Citrus Sinensis ID: 011184
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 491 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FHD7 | 487 | Probable serine/threonine | no | no | 0.987 | 0.995 | 0.758 | 0.0 | |
| Q944A7 | 512 | Probable serine/threonine | no | no | 0.908 | 0.871 | 0.652 | 1e-180 | |
| Q7XJT7 | 465 | Probable inactive recepto | no | no | 0.928 | 0.980 | 0.453 | 1e-117 | |
| Q06548 | 410 | Protein kinase APK1A, chl | no | no | 0.556 | 0.665 | 0.328 | 2e-37 | |
| P46573 | 412 | Protein kinase APK1B, chl | no | no | 0.564 | 0.672 | 0.334 | 3e-37 | |
| Q8H186 | 389 | Probable receptor-like pr | no | no | 0.572 | 0.722 | 0.316 | 1e-36 | |
| Q9SFT7 | 414 | Serine/threonine-protein | no | no | 0.564 | 0.669 | 0.345 | 4e-36 | |
| O48814 | 395 | Serine/threonine-protein | no | no | 0.602 | 0.749 | 0.314 | 5e-36 | |
| O49839 | 426 | Protein kinase 2A, chloro | no | no | 0.608 | 0.701 | 0.313 | 5e-36 | |
| O49840 | 426 | Protein kinase 2B, chloro | no | no | 0.582 | 0.671 | 0.307 | 1e-35 |
| >sp|Q9FHD7|Y5126_ARATH Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 793 bits (2047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/485 (75%), Positives = 422/485 (87%)
Query: 1 MGIQCSKFTACCWNSQFKATVLEAPDVENDEMSEVDGLPSFREFTLEQLKNATSGFAVEN 60
MG + SK +A C S+ + + ++ + E + LP FREF++E ++NATSGFA EN
Sbjct: 1 MGCEVSKLSALCCVSESGRSNPDVTGLDEEGRGESNDLPQFREFSIETIRNATSGFAAEN 60
Query: 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLG 120
IVSEHGE+APNVVYKGKLENQRRIAVKRFNR +WPD RQFLEEA++VGQLRN+R+ NLLG
Sbjct: 61 IVSEHGERAPNVVYKGKLENQRRIAVKRFNRKSWPDSRQFLEEAKAVGQLRNHRMANLLG 120
Query: 121 CCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180
CC E +ERLL+AE+MPNETLAKHLFHWE+ PMKWAMRLRV LH+AQALEYCTSKGRALYH
Sbjct: 121 CCYEDEERLLIAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGRALYH 180
Query: 181 DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
DLNAYR+LFD+D NPRLS FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT
Sbjct: 181 DLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALDLIRDRN+QML DS LEGQF+ DDGTEL+RLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNIQMLMDSGLEGQFSSDDGTELIRLASRCLQYEPRER 300
Query: 301 PNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISY 360
PNPKSLV+A+ PLQK+ E+ SH L+G+P+SA+ + LSPLGEAC R DLTAIHEI+EK+ Y
Sbjct: 301 PNPKSLVSAMIPLQKDLEIASHQLLGVPNSATTTALSPLGEACLRSDLTAIHEIIEKLGY 360
Query: 361 KDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVY 420
KDDEG ELSFQMWTDQMQ+TL KKKGD AFR KD AIECY+QFI+ GTM SPTV+
Sbjct: 361 KDDEGATTELSFQMWTDQMQDTLVFKKKGDSAFRHKDFAKAIECYSQFIEVGTMGSPTVH 420
Query: 421 ARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTL 480
AR+SLCYLM+DMP++ALN+AMQAQ+ISP WHIASYLQA ALSA+G ENEA ALK+G L
Sbjct: 421 ARQSLCYLMNDMPREALNNAMQAQVISPAWHIASYLQAVALSALGQENEAHTALKDGAML 480
Query: 481 EAKKN 485
E+K+N
Sbjct: 481 ESKRN 485
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q944A7|Y4523_ARATH Probable serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 632 bits (1630), Expect = e-180, Method: Compositional matrix adjust.
Identities = 295/452 (65%), Positives = 365/452 (80%), Gaps = 6/452 (1%)
Query: 38 LPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDP 97
+PSF EF+ LK AT+ F+ +NIVSE GEKAPN+VYKG+L+N+R IAVK+F +MAWP+P
Sbjct: 55 IPSFSEFSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQNRRWIAVKKFTKMAWPEP 114
Query: 98 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 157
+QF EEA VG+LR+NRL NL+G CC+GDERLLVAE+MPN+TLAKHLFHWE ++WAMR
Sbjct: 115 KQFAEEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMR 174
Query: 158 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 217
LRV ++A+AL+YC+++GR LYHDLNAYR+LFDEDG+PRLS FGLMKNSRDGKSYSTNLA
Sbjct: 175 LRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLA 234
Query: 218 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 277
+TPPEYLR GRVTPESV YSFGT+LLDLLSGKHIPPSHALD+IR +N+ +L DS LEG+F
Sbjct: 235 YTPPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHLEGKF 294
Query: 278 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPH-----SAS 332
+ ++ T +V LAS+CLQYEPRERPN K LV L+PLQ +++VPS+V++GI S
Sbjct: 295 STEEATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQEEAPSTP 354
Query: 333 VSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVA 392
PLSPLGEACSR DLTAIH+IL Y+DDEG NELSFQ WT QM++ L+++K+GD +
Sbjct: 355 QRPLSPLGEACSRMDLTAIHQILVMTHYRDDEGT-NELSFQEWTQQMKDMLDARKRGDQS 413
Query: 393 FRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI 452
FR+KD K AI+CY+QFID GTMVSPTV+ RRSLCYL+ D P AL DAMQAQ + P W
Sbjct: 414 FREKDFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCVYPDWPT 473
Query: 453 ASYLQAAALSAMGMENEAQVALKEGTTLEAKK 484
A Y+Q+ AL+ + M +A L E LE K+
Sbjct: 474 AFYMQSVALAKLNMNTDAADMLNEAAQLEEKR 505
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q7XJT7|SSP_ARATH Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1 | Back alignment and function description |
|---|
Score = 421 bits (1082), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/483 (45%), Positives = 310/483 (64%), Gaps = 27/483 (5%)
Query: 10 ACCWNSQFKATVLEAPDVENDEMSEVDGL----PSFREFTLEQLKNATSGFAVENIVSEH 65
CC++ +TV D D SE P +F+ LK AT+ F+ ENIVS+
Sbjct: 2 GCCYS--LSSTVDPVQDHTTDASSEPRNGGGEDPPLTKFSFSALKTATNHFSPENIVSD- 58
Query: 66 GEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG 125
+ +VV+KG+L+N +A+KRFN MAW DP+ FLEEA+ VG+LR+ RL NL+G CC+G
Sbjct: 59 --QTSDVVFKGRLQNGGFVAIKRFNNMAWSDPKLFLEEAQRVGKLRHKRLVNLIGYCCDG 116
Query: 126 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 185
D+R LVA++M N+TLAK LF + M W++RLRV +A+AL+YC + G A Y++L+AY
Sbjct: 117 DKRFLVADFMANDTLAKRLFQRKYQTMDWSIRLRVAYFVAEALDYCNTAGFASYNNLSAY 176
Query: 186 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 245
++LFDEDG+ LS FGLMK + + + TG V PE+VIY FGT+L++L
Sbjct: 177 KVLFDEDGDACLSCFGLMKEINNDQ-------------ITTGSVNPENVIYRFGTVLVNL 223
Query: 246 LSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 305
LSGK IPPSHA ++I +N+ L D L+G+F+ D+ + +LAS+CL+YE +E PN K
Sbjct: 224 LSGKQIPPSHAPEMIHRKNVFKLMDPYLKGKFSIDEANVVYKLASQCLKYEGQESPNTKE 283
Query: 306 LVTALSPLQKETEVPSHVLMGIPH----SASVSPLSPLGEACSRRDLTAIHEILEKISYK 361
+V L LQ TE PS+ ++ + + ++S S LSPLGEAC R DL +IH IL Y
Sbjct: 284 IVATLETLQTRTEAPSYEVVEMTNQEKDASSSSNLSPLGEACLRMDLASIHSILVLAGYD 343
Query: 362 DDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYA 421
DD+ + ELSF+ W +++E + ++ GD AF ++D K AI CY+QF++ ++V P+VYA
Sbjct: 344 DDKDII-ELSFEEWIQEVKELQDVRRNGDRAFVEQDFKTAIACYSQFVEERSLVYPSVYA 402
Query: 422 RRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE 481
RRSL YL D P+ AL D M AQ + P W A YLQ+ AL+ + M ++ LKE LE
Sbjct: 403 RRSLSYLFCDEPEKALLDGMHAQGVFPDWPTAFYLQSVALAKLDMNTDSADTLKEAALLE 462
Query: 482 AKK 484
KK
Sbjct: 463 VKK 465
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Probable inactive protein kinase that activates the YODA MAP kinase cascade, regulating the asymmetric first division, and thus embryo polarity. Acts as an adapter at the plasma membrane, possibly recruiting an activator. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q06548|APK1A_ARATH Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 163/307 (53%), Gaps = 34/307 (11%)
Query: 39 PSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRR----------IAVKR 88
P+ + F+ +LK+AT F ++++ GE V+KG ++ + IAVK+
Sbjct: 51 PNLKSFSFAELKSATRNFRPDSVL---GEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKK 107
Query: 89 FNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWE 148
N+ W +++L E +GQ + L L+G C E + RLLV E+MP +L HLF
Sbjct: 108 LNQDGWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRG 167
Query: 149 TH--PMKWAMRLRVVLHLAQALEYC-TSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 205
+ P+ W +RL+V L A+ L + +S+ R +Y D IL D + N +LS FGL K+
Sbjct: 168 LYFQPLSWKLRLKVALGAAKGLAFLHSSETRVIYRDFKTSNILLDSEYNAKLSDFGLAKD 227
Query: 206 SRDG-KSY-STNL----AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP----PSH 255
G KS+ ST + + PEYL TG +T +S +YSFG +LL+LLSG+ PS
Sbjct: 228 GPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSG 287
Query: 256 ALDLIR--------DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 307
+L+ R + + D+ L+ Q++ ++ ++ L+ RCL E + RPN +V
Sbjct: 288 ERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVV 347
Query: 308 TALSPLQ 314
+ L +Q
Sbjct: 348 SHLEHIQ 354
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Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P46573|APK1B_ARATH Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2 | Back alignment and function description |
|---|
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 166/311 (53%), Gaps = 34/311 (10%)
Query: 39 PSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRR----------IAVKR 88
P+ + FT +LK AT F ++++ E G + V+KG ++ Q IAVK+
Sbjct: 52 PNLKSFTFAELKAATRNFRPDSVLGEGGFGS---VFKGWIDEQTLTASKPGTGVVIAVKK 108
Query: 89 FNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWE 148
N+ W +++L E +GQ + L L+G C E + RLLV E+MP +L HLF
Sbjct: 109 LNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRG 168
Query: 149 TH--PMKWAMRLRVVLHLAQALEYC-TSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 205
++ P+ W +RL+V L A+ L + ++ +Y D IL D + N +LS FGL K+
Sbjct: 169 SYFQPLSWTLRLKVALGAAKGLAFLHNAETSVIYRDFKTSNILLDSEYNAKLSDFGLAKD 228
Query: 206 SRDG-KSY-STNL----AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG-----KHIPPS 254
G KS+ ST + + PEYL TG +T +S +YS+G +LL++LSG K+ PP
Sbjct: 229 GPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPG 288
Query: 255 H------ALDLIRD-RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 307
A L+ + R L + D+ L+ Q++ ++ ++ LA RCL +E + RPN +V
Sbjct: 289 EQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEVV 348
Query: 308 TALSPLQKETE 318
+ L +Q E
Sbjct: 349 SHLEHIQTLNE 359
|
Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8H186|Y3545_ARATH Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 159/316 (50%), Gaps = 35/316 (11%)
Query: 40 SFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRR----------IAVKRF 89
+ + F+ +LK AT F +++V GE V++G L+ IAVKR
Sbjct: 45 TVKSFSFNELKLATRNFRSDSVV---GEGGFGCVFRGWLDETTLTPTKSSSGLVIAVKRL 101
Query: 90 NRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLF---H 146
N + R++L E +GQL + L L+G C E ++RLLV E+M +L HLF +
Sbjct: 102 NPDGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGN 161
Query: 147 WETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMKN 205
+ P+ W +R++V L A+ L + S + +Y D+ A IL D D N +LS FGL ++
Sbjct: 162 KDFKPLSWILRIKVALDAAKGLAFLHSDPVKVIYRDIKASNILLDSDFNAKLSDFGLARD 221
Query: 206 SRDG-KSYST-----NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSH 255
G +SY + + PEY+ TG + S +YSFG +LL+LL G+ H P+
Sbjct: 222 GPMGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAK 281
Query: 256 ALDLI--------RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 307
+L+ R + ++ D+ L Q+ + L +A +CL +EP+ RP +V
Sbjct: 282 EQNLVDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLASIAVQCLSFEPKSRPTMDQVV 341
Query: 308 TALSPLQKETEVPSHV 323
AL LQ P++V
Sbjct: 342 RALVQLQDSVVKPANV 357
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SFT7|Y3707_ARATH Serine/threonine-protein kinase At3g07070 OS=Arabidopsis thaliana GN=At3g07070 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/313 (34%), Positives = 152/313 (48%), Gaps = 36/313 (11%)
Query: 29 NDEMSEVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRI-AVK 87
NDE EV + + F+ +L AT F E ++ GE VYKGKLE I AVK
Sbjct: 52 NDEDKEVTNNIAAQTFSFRELATATKNFRQECLI---GEGGFGRVYKGKLEKTGMIVAVK 108
Query: 88 RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW 147
+ +R ++F+ E + L + L NL+G C +GD+RLLV EYM +L HL
Sbjct: 109 QLDRNGLQGNKEFIVEVLMLSLLHHKHLVNLIGYCADGDQRLLVYEYMSRGSLEDHLLDL 168
Query: 148 --ETHPMKWAMRLRVVLHLAQALEYCTSKGR--ALYHDLNAYRILFDEDGNPRLSTFGLM 203
+ P+ W R+R+ L A LEY K +Y DL A IL D + N +LS FGL
Sbjct: 169 TPDQIPLDWDTRIRIALGAAMGLEYLHDKANPPVIYRDLKAANILLDGEFNAKLSDFGLA 228
Query: 204 KNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL 257
K G + + PEY RTG++T +S +YSFG +LL+L++G+ + +
Sbjct: 229 KLGPVGDKQHVSSRVMGTYGYCAPEYQRTGQLTTKSDVYSFGVVLLELITGRRV-----I 283
Query: 258 DLIRDRNLQMLT-----------------DSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
D R ++ Q L D LEG F + + V +A+ CLQ E R
Sbjct: 284 DTTRPKDEQNLVTWAQPVFKEPSRFPELADPSLEGVFPEKALNQAVAVAAMCLQEEATVR 343
Query: 301 PNPKSLVTALSPL 313
P +VTAL L
Sbjct: 344 PLMSDVVTALGFL 356
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O48814|BIK1_ARATH Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 163/334 (48%), Gaps = 38/334 (11%)
Query: 20 TVLEAPDVENDEMSEVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLE 79
TV A E + +S + FT +LK AT F ++++ GE V+KG L+
Sbjct: 35 TVAAAQKTEGEILSST----PVKSFTFNELKLATRNFRPDSVI---GEGGFGCVFKGWLD 87
Query: 80 NQRR----------IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 129
IAVK+ N+ + R++L E +GQL + L L+G C E + RL
Sbjct: 88 ESTLTPTKPGTGLVIAVKKLNQEGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEHRL 147
Query: 130 LVAEYMPNETLAKHLFHWETH--PMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYR 186
LV E+M +L HLF + P+ W +R+ V L A+ L + S + +Y D+ A
Sbjct: 148 LVYEFMQKGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLHSDPVKVIYRDIKASN 207
Query: 187 ILFDEDGNPRLSTFGLMKNSRDGK-SYST-----NLAFTPPEYLRTGRVTPESVIYSFGT 240
IL D D N +LS FGL ++ G SY + + PEY+ +G + S +YSFG
Sbjct: 208 ILLDADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGV 267
Query: 241 LLLDLLSGK----HIPPSHALDLI--------RDRNLQMLTDSCLEGQFTDDDGTELVRL 288
LLL++LSGK H P+ +L+ R + ++ D+ L+ Q+ ++ + +
Sbjct: 268 LLLEILSGKRALDHNRPAKEENLVDWARPYLTSKRKVLLIVDNRLDTQYLPEEAVRMASV 327
Query: 289 ASRCLQYEPRERPNPKSLVTALSPLQKETEVPSH 322
A +CL +EP+ RP +V AL LQ PS
Sbjct: 328 AVQCLSFEPKSRPTMDQVVRALQQLQDNLGKPSQ 361
|
