNIVLRKL-LRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFV 208
E ++ V S ++++K RGP+ C+NCG+EGH+A NCR+ RKK C+
Sbjct: 364 EAMSQVTSSATVMMQKSNFRGPKRTV-------KCFNCGKEGHIAKNCRAP--RKKGCWK 414
Query: 209 CGSLEHGVRQCSKAQDCFICK 229
CG H +++C++ Q F+ K
Sbjct: 415 CGKEGHQMKECTERQANFLGK 435
>gi|226345310|gb|ACO49151.1| gag protein [Human immunodeficiency virus 1]
Length = 130
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 2 EAMSQVNNTNVMMQRNNFKGPRRTI-------KCFNCGKEGHLARNCRAP--RKKGCWKC 52
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 53 GKEGHQMKDCTERQANFLGK 72
>gi|254584670|ref|XP_002497903.1| ZYRO0F16148p [Zygosaccharomyces rouxii]
gi|186703710|emb|CAQ43401.1| Zinc finger protein GIS2 [Zygosaccharomyces rouxii]
gi|238940796|emb|CAR28970.1| ZYRO0F16148p [Zygosaccharomyces rouxii]
Length = 161
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 65/160 (40%), Gaps = 39/160 (24%)
Query: 181 QTCYNCGEEGHMAVNC---RSAVKRKKP-----------------CFVCGSLEHGVRQCS 220
+ CY CG+ GH+A C R KP C+ CG H +C+
Sbjct: 4 KACYVCGKIGHLAEECDSERLCYNCNKPGHVQSECTLPRTVEFKQCYNCGETGHVKTECT 63
Query: 221 KAQDCFICKKGGHRAKDCPDKHKSGFQNAQV---------CLKCGDSGHDMFSCRNSYSL 271
Q C+ C + GH +++CP+ KS F +A C +CG H C S S
Sbjct: 64 -VQRCYNCNQTGHISRECPEPKKSRFASAGAPTGGKPKVSCYRCGGPNHMAKDCLQSGS- 121
Query: 272 DDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGH 311
+CY C FGHL + PGE C+ C GH
Sbjct: 122 ------KCYSCGKFGHL--SKECPSGPGEKICYNCNGSGH 153
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 66/169 (39%), Gaps = 51/169 (30%)
Query: 203 KKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDM 262
+K C+VCG + H +C + C+ C K GH +C F+ C CG++GH
Sbjct: 3 QKACYVCGKIGHLAEECDSERLCYNCNKPGHVQSECTLPRTVEFKQ---CYNCGETGHVK 59
Query: 263 FSCRNSYSLDDLKEVQ-CYICRCFGHLCCVNISDAVP-----------------GEVSCF 304
C VQ CY C GH IS P +VSC+
Sbjct: 60 TEC----------TVQRCYNCNQTGH-----ISRECPEPKKSRFASAGAPTGGKPKVSCY 104
Query: 305 RCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVS 353
RCG H C+Q S S CY+CG GH ++EC S
Sbjct: 105 RCGGPNHMA---KDCLQ------------SGSKCYSCGKFGHLSKECPS 138
>gi|259124688|gb|ACV93473.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 11/81 (13%)
Query: 150 EGVTTVEISDNIVL-RKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFV 208
E ++ V+ ++NI++ R RG + C+NCG+EGH+A NCR+ RKK C+
Sbjct: 363 EAMSQVQNTNNIMMQRGNFRGQKRIK--------CFNCGKEGHLARNCRAP--RKKGCWK 412
Query: 209 CGSLEHGVRQCSKAQDCFICK 229
CG H ++ C++ Q F+ K
Sbjct: 413 CGKEGHQMKDCTERQANFLGK 433
>gi|2570320|gb|AAC97580.1| gag polyprotein [Human immunodeficiency virus 1]
Length = 497
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 173 FDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICK 229
F P RG + C+NCG+EGH+A NCR+ RKK C+ CG H ++ C++ Q F+ K
Sbjct: 384 FKGPRRGIK-CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKDCTERQANFLGK 437
>gi|405953737|gb|EKC21340.1| Zinc finger CCHC domain-containing protein 9 [Crassostrea gigas]
Length = 232
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 40/96 (41%), Gaps = 12/96 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCS--------KAQDCFICK 229
CYNC GH+ +C A + + CF CGS EH +CS CFIC
Sbjct: 124 VCYNCRGSGHLMSDCPEAKRDIEQGTGICFKCGSTEHSASRCSVKLPPGKFPYAKCFICG 183
Query: 230 KGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
+ GH +K CPD K + C C H C
Sbjct: 184 ETGHLSKQCPDNPKGLYPMGGCCKICESVEHYQRDC 219
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 216 VRQCSKAQD---CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLD 272
V++ K QD C+ C+ GH DCP+ + Q +C KCG + H C
Sbjct: 113 VKRIQKKQDELVCYNCRGSGHLMSDCPEAKRDIEQGTGICFKCGSTEHSASRCSVKLPPG 172
Query: 273 DLKEVQCYICRCFGHL 288
+C+IC GHL
Sbjct: 173 KFPYAKCFICGETGHL 188
>gi|270015347|gb|EFA11795.1| hypothetical protein TcasGA2_TC008574 [Tribolium castaneum]
Length = 851
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAK 236
CY C E GHMA C+ V R K C CG H V+ C K C +C GHRAK
Sbjct: 779 CYRCWEPGHMAARCQ-GVDRSKLCHRCGEEGHSVKTCEKEMFCPVCGVRGHRAK 831
>gi|242030235|gb|ACS77131.1| gag protein [Human immunodeficiency virus 1]
Length = 460
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ I++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 345 EAMSQATIANIMMQRVNFKGPRRTI-------KCFNCGKEGHLARNCRAP--RKKGCWKC 395
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 396 GQEGHQMKDCTERQANFLGK 415
>gi|259124674|gb|ACV93468.1| gag protein, partial [Human immunodeficiency virus 1]
gi|259124684|gb|ACV93472.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 495
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 11/81 (13%)
Query: 150 EGVTTVEISDNIVL-RKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFV 208
E ++ V+ ++NI++ R RG + C+NCG+EGH+A NCR+ RKK C+
Sbjct: 362 EAMSQVQNTNNIMMQRGNFRGQKRIK--------CFNCGKEGHLARNCRAP--RKKGCWK 411
Query: 209 CGSLEHGVRQCSKAQDCFICK 229
CG H ++ C++ Q F+ K
Sbjct: 412 CGKEGHQMKDCTERQANFLGK 432
>gi|255739381|gb|ACU31628.1| gag protein [Human immunodeficiency virus 1]
Length = 493
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 10/73 (13%)
Query: 158 SDNIVL-RKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGV 216
S NI++ R +GPR C+NCG+EGH+A NCR+ RKK C+ CG H +
Sbjct: 369 SKNIMMQRSNFKGPRKII-------KCFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQM 419
Query: 217 RQCSKAQDCFICK 229
+ C++ Q F+ K
Sbjct: 420 KDCTERQANFLGK 432
>gi|147906443|ref|NP_001084565.1| zinc finger, CCHC domain containing 9 [Xenopus laevis]
gi|46250132|gb|AAH68817.1| MGC81425 protein [Xenopus laevis]
Length = 248
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 14/97 (14%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFIC 228
C++C + GH +C ++ ++ CF CGS EH + +C D CFIC
Sbjct: 107 CFHCRKPGHGMADCSEVLRCQESGTGICFRCGSTEHEINKCRAKVDPALGEFPFAKCFIC 166
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
+ GH ++ CPD K + C CG H C
Sbjct: 167 SEMGHLSRSCPDNPKGLYAQGGSCRICGSVEHFQRDC 203
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLDDLKEVQCYIC 282
CF C+K GH DC + + +C +CG + H++ CR +L + +C+IC
Sbjct: 107 CFHCRKPGHGMADCSEVLRCQESGTGICFRCGSTEHEINKCRAKVDPALGEFPFAKCFIC 166
Query: 283 RCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
GHL C N SC CG + H
Sbjct: 167 SEMGHLSRSCPDNPKGLYAQGGSCRICGSVEH 198
>gi|270015490|gb|EFA11938.1| hypothetical protein TcasGA2_TC001896 [Tribolium castaneum]
Length = 723
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAK 236
CY C E GHMA C+ V R K C CG H V+ C K C +C GHRAK
Sbjct: 651 CYRCWEPGHMAARCQ-GVDRSKLCHRCGEEGHSVKTCEKEMFCPVCGVRGHRAK 703
>gi|259124678|gb|ACV93470.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 495
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 11/81 (13%)
Query: 150 EGVTTVEISDNIVL-RKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFV 208
E ++ V+ ++NI++ R RG + C+NCG+EGH+A NCR+ RKK C+