Required to activate the resistance responses to necrotrophic pathogens. Phosphorylates FLS2 and BAK1. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49839|APK2A_ARATH Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 152 bits (384), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 166/344 (48%), Gaps = 45/344 (13%)
Query: 33 SEVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRR--------- 83
E+ P+ + FT +LKNAT F +N++ GE V+KG ++
Sbjct: 63 GEILSSPNLKAFTFNELKNATKNFRQDNLL---GEGGFGCVFKGWIDQTSLTASRPGSGI 119
Query: 84 -IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 142
+AVK+ + +++L E +GQL + L L+G C EG+ RLLV E+MP +L
Sbjct: 120 VVAVKQLKPEGFQGHKEWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLEN 179
Query: 143 HLFHWETHPMKWAMRLRVVLHLAQALEYC-TSKGRALYHDLNAYRILFDEDGNPRLSTFG 201
HLF P+ WA+R++V + A+ L + +K + +Y D A IL D D N +LS FG
Sbjct: 180 HLFRRGAQPLTWAIRMKVAVGAAKGLTFLHEAKSQVIYRDFKAANILLDADFNAKLSDFG 239
Query: 202 LMKN--SRDGKSYSTNL----AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH 255
L K + D ST + + PEY+ TGR+T +S +YSFG +LL+L+SG+
Sbjct: 240 LAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGR-----R 294
Query: 256 ALD-----------------LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 298
A+D L R L + D+ L GQ+ LA +CL + +
Sbjct: 295 AMDNSNGGNEYSLVDWATPYLGDKRKLFRIMDTKLGGQYPQKGAFTAANLALQCLNPDAK 354
Query: 299 ERPNPKSLVTALSPLQKETEVPS-HVLMGIP--HSASVSPLSPL 339
RP ++ L L+ + + H M P H +SV SP+
Sbjct: 355 LRPKMSEVLVTLEQLESVAKPGTKHTQMESPRFHHSSVMQKSPV 398
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49840|APK2B_ARATH Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1 | Back alignment and function description |
|---|
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 156/322 (48%), Gaps = 36/322 (11%)
Query: 22 LEAPDVENDEMSEVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQ 81
L P E + +S P+ + FT +LKNAT F ++++ E G V+KG ++
Sbjct: 53 LPTPRTEGEILSS----PNLKAFTFNELKNATRNFRPDSLLGEGGF---GYVFKGWIDGT 105
Query: 82 RR----------IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131
+AVK+ + +++L E +GQL + L L+G C EG+ RLLV
Sbjct: 106 TLTASKPGSGIVVAVKKLKTEGYQGHKEWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLV 165
Query: 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYC-TSKGRALYHDLNAYRILFD 190
E+MP +L HLF P+ WA+R++V + A+ L + +K + +Y D A IL D
Sbjct: 166 YEFMPKGSLENHLFRRGAQPLTWAIRMKVAIGAAKGLTFLHDAKSQVIYRDFKAANILLD 225
Query: 191 EDGNPRLSTFGLMKNSRDGKS--YSTNL----AFTPPEYLRTGRVTPESVIYSFGTLLLD 244
+ N +LS FGL K G ST + + PEY+ TGR+T +S +YSFG +LL+
Sbjct: 226 AEFNSKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLE 285
Query: 245 LLSGKHIPPSHALDLIRD------------RNLQMLTDSCLEGQFTDDDGTELVRLASRC 292
LLSG+ + + + R L + D+ L GQ+ LA +C
Sbjct: 286 LLSGRRAVDKSKVGMEQSLVDWATPYLGDKRKLFRIMDTRLGGQYPQKGAYTAASLALQC 345
Query: 293 LQYEPRERPNPKSLVTALSPLQ 314
L + + RP ++ L L+
Sbjct: 346 LNPDAKLRPKMSEVLAKLDQLE 367
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 491 | ||||||
| 225454188 | 491 | PREDICTED: probable serine/threonine-pro | 1.0 | 1.0 | 0.883 | 0.0 | |
| 356520418 | 491 | PREDICTED: probable serine/threonine-pro | 1.0 | 1.0 | 0.857 | 0.0 | |
| 356504529 | 491 | PREDICTED: probable serine/threonine-pro | 0.991 | 0.991 | 0.858 | 0.0 | |
| 224127648 | 491 | predicted protein [Populus trichocarpa] | 1.0 | 1.0 | 0.851 | 0.0 | |
| 255541562 | 493 | receptor protein kinase, putative [Ricin | 1.0 | 0.995 | 0.855 | 0.0 | |
| 224064025 | 491 | predicted protein [Populus trichocarpa] | 1.0 | 1.0 | 0.843 | 0.0 | |
| 225426412 | 488 | PREDICTED: probable serine/threonine-pro | 0.993 | 1.0 | 0.840 | 0.0 | |
| 357507281 | 492 | hypothetical protein MTR_7g077150 [Medic | 1.0 | 0.997 | 0.829 | 0.0 | |
| 297814269 | 490 | kinase family protein [Arabidopsis lyrat | 0.987 | 0.989 | 0.831 | 0.0 | |
| 22328189 | 489 | BR-signaling kinase 3 [Arabidopsis thali | 0.983 | 0.987 | 0.832 | 0.0 |
| >gi|225454188|ref|XP_002272416.1| PREDICTED: probable serine/threonine-protein kinase At5g41260 [Vitis vinifera] gi|297745267|emb|CBI40347.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 922 bits (2384), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/491 (88%), Positives = 459/491 (93%)
Query: 1 MGIQCSKFTACCWNSQFKATVLEAPDVENDEMSEVDGLPSFREFTLEQLKNATSGFAVEN 60
MG QCSK CCW+SQFK +VLEAPDV+N E SEVD LP F E+T EQLKNATSGFAVEN
Sbjct: 1 MGCQCSKLAPCCWDSQFKGSVLEAPDVDNGEKSEVDYLPVFCEYTFEQLKNATSGFAVEN 60
Query: 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLG 120
IVSEHGEKAPNVVYKGKLENQRRIAVKRFNR+AWPD RQF EEAR+VGQLRN+RL NLLG
Sbjct: 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRVAWPDARQFSEEARAVGQLRNHRLANLLG 120
Query: 121 CCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180
CCCE +ERLLVAEYMPNETLAKHLFHWET PMKWAMRLRVVLHLAQALEYCT +GRALYH
Sbjct: 121 CCCEDNERLLVAEYMPNETLAKHLFHWETQPMKWAMRLRVVLHLAQALEYCTGRGRALYH 180
Query: 181 DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
DLNAYRILFDEDGNPRLS FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT
Sbjct: 181 DLNAYRILFDEDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT+DDGTELVRLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTNDDGTELVRLASRCLQYEPRER 300
Query: 301 PNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISY 360
PNPKSLV AL+PLQKETEVPSHVLMGIPHSAS SPLSPLGEACSR DLTAIHEILE + Y
Sbjct: 301 PNPKSLVAALTPLQKETEVPSHVLMGIPHSASFSPLSPLGEACSRMDLTAIHEILESVGY 360
Query: 361 KDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVY 420
KDDEG+ NELSFQMWTDQMQETLNSKKKGD AFRQKD + AI+CYTQFID GTMVSPTV
Sbjct: 361 KDDEGMTNELSFQMWTDQMQETLNSKKKGDAAFRQKDFRAAIDCYTQFIDVGTMVSPTVC 420
Query: 421 ARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTL 480
ARRSLCYLMSDMPQ+ALNDAMQAQ+ISP+WHIASYLQAAAL+ +GMENEAQ ALK+GTTL
Sbjct: 421 ARRSLCYLMSDMPQEALNDAMQAQVISPVWHIASYLQAAALTGLGMENEAQAALKDGTTL 480
Query: 481 EAKKNSTAGQK 491
EA++N+ +GQK
Sbjct: 481 EAQRNTPSGQK 491
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356520418|ref|XP_003528859.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 903 bits (2333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/491 (85%), Positives = 455/491 (92%)
Query: 1 MGIQCSKFTACCWNSQFKATVLEAPDVENDEMSEVDGLPSFREFTLEQLKNATSGFAVEN 60
MGIQCS+ CC +SQ KA+V+E PD E ++ SEV P+FRE+TLEQLKNATSGFAVEN
Sbjct: 1 MGIQCSRLIPCCVDSQVKASVIETPDAEIEDSSEVSNWPTFREYTLEQLKNATSGFAVEN 60
Query: 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLG 120
IVSEHGEKAPNVVYKGKLENQ RIAVKRFNR AWPD RQFLEEARSVGQLRN RL NLLG
Sbjct: 61 IVSEHGEKAPNVVYKGKLENQMRIAVKRFNRNAWPDARQFLEEARSVGQLRNQRLANLLG 120
Query: 121 CCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180
CCCEG+ERLLVAEYMPNETLAKHLFHWET PMKWAMRLRVVLHLAQALEYCTSKGRALYH
Sbjct: 121 CCCEGEERLLVAEYMPNETLAKHLFHWETQPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180
Query: 181 DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
DLNAYR+LFDEDGNPRLS+FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT
Sbjct: 181 DLNAYRVLFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALD+IR RNLQMLTDSCLEGQF+DDDGTELVRLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDVIRGRNLQMLTDSCLEGQFSDDDGTELVRLASRCLQYEPRER 300
Query: 301 PNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISY 360
PNPKSLV AL+PLQKETEVPSHVLMGI HS + + LSPLGEACSR+DLTAI E+LE I Y
Sbjct: 301 PNPKSLVVALAPLQKETEVPSHVLMGIQHSTTFASLSPLGEACSRKDLTAIQEVLESIGY 360
Query: 361 KDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVY 420
KDDEGVANELSF MWTDQMQ+TLN KKKGDVAFRQKD + AIECY+QFIDAGTMVSPTVY
Sbjct: 361 KDDEGVANELSFHMWTDQMQDTLNCKKKGDVAFRQKDFRLAIECYSQFIDAGTMVSPTVY 420
Query: 421 ARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTL 480
ARRSLCYL+SDMPQ++LNDA+QAQI+SP+WHIASYLQ+ AL+ +GMENEAQ ALKEGTT+
Sbjct: 421 ARRSLCYLISDMPQESLNDAIQAQIVSPVWHIASYLQSVALTGLGMENEAQAALKEGTTM 480
Query: 481 EAKKNSTAGQK 491
E+K+N+T QK
Sbjct: 481 ESKRNATPKQK 491
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356504529|ref|XP_003521048.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 898 bits (2320), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/487 (85%), Positives = 452/487 (92%)
Query: 1 MGIQCSKFTACCWNSQFKATVLEAPDVENDEMSEVDGLPSFREFTLEQLKNATSGFAVEN 60
MGIQCS+ CC +SQ KA+V+E PD E ++ SE P+FREFTLEQLKNATSGFAVEN
Sbjct: 1 MGIQCSRLIPCCVDSQVKASVIETPDAEIEDSSEASNWPTFREFTLEQLKNATSGFAVEN 60
Query: 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLG 120
IVSEHGEKAPNVVYKGKLENQ RIAVKRFNR AWPD RQFLEE+RSVGQLRN RL NLLG
Sbjct: 61 IVSEHGEKAPNVVYKGKLENQMRIAVKRFNRNAWPDARQFLEESRSVGQLRNQRLANLLG 120
Query: 121 CCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180
CCCEG+ERLLVAEYMPNETLAKHLFHWET PMKWAMRLRVVLHLAQALEYCTSKGRALYH
Sbjct: 121 CCCEGEERLLVAEYMPNETLAKHLFHWETQPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180
Query: 181 DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
DLNAYR+LFDEDGNPRLS+FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT
Sbjct: 181 DLNAYRVLFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALD+IR RNLQMLTDSCLEGQF+DDDGTELVRLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDVIRGRNLQMLTDSCLEGQFSDDDGTELVRLASRCLQYEPRER 300
Query: 301 PNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISY 360
PNPKSLV AL+PLQKETEV SH+LMGI HS + + LSPLGEACSR+DLTAIHE+LE + Y
Sbjct: 301 PNPKSLVAALAPLQKETEVLSHILMGIQHSTTFASLSPLGEACSRKDLTAIHEVLESLGY 360
Query: 361 KDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVY 420
KDDEGVANELSFQMWTDQMQ+TLN KKKGDVAFRQKD + AIECY+QFID GTMVSPTVY
Sbjct: 361 KDDEGVANELSFQMWTDQMQDTLNCKKKGDVAFRQKDFRLAIECYSQFIDTGTMVSPTVY 420
Query: 421 ARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTL 480
ARRSLCYL+SDMPQ+ALNDAMQA++ISP+WHIASYLQ+ AL+ +GMENEAQ ALKEGTTL
Sbjct: 421 ARRSLCYLISDMPQEALNDAMQAEVISPVWHIASYLQSVALTGLGMENEAQAALKEGTTL 480
Query: 481 EAKKNST 487
E+K+N+T
Sbjct: 481 ESKRNAT 487
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224127648|ref|XP_002320126.1| predicted protein [Populus trichocarpa] gi|222860899|gb|EEE98441.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 897 bits (2319), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/491 (85%), Positives = 453/491 (92%)
Query: 1 MGIQCSKFTACCWNSQFKATVLEAPDVENDEMSEVDGLPSFREFTLEQLKNATSGFAVEN 60
MG QC+K T CC +SQFKA V+E P V N+E SEV+ LP+FREFT EQLKNATSGFAVEN
Sbjct: 1 MGSQCTKLTPCCLDSQFKAAVVEVPSVGNEEKSEVNDLPTFREFTFEQLKNATSGFAVEN 60
Query: 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLG 120
IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD RQFLEEARSVGQLRNNRL NLLG
Sbjct: 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDARQFLEEARSVGQLRNNRLVNLLG 120
Query: 121 CCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180
CCCEGDERLLVAE+MPNETLAKHLFHWET P+KWAMRLRVVLHLA+ALEYCTSKGRALYH
Sbjct: 121 CCCEGDERLLVAEFMPNETLAKHLFHWETQPIKWAMRLRVVLHLAEALEYCTSKGRALYH 180
Query: 181 DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
DLNAYRILFDEDGNP+LS+FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT
Sbjct: 181 DLNAYRILFDEDGNPKLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
LLLD LSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF++DDGTELVRLASRCLQYE RER
Sbjct: 241 LLLDHLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSNDDGTELVRLASRCLQYELRER 300
Query: 301 PNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISY 360
P+ K LV AL+PLQKET+V SH+LMGIPHSAS SPLSP GEAC R+DLTAIHEIL+ I Y
Sbjct: 301 PSLKFLVAALTPLQKETDVASHILMGIPHSASSSPLSPFGEACLRKDLTAIHEILDNIGY 360
Query: 361 KDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVY 420
KDD+GVANELSFQMWTD+MQETLN+KKKGD +F+QKD + AIECYTQFID GTMVSPTV+
Sbjct: 361 KDDQGVANELSFQMWTDEMQETLNTKKKGDASFKQKDFRVAIECYTQFIDVGTMVSPTVF 420
Query: 421 ARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTL 480
ARRSL YLMSDMPQ+ L+DAMQAQ+ISP+WH+ASYLQA AL+ +GMENEA ALKEGT +
Sbjct: 421 ARRSLSYLMSDMPQEGLSDAMQAQVISPVWHVASYLQAVALATLGMENEAHAALKEGTNI 480
Query: 481 EAKKNSTAGQK 491
EAKKN +GQK
Sbjct: 481 EAKKNQDSGQK 491
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255541562|ref|XP_002511845.1| receptor protein kinase, putative [Ricinus communis] gi|223549025|gb|EEF50514.1| receptor protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 895 bits (2314), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/493 (85%), Positives = 457/493 (92%), Gaps = 2/493 (0%)
Query: 1 MGIQCSKFTACCWNSQFKAT-VLEAPD-VENDEMSEVDGLPSFREFTLEQLKNATSGFAV 58
MG CSKF CC +SQFKA V+E PD V N+ SE+D LP+FREFT EQLKNATSGFAV
Sbjct: 1 MGSLCSKFIPCCLDSQFKAAAVVEVPDTVGNEGKSEIDYLPAFREFTFEQLKNATSGFAV 60
Query: 59 ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNL 118
ENIVSEHGEKAPNVVYKGKLENQRRI VKRFNRMAWPD RQFLEEAR VGQLRN+RL NL
Sbjct: 61 ENIVSEHGEKAPNVVYKGKLENQRRIVVKRFNRMAWPDARQFLEEARFVGQLRNHRLANL 120
Query: 119 LGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRAL 178
LGCCCEGDERLLVAEY+PNETLAKHLFHWET PMKWAMRLRV LHLA+ALEYCTSKGRAL
Sbjct: 121 LGCCCEGDERLLVAEYLPNETLAKHLFHWETQPMKWAMRLRVALHLAEALEYCTSKGRAL 180
Query: 179 YHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSF 238
YHDLNAYRILFDEDGNPRLS+FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSF
Sbjct: 181 YHDLNAYRILFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSF 240
Query: 239 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 298
GTLL+DLLSGKHIPP+HALDLIRDRNLQMLTDSCLEGQF++DDGTELVRLASRCLQYE R
Sbjct: 241 GTLLVDLLSGKHIPPNHALDLIRDRNLQMLTDSCLEGQFSNDDGTELVRLASRCLQYELR 300
Query: 299 ERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKI 358
ERP+ KSLV AL+PLQKETEVPSHVLMGIPHSAS+SPLSP+GEACSR+DLTAIHEIL+ +
Sbjct: 301 ERPSSKSLVAALTPLQKETEVPSHVLMGIPHSASLSPLSPIGEACSRKDLTAIHEILDGL 360
Query: 359 SYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT 418
YKDDEGV NELSFQMWTD+MQETL KKKGD AF+QKDL+DAIECYTQFIDAGTMVSPT
Sbjct: 361 GYKDDEGVTNELSFQMWTDEMQETLTFKKKGDSAFKQKDLRDAIECYTQFIDAGTMVSPT 420
Query: 419 VYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGT 478
++ARRSL +LM+DMPQ+ALNDAMQAQ+ISP+WH+ASYLQA AL +GME EAQVALKEGT
Sbjct: 421 LFARRSLSFLMTDMPQEALNDAMQAQVISPVWHVASYLQAVALGVLGMETEAQVALKEGT 480
Query: 479 TLEAKKNSTAGQK 491
LEA+KN+T+ QK
Sbjct: 481 NLEAQKNATSEQK 493
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224064025|ref|XP_002301354.1| predicted protein [Populus trichocarpa] gi|222843080|gb|EEE80627.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 888 bits (2294), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/491 (84%), Positives = 455/491 (92%)
Query: 1 MGIQCSKFTACCWNSQFKATVLEAPDVENDEMSEVDGLPSFREFTLEQLKNATSGFAVEN 60
MG QC+K T CC +SQFKA V+E PDV N++ SEV+ LP+FREFTLEQLKNATSGFAV+N
Sbjct: 1 MGSQCTKLTRCCVDSQFKAAVVEVPDVGNEDKSEVNDLPTFREFTLEQLKNATSGFAVQN 60
Query: 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLG 120
IVSEHGEKAPNVVYKGKLENQRRIAVKRFN+MAWPD RQFLEEARSVGQLR++RL NLLG
Sbjct: 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNKMAWPDARQFLEEARSVGQLRSHRLVNLLG 120
Query: 121 CCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180
CCEGDER+LVAE+M NETLAKHLFHWET P+KW MRLRVVLHLA+ALEYCTSKGRALYH
Sbjct: 121 FCCEGDERVLVAEFMLNETLAKHLFHWETQPIKWPMRLRVVLHLAEALEYCTSKGRALYH 180
Query: 181 DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
DLNAYRILFDEDGNP+LS+FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT
Sbjct: 181 DLNAYRILFDEDGNPKLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF+ DDGTELVRLASRCLQYE RER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSSDDGTELVRLASRCLQYELRER 300
Query: 301 PNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISY 360
P+ KSLV AL+PLQKE +VPSH+LMGIPH AS SPLSP GEACSRRDLTAI+EIL+ I Y
Sbjct: 301 PSLKSLVAALTPLQKENDVPSHILMGIPHGASSSPLSPFGEACSRRDLTAINEILDNIGY 360
Query: 361 KDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVY 420
KDD+GVANELSFQMWTD+MQETLN+KKKGD AF+QKD + AIECYTQFID GTMVSPTV+
Sbjct: 361 KDDQGVANELSFQMWTDEMQETLNTKKKGDSAFKQKDYRIAIECYTQFIDVGTMVSPTVF 420
Query: 421 ARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTL 480
ARRSL YLMSD+PQ+AL+DAMQAQ+ISP+WH+ASYLQA AL+ +GMENEA ALKEGT L
Sbjct: 421 ARRSLSYLMSDLPQEALSDAMQAQVISPVWHVASYLQAVALATLGMENEAHAALKEGTNL 480
Query: 481 EAKKNSTAGQK 491
EA+KN+ +GQK
Sbjct: 481 EAEKNANSGQK 491
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225426412|ref|XP_002270065.1| PREDICTED: probable serine/threonine-protein kinase At5g41260 [Vitis vinifera] gi|297742525|emb|CBI34674.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 876 bits (2263), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/488 (84%), Positives = 444/488 (90%)
Query: 1 MGIQCSKFTACCWNSQFKATVLEAPDVENDEMSEVDGLPSFREFTLEQLKNATSGFAVEN 60
MG QCSKF CCW+S+ K V+E P VEN+E SE D LP+F E+T++QL+ ATSGFA EN
Sbjct: 1 MGCQCSKFWVCCWDSEQKGLVVEPPSVENEENSEADDLPAFHEYTIDQLRMATSGFAAEN 60
Query: 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLG 120
IVSEHGEKAPNVVYKGKLENQRRIAVKRFN+ AWPD RQFLEEARSVGQLRN+RL NLLG
Sbjct: 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNKSAWPDARQFLEEARSVGQLRNHRLANLLG 120
Query: 121 CCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180
CC EGDERLLVAE+MPN+TLAKHLFHWET PMKWAMRLRV L+LAQALEYCTSKGRALYH
Sbjct: 121 CCSEGDERLLVAEFMPNDTLAKHLFHWETQPMKWAMRLRVALYLAQALEYCTSKGRALYH 180
Query: 181 DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
DLNAYRI+FD+DG+PRLS FG+MKNSRDGKSYSTNLAFTPPEYLRTGRVTPESV+YSFGT
Sbjct: 181 DLNAYRIVFDDDGDPRLSCFGMMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALDLIRDRN+QMLTDSCLEGQF+ DDGTELVRLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNIQMLTDSCLEGQFSSDDGTELVRLASRCLQYEPRER 300
Query: 301 PNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISY 360
PNPKSLV AL PLQKETEVPSHVLMG+P S + PLSPLGEAC R DLTAIHEILEK+ Y
Sbjct: 301 PNPKSLVAALIPLQKETEVPSHVLMGMPQSGATLPLSPLGEACLRMDLTAIHEILEKLGY 360
Query: 361 KDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVY 420
KDDEG ELSFQMWT+QMQETLNSKKKGDVAFR KD + AIECYTQFID GTMVSPTV+
Sbjct: 361 KDDEGATTELSFQMWTNQMQETLNSKKKGDVAFRHKDFRAAIECYTQFIDVGTMVSPTVF 420
Query: 421 ARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTL 480
ARRSLCYLMSDMPQ+ALNDA+QAQ+ISPIWHIASYLQA ALSA+G ENE++V LKEG+ L
Sbjct: 421 ARRSLCYLMSDMPQEALNDAVQAQVISPIWHIASYLQAVALSALGRENESEVTLKEGSVL 480
Query: 481 EAKKNSTA 488
E KKN TA
Sbjct: 481 EEKKNKTA 488
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357507281|ref|XP_003623929.1| hypothetical protein MTR_7g077150 [Medicago truncatula] gi|355498944|gb|AES80147.1| hypothetical protein MTR_7g077150 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/492 (82%), Positives = 445/492 (90%), Gaps = 1/492 (0%)
Query: 1 MGIQCSKFTACCWNSQFKATVLEAPDVENDEMSEVDGLPSFREFTLEQLKNATSGFAVEN 60
MGIQCS CC +SQ KA+V E PD EN+ E + PSFREFTLEQL NATSGF VEN
Sbjct: 1 MGIQCSSLVPCCVDSQVKASVPEVPDAENENRIETNDGPSFREFTLEQLNNATSGFNVEN 60
Query: 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLG 120
IVSEHGEKAPNVVYKGK+ENQ RI VKRFNR AWPD RQFLEEARSVGQLR+ RL NLLG
Sbjct: 61 IVSEHGEKAPNVVYKGKMENQTRIVVKRFNRSAWPDARQFLEEARSVGQLRSERLANLLG 120
Query: 121 CCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180
CCCE DERLLVAEYMPNETLAKHLFHW++ PMKWAMRLRVVLHLA+ALEYCTS GRALYH
Sbjct: 121 CCCEDDERLLVAEYMPNETLAKHLFHWDSQPMKWAMRLRVVLHLAEALEYCTSNGRALYH 180
Query: 181 DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
DLNAYR+LFDEDGNPRLS+FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT
Sbjct: 181 DLNAYRVLFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALDLIRDRN+QMLTDSCLEGQF++DDGTELVRLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNIQMLTDSCLEGQFSEDDGTELVRLASRCLQYEPRER 300
Query: 301 PNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSP-LSPLGEACSRRDLTAIHEILEKIS 359
PN KSLV AL+PLQKETEVPSH LMGI HSA++S LSPLG+ACSR+DLTAIHE+LE I
Sbjct: 301 PNTKSLVAALAPLQKETEVPSHSLMGIQHSATISASLSPLGDACSRKDLTAIHEVLENIG 360
Query: 360 YKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTV 419
YKDD+GVANELSFQMWTDQMQ++LN K+KGD AFR KD K AIECYTQFID GTMVSPTV
Sbjct: 361 YKDDDGVANELSFQMWTDQMQDSLNCKQKGDAAFRHKDFKLAIECYTQFIDVGTMVSPTV 420
Query: 420 YARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTT 479
+ARRSLCYL++DMPQ+A+NDAMQAQ+ISP+WHIASYLQ+ +LS +GM NEAQVAL EGTT
Sbjct: 421 HARRSLCYLINDMPQEAMNDAMQAQVISPLWHIASYLQSVSLSGLGMVNEAQVALMEGTT 480
Query: 480 LEAKKNSTAGQK 491
LE K+N+ G+K
Sbjct: 481 LEEKRNTPTGKK 492
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297814269|ref|XP_002875018.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297320855|gb|EFH51277.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/486 (83%), Positives = 447/486 (91%), Gaps = 1/486 (0%)
Query: 1 MGIQCSKFTACCWNSQFKATVLEAPDVENDEMSEVDGLPSFREFTLEQLKNATSGFAVEN 60
MG QCS + CC NS K VLEAP V+N E SE+ +P+FRE+TLEQLK ATSGFAVE
Sbjct: 1 MGGQCSSLSQCCRNSSHKTAVLEAPYVDNGESSEITDVPNFREYTLEQLKAATSGFAVEY 60
Query: 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLG 120
IVSEHGEKAPNVVYKGKLENQ++IAVKRF RMAWPD RQFLEEARSVGQLR+ R+ NLLG
Sbjct: 61 IVSEHGEKAPNVVYKGKLENQKKIAVKRFTRMAWPDARQFLEEARSVGQLRSERMANLLG 120
Query: 121 CCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180
CCCEGDERLLVAE+MPNETLAKHLFHWET PMKW MRLRVVL+LAQALEYCTSKGR LYH
Sbjct: 121 CCCEGDERLLVAEFMPNETLAKHLFHWETQPMKWTMRLRVVLYLAQALEYCTSKGRTLYH 180
Query: 181 DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
DLNAYR+LFDE+ NPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGR+TPESVIYSFGT
Sbjct: 181 DLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITPESVIYSFGT 240
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALDLIRDRNLQ LTDSCL+GQF+D DGTELVRLASRCLQYE RER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNLQTLTDSCLDGQFSDSDGTELVRLASRCLQYEARER 300
Query: 301 PNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISY 360
PN KSLVTAL+PLQK+TEVPSHVLMG+PHS SVSPLSPLGEACSRRDLTA+ EIL+K+ Y
Sbjct: 301 PNTKSLVTALTPLQKDTEVPSHVLMGLPHSGSVSPLSPLGEACSRRDLTAMLEILDKLGY 360
Query: 361 KDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVY 420
KDDEGV NELSFQMWTDQMQE+LNSKKKGDVAFRQKD ++AIECYTQFID G M+SPTV
Sbjct: 361 KDDEGVTNELSFQMWTDQMQESLNSKKKGDVAFRQKDFREAIECYTQFIDGG-MISPTVC 419
Query: 421 ARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTL 480
ARRSLCYLMSDMP++AL+DA+QAQ+ISP+WH+ASYLQ+A+L+ +GME E+Q+ALKEG+ L
Sbjct: 420 ARRSLCYLMSDMPKEALDDAIQAQVISPVWHVASYLQSASLAFLGMEKESQIALKEGSNL 479
Query: 481 EAKKNS 486
EAK+N+
Sbjct: 480 EAKRNA 485
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|22328189|ref|NP_191980.2| BR-signaling kinase 3 [Arabidopsis thaliana] gi|17064838|gb|AAL32573.1| Unknown protein [Arabidopsis thaliana] gi|20259854|gb|AAM13274.1| unknown protein [Arabidopsis thaliana] gi|332656524|gb|AEE81924.1| BR-signaling kinase 3 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 859 bits (2220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/485 (83%), Positives = 443/485 (91%), Gaps = 2/485 (0%)
Query: 1 MGIQCSKFTACCWNSQFKATVLEAPDVENDEMSEVDGLPSFREFTLEQLKNATSGFAVEN 60
MG QCS + CC N+ K VLEAPDV+N E SE+ +P+FRE+TLEQLK ATSGFAVE
Sbjct: 1 MGGQCSSLS-CCRNTSHKTAVLEAPDVDNGESSEITDVPNFREYTLEQLKAATSGFAVEY 59
Query: 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLG 120
IVSEHGEKAPNVVYKGKLENQ++IAVKRF RMAWPD RQFLEEARSVGQLR+ R+ NLLG
Sbjct: 60 IVSEHGEKAPNVVYKGKLENQKKIAVKRFTRMAWPDSRQFLEEARSVGQLRSERMANLLG 119
Query: 121 CCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180
CCCEGDERLLVAE+MPNETLAKHLFHWET PMKW MRLRVVL+LAQALEYCTSKGR LYH
Sbjct: 120 CCCEGDERLLVAEFMPNETLAKHLFHWETQPMKWTMRLRVVLYLAQALEYCTSKGRTLYH 179
Query: 181 DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
DLNAYR+LFDE+ NPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGR+TPESVIYSFGT
Sbjct: 180 DLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITPESVIYSFGT 239
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALDLIRDRNLQ LTDSCL+GQF+D DGTELVRLASRCLQYE RER
Sbjct: 240 LLLDLLSGKHIPPSHALDLIRDRNLQTLTDSCLDGQFSDSDGTELVRLASRCLQYEARER 299
Query: 301 PNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISY 360
PN KSLVTAL+PLQKETEV SHVLMG+PHS SVSPLSPLGEACSRRDLTA+ EILEK+ Y
Sbjct: 300 PNTKSLVTALTPLQKETEVLSHVLMGLPHSGSVSPLSPLGEACSRRDLTAMLEILEKLGY 359
Query: 361 KDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVY 420
KDDEGV NELSF MWTDQMQE+LNSKKKGDVAFRQKD ++AIECYTQFID G M+SPTV
Sbjct: 360 KDDEGVTNELSFHMWTDQMQESLNSKKKGDVAFRQKDFREAIECYTQFIDGG-MISPTVC 418
Query: 421 ARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTL 480
ARRSLCYLMSDMP++AL+DA+QAQ+ISP+WH+ASYLQ+A+L +GME E+Q+ALKEG+ L
Sbjct: 419 ARRSLCYLMSDMPKEALDDAIQAQVISPVWHVASYLQSASLGILGMEKESQIALKEGSNL 478
Query: 481 EAKKN 485
EAK N
Sbjct: 479 EAKMN 483
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 491 | ||||||
| TAIR|locus:2127118 | 489 | BSK3 "brassinosteroid-signalin | 0.983 | 0.987 | 0.832 | 9.8e-222 | |
| TAIR|locus:2031279 | 487 | BSK7 "brassinosteroid-signalin | 0.987 | 0.995 | 0.787 | 6.3e-211 | |
| TAIR|locus:2155115 | 487 | BSK8 "brassinosteroid-signalin | 0.987 | 0.995 | 0.758 | 4.9e-204 | |
| TAIR|locus:2154538 | 489 | BSK5 "brassinosteroid-signalin | 0.979 | 0.983 | 0.741 | 2.6e-198 | |
| TAIR|locus:2084475 | 490 | BSK6 "brassinosteroid-signalin | 0.981 | 0.983 | 0.725 | 2.5e-191 | |
| TAIR|locus:2198160 | 483 | BSK4 "brassinosteroid-signalin | 0.979 | 0.995 | 0.727 | 1.4e-188 | |
| TAIR|locus:2122058 | 512 | BSK1 "brassinosteroid-signalin | 0.910 | 0.873 | 0.653 | 5e-163 | |
| TAIR|locus:2142315 | 489 | BSK2 "brassinosteroid-signalin | 0.985 | 0.989 | 0.580 | 3.6e-153 | |
| TAIR|locus:2083499 | 477 | BSK9 "brassinosteroid-signalin | 0.934 | 0.962 | 0.617 | 5.4e-150 | |
| TAIR|locus:2150074 | 499 | BSK10 "brassinosteroid-signali | 0.977 | 0.961 | 0.572 | 4e-145 |
| TAIR|locus:2127118 BSK3 "brassinosteroid-signaling kinase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2141 (758.7 bits), Expect = 9.8e-222, P = 9.8e-222
Identities = 404/485 (83%), Positives = 443/485 (91%)
Query: 1 MGIQCSKFTACCWNSQFKATVLEAPDVENDEMSEVDGLPSFREFTLEQLKNATSGFAVEN 60
MG QCS + CC N+ K VLEAPDV+N E SE+ +P+FRE+TLEQLK ATSGFAVE
Sbjct: 1 MGGQCSSLS-CCRNTSHKTAVLEAPDVDNGESSEITDVPNFREYTLEQLKAATSGFAVEY 59
Query: 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLG 120
IVSEHGEKAPNVVYKGKLENQ++IAVKRF RMAWPD RQFLEEARSVGQLR+ R+ NLLG
Sbjct: 60 IVSEHGEKAPNVVYKGKLENQKKIAVKRFTRMAWPDSRQFLEEARSVGQLRSERMANLLG 119
Query: 121 CCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180
CCCEGDERLLVAE+MPNETLAKHLFHWET PMKW MRLRVVL+LAQALEYCTSKGR LYH
Sbjct: 120 CCCEGDERLLVAEFMPNETLAKHLFHWETQPMKWTMRLRVVLYLAQALEYCTSKGRTLYH 179
Query: 181 DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
DLNAYR+LFDE+ NPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGR+TPESVIYSFGT
Sbjct: 180 DLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITPESVIYSFGT 239
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALDLIRDRNLQ LTDSCL+GQF+D DGTELVRLASRCLQYE RER
Sbjct: 240 LLLDLLSGKHIPPSHALDLIRDRNLQTLTDSCLDGQFSDSDGTELVRLASRCLQYEARER 299
Query: 301 PNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISY 360
PN KSLVTAL+PLQKETEV SHVLMG+PHS SVSPLSPLGEACSRRDLTA+ EILEK+ Y
Sbjct: 300 PNTKSLVTALTPLQKETEVLSHVLMGLPHSGSVSPLSPLGEACSRRDLTAMLEILEKLGY 359
Query: 361 KDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVY 420
KDDEGV NELSF MWTDQMQE+LNSKKKGDVAFRQKD ++AIECYTQFID G M+SPTV
Sbjct: 360 KDDEGVTNELSFHMWTDQMQESLNSKKKGDVAFRQKDFREAIECYTQFIDGG-MISPTVC 418
Query: 421 ARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTL 480
ARRSLCYLMSDMP++AL+DA+QAQ+ISP+WH+ASYLQ+A+L +GME E+Q+ALKEG+ L
Sbjct: 419 ARRSLCYLMSDMPKEALDDAIQAQVISPVWHVASYLQSASLGILGMEKESQIALKEGSNL 478
Query: 481 EAKKN 485
EAK N
Sbjct: 479 EAKMN 483
|
|
| TAIR|locus:2031279 BSK7 "brassinosteroid-signaling kinase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2039 (722.8 bits), Expect = 6.3e-211, P = 6.3e-211
Identities = 382/485 (78%), Positives = 427/485 (88%)
Query: 1 MGIQCSKFTACCWNSQFKATVLEAPDVENDEMSEVDGLPSFREFTLEQLKNATSGFAVEN 60
MG + SK A C S + + ++ D E + LP FREF++E L+NATSGFA EN
Sbjct: 1 MGCEVSKLCAFCCVSDPEGSNHGVTGLDEDRRGEGNDLPQFREFSIETLRNATSGFATEN 60