Sbjct: 362 EAMSQVQNTNNIMMQRGNFRGQKRIK--------CFNCGKEGHLARNCRAP--RKKGCWK 411
Query: 209 CGSLEHGVRQCSKAQDCFICK 229
CG H ++ C++ Q F+ K
Sbjct: 412 CGKEGHQMKDCTERQANFLGK 432
>gi|255739457|gb|ACU31666.1| gag protein [Human immunodeficiency virus 1]
gi|255739459|gb|ACU31667.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 10/73 (13%)
Query: 158 SDNIVLRKL-LRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGV 216
S NI+++K +GPR C+NCG+EGH+A NCR+ RKK C+ CG H +
Sbjct: 370 SSNIMMQKSNFKGPRRI-------VKCFNCGKEGHIARNCRAP--RKKGCWKCGKEGHQM 420
Query: 217 RQCSKAQDCFICK 229
+ C++ Q F+ K
Sbjct: 421 KDCTERQANFLGK 433
>gi|358374535|dbj|GAA91126.1| zinc knuckle domain protein [Aspergillus kawachii IFO 4308]
Length = 228
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 75/188 (39%), Gaps = 26/188 (13%)
Query: 183 CYNCGEEGHMAVNC-RSAVKRKKPCFVCGSLEHGVRQCSKAQ------DCFICKKGGHRA 235
CYNC + GH + +C R K C+ C L H C + C+ C + GH A
Sbjct: 28 CYNCKQPGHESSSCPRPRTTETKQCYNCQGLGHVQADCPTLRLNGANGRCYNCSQPGHLA 87
Query: 236 KDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNISD 295
++CP SG A +SG R Y + CY C H D
Sbjct: 88 RNCPAP-ASGAPRAPAPRGGFNSGF-----RGGYGYP--RAATCYKCGGPNHF----ARD 135
Query: 296 AVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSSS 355
+ C+ CG+LGH + C G + ++ CY C GH +R+C ++
Sbjct: 136 CQAQAMKCYACGKLGHI-------SRDCTAPNGGPLSSAGKVCYKCSQAGHISRDCPNNE 188
Query: 356 KVRKRNID 363
V ++ +D
Sbjct: 189 AVAQQPVD 196
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 12/68 (17%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQC---------SKAQDCFICKKGG 232
TCY CG H A +C++ + C+ CG L H R C S + C+ C + G
Sbjct: 122 TCYKCGGPNHFARDCQAQAMK---CYACGKLGHISRDCTAPNGGPLSSAGKVCYKCSQAG 178
Query: 233 HRAKDCPD 240
H ++DCP+
Sbjct: 179 HISRDCPN 186
>gi|307691190|ref|NP_001182668.1| zinc finger, CCHC domain containing 9 [Macaca mulatta]
gi|402871993|ref|XP_003899928.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 1
[Papio anubis]
gi|402871995|ref|XP_003899929.1| PREDICTED: zinc finger CCHC domain-containing protein 9 isoform 2
[Papio anubis]
gi|380817128|gb|AFE80438.1| zinc finger CCHC domain-containing protein 9 [Macaca mulatta]
gi|383422143|gb|AFH34285.1| zinc finger CCHC domain-containing protein 9 [Macaca mulatta]
gi|384949794|gb|AFI38502.1| zinc finger CCHC domain-containing protein 9 [Macaca mulatta]
Length = 270
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFI 227
C++C + GH +C +A++ + C+ CGS EH + +C D CF+
Sbjct: 128 VCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALGEFPFAKCFV 187
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEV 277
C + GH ++ CPD K + + C CG H C S + + + V
Sbjct: 188 CGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPESQNSERMVTV 237
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 217 RQCSK--AQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLD 272
RQ +K A CF C+K GH DCP ++ +C +CG + H++ C+ +L
Sbjct: 119 RQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPALG 178
Query: 273 DLKEVQCYICRCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
+ +C++C GHL C N C CG + H
Sbjct: 179 EFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEH 220
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 13/119 (10%)
Query: 241 KHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLC--CVNISDAVP 298
K ++ +NA VC C GH + C + D+ CY C H C D
Sbjct: 118 KRQAAKKNAMVCFHCRKPGHGIADCPAALENQDMGTGICYRCGSTEHEITKCKAKVDPAL 177
Query: 299 GEVS---CFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHFARECVSS 354
GE CF CG++GH SC + + A C CG+ H ++C S
Sbjct: 178 GEFPFAKCFVCGEMGHLS---RSC-----PDNPKGLYADGGGCKLCGSVEHLKKDCPES 228
>gi|55139287|gb|AAV41308.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 362 EAMSNVNNANIMMQRSNFKGPRRI-------VKCFNCGKEGHIARNCRAP--RKKGCWKC 412
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 413 GKEGHQMKDCTERQANFLGK 432
>gi|18699111|gb|AAL78391.1|AF413967_1 gag protein [Human immunodeficiency virus 1]
Length = 219
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 86 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 135
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 136 GKEGHQMKDCTERQANFL 153
>gi|18699108|gb|AAL78389.1|AF413966_1 gag protein [Human immunodeficiency virus 1]
Length = 219
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 86 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 135
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 136 GKEGHQMKDCTERQANFL 153
>gi|224134074|ref|XP_002327749.1| predicted protein [Populus trichocarpa]
gi|222836834|gb|EEE75227.1| predicted protein [Populus trichocarpa]
Length = 235
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 55/139 (39%), Gaps = 24/139 (17%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQV------------CLKCGDSGHDMFSCRNSYSLD 272
CF C GH A++C + + C KCG+SGH C + +
Sbjct: 107 CFNCGNPGHIARECNNNSSKSYNYNNNNNRTGGGGGDFGCYKCGNSGHFARECTKGNNNN 166
Query: 273 DLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVE 332
CY C FGH+ D G +C+ CG GH C A G
Sbjct: 167 -----GCYSCGGFGHV----ARDCPGGSGACYNCGGHGHL---ARDCTSARGSGGGRFGS 214
Query: 333 ASPSSCYNCGAEGHFAREC 351
+ C+NCG +GHFAR+C
Sbjct: 215 GNTGGCFNCGKDGHFARDC 233
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 26/97 (26%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP----------------CFVCGSLEHGVRQCSKAQD-- 224
C+NCG GH+A C + + C+ CG+ H R+C+K +
Sbjct: 107 CFNCGNPGHIARECNNNSSKSYNYNNNNNRTGGGGGDFGCYKCGNSGHFARECTKGNNNN 166
Query: 225 -CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
C+ C GH A+DCP + C CG GH
Sbjct: 167 GCYSCGGFGHVARDCP-------GGSGACYNCGGHGH 196
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 16/71 (22%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ-------------DCFICK 229
CY+CG GH+A +C C+ CG H R C+ A+ CF C
Sbjct: 168 CYSCGGFGHVARDCPGG---SGACYNCGGHGHLARDCTSARGSGGGRFGSGNTGGCFNCG 224
Query: 230 KGGHRAKDCPD 240
K GH A+DCP+
Sbjct: 225 KDGHFARDCPE 235
>gi|209576167|gb|ACI64053.1| gag protein [Human immunodeficiency virus 1]
Length = 107
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 4 EAMSQVQNTNIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 53
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 54 GKEGHQMKDCTERQANFLGK 73
>gi|407739094|gb|AFU31929.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSHVQQANIMMQRGNFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|242027897|gb|ACS75984.1| gag protein [Human immunodeficiency virus 1]
Length = 453
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 345 EAMSQVNSTNIMMQRNNFKGPRKIV-------KCFNCGKEGHIARNCRAP--RKKGCWKC 395
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 396 GREGHQMKDCTERQANFLGK 415
>gi|209576173|gb|ACI64056.1| gag protein [Human immunodeficiency virus 1]
Length = 107
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 4 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 53
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 54 GKEGHQMKDCTEKQANFL 71
>gi|209576163|gb|ACI64051.1| gag protein [Human immunodeficiency virus 1]
Length = 107
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 4 EAMSQVQNANXMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 53
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 54 GKEGHQMKDCTERQANFLGK 73
>gi|119361874|gb|ABL66879.1| gag protein [Human immunodeficiency virus 1]
Length = 369
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 11/69 (15%)
Query: 160 NIVLRKL-LRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K RGP+ C+NCG+EGH+A NCR+ RKK C+ CG+ H ++
Sbjct: 245 NIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGNEGHQMKD 294
Query: 219 CSKAQDCFI 227
C++ Q F+
Sbjct: 295 CTERQTNFL 303
>gi|118426954|gb|ABK91228.1| gag protein [Human immunodeficiency virus 1]
Length = 169
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ + ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSKVQNASIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|56193075|gb|AAV84145.1| gag protein [Human immunodeficiency virus 1]
Length = 504
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V S+ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 363 EAMSQVNNSNVMMQRSNFKGPRRNI-------KCFNCGKEGHLARNCRAP--RKKGCWKC 413
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 414 GKEGHQMKDCTERQANFLGK 433
>gi|209576143|gb|ACI64041.1| gag protein [Human immunodeficiency virus 1]
Length = 107
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 4 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 53
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 54 GKEGHQMKDCTERQANFLGK 73
>gi|209576111|gb|ACI64025.1| gag protein [Human immunodeficiency virus 1]
Length = 107
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 4 EAMSQVQNANIMLQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 53
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 54 GKEGHQMKDCTERQANFLGK 73
>gi|393906109|gb|EJD74179.1| hypothetical protein LOAG_18462 [Loa loa]
Length = 145
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 58/129 (44%), Gaps = 26/129 (20%)
Query: 183 CYNCGEEGHMAVNC----RSAVKRKKP--CFVCGSLEHGVRQC----------------- 219
CY C E+GH A NC + AV+R CF CG H R+C
Sbjct: 9 CYKCNEKGHFARNCPTQIQEAVRRGGGGDCFNCGQSGHFARECPNQRGGGRYYGGRGGGR 68
Query: 220 SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQC 279
S +C+ C GH A++CP + + G +Q C CG GH C + + D K +C
Sbjct: 69 SGQSECYQCGGFGHFARECPTERRVGGGGSQKCYNCGRFGHISRDCPD-FGSDQSK--RC 125
Query: 280 YICRCFGHL 288
Y C+ GH+
Sbjct: 126 YNCQQIGHI 134
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 24/103 (23%)
Query: 179 GWQTCYNCGEEGHMAVNC-------------RSAVKRKKPCFVCGSLEHGVRQC------ 219
G C+NCG+ GH A C + C+ CG H R+C
Sbjct: 34 GGGDCFNCGQSGHFARECPNQRGGGRYYGGRGGGRSGQSECYQCGGFGHFARECPTERRV 93
Query: 220 --SKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
+Q C+ C + GH ++DCPD G ++ C C GH
Sbjct: 94 GGGGSQKCYNCGRFGHISRDCPD---FGSDQSKRCYNCQQIGH 133
>gi|386306656|gb|AFJ05312.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 496
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICK 229
C+NCG+EGH+A NCR+ RKK C+ CG H +R+C++ Q F+ K
Sbjct: 388 CFNCGKEGHIAKNCRAP--RKKGCWKCGKEGHQMRECTERQANFLGK 432
>gi|242027911|gb|ACS75991.1| gag protein [Human immunodeficiency virus 1]
Length = 349
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 241 EAMSQVNSTNIMMQRNNFKGPRKI-------VKCFNCGKEGHIARNCRAP--RKKGCWKC 291
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 292 GREGHQMKDCTERQANFLGK 311
>gi|302417037|ref|XP_003006350.1| zinc finger protein GIS2 [Verticillium albo-atrum VaMs.102]
gi|261355766|gb|EEY18194.1| zinc finger protein GIS2 [Verticillium albo-atrum VaMs.102]
Length = 147
Score = 51.6 bits (122), Expect = 0.001, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 12/73 (16%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSK---------AQDCFICKKGG 232
TCY CG H A +C++ + C+ CG L H R C+ + C+ C + G
Sbjct: 52 TCYKCGGPNHFARDCQAQAMK---CYACGKLGHISRDCTAPNGGPLNTAGKTCYQCGEAG 108
Query: 233 HRAKDCPDKHKSG 245
H ++DCP K +G
Sbjct: 109 HISRDCPQKVANG 121
Score = 46.2 bits (108), Expect = 0.038, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 202 RKKPCFVCGSLEHGVRQC-SKAQDCFICKKGGHRAKDCPDKHKSGFQNA-QVCLKCGDSG 259
R C+ CG H R C ++A C+ C K GH ++DC + A + C +CG++G
Sbjct: 49 RPATCYKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNGGPLNTAGKTCYQCGEAG 108
Query: 260 HDMFSC 265
H C
Sbjct: 109 HISRDC 114
Score = 41.6 bits (96), Expect = 1.0, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 11/77 (14%)
Query: 275 KEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEAS 334
+ CY C H D + C+ CG+LGH + C G + +
Sbjct: 49 RPATCYKCGGPNHFA----RDCQAQAMKCYACGKLGHIS-------RDCTAPNGGPLNTA 97
Query: 335 PSSCYNCGAEGHFAREC 351
+CY CG GH +R+C
Sbjct: 98 GKTCYQCGEAGHISRDC 114
>gi|209576073|gb|ACI64006.1| gag protein [Human immunodeficiency virus 1]
Length = 107
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 4 EAMSQVQNTNIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 53
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 54 GKEGHQMKDCTERQANFLGK 73
>gi|55979902|gb|AAV69366.1| gag protein [Human immunodeficiency virus 1]
Length = 127
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|6815637|gb|AAF28587.1|AF184455_1 gag protein [Human immunodeficiency virus 1]
Length = 183
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 112 EAMSQVQHTNIMMQRGNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 161
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H +++C++ Q F+
Sbjct: 162 GKEGHQMKECTERQANFL 179
>gi|334883357|dbj|BAK38642.1| unnamed protein product [Tribolium castaneum]
Length = 710
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAK 236
CY C E GHMA C+ V R K C CG H V+ C K C +C GHRAK
Sbjct: 638 CYRCWEPGHMAARCQ-GVDRSKLCHRCGEEGHSVKTCEKEMFCPVCGVRGHRAK 690
>gi|242027899|gb|ACS75985.1| gag protein [Human immunodeficiency virus 1]
Length = 453
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 345 EAMSQVNSTNIMMQRNNFKGPRKIV-------KCFNCGKEGHIARNCRAP--RKKGCWKC 395
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 396 GREGHQMKDCTERQANFLGK 415
>gi|222428364|gb|ACM50021.1| gag protein [Human immunodeficiency virus 1]
Length = 501
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICK 229
C+NCG+EGH+A NCR+ RKK C+ CG H +++CS+ Q F+ K
Sbjct: 393 CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKECSERQANFLGK 437
>gi|209576159|gb|ACI64049.1| gag protein [Human immunodeficiency virus 1]
Length = 107
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 4 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 53
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 54 GKEGHQMKDCTERQANFLGK 73