Query: 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLG 120
IVSEHGEKAPNVVYKGKL+NQRRIAVKRFNR AWPD RQFLEEA++VGQLRN R+ NLLG
Sbjct: 61 IVSEHGEKAPNVVYKGKLDNQRRIAVKRFNRKAWPDSRQFLEEAKAVGQLRNYRMANLLG 120
Query: 121 CCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180
CC EG+ERLLVAE+MPNETLAKHLFHWE+ PMKWAMRLRV LH+AQALEYCT KGRALYH
Sbjct: 121 CCYEGEERLLVAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTGKGRALYH 180
Query: 181 DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
DLNAYR+LFD+D NPRLS FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESV+YS+GT
Sbjct: 181 DLNAYRVLFDDDSNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVMYSYGT 240
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALDLIRDRN+QML DSCLEGQF+ DDGTEL+RLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNIQMLIDSCLEGQFSSDDGTELIRLASRCLQYEPRER 300
Query: 301 PNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISY 360
PNPKSLVTA+ PLQK+ E PSH LMGIP SAS +PLSPLGEAC R DLTAIHEILEK+SY
Sbjct: 301 PNPKSLVTAMIPLQKDLETPSHQLMGIPSSASTTPLSPLGEACLRTDLTAIHEILEKLSY 360
Query: 361 KDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVY 420
KDDEG A ELSFQMWT+QMQ++LN KKKGDVAFR K+ +AI+CY+QFI+ GTMVSPTVY
Sbjct: 361 KDDEGAATELSFQMWTNQMQDSLNFKKKGDVAFRHKEFANAIDCYSQFIEGGTMVSPTVY 420
Query: 421 ARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTL 480
ARRSLCYLM++MPQ+ALNDAMQAQ+ISP WHIASYLQA ALSA+G ENEA ALK+G+ L
Sbjct: 421 ARRSLCYLMNEMPQEALNDAMQAQVISPAWHIASYLQAVALSALGQENEAHAALKDGSML 480
Query: 481 EAKKN 485
E+K+N
Sbjct: 481 ESKRN 485
|
|
| TAIR|locus:2155115 BSK8 "brassinosteroid-signaling kinase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1974 (699.9 bits), Expect = 4.9e-204, P = 4.9e-204
Identities = 368/485 (75%), Positives = 422/485 (87%)
Query: 1 MGIQCSKFTACCWNSQFKATVLEAPDVENDEMSEVDGLPSFREFTLEQLKNATSGFAVEN 60
MG + SK +A C S+ + + ++ + E + LP FREF++E ++NATSGFA EN
Sbjct: 1 MGCEVSKLSALCCVSESGRSNPDVTGLDEEGRGESNDLPQFREFSIETIRNATSGFAAEN 60
Query: 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLG 120
IVSEHGE+APNVVYKGKLENQRRIAVKRFNR +WPD RQFLEEA++VGQLRN+R+ NLLG
Sbjct: 61 IVSEHGERAPNVVYKGKLENQRRIAVKRFNRKSWPDSRQFLEEAKAVGQLRNHRMANLLG 120
Query: 121 CCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180
CC E +ERLL+AE+MPNETLAKHLFHWE+ PMKWAMRLRV LH+AQALEYCTSKGRALYH
Sbjct: 121 CCYEDEERLLIAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGRALYH 180
Query: 181 DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
DLNAYR+LFD+D NPRLS FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT
Sbjct: 181 DLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALDLIRDRN+QML DS LEGQF+ DDGTEL+RLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNIQMLMDSGLEGQFSSDDGTELIRLASRCLQYEPRER 300
Query: 301 PNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISY 360
PNPKSLV+A+ PLQK+ E+ SH L+G+P+SA+ + LSPLGEAC R DLTAIHEI+EK+ Y
Sbjct: 301 PNPKSLVSAMIPLQKDLEIASHQLLGVPNSATTTALSPLGEACLRSDLTAIHEIIEKLGY 360
Query: 361 KDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVY 420
KDDEG ELSFQMWTDQMQ+TL KKKGD AFR KD AIECY+QFI+ GTM SPTV+
Sbjct: 361 KDDEGATTELSFQMWTDQMQDTLVFKKKGDSAFRHKDFAKAIECYSQFIEVGTMGSPTVH 420
Query: 421 ARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTL 480
AR+SLCYLM+DMP++ALN+AMQAQ+ISP WHIASYLQA ALSA+G ENEA ALK+G L
Sbjct: 421 ARQSLCYLMNDMPREALNNAMQAQVISPAWHIASYLQAVALSALGQENEAHTALKDGAML 480
Query: 481 EAKKN 485
E+K+N
Sbjct: 481 ESKRN 485
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| TAIR|locus:2154538 BSK5 "brassinosteroid-signaling kinase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1920 (680.9 bits), Expect = 2.6e-198, P = 2.6e-198
Identities = 364/491 (74%), Positives = 423/491 (86%)
Query: 1 MGIQCSKFTACCWNSQFKATVLEAPDVENDEMSEVDGLPSFREFTLEQLKNATSGFAVEN 60
MG +CSK + C W + K+T EA D++N D LPSF EF+ +QL+ AT GF+ ++
Sbjct: 1 MGPRCSKLSLCWWPTHLKSTHNEASDLDNG----TDDLPSFTEFSFDQLRAATCGFSTDS 56
Query: 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLG 120
IVSEHG KAPNVVYKG+LE+ R IAVKRFNR AWPD RQFLEEA++VGQLRN RL NL+G
Sbjct: 57 IVSEHGVKAPNVVYKGRLEDDRWIAVKRFNRSAWPDTRQFLEEAKAVGQLRNERLANLIG 116
Query: 121 CCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180
CCEGDERLLVAE+MP ETL+KHLFHW++ PMKW+MRLRV L+LAQALEYC+SKGRALYH
Sbjct: 117 FCCEGDERLLVAEFMPFETLSKHLFHWDSQPMKWSMRLRVALYLAQALEYCSSKGRALYH 176
Query: 181 DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
DLNAYRILFD+DGNPRLS FGLMKNSRDGKSYSTNLAFTPPEYLRTGRV PESV+YSFGT
Sbjct: 177 DLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGT 236
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALDLIR +N ML DSCL+G F++DDGT+LVRLASRCLQYE RER
Sbjct: 237 LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLDGHFSNDDGTDLVRLASRCLQYEARER 296
Query: 301 PNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSP-----LSPLGEACSRRDLTAIHEIL 355
PN KSLV++L+PLQKET++PSHVLMGIPH A+ SP L+PLG+ACSR DLTAIHEIL
Sbjct: 297 PNVKSLVSSLAPLQKETDIPSHVLMGIPHGAA-SPKETTSLTPLGDACSRHDLTAIHEIL 355
Query: 356 EKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV 415
EK+ YKDDEGVANELSFQ+WTDQ+QETLNSKK+GD AF+ KD A+ECYTQFI+ GTMV
Sbjct: 356 EKVGYKDDEGVANELSFQVWTDQIQETLNSKKQGDAAFKGKDFVTAVECYTQFIEDGTMV 415
Query: 416 SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALK 475
SPTV+ARR LCYLMS+MPQ+AL DAMQAQ++SP W A YLQAAAL ++GM+ +A LK
Sbjct: 416 SPTVFARRCLCYLMSNMPQEALGDAMQAQVVSPEWPTAFYLQAAALFSLGMDKDACETLK 475
Query: 476 EGTTLEAKKNS 486
+GT+LEAKK++
Sbjct: 476 DGTSLEAKKHN 486
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| TAIR|locus:2084475 BSK6 "brassinosteroid-signaling kinase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1854 (657.7 bits), Expect = 2.5e-191, P = 2.5e-191
Identities = 357/492 (72%), Positives = 420/492 (85%)
Query: 1 MGIQCSKFTACCWNSQFK-ATVLEAPDVENDEMSEVDGLPSFREFTLEQLKNATSGFAVE 59
MG +CSKF+ C + S FK A+VLE+PD+EN +V P+F+EF LEQLK+AT GF+ +
Sbjct: 1 MGARCSKFSFCLFPSHFKSASVLESPDIENG--GKV--WPTFKEFKLEQLKSATGGFSSD 56
Query: 60 NIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL 119
NIVSEHGEKAPNVVY+G+L++ R IAVKRFNR+AW D RQFL+EA++VG LR++RL NL+
Sbjct: 57 NIVSEHGEKAPNVVYRGRLDDGRLIAVKRFNRLAWADHRQFLDEAKAVGSLRSDRLANLI 116
Query: 120 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 179
GCC EG+ERLLVAE+MP+ETLAKHLFHWE +PMKWAMRLRV L LAQALEYC++KGRALY
Sbjct: 117 GCCFEGEERLLVAEFMPHETLAKHLFHWENNPMKWAMRLRVALCLAQALEYCSNKGRALY 176
Query: 180 HDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFG 239
HDLNAYR+LFD+DGNPRLS FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESV++SFG
Sbjct: 177 HDLNAYRVLFDKDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVFSFG 236
Query: 240 TLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 299
T+LLDL+SGKHIPPSHALDLIR +N ML DS LEG F+++DGTELVRLA+RCLQYE RE
Sbjct: 237 TVLLDLMSGKHIPPSHALDLIRGKNCAMLMDSALEGHFSNEDGTELVRLATRCLQYEARE 296
Query: 300 RPNPKSLVTALSPLQKETEVPSHVLMGIPHSASV---SPLS--PLGEACSRRDLTAIHEI 354
RPN KSLVT+L LQKE++V S+VLMGIPH SPLS P G+AC R DLTAI EI
Sbjct: 297 RPNVKSLVTSLVTLQKESDVASYVLMGIPHETEAEEESPLSLTPFGDACLRVDLTAIQEI 356
Query: 355 LEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTM 414
L KI YKDDEG+ANELSFQMWT+QMQE+LNSKK+GD+AFR KD A++CYTQFID GTM
Sbjct: 357 LSKIGYKDDEGIANELSFQMWTNQMQESLNSKKQGDLAFRSKDFTTAVDCYTQFIDGGTM 416
Query: 415 VSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVAL 474
VSPTV+ARR L YLM+D Q+AL DA+QAQ++SP W A YLQAA L +GME +AQ AL
Sbjct: 417 VSPTVHARRCLSYLMNDNAQEALTDALQAQVVSPDWPTALYLQAACLFKLGMEADAQQAL 476
Query: 475 KEGTTLEAKKNS 486
K+GTTLEAKK++
Sbjct: 477 KDGTTLEAKKSN 488
|
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| TAIR|locus:2198160 BSK4 "brassinosteroid-signaling kinase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1828 (648.5 bits), Expect = 1.4e-188, P = 1.4e-188
Identities = 357/491 (72%), Positives = 411/491 (83%)
Query: 1 MGIQCSKFTACCWNSQFKATVLEAPDVENDEMSEVDGLPSFREFTLEQLKNATSGFAVEN 60
MG Q SK CC K T LEAPDVEN E EV+G+ SFRE++LEQLK ATS FA+EN
Sbjct: 1 MGGQSSKIGTCC---SHKTTALEAPDVENKENGEVNGVHSFREYSLEQLKIATSCFALEN 57
Query: 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLG 120
+VSEHGE APNVVY+GKLEN +IA+KRF+ AWPDPRQFLEEAR VGQLR+ R+ NLLG
Sbjct: 58 VVSEHGETAPNVVYQGKLENHMKIAIKRFSGTAWPDPRQFLEEARLVGQLRSKRMANLLG 117
Query: 121 CCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180
CCEG ERLLVAE+MPNETLAKHLFHW+T PMKWAMRLRV L++++ALEYC++ G LYH
Sbjct: 118 YCCEGGERLLVAEFMPNETLAKHLFHWDTEPMKWAMRLRVALYISEALEYCSNNGHTLYH 177
Query: 181 DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
DLNAYR+LFDE+ NPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGR+T ESVIYSFGT
Sbjct: 178 DLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITAESVIYSFGT 237
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
LLLDLL+GKHIPPSHALDLIRDRNLQ LTDSCLEGQF+D DGTELVRL S CLQYE RER
Sbjct: 238 LLLDLLTGKHIPPSHALDLIRDRNLQTLTDSCLEGQFSDSDGTELVRLTSCCLQYEARER 297
Query: 301 PNPKSLVTALSPLQKETEVPSHVLMGIPHSAS-VSPLSPLGEACSRRDLTAIHEILEKIS 359
PN KSLVTAL LQK+TEV SHVLMG+P S + SP SP EACS +DLT++ EILEKI
Sbjct: 298 PNIKSLVTALISLQKDTEVLSHVLMGLPQSGTFASPPSPFAEACSGKDLTSMVEILEKIG 357
Query: 360 YKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTV 419
YKDDE +LSF MWT+QMQE +NSKKKGD+AFR+KD +AIE YTQF+D G M+S TV
Sbjct: 358 YKDDE----DLSF-MWTEQMQEAINSKKKGDIAFRRKDFSEAIEFYTQFLDLG-MISATV 411
Query: 420 YARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTT 479
RRS YLMS+M ++AL+DAM+AQ ISP+W++A YLQ+AALS +GME E+Q+AL EG+
Sbjct: 412 LVRRSQSYLMSNMAKEALDDAMKAQGISPVWYVALYLQSAALSVLGMEKESQIALTEGSI 471
Query: 480 LEAKKNSTAGQ 490
LEA+K S + Q
Sbjct: 472 LEARKISASTQ 482
|
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| TAIR|locus:2122058 BSK1 "brassinosteroid-signaling kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1587 (563.7 bits), Expect = 5.0e-163, P = 5.0e-163
Identities = 296/453 (65%), Positives = 366/453 (80%)
Query: 37 GLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD 96
G+PSF EF+ LK AT+ F+ +NIVSE GEKAPN+VYKG+L+N+R IAVK+F +MAWP+
Sbjct: 54 GIPSFSEFSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQNRRWIAVKKFTKMAWPE 113
Query: 97 PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAM 156
P+QF EEA VG+LR+NRL NL+G CC+GDERLLVAE+MPN+TLAKHLFHWE ++WAM
Sbjct: 114 PKQFAEEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAM 173
Query: 157 RLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL 216
RLRV ++A+AL+YC+++GR LYHDLNAYR+LFDEDG+PRLS FGLMKNSRDGKSYSTNL
Sbjct: 174 RLRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNL 233
Query: 217 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 276
A+TPPEYLR GRVTPESV YSFGT+LLDLLSGKHIPPSHALD+IR +N+ +L DS LEG+
Sbjct: 234 AYTPPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHLEGK 293
Query: 277 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPH-----SA 331
F+ ++ T +V LAS+CLQYEPRERPN K LV L+PLQ +++VPS+V++GI S
Sbjct: 294 FSTEEATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQEEAPST 353
Query: 332 SVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDV 391
PLSPLGEACSR DLTAIH+IL Y+DDEG NELSFQ WT QM++ L+++K+GD
Sbjct: 354 PQRPLSPLGEACSRMDLTAIHQILVMTHYRDDEGT-NELSFQEWTQQMKDMLDARKRGDQ 412
Query: 392 AFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH 451
+FR+KD K AI+CY+QFID GTMVSPTV+ RRSLCYL+ D P AL DAMQAQ + P W
Sbjct: 413 SFREKDFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCVYPDWP 472
Query: 452 IASYLQAAALSAMGMENEAQVALKEGTTLEAKK 484
A Y+Q+ AL+ + M +A L E LE K+
Sbjct: 473 TAFYMQSVALAKLNMNTDAADMLNEAAQLEEKR 505
|
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| TAIR|locus:2142315 BSK2 "brassinosteroid-signaling kinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1494 (531.0 bits), Expect = 3.6e-153, P = 3.6e-153
Identities = 284/489 (58%), Positives = 371/489 (75%)
Query: 1 MGIQCSKFTACCWNSQFKATVLEAPDVENDEMSEVDGLPSFREFTLEQLKNATSGFAVEN 60
MG SK TA +S + + V D++ + + +F+EF L +L+ AT+GF+
Sbjct: 1 MGCLHSK-TANLPSSDDPSAPNKPESVNGDQVDQE--IQNFKEFELNELRKATNGFSPSC 57
Query: 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLG 120
IVSE GEKAPNVVY+GKLE +A+KRF+R +WPD +QF+ EA VG+LRN R+ +L+G
Sbjct: 58 IVSEGGEKAPNVVYRGKLEGNHLVAIKRFSRQSWPDAQQFVVEATGVGKLRNKRIVSLIG 117
Query: 121 CCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180
CC EGDERLLVAEYMPN+TL+KHLFHWE P+ W MR+R+ ++A+AL+YC + R +YH
Sbjct: 118 CCAEGDERLLVAEYMPNDTLSKHLFHWEKQPLPWDMRVRIADYIAEALDYCNIENRKIYH 177
Query: 181 DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
DLNAYRILFDE+G+PRLSTFGLMKNSRDGKSYSTNLA+TPPE+LRTGRV PESVI+S+GT
Sbjct: 178 DLNAYRILFDEEGDPRLSTFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVIFSYGT 237
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
+LLDLLSGKHIPPSHALD+IR +N +L DS LEGQ+ +DD T+LV LAS+CLQ E ++R
Sbjct: 238 ILLDLLSGKHIPPSHALDIIRGKNALLLMDSSLEGQYANDDATKLVDLASKCLQSEAKDR 297
Query: 301 PNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSP--LSPLGEACSRRDLTAIHEILEKI 358
P+ K L++A++PLQK+ EV SHVLMG+P + + P LSPLG+AC++ DL H+IL K
Sbjct: 298 PDTKFLLSAVAPLQKQEEVASHVLMGLPKNTVILPTMLSPLGKACAKMDLATFHDILLKT 357
Query: 359 SYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT 418
Y+D+EG NELSFQ WT Q+QE LN+KK GD+AFR KD K++IE Y++ + + S T
Sbjct: 358 GYRDEEGAENELSFQEWTQQVQEMLNTKKFGDIAFRDKDFKNSIEYYSKLVGMMPVPSAT 417
Query: 419 VYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGT 478
V+ARR+ YLM+D + AL DAMQAQ+ P W A YLQA ALS +GME +AQ L +G
Sbjct: 418 VFARRAFSYLMTDQQELALRDAMQAQVCIPEWPTAFYLQALALSKLGMETDAQDMLNDGA 477
Query: 479 TLEAKKNST 487
+AK+ ++
Sbjct: 478 AYDAKRQNS 486
|
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| TAIR|locus:2083499 BSK9 "brassinosteroid-signaling kinase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1464 (520.4 bits), Expect = 5.4e-150, P = 5.4e-150
Identities = 291/471 (61%), Positives = 354/471 (75%)
Query: 21 VLEAPDVENDEMSEVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLEN 80
VL A + E DE S P+F EF+LEQL+ AT GF+ +NIVSEH E+ PN+VYKG+L +
Sbjct: 9 VLAADNKEEDEGSTC---PNFLEFSLEQLRVATDGFSADNIVSEHNERVPNIVYKGQLND 65
Query: 81 QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL 140
R+IAVKRF R++WPD +F+EEA++VG+ R+ + NL+GCC EG ERLLVAEYMPNETL
Sbjct: 66 GRKIAVKRFQRLSWPDSLEFIEEAQAVGRCRSEHMANLIGCCSEGHERLLVAEYMPNETL 125
Query: 141 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 200
AKHLFHWE PMKW MRLRV LH A ALEYC G LYHDLN YRILFD+ GNPRLS F
Sbjct: 126 AKHLFHWEKRPMKWEMRLRVALHTATALEYCNDWGIDLYHDLNTYRILFDKVGNPRLSCF 185
Query: 201 GLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI 260
GLMK SR+GKSYSTNLAF PPEYLR G V PESV +SFGTLLLDL+SG+HIPP+HALDL
Sbjct: 186 GLMKCSREGKSYSTNLAFAPPEYLRLGTVIPESVTFSFGTLLLDLMSGRHIPPNHALDLF 245
Query: 261 RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV- 319
R +N +L DS L+GQF+D+D TEL+ LASRCL+ EP ERP+ K L++ALS L+K E+
Sbjct: 246 RGKNYLVLMDSALDGQFSDEDRTELIHLASRCLRPEPDERPSIKFLMSALSRLEKRAELW 305
Query: 320 PSHVLMGIPHSASVSP-------LSPLGEACSRRDLTAIHEILEKISY-KDDEGVANELS 371
P+ IP + P L+P GEAC R DL+ +HE+LEK+ Y +DD V NE S
Sbjct: 306 PNVKEENIPTPSYTEPATKEPLPLTPFGEACWRVDLSGMHELLEKLGYGEDDVVVTNEFS 365
Query: 372 FQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD 431
FQMWT QMQE ++ KK GD AFR KD + AIE YT+F+ +VSPTV ARR LCYLMSD
Sbjct: 366 FQMWTGQMQENMDYKKHGDAAFRAKDFETAIEFYTEFMSGAPVVSPTVLARRCLCYLMSD 425
Query: 432 MPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEA 482
M ++AL+DAMQ Q+ SP + IA YLQAA L +GME EA+ AL+ G++LEA
Sbjct: 426 MFREALSDAMQTQVASPEFSIALYLQAACLLKLGMEAEAKEALRHGSSLEA 476
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| TAIR|locus:2150074 BSK10 "brassinosteroid-signaling kinase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1418 (504.2 bits), Expect = 4.0e-145, P = 4.0e-145
Identities = 286/500 (57%), Positives = 360/500 (72%)
Query: 1 MGIQCSK-FTACCWNSQFKATVLEAPDVEN--DEMSEVDG--LPS-FREFTLEQLKNATS 54
MG C K + + +TV++ D+EN + ++ DG P FREF+LEQL+ AT
Sbjct: 1 MGCICFKSWRRSSSSPSITSTVID--DLENVREYDADDDGGHYPLIFREFSLEQLRIATD 58
Query: 55 GFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNR 114
GF+ NIVSEH + PN+VYKGKL + RRIAVKRF R++WPDP +F+ EA++VG+LR+
Sbjct: 59 GFSAGNIVSEHNDSVPNIVYKGKLGDGRRIAVKRFQRLSWPDPFEFINEAQAVGRLRSEH 118
Query: 115 LTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK 174
+ NL+GCCC+ +ERLLVAEYMPN TLAKHLFHWE PMKW MRL+V LH A+ALEYC K
Sbjct: 119 MANLIGCCCDDNERLLVAEYMPNGTLAKHLFHWEKRPMKWEMRLKVALHTARALEYCNDK 178
Query: 175 GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESV 234
G LYHDLN YRI+FD+ G P+LS FGLMKNS +GK YSTNLAF PPEYLR G V ESV
Sbjct: 179 GIDLYHDLNPYRIMFDKTGIPKLSCFGLMKNSHEGKIYSTNLAFAPPEYLRLGTVIAESV 238
Query: 235 IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 294
+SFGTLLLDL+SG+HIPP+HALDL R +N +L DS L+GQF+D+D TEL+ +ASRC +
Sbjct: 239 TFSFGTLLLDLMSGRHIPPNHALDLFRGKNYLVLMDSALDGQFSDEDRTELIHVASRCFK 298
Query: 295 YEPRERPNPKSLVTALSPLQKETEV-PSHVLMGI-PHSASV----SP------LSPLGEA 342
EP ERP+ K L LS LQK ++ P +V + P S ++ P L+P G+A
Sbjct: 299 TEPEERPSIKFLKATLSRLQKRAKLCPINVKRPMSPPSKNLPEKTKPATESLKLTPFGDA 358
Query: 343 CSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAI 402
CSR DL++IHE+LEK+ Y++D GV NE SFQMWT +MQE ++ KK GD AF KD AI
Sbjct: 359 CSRADLSSIHELLEKLGYEEDNGVGNEFSFQMWTGEMQENMDYKKHGDAAFLAKDFDTAI 418
Query: 403 ECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 462
E YT+F+ VSPTV ARR LCYLM++M +AL+DAMQAQ+ SP W I YLQAA L
Sbjct: 419 EFYTEFMTGAPTVSPTVLARRCLCYLMTEMFSEALSDAMQAQVASPEWPIPLYLQAACLF 478
Query: 463 AMGMENEAQVALKEGTTLEA 482
+ ME EA+ AL+ G+ LEA
Sbjct: 479 KLEMEAEAKEALRHGSALEA 498
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9FHD7 | Y5126_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.7587 | 0.9877 | 0.9958 | no | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00026835001 | SubName- Full=Chromosome chr15 scaffold_40, whole genome shotgun sequence; (491 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 491 | |||
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 5e-29 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 6e-23 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 4e-22 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 4e-22 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 3e-21 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 3e-21 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 2e-19 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 4e-19 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 6e-17 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 3e-16 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 3e-15 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 1e-14 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 1e-14 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 5e-14 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 4e-13 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 4e-12 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 7e-12 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 9e-12 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 2e-11 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 3e-11 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 3e-11 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 3e-11 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 4e-11 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 5e-11 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 6e-11 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 7e-11 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 7e-11 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 8e-11 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 2e-10 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-10 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 4e-10 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 1e-09 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 1e-09 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 1e-09 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 2e-09 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 2e-09 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 3e-09 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 3e-09 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 7e-09 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 9e-09 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 9e-09 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 1e-08 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 2e-08 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 2e-08 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 2e-08 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 4e-08 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 5e-08 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 6e-08 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 8e-08 | |
| pfam13414 | 69 | pfam13414, TPR_11, TPR repeat | 9e-08 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 2e-07 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 2e-07 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 3e-07 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 3e-07 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 4e-07 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 5e-07 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 5e-07 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 6e-07 | |
| cd00189 | 100 | cd00189, TPR, Tetratricopeptide repeat domain; typ | 6e-07 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 7e-07 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 8e-07 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 8e-07 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 1e-06 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 1e-06 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 2e-06 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 2e-06 | |
| cd05076 | 274 | cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do | 2e-06 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 3e-06 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 3e-06 | |
| cd05077 | 262 | cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do | 3e-06 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 4e-06 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 4e-06 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 5e-06 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 9e-06 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 1e-05 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 1e-05 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 1e-05 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 1e-05 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 1e-05 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 1e-05 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 1e-05 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 1e-05 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 2e-05 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 2e-05 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 2e-05 | |
| cd05102 | 338 | cd05102, PTKc_VEGFR3, Catalytic domain of the Prot | 2e-05 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 2e-05 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 2e-05 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 3e-05 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 3e-05 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 3e-05 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 4e-05 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 4e-05 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 5e-05 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 5e-05 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 5e-05 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 6e-05 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 6e-05 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 6e-05 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 7e-05 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 7e-05 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 1e-04 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 1e-04 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 2e-04 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 2e-04 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 2e-04 | |
| cd05621 | 370 | cd05621, STKc_ROCK2, Catalytic domain of the Prote | 2e-04 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 2e-04 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 2e-04 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 3e-04 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 3e-04 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 3e-04 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 4e-04 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 4e-04 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 7e-04 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 7e-04 | |
| cd05616 | 323 | cd05616, STKc_cPKC_beta, Catalytic domain of the P | 7e-04 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 0.001 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 0.001 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 0.001 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 0.001 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 0.001 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 0.001 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 0.002 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 0.002 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 0.003 | |
| cd05617 | 327 | cd05617, STKc_aPKC_zeta, Catalytic domain of the P | 0.003 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 0.003 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 0.003 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 0.003 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 0.004 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 0.004 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 0.004 | |
| COG0457 | 291 | COG0457, NrfG, FOG: TPR repeat [General function p | 0.004 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 5e-29
Identities = 60/245 (24%), Positives = 95/245 (38%), Gaps = 49/245 (20%)
Query: 72 VVYKGK-LENQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGDERL 129
VY + + +++A+K + + L E + +L + + L G + +
Sbjct: 8 TVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLY 67
Query: 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRIL 188
LV EY +L L E + LR++L + + LEY S G + H DL IL
Sbjct: 68 LVMEYCEGGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNG--IIHRDLKPENIL 124
Query: 189 FDED-GNPRLSTFGLMKNSRDGKSYST----NLAFTPPEYLR-TGRVTPESVIYSFGTLL 242
D D G +L+ FGL K KS A+ PE L G + +S I+S G +L
Sbjct: 125 LDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVIL 184
Query: 243 LDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 302
+L DLIR + LQ +P +RP+
Sbjct: 185 YEL--------PELKDLIR-----------------------------KMLQKDPEKRPS 207
Query: 303 PKSLV 307
K ++
Sbjct: 208 AKEIL 212
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 97.6 bits (244), Expect = 6e-23
Identities = 70/256 (27%), Positives = 111/256 (43%), Gaps = 28/256 (10%)
Query: 72 VVYKGKL-----ENQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEG 125
VYKG L + +AVK A + FL EAR + +L + + LLG C E
Sbjct: 14 EVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE 73
Query: 126 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNA 184
+ ++V EYMP L +L + + L L +A+ +EY SK H DL A
Sbjct: 74 EPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN--FIHRDLAA 131
Query: 185 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFG 239