>gi|55979909|gb|AAV69369.1| gag protein [Human immunodeficiency virus 1]
Length = 151
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 20 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 69
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 70 GKEGHQMKDCTERQANFLGK 89
>gi|270016036|gb|EFA12484.1| hypothetical protein TcasGA2_TC001508 [Tribolium castaneum]
Length = 1171
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAK 236
CY C E GHMA C+ V R K C CG H V+ C K C +C GHRAK
Sbjct: 111 CYRCWEPGHMAARCQ-GVDRSKLCHRCGEEGHSVKTCEKEMFCPVCGVRGHRAK 163
>gi|209576139|gb|ACI64039.1| gag protein [Human immunodeficiency virus 1]
Length = 107
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 4 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 53
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 54 GKEGHQMKDCTERQANFLGK 73
>gi|209576115|gb|ACI64027.1| gag protein [Human immunodeficiency virus 1]
Length = 107
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 4 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 53
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 54 GKEGHQMKDCTERQANFLGK 73
>gi|407739086|gb|AFU31922.1| gag protein [Human immunodeficiency virus 1]
gi|407739102|gb|AFU31936.1| gag protein [Human immunodeficiency virus 1]
gi|407739118|gb|AFU31950.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSHVQQANIMMQRGNFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|300720183|gb|ADK33094.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 10/73 (13%)
Query: 158 SDNIVL-RKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGV 216
S NI++ R +GPR C+NCG+EGH+A NCR+ RKK C+ CG H +
Sbjct: 369 SXNIMMQRSNFKGPRKMI-------KCFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQM 419
Query: 217 RQCSKAQDCFICK 229
+ C++ Q F+ K
Sbjct: 420 KDCTERQANFLGK 432
>gi|209576083|gb|ACI64011.1| gag protein [Human immunodeficiency virus 1]
gi|209576185|gb|ACI64062.1| gag protein [Human immunodeficiency virus 1]
Length = 107
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 4 EAMSQVQNTNIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 53
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 54 GKEGHQMKDCTERQANFLGK 73
>gi|33088368|gb|AAP93226.1| gag protein [Human immunodeficiency virus 1]
Length = 154
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 24 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 73
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 74 GKEGHQMKDCTERQANFLGK 93
>gi|270015492|gb|EFA11940.1| hypothetical protein TcasGA2_TC001898 [Tribolium castaneum]
Length = 710
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAK 236
CY C E GHMA C+ V R K C CG H V+ C K C +C GHRAK
Sbjct: 638 CYRCWEPGHMAARCQ-GVDRSKLCHRCGEEGHSVKTCEKEMFCPVCGVRGHRAK 690
>gi|407740579|gb|AFU33165.1| gag protein [Human immunodeficiency virus 1]
Length = 489
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E +++V+ ++ ++ R +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSSVQHANIMMQRGNFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 415 GKEGHQMKDCTERQANFL 432
>gi|226345304|gb|ACO49148.1| gag protein [Human immunodeficiency virus 1]
Length = 132
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E +++ ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 2 EAMSSANQTNIMMQRNNFKGPRRII-------KCFNCGKEGHIAXNCRAP--RKKGCWKC 52
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 53 GKEGHQMKDCTERQANFLGK 72
>gi|33088442|gb|AAP93263.1| gag protein [Human immunodeficiency virus 1]
Length = 157
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 24 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 73
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 74 GKEGHQMKDCTERQANFL 91
>gi|407739126|gb|AFU31957.1| gag protein [Human immunodeficiency virus 1]
gi|407739142|gb|AFU31971.1| gag protein [Human immunodeficiency virus 1]
gi|407739150|gb|AFU31978.1| gag protein [Human immunodeficiency virus 1]
gi|407739182|gb|AFU32006.1| gag protein [Human immunodeficiency virus 1]
gi|407739190|gb|AFU32013.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSHVQQANIMMQRGNFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|371559464|gb|AEX36647.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQGANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 415 GKEGHQMKDCTERQANFL 432
>gi|259126488|gb|ACV94218.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQHANIMMQKGNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GREGHQMKDCTERQANFLGK 434
>gi|407739166|gb|AFU31992.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSHVQQANIMMQRGNFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|407739110|gb|AFU31943.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSHVQQANIMMQRGNFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|242027909|gb|ACS75990.1| gag protein [Human immunodeficiency virus 1]
Length = 327
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 219 EAMSQVNSTNIMMQRNNFKGPRKI-------VKCFNCGKEGHIARNCRAP--RKKGCWKC 269
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 270 GREGHQMKDCTERQANFLGK 289
>gi|242027903|gb|ACS75987.1| gag protein [Human immunodeficiency virus 1]
gi|242027905|gb|ACS75988.1| gag protein [Human immunodeficiency virus 1]
gi|242027907|gb|ACS75989.1| gag protein [Human immunodeficiency virus 1]
gi|242027913|gb|ACS75992.1| gag protein [Human immunodeficiency virus 1]
gi|242027915|gb|ACS75993.1| gag protein [Human immunodeficiency virus 1]
gi|242027917|gb|ACS75994.1| gag protein [Human immunodeficiency virus 1]
gi|242027919|gb|ACS75995.1| gag protein [Human immunodeficiency virus 1]
Length = 327
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 219 EAMSQVNSTNIMMQRNNFKGPRKI-------VKCFNCGKEGHIARNCRAP--RKKGCWKC 269
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 270 GREGHQMKDCTERQANFLGK 289
>gi|259124539|gb|ACV93418.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICK 229
C+NCGEEGH+A NCR+ RKK C+ CG H ++ C++ Q F+ K
Sbjct: 390 CFNCGEEGHLARNCRAP--RKKGCWKCGKEGHQMKDCTERQANFLGK 434
>gi|225056285|gb|ACN80944.1| gag protein [Human immunodeficiency virus 1]
Length = 466
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICK 229
C+NCG EGH+A NCR+ RKK C+ CG EH ++ C++ Q F+ K
Sbjct: 400 CFNCGREGHIAKNCRAP--RKKGCWKCGKEEHQMKDCTERQANFLGK 444
>gi|223951319|gb|ACN29603.1| gag protein [Human immunodeficiency virus 1]
Length = 501
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICK 229
C+NCG+EGH+A NCR+ RKK C+ CG H +R C++ Q F+ K
Sbjct: 393 CFNCGKEGHIAKNCRAP--RKKGCWKCGKEGHQIRDCTERQANFLGK 437
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHG-VRQCSKAQDCFICKKGGHRAKDCPDK 241
C G GH A A+ + ++ G R K CF C K GH AK+C
Sbjct: 350 CQGVGGPGHKARVLAEAMSQATNSAAAIMMQKGNFRNQRKPVKCFNCGKEGHIAKNCRAP 409
Query: 242 HKSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH + C
Sbjct: 410 RKKG------CWKCGKEGHQIRDC 427
>gi|209576069|gb|ACI64004.1| gag protein [Human immunodeficiency virus 1]
gi|209576071|gb|ACI64005.1| gag protein [Human immunodeficiency virus 1]
gi|209576093|gb|ACI64016.1| gag protein [Human immunodeficiency virus 1]
gi|209576101|gb|ACI64020.1| gag protein [Human immunodeficiency virus 1]
gi|209576153|gb|ACI64046.1| gag protein [Human immunodeficiency virus 1]
gi|209576175|gb|ACI64057.1| gag protein [Human immunodeficiency virus 1]
gi|209576197|gb|ACI64068.1| gag protein [Human immunodeficiency virus 1]
Length = 107
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 4 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 53
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 54 GKEGHQMKDCTERQANFLGK 73
>gi|407739158|gb|AFU31985.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSHVQQANIMMQRGNFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|407038564|gb|EKE39189.1| zinc knuckle domain containing protein [Entamoeba nuttalli P19]
Length = 400
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 203 KKPCFVCGSLEHGVRQCSKAQD--CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGH 260
+K CF CG H R CS+ D CF C K GH K+CP++ + C KCG GH
Sbjct: 309 QKVCFKCGKPGHIGRDCSQPDDKVCFYCGKPGHIGKNCPEQEVPESSDQATCYKCGQVGH 368
Query: 261 DMFSC 265
C
Sbjct: 369 KSMDC 373
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 181 QTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQ--------DCFICKKGG 232
+ C+ CG+ GH+ +C K CF CG H + C + + C+ C + G
Sbjct: 310 KVCFKCGKPGHIGRDCSQP--DDKVCFYCGKPGHIGKNCPEQEVPESSDQATCYKCGQVG 367
Query: 233 HRAKDCPDKHKSGFQ 247
H++ DCP+ + GF+
Sbjct: 368 HKSMDCPENTEGGFK 382
>gi|226345364|gb|ACO49178.1| gag protein [Human immunodeficiency virus 1]
Length = 132
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ +V R +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 2 EAMSQVNNTNILVQRSNFKGPKRII-------KCFNCGKEGHIARNCRAP--RKKGCWKC 52
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 53 GKEGHQMKDCTERQANFLGK 72
>gi|226345350|gb|ACO49171.1| gag protein [Human immunodeficiency virus 1]
Length = 131
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ ++ ++ R +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 2 EAMSQTNMTSVLMQRSNFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 51
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 52 GKEGHQMKDCTERQANFLGK 71
>gi|183206858|gb|ACC54596.1| gag protein [Human immunodeficiency virus 1]
Length = 175
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 43 EAMSQVQHTNILMQRSNFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 92
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 93 GKEGHQMKDCTERQANFL 110
>gi|33088374|gb|AAP93229.1| gag protein [Human immunodeficiency virus 1]
Length = 154
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ S+ ++ + RG R C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 24 EAMSQVQQSNVMMQKGNFRGQRTIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 73
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ CS+ Q F+ K
Sbjct: 74 GKEGHQMKDCSERQANFLGK 93
>gi|374429773|gb|AEZ51108.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICK 229
C+NCG+EGH+A NCR+ RKK C+ CGS H ++ C++ Q F+ K
Sbjct: 391 CFNCGKEGHLARNCRAP--RKKGCWKCGSEGHQMKDCTERQANFLGK 435
>gi|242027589|gb|ACS75831.1| gag protein [Human immunodeficiency virus 1]
Length = 464
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 10/71 (14%)
Query: 160 NIVL-RKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI++ R +GPR C+NCGEEGH+A NCR+ RKK C+ CG H ++
Sbjct: 359 NILMQRSNFKGPRRI-------VKCFNCGEEGHIARNCRAP--RKKGCWKCGKEGHQMKD 409
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 410 CTERQANFLGK 420
>gi|259126517|gb|ACV94229.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICK 229
C+NCG+EGH+A NCR+ RKK C+ CG H +++C++ Q F+ K
Sbjct: 391 CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKECTEGQANFLGK 435
>gi|38198649|ref|NP_938184.1| zinc finger CCHC domain-containing protein 9 [Danio rerio]
gi|29124585|gb|AAH49028.1| Zinc finger, CCHC domain containing 9 [Danio rerio]
Length = 256
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 14/97 (14%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKP----CFVCGSLEHGVRQCSKAQD----------CFIC 228
C+NC + GH +C A ++ C+ CGS EH +++C D CF+C
Sbjct: 117 CFNCRKPGHGLADCPEANNDEEMGRGICYRCGSTEHEIQRCRAKVDPAMGNYPYAKCFVC 176
Query: 229 KKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
+ GH +K CPD K + C CG H C
Sbjct: 177 GQTGHLSKACPDNPKGLYAAGGCCRVCGSVEHFQKDC 213
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 225 CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSY--SLDDLKEVQCYIC 282
CF C+K GH DCP+ + +C +CG + H++ CR ++ + +C++C
Sbjct: 117 CFNCRKPGHGLADCPEANNDEEMGRGICYRCGSTEHEIQRCRAKVDPAMGNYPYAKCFVC 176
Query: 283 RCFGHL---CCVNISDAVPGEVSCFRCGQLGH 311
GHL C N C CG + H
Sbjct: 177 GQTGHLSKACPDNPKGLYAAGGCCRVCGSVEH 208
>gi|410585726|gb|AFV74144.1| gag protein [Human immunodeficiency virus]
Length = 490
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQQTNVMMQRSNFKGPKRIV-------KCFNCGKEGHIAKNCRAP--RKKGCWKC 415
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 416 GQEGHQMKDCTERQANFLGK 435
>gi|386307163|gb|AFJ05561.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 491
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 10/71 (14%)
Query: 160 NIVL-RKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI++ R L+GPR C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 371 NILMQRSNLKGPRRI-------VKCFNCGKEGHIAKNCRAP--RKKGCWKCGKEGHQMKD 421
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 422 CTERQANFLGK 432
>gi|363583939|gb|AEW27503.1| gag protein [Human immunodeficiency virus 1]
Length = 489
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ +V + +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 358 EAMSQVNNANIMVQKSNFKGPRRI-------VKCFNCGKEGHIAKNCRAP--RKKGCWKC 408
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 409 GKEGHQMKDCTERQANFLGK 428
>gi|259124097|gb|ACV93373.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K RGP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
>gi|164606176|gb|ABY62237.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R ++GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 362 EAMSQVTNTNIMMQRGNIKGPRRIV-------KCFNCGKEGHIARNCRAP--RKKGCWKC 412
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 413 GKEGHQMKDCTERQANFLGK 432
>gi|164606174|gb|ABY62236.1| gag protein [Human immunodeficiency virus 1]
gi|283444833|gb|ADB20307.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R ++GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 362 EAMSQVTNTNIMMQRGNIKGPRRIV-------KCFNCGKEGHIARNCRAP--RKKGCWKC 412
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 413 GKEGHQMKDCTERQANFLGK 432