L E+ ++S FGL ++ D Y + PE L+ G+ T +S ++SFG
Sbjct: 132 RNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLKEGKFTSKSDVWSFG 191
Query: 240 TLLLDLLS-GK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 294
LL ++ + G+ + + L+ ++ +C EL +L +C
Sbjct: 192 VLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRLPKPPNCPP---------ELYKLMLQCWA 242
Query: 295 YEPRERPNPKSLVTAL 310
+P +RP LV L
Sbjct: 243 EDPEDRPTFSELVEIL 258
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 95.3 bits (238), Expect = 4e-22
Identities = 70/256 (27%), Positives = 110/256 (42%), Gaps = 29/256 (11%)
Query: 72 VVYKGKLE-----NQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEG 125
VYKGKL+ + +AVK A + FL EAR + +L + + LLG C E
Sbjct: 14 EVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVKLLGVCTEE 73
Query: 126 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNA 184
+ +V EYM L +L + + L L +A+ +EY SK H DL A
Sbjct: 74 EPLYIVMEYMEGGDLLSYL-RKNRPKLSLSDLLSFALQIARGMEYLESKN--FIHRDLAA 130
Query: 185 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFG 239
L E+ ++S FGL ++ D Y + PE L+ G+ T +S ++SFG
Sbjct: 131 RNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLKEGKFTSKSDVWSFG 190
Query: 240 TLLLDLLS-GK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 294
LL ++ + G+ + L+ +++ +C EL L +C
Sbjct: 191 VLLWEIFTLGEQPYPGMSNEEVLEYLKNGYRLPQPPNCPP---------ELYDLMLQCWA 241
Query: 295 YEPRERPNPKSLVTAL 310
+P +RP LV L
Sbjct: 242 EDPEDRPTFSELVEIL 257
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 95.4 bits (238), Expect = 4e-22
Identities = 64/249 (25%), Positives = 102/249 (40%), Gaps = 20/249 (8%)
Query: 72 VVYKGKLEN-QRRIAVKRFN--RMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 128
VYK K + + +AVK + E R + +L + + L+ + D
Sbjct: 14 TVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLIDAFEDKDHL 73
Query: 129 LLVAEYMPNETLAKHLFHWETH-PMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYR 186
LV EY L +L P+ ++ L + + LEY S G + H DL
Sbjct: 74 YLVMEYCEGGDLFDYL---SRGGPLSEDEAKKIALQILRGLEYLHSNG--IIHRDLKPEN 128
Query: 187 ILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGR-VTPESVIYSFGTL 241
IL DE+G +++ FGL K S T TP PE L G P+ ++S G +
Sbjct: 129 ILLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVI 188
Query: 242 LLDLLSGKHI-PPSHALDLIR--DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 298
L +LL+GK + LD ++ R L + + E L +CL +P
Sbjct: 189 LYELLTGKPPFSGENILDQLQLIRRILGPPLEF--DEPKWSSGSEEAKDLIKKCLNKDPS 246
Query: 299 ERPNPKSLV 307
+RP + ++
Sbjct: 247 KRPTAEEIL 255
|
Length = 260 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 93.0 bits (232), Expect = 3e-21
Identities = 73/258 (28%), Positives = 115/258 (44%), Gaps = 32/258 (12%)
Query: 72 VVYKGKL-----ENQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEG 125
VYKG L + ++AVK A + R+ FLEEA + +L + + LLG C +G
Sbjct: 14 EVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRLLGVCTQG 73
Query: 126 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNA 184
+ +V EYMP L L + L++ L +A+ +EY SK H DL A
Sbjct: 74 EPLYIVTEYMPGGDLLDFL-RKHGEKLTLKDLLQMALQIAKGMEYLESKN--FVHRDLAA 130
Query: 185 YRILFDEDGNPRLSTFGLMKN-SRDGKSYSTNLAFTP-----PEYLRTGRVTPESVIYSF 238
L E+ ++S FGL ++ D P PE L+ G+ T +S ++SF
Sbjct: 131 RNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSF 190
Query: 239 GTLLLDLLSG-----KHIPPSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRC 292
G LL ++ + + L+L+ D ++ ++C + EL L +C
Sbjct: 191 GVLLWEIFTLGEQPYPGMSNEEVLELLEDGY-RLPRPENCPD---------ELYELMLQC 240
Query: 293 LQYEPRERPNPKSLVTAL 310
Y+P +RP LV L
Sbjct: 241 WAYDPEDRPTFSELVEDL 258
|
Length = 258 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 92.6 bits (231), Expect = 3e-21
Identities = 74/262 (28%), Positives = 111/262 (42%), Gaps = 33/262 (12%)
Query: 72 VVYKGKL----ENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLTNLLGCCCEGD 126
VYKGKL +AVK A + R FL+EAR + +L + + LLG C E +
Sbjct: 10 EVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEE 69
Query: 127 ERLLVAEYMPNETLAKHL-------FHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 179
LV EYM L +L E + L + +A+ +EY SK + ++
Sbjct: 70 PLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK-KFVH 128
Query: 180 HDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPES 233
DL A L ED ++S FGL ++ D Y + + PE L+ G T +S
Sbjct: 129 RDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKS 188
Query: 234 VIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 288
++SFG LL ++ + G + L+ +R + C + EL L
Sbjct: 189 DVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPD---------ELYEL 239
Query: 289 ASRCLQYEPRERPNPKSLVTAL 310
C Q +P +RP LV L
Sbjct: 240 MLSCWQLDPEDRPTFSELVERL 261
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 87.6 bits (218), Expect = 2e-19
Identities = 56/248 (22%), Positives = 93/248 (37%), Gaps = 26/248 (10%)
Query: 72 VVYKGK-LENQRRIAVKRFN-RMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 129
VY + + + +A+K + D + L E + + +L++ + L + D+
Sbjct: 14 KVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDEDKLY 73
Query: 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL---NAYR 186
LV EY L L A + + ALEY SKG ++ DL N
Sbjct: 74 LVMEYCEGGDLFDLLKKRGRLSEDEA--RFYLRQILSALEYLHSKGI-VHRDLKPEN--- 127
Query: 187 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN---LAFTPPEYLRTGRVTPESVIYSFGTLLL 243
IL DEDG+ +L+ FGL + G+ +T + PE L I+S G +L
Sbjct: 128 ILLDEDGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILY 187
Query: 244 DLLSGK-----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 298
+LL+GK I + +L+R + L +P
Sbjct: 188 ELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWD----ISPEAKDLIR---KLLVKDPE 240
Query: 299 ERPNPKSL 306
+R +
Sbjct: 241 KRLTAEEA 248
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 86.4 bits (214), Expect = 4e-19
Identities = 69/244 (28%), Positives = 107/244 (43%), Gaps = 29/244 (11%)
Query: 73 VYKGKLENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130
VYKG L+ +AVK R P R+FL+EA + Q + + L+G C + +
Sbjct: 11 VYKGVLKGNTEVAVKTC-RSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYI 69
Query: 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 190
V E +P +L L + + + L++ L A +EY SK ++ DL A L
Sbjct: 70 VMELVPGGSLLTFL-RKKKNRLTVKKLLQMSLDAAAGMEYLESKN-CIHRDLAARNCLVG 127
Query: 191 EDGNPRLSTFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVTPESVIYSFGTLLL 243
E+ ++S FG M +G Y+ + + +T PE L GR T ES ++S+G LL
Sbjct: 128 ENNVLKISDFG-MSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLW 186
Query: 244 DLLSGKHIP-----PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEP 297
+ S P + I + +M C E E+ RL +C Y+P
Sbjct: 187 ETFSLGDTPYPGMSNQQTRERI-ESGYRMPAPQLCPE---------EIYRLMLQCWAYDP 236
Query: 298 RERP 301
RP
Sbjct: 237 ENRP 240
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 80.1 bits (198), Expect = 6e-17
Identities = 68/244 (27%), Positives = 109/244 (44%), Gaps = 16/244 (6%)
Query: 73 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132
V G Q+ +AVK + + FL EA + LR+ L LLG +G+ +V
Sbjct: 22 VMLGDYRGQK-VAVKCLKDDS-TAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT 79
Query: 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 192
EYM +L +L + A +L L + + +EY K ++ DL A +L ED
Sbjct: 80 EYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK-NFVHRDLAARNVLVSED 138
Query: 193 GNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI 251
++S FGL K + G S + +T PE LR + + +S ++SFG LL ++ S +
Sbjct: 139 LVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 198
Query: 252 P-PSHALDLIRDR---NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 307
P P L + +M EG E+ ++ C + +P +RP K L
Sbjct: 199 PYPRIPLKDVVPHVEKGYRM---EAPEGC-----PPEVYKVMKDCWELDPAKRPTFKQLR 250
Query: 308 TALS 311
L+
Sbjct: 251 EQLA 254
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 80.2 bits (196), Expect = 3e-16
Identities = 75/365 (20%), Positives = 127/365 (34%), Gaps = 35/365 (9%)
Query: 60 NIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLR-NNRL 115
I+ + GE + VY + +++ +A+K + +FL E + + L +
Sbjct: 3 RILRKLGEGSFGEVYLAR--DRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNI 60
Query: 116 TNLLGCCCEGDERLLVAEYMPNETLAKHL-FHWETHPMKWAMRLRVVLHLAQALEYCTSK 174
L + LV EY+ +L L P+ + L ++ + ALEY SK
Sbjct: 61 VKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK 120
Query: 175 GRALYHDLNAYRILFDEDGN-PRLSTFGLMKNSRDGKSYSTN----------LAFTPPEY 223
G ++ D+ IL D DG +L FGL K D S S+ + PE
Sbjct: 121 G-IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEV 179
Query: 224 LR---TGRVTPESVIYSFGTLLLDLLSGKH--------IPPSHALDLIRDRNLQMLTDSC 272
L + S I+S G L +LL+G S L +I + L
Sbjct: 180 LLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPL 239
Query: 273 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA--LSPLQKETEVPSHVLMGIPHS 330
+ L + L +P+ R + S ++ L+ L+ + S +L +
Sbjct: 240 SP-SNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKESDLSDLLKPDDSA 298
Query: 331 ASVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGD 390
L P EA I DD + EL+ + + +
Sbjct: 299 PLRLSLPPSLEALISS--LNSLAISGSDLKLDDSNFSKELAPNGVSSSPHNSSSLLLSTA 356
Query: 391 VAFRQ 395
+ R
Sbjct: 357 SSKRS 361
|
Length = 384 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 75.1 bits (184), Expect = 3e-15
Identities = 63/238 (26%), Positives = 110/238 (46%), Gaps = 14/238 (5%)
Query: 73 VYKGKLE-NQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130
V+ G+L + +AVK PD + +FL+EAR + Q + + L+G C + +
Sbjct: 11 VFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 70
Query: 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 190
V E + L E +K +++V + A +EY SK ++ DL A L
Sbjct: 71 VMELVQGGDFLTFL-RTEGPRLKVKELIQMVENAAAGMEYLESK-HCIHRDLAARNCLVT 128
Query: 191 EDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLD 244
E ++S FG+ + DG ST + +T PE L GR + ES ++SFG LL +
Sbjct: 129 EKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWE 188
Query: 245 LLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 302
S +P ++ + ++ + + + + + RL RC +Y+P +RP+
Sbjct: 189 AFSLGAVPYAN----LSNQQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDPGQRPS 242
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 73.5 bits (180), Expect = 1e-14
Identities = 68/257 (26%), Positives = 116/257 (45%), Gaps = 23/257 (8%)
Query: 66 GEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG 125
GE V +G+ Q+ +AVK N + FLEE + +L + L LLG
Sbjct: 15 GEGEFGAVLQGEYTGQK-VAVK--NIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILH- 70
Query: 126 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 185
+ +V E M L L + L+ L +A+ +EY SK + ++ DL A
Sbjct: 71 NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK-KLVHRDLAAR 129
Query: 186 RILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLD 244
IL EDG ++S FGL + S + + +T PE L+ + + +S ++S+G LL +
Sbjct: 130 NILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWE 189
Query: 245 LLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE----LVRLASRCLQYEPRE 299
+ S G+ P +L +++ C+E + + + L + C + EP++
Sbjct: 190 VFSYGRAPYPKMSLKEVKE---------CVEKGYRMEPPEGCPADVYVLMTSCWETEPKK 240
Query: 300 RPNPKSLVTALSPLQKE 316
RP+ L L+KE
Sbjct: 241 RPSFHKLR---EKLEKE 254
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 73.1 bits (179), Expect = 1e-14
Identities = 70/251 (27%), Positives = 111/251 (44%), Gaps = 21/251 (8%)
Query: 73 VYKGKLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131
V+KG L+++ +AVK + + +FL EAR + Q + + L+G C + +V
Sbjct: 11 VFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIV 70
Query: 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 191
E +P L + +K ++ L A + Y SK ++ DL A L E
Sbjct: 71 MELVPGGDFLSFL-RKKKDELKTKQLVKFALDAAAGMAYLESKN-CIHRDLAARNCLVGE 128
Query: 192 DGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDLL 246
+ ++S FG+ + DG S+ L +T PE L GR + ES ++S+G LL +
Sbjct: 129 NNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETF 188
Query: 247 SGKHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 305
S P P R++ + SC Q DD + ++ RC Y+P RP
Sbjct: 189 SLGVCPYPGMTNQQAREQVEKGYRMSC--PQKCPDD---VYKVMQRCWDYKPENRPK--- 240
Query: 306 LVTALSPLQKE 316
S LQKE
Sbjct: 241 ----FSELQKE 247
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 71.7 bits (176), Expect = 5e-14
Identities = 69/261 (26%), Positives = 114/261 (43%), Gaps = 26/261 (9%)
Query: 62 VSEHGEKAPNVVYKGKLENQRRIAVKRFNR--MAWPDPRQFLEEARSVGQLRNNRLTNLL 119
+ E G VV+ GK + +A+K M+ D F+EEA+ + +L + L L
Sbjct: 9 LKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDD---FIEEAKVMMKLSHPNLVQLY 65
Query: 120 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRA 177
G C + +V EYM N L +L K L + + +A+EY S G
Sbjct: 66 GVCTKQRPIFIVTEYMANGCLLNYL---RERKGKLGTEWLLDMCSDVCEAMEYLESNG-F 121
Query: 178 LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVTPE 232
++ DL A L ED ++S FGL + D + S+ + + PPE R + +
Sbjct: 122 IHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSK 181
Query: 233 SVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD---GTELVRLA 289
S ++SFG L+ ++ S +P R N +++ +S G TE+ +
Sbjct: 182 SDVWSFGVLMWEVFSEGKMPYE------RFSNSEVV-ESVSAGYRLYRPKLAPTEVYTIM 234
Query: 290 SRCLQYEPRERPNPKSLVTAL 310
C +P +RP K L++ L
Sbjct: 235 YSCWHEKPEDRPAFKKLLSQL 255
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 69.1 bits (169), Expect = 4e-13
Identities = 62/241 (25%), Positives = 110/241 (45%), Gaps = 26/241 (10%)
Query: 73 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132
V+ G ++A+K + + P FL EA + QL++ RL L + + ++
Sbjct: 22 VWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVTQ-EPIYIIT 79
Query: 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 192
EYM N +L L E + + + +A+ + + K ++ DL A IL E
Sbjct: 80 EYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN-YIHRDLRAANILVSET 138
Query: 193 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 245
+++ FGL + +R+G + + +T PE + G T +S ++SFG LL ++