>gi|396075578|gb|AFN81286.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ +V R RG R C+NCG+EGH+A NC++ RKK C+ C
Sbjct: 362 EAMSQVQQTNVMVQRGNFRGQRTIK--------CFNCGKEGHLARNCKAP--RKKGCWKC 411
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H +R C++ Q F+
Sbjct: 412 GKEGHQMRDCTERQANFL 429
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C G GH A A+ + + V ++ G + + CF C K GH A++C
Sbjct: 347 CQGVGGPGHKARVLAEAMSQVQQTNVM--VQRGNFRGQRTIKCFNCGKEGHLARNCKAPR 404
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 405 KKG------CWKCGKEGHQMRDC 421
>gi|259127096|gb|ACV94419.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R RG R C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVHQTNIMMQRGNFRGQRRIK--------CFNCGKEGHLAKNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H +++C++ Q F+ K
Sbjct: 415 GKEGHQMKECTERQANFLGK 434
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 8/83 (9%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C G GH A A+ + + ++ G + + CF C K GH AK+C
Sbjct: 350 CQGVGGPGHKARVLAEAMSQVHQTNIM--MQRGNFRGQRRIKCFNCGKEGHLAKNCRAPR 407
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 408 KKG------CWKCGKEGHQMKEC 424
>gi|238734095|gb|ACR55340.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICK 229
C+NCG+EGH+A NCR+A RKK C+ CG H ++ C++ Q F+ K
Sbjct: 391 CFNCGKEGHLARNCRAA--RKKGCWKCGKEGHQMKDCTERQANFLGK 435
>gi|118426934|gb|ABK91218.1| gag protein [Human immunodeficiency virus 1]
Length = 146
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ + ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNASIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|407739078|gb|AFU31915.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSHVQQANIMMQRGNFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GKEGHQMKDCTERQANFLGK 434
>gi|334884454|gb|AEH21338.1| gag protein, partial [Human immunodeficiency virus 1]
Length = 494
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ + ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 361 EAMSQAQHANIMMQRXNFKGPRRIK--------CFNCGKEGHLAKNCRAP--RKKGCWKC 410
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 411 GKEGHQMKDCTERQANFL 428
>gi|294992867|gb|ADF57549.1| gag protein [Human immunodeficiency virus 1]
Length = 495
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICK 229
CYNCG+EGH+A NCR+ RKK C+ CG H +R C++++ F+ K
Sbjct: 393 CYNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMRDCTESKAHFLGK 437
>gi|209576195|gb|ACI64067.1| gag protein [Human immunodeficiency virus 1]
Length = 107
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 4 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 53
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 54 GKEGHQMKDCTERQANFL 71
>gi|308805915|ref|XP_003080269.1| zinc finger, CCHC domain containing 9 (ISS) [Ostreococcus tauri]
gi|116058729|emb|CAL54436.1| zinc finger, CCHC domain containing 9 (ISS) [Ostreococcus tauri]
Length = 238
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 43/98 (43%), Gaps = 17/98 (17%)
Query: 178 RGWQTCYNCGEEGHMAVNC--RSAVKRKKPCFVCGSLEHGVRQCSKAQD--------CFI 227
RG +TCYNCG H A C + CFVCG H R C K + C I
Sbjct: 78 RGEKTCYNCGSREHTASACAEKWTNYAHAKCFVCGETGHLSRSCGKNANGVYINGGCCKI 137
Query: 228 CKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
C+ H KDCP K S C++CG+ GH C
Sbjct: 138 CRAKDHLVKDCPHKGDS-------CIRCGERGHFAAQC 168
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 57/137 (41%), Gaps = 32/137 (23%)
Query: 182 TCYNCGEEGHMAVNCRSA-------VKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHR 234
TC+ C GH +CR A V+ +K C+ CGS EH C++
Sbjct: 52 TCFGCRGVGHTLRDCRVAKGGAAGSVRGEKTCYNCGSREHTASACAEKW----------- 100
Query: 235 AKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHLCCVNIS 294
+ + +A+ C CG++GH SC + + + C ICR HL +
Sbjct: 101 ---------TNYAHAK-CFVCGETGHLSRSCGKNANGVYINGGCCKICRAKDHL----VK 146
Query: 295 DAVPGEVSCFRCGQLGH 311
D SC RCG+ GH
Sbjct: 147 DCPHKGDSCIRCGERGH 163
>gi|281331901|emb|CAY83112.1| gag polyprotein [Human immunodeficiency virus 1]
Length = 493
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E +++++ ++ ++ R RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 360 EAMSSLQNANIMMQRGNXRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 409
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 410 GKEGHQMKDCNERQANFLGK 429
>gi|255739423|gb|ACU31649.1| gag protein [Human immunodeficiency virus 1]
Length = 504
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 10/71 (14%)
Query: 160 NIVLRKL-LRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+L+K +GPR C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 371 NIMLQKNNFKGPRRII-------KCFNCGKEGHIAKNCRAP--RKKGCWKCGKEGHQMKD 421
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 422 CTERQANFLGK 432
>gi|299929797|gb|ADJ58106.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSHVQNANIMMQRGNFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 415 GQEGHQMKDCTERQANFLGK 434
>gi|255986740|gb|ACU50752.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICK 229
C+NCG+EGH+A NCR+ RKK C+ CG H +R C++ Q F+ K
Sbjct: 392 CFNCGKEGHIAXNCRAP--RKKGCWKCGKEGHQMRDCTERQANFLGK 436
>gi|209576135|gb|ACI64037.1| gag protein [Human immunodeficiency virus 1]
Length = 105
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 4 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 53
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 54 GKEGHQMKDCTERQANFLGK 73
>gi|451168215|gb|AGF30924.1| gag protein [Human immunodeficiency virus 1]
Length = 493
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K +GPR C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 372 NIMMQKGNFKGPRRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGQEGHQMKD 421
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 422 CTERQANFLGK 432
>gi|343416463|emb|CCD20360.1| hypothetical protein, conserved [Trypanosoma vivax Y486]
Length = 416
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 46/108 (42%), Gaps = 19/108 (17%)
Query: 206 CFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSC 265
CF CG H + C+ CF C GH + +CP K ++C +C + GHDM
Sbjct: 10 CFNCGHFGHSSQLCASKPVCFHCFMPGHTSTECPRK-----DMGRLCYRCKEPGHDM--- 61
Query: 266 RNSYSLDDLKEVQCYICRCFGHLCCVNISDAVPGEVSCFRCGQLGHTG 313
L+ QC++C GHL P EV C C Q GH
Sbjct: 62 -----AKSLQSPQCHMCNQTGHLVV-----KCP-EVLCNWCHQKGHMA 98
>gi|296484090|tpg|DAA26205.1| TPA: zinc finger protein 9-like [Bos taurus]
Length = 170
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 70/189 (37%), Gaps = 50/189 (26%)
Query: 183 CYNCGEEGHMAVNCR-------------------SAVKRKKPCFVCGSLEHGVRQCSKAQ 223
C+ CG GH A C S+ C+ CG H + C
Sbjct: 6 CFKCGRVGHWAPACSKGGRARGRGARGRGHGAQCSSTTLPVICYRCGKFGHYAKDCDLLD 65
Query: 224 D-CFICKKGGHRAKDCPDKHKSGFQNAQVCLKCGDSGHDMFSCRNSYSLDDLKEVQCYIC 282
D C+ C K GH AKDC + + V L +GH C D +E +CY C