Sbjct: 139 LCCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEI 196
Query: 246 LSGKHIP-PSHA-LDLIR--DRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
++ IP P ++I+ +R +M D+C E EL L C + +P ER
Sbjct: 197 VTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPE---------ELYELMRLCWKEKPEER 247
Query: 301 P 301
P
Sbjct: 248 P 248
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 66.3 bits (162), Expect = 4e-12
Identities = 67/266 (25%), Positives = 108/266 (40%), Gaps = 39/266 (14%)
Query: 73 VYKGKLENQR-----RIAVKRFNRMAWPDPRQFLEEARSVGQLRN---NRLTNLLGCCCE 124
V + + ++AVK N R E R + LR + G C +
Sbjct: 20 VELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFE--REIEILRTLDHENIVKYKGVCEK 77
Query: 125 GDER--LLVAEYMPNETLAKHL-FHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHD 181
R L+ EY+P+ +L +L H + +K L + + ++Y S+ R ++ D
Sbjct: 78 PGGRSLRLIMEYLPSGSLRDYLQRHRDQINLK--RLLLFSSQICKGMDYLGSQ-RYIHRD 134
Query: 182 LNAYRILFDEDGNPRLSTFGLMK--NSRDGKSYSTNLAFTP-----PEYLRTGRVTPESV 234
L A IL + + ++S FGL K Y +P PE LRT + + S
Sbjct: 135 LAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASD 194
Query: 235 IYSFGTLLLDLLS-GKH--IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR---- 287
++SFG L +L + G PP+ L +I QM+ LE +G L R
Sbjct: 195 VWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLE---LLKEGERLPRPPSC 251
Query: 288 ------LASRCLQYEPRERPNPKSLV 307
L C + EP++RP+ L+
Sbjct: 252 PDEVYDLMKLCWEAEPQDRPSFADLI 277
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 65.3 bits (159), Expect = 7e-12
Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 21/223 (9%)
Query: 100 FLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHL-FHWETHPMKWAMRL 158
F E A + QL + L G C GDE ++V EY+ +L +L + + W +L
Sbjct: 46 FFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISW--KL 103
Query: 159 RVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST--- 214
V LA AL + KG L H ++ A +L + + + +K S G S +
Sbjct: 104 EVAKQLAWALHFLEDKG--LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK 161
Query: 215 -----NLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML 268
+ + PPE + + ++ + +SFGT L ++ SG P S ALD + LQ
Sbjct: 162 EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLS-ALD--SQKKLQFY 218
Query: 269 TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 311
D Q TEL L ++C+ YEP RP+ ++++ L+
Sbjct: 219 ED---RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 65.0 bits (158), Expect = 9e-12
Identities = 54/181 (29%), Positives = 87/181 (48%), Gaps = 10/181 (5%)
Query: 74 YKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL-LVA 132
Y+G ++AVK A + FL EA + QLR++ L LLG E L +V
Sbjct: 27 YRGN-----KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 79
Query: 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 192
EYM +L +L + L+ L + +A+EY + ++ DL A +L ED
Sbjct: 80 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN-FVHRDLAARNVLVSED 138
Query: 193 GNPRLSTFGLMKNSRDGKSYST-NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI 251
++S FGL K + + + +T PE LR + + +S ++SFG LL ++ S +
Sbjct: 139 NVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 198
Query: 252 P 252
P
Sbjct: 199 P 199
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 2e-11
Identities = 49/186 (26%), Positives = 90/186 (48%), Gaps = 8/186 (4%)
Query: 72 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131
VV GK Q +A+K + + +F+EEA+ + +L + +L L G C + +V
Sbjct: 19 VVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIV 77
Query: 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 191
EYM N L +L + L + + + + Y SK + ++ DL A L D+
Sbjct: 78 TEYMSNGCLLNYLREHGKRFQP-SQLLEMCKDVCEGMAYLESK-QFIHRDLAARNCLVDD 135
Query: 192 DGNPRLSTFGLMKNSRDGKSYST-----NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 246
G ++S FGL + D + S+ + ++PPE L + + +S +++FG L+ ++
Sbjct: 136 QGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVY 195
Query: 247 SGKHIP 252
S +P
Sbjct: 196 SLGKMP 201
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 63.4 bits (154), Expect = 3e-11
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 12/198 (6%)
Query: 62 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGC 121
V E G +V+ G +R++A+K R F+EEA+ + +L + +L L G
Sbjct: 9 VQEIGSGQFGLVWLGYWLEKRKVAIKTI-REGAMSEEDFIEEAQVMMKLSHPKLVQLYGV 67
Query: 122 CCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRALY 179
C E LV E+M + L+ +L K++ L + L + + + Y S ++
Sbjct: 68 CTERSPICLVFEFMEHGCLSDYL---RAQRGKFSQETLLGMCLDVCEGMAYLESSN-VIH 123
Query: 180 HDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVTPESV 234
DL A L E+ ++S FG+ + D + S+ + ++ PE + + +S
Sbjct: 124 RDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSD 183
Query: 235 IYSFGTLLLDLLSGKHIP 252
++SFG L+ ++ S P
Sbjct: 184 VWSFGVLMWEVFSEGKTP 201
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 63.8 bits (155), Expect = 3e-11
Identities = 59/247 (23%), Positives = 101/247 (40%), Gaps = 24/247 (9%)
Query: 84 IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGDER--LLVAEYMPNETL 140
+AVK R + +E + L + + GCC E + L+ EY+P +L
Sbjct: 36 VAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSL 95
Query: 141 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 200
+L H + A L + + + Y S+ ++ DL A +L D D ++ F
Sbjct: 96 RDYL---PKHKLNLAQLLLFAQQICEGMAYLHSQ-HYIHRDLAARNVLLDNDRLVKIGDF 151
Query: 201 GLMKNSRDGKSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKH 250
GL K +G Y + + + E L+ + + S ++SFG L +LL+ K
Sbjct: 152 GLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQ 211
Query: 251 IPPSHALDLIRDRNLQM----LTDSCLEGQ---FTDDDGTELVRLASRCLQYEPRERPNP 303
PP ++I + QM L + G + E+ L C + E + RP
Sbjct: 212 SPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTF 271
Query: 304 KSLVTAL 310
+SL+ L
Sbjct: 272 RSLIPIL 278
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 63.3 bits (154), Expect = 3e-11
Identities = 62/255 (24%), Positives = 111/255 (43%), Gaps = 32/255 (12%)
Query: 72 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131
VV+ GK Q ++A+K N A + F+EEA+ + +L + +L L G C + +V
Sbjct: 19 VVHLGKWRAQIKVAIKAINEGAMSE-EDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIV 77
Query: 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 191
E+M N L +L + K M L + + + +EY ++ DL A L
Sbjct: 78 TEFMENGCLLNYLRQRQGKLSK-DMLLSMCQDVCEGMEYLERNS-FIHRDLAARNCLVSS 135
Query: 192 DGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDLL 246
G ++S FG+ + D + S++ A ++PPE + + +S ++SFG L+ ++
Sbjct: 136 TGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVF 195
Query: 247 SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR--LAS--------RCLQYE 296
+ +P + N +++ G L R LAS C +
Sbjct: 196 TEGKMP------FEKKSNYEVVEMI--------SRGFRLYRPKLASMTVYEVMYSCWHEK 241
Query: 297 PRERPNPKSLVTALS 311
P RP L+ A++
Sbjct: 242 PEGRPTFAELLRAIT 256
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 63.0 bits (154), Expect = 4e-11
Identities = 52/245 (21%), Positives = 96/245 (39%), Gaps = 21/245 (8%)
Query: 72 VVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130
VYK + + +A+K + + + E + + + ++ + G + DE +
Sbjct: 15 EVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWI 74
Query: 131 VAEYMPNETLAKHL-FHWETHPMKW-AMRLRVVLHLAQALEYCTSKGRALYHDLNAYRIL 188
V E+ +L L +T A + +L + LEY S G ++ D+ A IL
Sbjct: 75 VMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELL---KGLEYLHSNGI-IHRDIKAANIL 130
Query: 189 FDEDGNPRLSTFGL---MKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 245
DG +L FGL + +++ + + PE + ++ I+S G ++L
Sbjct: 131 LTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIEL 190
Query: 246 LSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG----TELVRLASRCLQYEPRERP 301
GK PP +L + L + G + E +CLQ P +RP
Sbjct: 191 AEGK--PPYS--ELPPMKALFKIAT---NGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRP 243
Query: 302 NPKSL 306
+ L
Sbjct: 244 TAEQL 248
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 62.7 bits (153), Expect = 5e-11
Identities = 63/241 (26%), Positives = 113/241 (46%), Gaps = 25/241 (10%)
Query: 73 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132
V+ G ++AVK + P FL+EA+ + +LR+++L L C E + +V
Sbjct: 22 VWMGTWNGTTKVAVKTL-KPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT 80
Query: 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 192
EYM +L L E ++ + + +A+ + Y S+ ++ DL A IL E+
Sbjct: 81 EYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR-NYIHRDLAARNILVGEN 139
Query: 193 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 245
+++ FGL + +R+G + + +T PE GR T +S ++SFG LL ++
Sbjct: 140 LVCKIADFGLARLIEDDEYTAREGAKFP--IKWTAPEAANYGRFTIKSDVWSFGILLTEI 197
Query: 246 LSGKHIP-PS-HALDLIR--DRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
++ +P P +++ +R +M +C E EL L +C +P ER
Sbjct: 198 VTYGRVPYPGMTNREVLEQVERGYRMPRPPNCPE---------ELYDLMLQCWDKDPEER 248
Query: 301 P 301
P
Sbjct: 249 P 249
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 6e-11
Identities = 57/249 (22%), Positives = 109/249 (43%), Gaps = 21/249 (8%)
Query: 73 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132
V++G +N+ R+A+K + F +E +++ +LR+ L +L C G+ ++
Sbjct: 22 VWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT 81
Query: 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 192
E M +L L E + A + + +A+ + Y + +++ DL A IL ED
Sbjct: 82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ-NSIHRDLAARNILVGED 140
Query: 193 GNPRLSTFGLMKNSRDG--KSYSTNLAF--TPPEYLRTGRVTPESVIYSFGTLLLDLLSG 248
+++ FGL + ++ S + + T PE G + +S ++SFG LL ++ +
Sbjct: 141 LVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTY 200
Query: 249 KHIP-----PSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 302
+P D I +M C + E+ ++ C EP +RP+
Sbjct: 201 GQVPYPGMNNHEVYDQI-TAGYRMPCPAKCPQ---------EIYKIMLECWAAEPEDRPS 250
Query: 303 PKSLVTALS 311
K+L L
Sbjct: 251 FKALREELD 259
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 62.2 bits (152), Expect = 7e-11
Identities = 55/182 (30%), Positives = 77/182 (42%), Gaps = 18/182 (9%)
Query: 126 DERL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 184
+E+L LV EY P L HL + A + ALEY S G +Y DL
Sbjct: 65 EEKLYLVLEYAPGGELFSHLSKEGRFSEERA--RFYAAEIVLALEYLHSLG-IIYRDLKP 121
Query: 185 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 240
IL D DG+ +L+ FGL K S + TP PE L +S G
Sbjct: 122 ENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGV 181
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ--FTDDDGTELVRLASRCLQYEPR 298
LL ++L+GK PP +A + + + + L+ F + E L S LQ +P
Sbjct: 182 LLYEMLTGK--PPFYA------EDRKEIYEKILKDPLRFPEFLSPEARDLISGLLQKDPT 233
Query: 299 ER 300
+R
Sbjct: 234 KR 235
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 7e-11
Identities = 73/284 (25%), Positives = 115/284 (40%), Gaps = 52/284 (18%)
Query: 64 EHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLT 116
E GE A VYKG+L + +A+K A P +Q F +EA + L++ +
Sbjct: 12 ELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIV 71
Query: 117 NLLGCCCEGDERLLVAEYMPNETLAKHLFHWETH--------------PMKWAMRLRVVL 162
LLG C + ++ EY+ + L + L H + + L + +
Sbjct: 72 CLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAI 131
Query: 163 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------- 215
+A +EY +S ++ DL A L E ++S FGL SRD YS +
Sbjct: 132 QIAAGMEYLSSH-HFVHRDLAARNCLVGEGLTVKISDFGL---SRDI--YSADYYRVQSK 185
Query: 216 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQ 266
+ + PPE + G+ T ES I+SFG +L ++ S P +++IR R L
Sbjct: 186 SLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLL 245
Query: 267 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 310
+ C + L C P RP K + T L
Sbjct: 246 PCPEDC---------PARVYALMIECWNEIPARRPRFKDIHTRL 280
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 8e-11
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 37/220 (16%)
Query: 61 IVSEHGEKAPNVVYKGKLENQRR------IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNN 113
+ E GE A V+ G+ + +AVK A D R+ F EA + ++
Sbjct: 9 LKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHE 68
Query: 114 RLTNLLGCCCEGDERLLVAEYMPNETLAKHL------------FHWETHPMKWAMRLRVV 161
+ G C EGD ++V EYM + L K L + + L++
Sbjct: 69 NIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIA 128
Query: 162 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 215
+ +A + Y S+ ++ DL L D ++ FG+ SRD Y+T+
Sbjct: 129 VQIASGMVYLASQ-HFVHRDLATRNCLVGYDLVVKIGDFGM---SRD--VYTTDYYRVGG 182
Query: 216 -----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GK 249
+ + PPE + + T ES ++SFG +L ++ + GK
Sbjct: 183 HTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGK 222
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 61.2 bits (148), Expect = 2e-10
Identities = 65/273 (23%), Positives = 121/273 (44%), Gaps = 36/273 (13%)
Query: 64 EHGEKAPNVVYKG------KLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLT 116
E G+ + +VY+G K E + R+A+K N A R +FL EA + + + +
Sbjct: 13 ELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 72
Query: 117 NLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHL----AQAL 168
LLG +G L++ E M L +L E +P++ L+ ++ + A +
Sbjct: 73 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGM 132
Query: 169 EYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNLAFTPPE 222
Y + + ++ DL A + ED ++ FG+ ++ R G + + PE
Sbjct: 133 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 191
Query: 223 YLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQF 277
L+ G T S ++SFG +L ++ + P L + + L D+C + F
Sbjct: 192 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKPDNCPDMLF 251
Query: 278 TDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 310
EL+R+ C QY P+ RP+ +++++
Sbjct: 252 ------ELMRM---CWQYNPKMRPSFLEIISSI 275
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 62.2 bits (151), Expect = 3e-10
Identities = 79/319 (24%), Positives = 141/319 (44%), Gaps = 42/319 (13%)
Query: 21 VLEAPDVEN-DEMSEVDGLPS--FREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGK 77