Sbjct: 66 DICYNCGKXGHIAKDCAEPKR----EESVLLHLWQTGHLARDC------DRQEERKCYSC 115
Query: 283 RCFGHLCCVNISDAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCG 342
GH+ +V C+RCG++ H ++ R E +CY CG
Sbjct: 116 GKXGHI------QQYCTQVKCYRCGEIVHVAIN--------CRKMNEV------NCYRCG 155
Query: 343 AEGHFAREC 351
GH REC
Sbjct: 156 ESGHLTREC 164
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 19/110 (17%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQD--CFICKKGGHRAKDCP 239
CYNCG+ GH+A +C + + H R C + ++ C+ C K GH + C
Sbjct: 67 ICYNCGKXGHIAKDCAEPKREESVLLHLWQTGHLARDCDRQEERKCYSCGKXGHIQQYC- 125
Query: 240 DKHKSGFQNAQV-CLKCGDSGHDMFSCRNSYSLDDLKEVQCYICRCFGHL 288
QV C +CG+ H +CR + EV CY C GHL
Sbjct: 126 ---------TQVKCYRCGEIVHVAINCRK------MNEVNCYRCGESGHL 160
>gi|259124095|gb|ACV93372.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K RGP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
>gi|209576187|gb|ACI64063.1| gag protein [Human immunodeficiency virus 1]
Length = 107
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 4 EAMSQVQNANIMMQKSNFRGPKRLK--------CFNCGKEGHIARNCRAP--RKKGCWKC 53
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 54 GKEGHQMKDCTERQANFLGK 73
>gi|164606178|gb|ABY62238.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R ++GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 362 EAMSQVTNTNIMMQRGNIKGPRRIV-------KCFNCGKEGHIARNCRAP--RKKGCWKC 412
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 413 GKEGHQMKDCTERQANFLGK 432
>gi|118426830|gb|ABK91166.1| gag protein [Human immunodeficiency virus 1]
Length = 120
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLAKNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 69 GKEGHQMKDCTERQANFL 86
>gi|73913902|gb|AAZ91872.1| gag protein [Human immunodeficiency virus 1]
Length = 498
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 362 EAMSQANSTNVLIQRSNFKGPRRIV-------KCFNCGKEGHIAKNCRAP--RKKGCWKC 412
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 413 GKEGHQMKDCTERQANFLGK 432
>gi|31980426|dbj|BAC77746.1| Gag polyprotein [Human immunodeficiency virus 1]
gi|31980436|dbj|BAC77755.1| Gag polyprotein [Human immunodeficiency virus 1]
Length = 498
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ R +RG + C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVQHTNIMMQRGSIRGQKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H +++C++ Q F+ K
Sbjct: 415 GKEGHQMKECTERQANFLGK 434
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 182 TCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDK 241
C G GH A A+ + + + ++ G + K CF C K GH A++C
Sbjct: 349 ACQGVGGPGHKARVLAEAMSQVQHTNIM--MQRGSIRGQKRIKCFNCGKEGHLARNCRAP 406
Query: 242 HKSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 407 RKKG------CWKCGKEGHQMKEC 424
>gi|320410169|gb|ADW26872.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 8/80 (10%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V S NI+++ RG F P R C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVTNSANIMMQ---RG--NFRP-QRKXVKCFNCGKEGHIAKNCRAP--RKKGCWKC 416
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 417 GKEGHQMKXCTERQANFLGK 436
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 30/83 (36%), Gaps = 6/83 (7%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C G GH A A+ + R K CF C K GH AK+C
Sbjct: 350 CQGVGGPGHKARVLAEAMSQVTNSANIMMQRGNFRPQRKXVKCFNCGKEGHIAKNCRAPR 409
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 410 KKG------CWKCGKEGHQMKXC 426
>gi|270015488|gb|EFA11936.1| hypothetical protein TcasGA2_TC001894 [Tribolium castaneum]
Length = 502
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAK 236
CY C E GHMA C+ V R K C CG H V+ C K C +C GHRAK
Sbjct: 430 CYRCWEPGHMAARCQ-GVDRSKLCHRCGEEGHSVKTCEKEMFCPVCGVRGHRAK 482
>gi|259125625|gb|ACV93859.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K RGP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
>gi|226345116|gb|ACO49058.1| gag protein [Human immunodeficiency virus 1]
Length = 132
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 2 EAMSQVNNTNIMMQRNNFKGPRRI-------VKCFNCGKEGHIAKNCRAP--RKKGCWKC 52
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 53 GKEGHQMKDCTERQANFLGK 72
>gi|363583933|gb|AEW27498.1| gag protein [Human immunodeficiency virus 1]
Length = 489
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ +V + +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 358 EAMSQVNNANIMVQKSNFKGPRRI-------VKCFNCGKEGHIAKNCRAP--RKKGCWKC 408
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 409 GKEGHQMKDCTERQANFLGK 428
>gi|209576149|gb|ACI64044.1| gag protein [Human immunodeficiency virus 1]
Length = 107
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 4 EAMSQVQGANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 53
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 54 GKEGHQMKDCTERQANFLGK 73
>gi|164606182|gb|ABY62240.1| gag protein [Human immunodeficiency virus 1]
Length = 492
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R ++GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 362 EAMSQVTNTNIMMQRGNIKGPRRI-------VKCFNCGKEGHIARNCRAP--RKKGCWKC 412
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 413 GKEGHQMKDCTERQANFLGK 432
>gi|55979900|gb|AAV69365.1| gag protein [Human immunodeficiency virus 1]
Length = 123
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|300720186|gb|ADK33096.1| gag protein [Human immunodeficiency virus 1]
Length = 493
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V + ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 363 EAMSQVNHPNIMMQRNNFKGPRRI-------VKCFNCGKEGHIAXNCRAP--RKKGCWKC 413
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 414 GKEGHQMKDCTERQANFLGK 433
>gi|255739425|gb|ACU31650.1| gag protein [Human immunodeficiency virus 1]
Length = 504
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 10/71 (14%)
Query: 160 NIVLRKL-LRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+L+K +GPR C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 371 NIMLQKNNFKGPRRII-------KCFNCGKEGHIAKNCRAP--RKKGCWKCGKEGHQMKD 421
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 422 CTERQANFLGK 432
>gi|226345388|gb|ACO49190.1| gag protein [Human immunodeficiency virus 1]
Length = 132
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V S+ ++ R +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 2 EAMSQVNHSNIMMQRNNFKGPKRII-------KCFNCGKEGHIAKNCRAP--RKKGCWKC 52
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 53 GKEGHQMKDCTERQANFLGK 72
>gi|294470716|gb|ADE80750.1| cold shock domain protein 3 [Eutrema salsugineum]
Length = 295
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 68/186 (36%), Gaps = 35/186 (18%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
CYNCG GH A +CR G + + GH AKDC
Sbjct: 128 CYNCGNVGHFARDCRQNAGGNSVGGGGGGACYNCGEV------------GHMAKDCRGGS 175
Query: 243 KSGFQNAQV-------CLKCGDSGHDMFSCRNSYSLDDLKEV----QCYICRCFGHLCCV 291
C CGD GH CR + D CY C FGH+ V
Sbjct: 176 GGNRYGGGGRGSGGEGCYMCGDVGHFARDCRQNVGGDVGGGGGGGNTCYTCGGFGHMARV 235
Query: 292 NIS----DAVPGEVSCFRCGQLGHTGLHWNSCMQACARSRGETVEASPSSCYNCGAEGHF 347
S G +C+ CG +GH + C R RG + S C+ CG EGHF
Sbjct: 236 CTSKRPSGGGGGVGACYECGGIGHL-------ARDCDR-RGSGGGSGSSKCFTCGKEGHF 287
Query: 348 ARECVS 353
AREC S
Sbjct: 288 ARECSS 293
>gi|300720651|gb|ADK33406.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 362 EAMSNVNNANIMMQRSNFKGPRRI-------VKCFNCGKEGHIARNCRAP--RKKGCWKC 412
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 413 GKEGHQMKDCTERQANFLGK 432
>gi|299929799|gb|ADJ58107.1| gag protein [Human immunodeficiency virus 1]
Length = 486
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ + ++ ++ R +GP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQAQHANVMMQRGNFKGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H +++C++ Q F+ K
Sbjct: 415 GKEGHQMKECTERQANFLGK 434
>gi|259127085|gb|ACV94416.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R RG R C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVHQTNIMMQRGNFRGQRRIK--------CFNCGKEGHLAKNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H +++C++ Q F+ K
Sbjct: 415 GKEGHQMKECTERQANFLGK 434
>gi|259124159|gb|ACV93403.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K RGP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
>gi|225056150|gb|ACN80881.1| gag protein [Human immunodeficiency virus 1]
Length = 500
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 10/81 (12%)
Query: 150 EGVTTVEISDNIVLRKL-LRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFV 208
E ++ V S ++++K RGP+ C+NCG+EGH+A NCR+ RKK C+
Sbjct: 364 EAMSQVTNSATVMMQKSNFRGPKRTV-------KCFNCGKEGHIAKNCRAP--RKKGCWK 414
Query: 209 CGSLEHGVRQCSKAQDCFICK 229
CG H +++C++ Q F+ K
Sbjct: 415 CGKEGHQMKECTERQANFLGK 435
>gi|225056148|gb|ACN80880.1| gag protein [Human immunodeficiency virus 1]
Length = 503
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 10/81 (12%)
Query: 150 EGVTTVEISDNIVLRKL-LRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFV 208
E ++ V S ++++K RGP+ C+NCG+EGH+A NCR+ RKK C+
Sbjct: 364 EAMSQVTNSATVMMQKSNFRGPKRTV-------KCFNCGKEGHIAKNCRAP--RKKGCWK 414
Query: 209 CGSLEHGVRQCSKAQDCFICK 229
CG H +++C++ Q F+ K
Sbjct: 415 CGKEGHQMKECTERQANFLGK 435
>gi|213138293|gb|ACJ44810.1| gag protein [Human immunodeficiency virus 1]
Length = 490
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 10/75 (13%)
Query: 156 EISDNIVLRKL-LRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEH 214
+ + NI+++K +GPR C+NCG+EGH+A NCR+ RKK C+ CG H
Sbjct: 366 QANSNIMMQKSNFKGPRRII-------KCFNCGKEGHLAKNCRAP--RKKGCWKCGKEGH 416
Query: 215 GVRQCSKAQDCFICK 229
++ C++ Q F+ K
Sbjct: 417 QMKDCTERQANFLGK 431
>gi|209576091|gb|ACI64015.1| gag protein [Human immunodeficiency virus 1]
Length = 107
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 4 EAMSQVQNTNIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 53
Query: 210 GSLEHGVRQCSKAQDCFI 227
G H ++ C++ Q F+
Sbjct: 54 GKEGHQMKDCTERQANFL 71
>gi|226345386|gb|ACO49189.1| gag protein [Human immunodeficiency virus 1]
Length = 130
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V S ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 2 EAMSQVNNSKVMMQRSNFKGPRRIV-------KCFNCGKEGHIARNCRAP--RKKGCWKC 52
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 53 GKEGHQMKDCTERQANFLGK 72
>gi|213138166|gb|ACJ44754.1| gag protein [Human immunodeficiency virus 1]
Length = 496
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R +GPR C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 361 EAMSNVNNANIMMQRSNFKGPRRI-------VKCFNCGKEGHIARNCRAP--RKKGCWKC 411
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 412 GKEGHQMKDCTERQANFLGK 431
>gi|259127116|gb|ACV94427.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V ++ ++ R RG R C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 365 EAMSQVHQTNIMMQRGNFRGQRRIK--------CFNCGKEGHLAKNCRAP--RKKGCWKC 414
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H +++C++ Q F+ K
Sbjct: 415 GKEGHQMKECTERQANFLGK 434
>gi|255986310|gb|ACU50538.1| gag protein [Human immunodeficiency virus 1]
Length = 351
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICK 229
C+NCG+EGHMA NCR+ RKK C+ CG H ++ C++ Q F+ K
Sbjct: 244 CFNCGKEGHMAKNCRAP--RKKGCWKCGKEGHQMKDCTEXQANFLGK 288
Score = 38.5 bits (88), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 30/83 (36%), Gaps = 6/83 (7%)
Query: 183 CYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQCSKAQDCFICKKGGHRAKDCPDKH 242
C G GH A A+ + R K CF C K GH AK+C
Sbjct: 202 CQGVGGPGHKARVLAEAMSQMTNPAXXMMQRGNFRNQRKVFKCFNCGKEGHMAKNCRAPR 261
Query: 243 KSGFQNAQVCLKCGDSGHDMFSC 265
K G C KCG GH M C
Sbjct: 262 KKG------CWKCGKEGHQMKDC 278
>gi|227057940|gb|ACP18932.1| gag protein [Human immunodeficiency virus 1]
Length = 499
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 10/73 (13%)
Query: 158 SDNIVL-RKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGV 216
S NI++ R +GPR C+NCG+EGH+A NCR+ RKK C+ CG H +
Sbjct: 369 STNIMMQRSNFKGPRRII-------KCFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQM 419
Query: 217 RQCSKAQDCFICK 229
+ C++ Q F+ K
Sbjct: 420 KDCTERQANFLGK 432
>gi|55979898|gb|AAV69364.1| gag protein [Human immunodeficiency virus 1]
Length = 116
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
Query: 150 EGVTTVEISDNIVLRKLLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVC 209
E ++ V+ ++ ++ + RGP+ C+NCG+EGH+A NCR+ RKK C+ C
Sbjct: 19 EAMSQVQNANIMMQKSNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKC 68
Query: 210 GSLEHGVRQCSKAQDCFICK 229
G H ++ C++ Q F+ K
Sbjct: 69 GKEGHQMKDCTERQANFLGK 88
>gi|259125662|gb|ACV93874.1| gag protein [Human immunodeficiency virus 1]
Length = 497
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 11/71 (15%)
Query: 160 NIVLRK-LLRGPRYFDPPDRGWQTCYNCGEEGHMAVNCRSAVKRKKPCFVCGSLEHGVRQ 218
NI+++K RGP+ C+NCG+EGH+A NCR+ RKK C+ CG H ++
Sbjct: 374 NIMMQKGNFRGPKRIK--------CFNCGKEGHLARNCRAP--RKKGCWKCGKEGHQMKD 423
Query: 219 CSKAQDCFICK 229
C++ Q F+ K
Sbjct: 424 CTERQANFLGK 434
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.131 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,302,811,640
Number of Sequences: 23463169
Number of extensions: 370660491
Number of successful extensions: 1788274
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 20638
Number of HSP's that attempted gapping in prelim test: 1561444
Number of HSP's gapped (non-prelim): 173177
length of query: 491
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 344
effective length of database: 8,910,109,524
effective search space: 3065077676256
effective search space used: 3065077676256
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 79 (35.0 bits)