LE VEN D E+ S + T+ + S EN++S + A YKGK
Sbjct: 657 NLELKRVENEDGTWELQFFDSKVSKSITINDI---LSSLKEENVISRGKKGAS---YKGK 710
Query: 78 -LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136
++N + VK N + + + +G+L++ + L+G C L+ EY+
Sbjct: 711 SIKNGMQFVVKEINDVNSIPSSEIAD----MGKLQHPNIVKLIGLCRSEKGAYLIHEYIE 766
Query: 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEY--CTSKGRALYHDLNAYRILFDEDGN 194
+ L++ L + W R ++ + +A+AL + C + +L+ +I+ D
Sbjct: 767 GKNLSEVL-----RNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDE 821
Query: 195 PRL--STFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 252
P L S GL+ D K + ++ A+ PE T +T +S IY FG +L++LL+GK
Sbjct: 822 PHLRLSLPGLL--CTDTKCFISS-AYVAPETRETKDITEKSDIYGFGLILIELLTGKS-- 876
Query: 253 PSHA--------LDLIR----DRNLQMLTDSCLEGQFT--DDDGTELVRLASRCLQYEPR 298
P+ A ++ R D +L M D + G + ++ E++ LA C +P
Sbjct: 877 PADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPT 936
Query: 299 ERPNPKSLVTALSPLQKET 317
RP ++ L + +
Sbjct: 937 ARPCANDVLKTLESASRSS 955
|
Length = 968 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 60.4 bits (146), Expect = 4e-10
Identities = 67/277 (24%), Positives = 114/277 (41%), Gaps = 36/277 (12%)
Query: 60 NIVSEHGEKAPNVVYKG------KLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRN 112
++ E G+ + +VY+G K E + R+AVK N A R +FL EA +
Sbjct: 9 TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 68
Query: 113 NRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHL---- 164
+ + LLG +G L+V E M + L +L E +P + L+ ++ +
Sbjct: 69 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 128
Query: 165 AQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNLAF 218
A + Y +K + ++ DL A + D ++ FG+ ++ R G + +
Sbjct: 129 ADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 187
Query: 219 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCL 273
PE L+ G T S ++SFG +L ++ S P L + D D+C
Sbjct: 188 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP 247
Query: 274 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 310
E + L C Q+ P+ RP +V L
Sbjct: 248 E---------RVTDLMRMCWQFNPKMRPTFLEIVNLL 275
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 1e-09
Identities = 46/187 (24%), Positives = 90/187 (48%), Gaps = 11/187 (5%)
Query: 73 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132
V++G N +AVK + DP+ FL EA+ + +LR+ +L L C + +V
Sbjct: 22 VWEGLWNNTTPVAVKTL-KPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT 80
Query: 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 192
E M +L ++L +K + + +A + Y ++ ++ DL A +L E+
Sbjct: 81 ELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ-NYIHRDLAARNVLVGEN 139
Query: 193 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 245
+++ FGL + +R+G + + +T PE R + +S ++SFG LL ++
Sbjct: 140 NICKVADFGLARVIKEDIYEAREGAKFP--IKWTAPEAALYNRFSIKSDVWSFGILLTEI 197
Query: 246 LSGKHIP 252
++ +P
Sbjct: 198 VTYGRMP 204
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 58.9 bits (142), Expect = 1e-09
Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 26/241 (10%)
Query: 73 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132
V+ G ++A+K + P FL+EA+ + +LR+++L L E + +V
Sbjct: 22 VWMGTWNGTTKVAIKTL-KPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVT 79
Query: 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 192
E+M +L L + +K + + +A + Y + ++ DL A IL ++
Sbjct: 80 EFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAY-IERMNYIHRDLRAANILVGDN 138
Query: 193 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 245
+++ FGL + +R G + + +T PE GR T +S ++SFG LL +L
Sbjct: 139 LVCKIADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 196
Query: 246 LSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
++ +P L+ + +R +M C +G + EL++L C + +P ER
Sbjct: 197 VTKGRVPYPGMVNREVLEQV-ERGYRM---PCPQG--CPESLHELMKL---CWKKDPDER 247
Query: 301 P 301
P
Sbjct: 248 P 248
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 1e-09
Identities = 59/237 (24%), Positives = 104/237 (43%), Gaps = 18/237 (7%)
Query: 73 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132
V+ G ++AVK + P FLEEA+ + +LR+++L L E + +V
Sbjct: 22 VWMGTWNGNTKVAVKTL-KPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVT 79
Query: 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 192
EYM +L L E +K + + +A + Y + ++ DL + IL +
Sbjct: 80 EYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAY-IERMNYIHRDLRSANILVGDG 138
Query: 193 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 245
+++ FGL + +R G + + +T PE GR T +S ++SFG LL +L
Sbjct: 139 LVCKIADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 196
Query: 246 LSGKHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 301
++ +P P + +R + + D L L +C + +P ERP
Sbjct: 197 VTKGRVPYPG-----MNNREVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERP 248
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 2e-09
Identities = 62/242 (25%), Positives = 104/242 (42%), Gaps = 28/242 (11%)
Query: 73 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132
V+ G R+A+K + P FL+EA+ + +LR+ +L L E + +V
Sbjct: 22 VWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 79
Query: 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 192
EYM +L L ++ + + +A + Y + ++ DL A IL E+
Sbjct: 80 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGEN 138
Query: 193 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 245
+++ FGL + +R G + + +T PE GR T +S ++SFG LL +L
Sbjct: 139 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 196
Query: 246 LSGKHIP-----PSHALDLIRDRNLQMLTDS-CLEGQFTDDDGTELVRLASRCLQYEPRE 299
+ +P LD + +R +M C E L L +C + EP E
Sbjct: 197 TTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPE---------SLHDLMCQCWRKEPEE 246
Query: 300 RP 301
RP
Sbjct: 247 RP 248
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 58.0 bits (141), Expect = 2e-09
Identities = 44/160 (27%), Positives = 63/160 (39%), Gaps = 19/160 (11%)
Query: 158 LRVVLHLAQALEYC----TSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS 213
R++ L AL C L+ DL I D + N +L FGL K S++
Sbjct: 108 WRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFA 167
Query: 214 TNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 269
TP PE L +S I+S G L+ +L + PP A RN L
Sbjct: 168 KTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALS--PPFTA------RNQLQLA 219
Query: 270 DSCLEGQFTDDDG---TELVRLASRCLQYEPRERPNPKSL 306
EG+F +EL + L +P +RP+ + L
Sbjct: 220 SKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEEL 259
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 57.7 bits (140), Expect = 3e-09
Identities = 64/284 (22%), Positives = 114/284 (40%), Gaps = 48/284 (16%)
Query: 61 IVSEHGEKAPNVVYKGKLEN------QRRIAVKRFN-RMAWPDPRQFLEEARSVGQLRNN 113
++ E G+ + +VY+G + + R+A+K N + + +FL EA + + +
Sbjct: 10 LIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCH 69
Query: 114 RLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT- 172
+ LLG G L+V E M L +L P L + ++
Sbjct: 70 HVVRLLGVVSTGQPTLVVMELMAKGDLKSYL--RSRRPEAENNPGLGPPTLQKFIQMAAE 127
Query: 173 -SKGRALYH-------DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--------- 215
+ G A DL A + ED ++ FG+ +RD Y T+
Sbjct: 128 IADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGM---TRD--IYETDYYRKGGKGL 182
Query: 216 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP---PSH--ALDLIRDRNLQML 268
+ + PE L+ G T +S ++SFG +L ++ + P S+ L + D L
Sbjct: 183 LPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDL 242
Query: 269 TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 312
++C + +L+ L C QY P+ RP +V++L
Sbjct: 243 PENCPD---------KLLELMRMCWQYNPKMRPTFLEIVSSLKD 277
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 3e-09
Identities = 55/252 (21%), Positives = 108/252 (42%), Gaps = 19/252 (7%)
Query: 66 GEKAPNVVYKGKLENQRRI-AVKRFN--RMAWPDPRQFLEEARSVGQLRNNRLTNLLGCC 122
G+ + VV+K + +R+ A+K+ + +M + + ++EAR + +L ++ +
Sbjct: 9 GKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESF 68
Query: 123 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL 182
+ + +V EY N L K L P+ R + + L + SK + L+ D+
Sbjct: 69 LDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK-KILHRDI 127
Query: 183 NAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSF 238
+ + D N ++ G+ K D +++ + TP PE +S +++
Sbjct: 128 KSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWAL 187
Query: 239 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG---TELVRLASRCLQY 295
G +L + +GKH P A N L + G F +L +L +CL
Sbjct: 188 GVVLYECCTGKH--PFDA------NNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCLTK 239
Query: 296 EPRERPNPKSLV 307
+ R+RP+ L+
Sbjct: 240 DYRQRPDTFQLL 251
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 56.4 bits (136), Expect = 7e-09
Identities = 59/275 (21%), Positives = 108/275 (39%), Gaps = 37/275 (13%)
Query: 66 GEKAPNVVYKGKLE----NQRRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL 119
GE V +G+L +Q ++AVK + + + + +FL EA + + + L+
Sbjct: 8 GEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLI 67
Query: 120 GCCCEGDER------LLVAEYMPNETLAKHLFH--WETHPMKWA--MRLRVVLHLAQALE 169
G C E +++ +M + L L + P K L+ ++ +A +E
Sbjct: 68 GVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGME 127
Query: 170 YCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPP------EY 223
Y +++ ++ DL A + ED ++ FGL K G Y P E
Sbjct: 128 YLSNR-NFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIES 186
Query: 224 LRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFT 278
L T +S +++FG + ++ + P D +R N + CL+
Sbjct: 187 LADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPEDCLD---- 242
Query: 279 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 313
EL L C + +P++RP L L +
Sbjct: 243 -----ELYDLMYSCWRADPKDRPTFTKLREVLENI 272
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 55.9 bits (135), Expect = 9e-09
Identities = 69/261 (26%), Positives = 120/261 (45%), Gaps = 34/261 (13%)
Query: 72 VVYKGKL--ENQRRI--AVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 126
VY G L + ++I AVK NR+ + QFL+E + + + +LLG C +
Sbjct: 10 CVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSE 69
Query: 127 -ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 185
L+V YM + L ++ ETH + L +A+ +EY SK + ++ DL A
Sbjct: 70 GSPLVVLPYMKHGDL-RNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK-KFVHRDLAAR 127
Query: 186 RILFDEDGNPRLSTFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVTPESVIYS 237
+ DE +++ FGL ++ D + YS + + + E L+T + T +S ++S
Sbjct: 128 NCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWS 187
Query: 238 FGTLLLDLLSGKHIPPSHALD-------LIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290
FG LL +L++ + PP +D L++ R L L+ ++ D L +
Sbjct: 188 FGVLLWELMT-RGAPPYPDVDSFDITVYLLQGRRL-------LQPEYCPD---PLYEVML 236
Query: 291 RCLQYEPRERPNPKSLVTALS 311
C +P RP LV+ +
Sbjct: 237 SCWHPKPEMRPTFSELVSRIE 257
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 55.8 bits (135), Expect = 9e-09
Identities = 66/279 (23%), Positives = 103/279 (36%), Gaps = 53/279 (18%)
Query: 60 NIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTN 117
++ G A VVY L N ++A+KR + + +E +++ Q + +
Sbjct: 4 ELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVK 63
Query: 118 LLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRV--------VLH-LAQAL 168
GDE LV Y+ +L MK + VL + + L
Sbjct: 64 YYTSFVVGDELWLVMPYLSGGSLL--------DIMKSSYPRGGLDEAIIATVLKEVLKGL 115
Query: 169 EYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG----LMKNSRDGKSYSTNLAFTP---- 220
EY S G+ ++ D+ A IL EDG+ +++ FG L + TP
Sbjct: 116 EYLHSNGQ-IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMA 174
Query: 221 PEYLRTGRVTPESV-IYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLT----DS 271
PE + I+SFG ++L +G PP L MLT
Sbjct: 175 PEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVL---------MLTLQNDPP 225
Query: 272 CLEGQFTDDD----GTELVRLASRCLQYEPRERPNPKSL 306
LE T D ++ S CLQ +P +RP + L
Sbjct: 226 SLE---TGADYKKYSKSFRKMISLCLQKDPSKRPTAEEL 261
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 55.8 bits (134), Expect = 1e-08
Identities = 62/263 (23%), Positives = 107/263 (40%), Gaps = 42/263 (15%)
Query: 84 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKH 143
+AVK + + F EA + L++ + G C EGD ++V EYM + L K
Sbjct: 38 VAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKF 97
Query: 144 L--------FHWETHP---MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 192
L E + + + L + +A + Y S+ ++ DL L E+
Sbjct: 98 LRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ-HFVHRDLATRNCLVGEN 156
Query: 193 GNPRLSTFGLMKNSRDGKSYSTN-----------LAFTPPEYLRTGRVTPESVIYSFGTL 241
++ FG+ SRD YST+ + + PPE + + T ES ++S G +
Sbjct: 157 LLVKIGDFGM---SRD--VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVV 211
Query: 242 LLDLLS-GK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 296
L ++ + GK + + ++ I + +C + E+ L C Q E
Sbjct: 212 LWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPK---------EVYDLMLGCWQRE 262
Query: 297 PRERPNPKSLVTALSPLQKETEV 319
P R N K + + L L K + V
Sbjct: 263 PHMRLNIKEIHSLLQNLAKASPV 285
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 55.3 bits (134), Expect = 2e-08
Identities = 50/246 (20%), Positives = 93/246 (37%), Gaps = 27/246 (10%)
Query: 73 VYKGKLENQ-RRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCC--EGDE 127
VY ++ +AVK + + + E R + L++ + G E +
Sbjct: 16 VYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNT 75
Query: 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLA----QALEYCTSKGRALYH-DL 182
+ EY+ +L+ L + V+ + L Y S G H D+
Sbjct: 76 LNIFLEYVSGGSLSSLL------KKFGKLPEPVIRKYTRQILEGLAYLHSNGIV--HRDI 127
Query: 183 NAYRILFDEDGNPRLSTFGLMK--NSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIY 236
IL D DG +L+ FG K + + ++ TP PE +R + I+
Sbjct: 128 KGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIW 187
Query: 237 SFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 296
S G ++++ +GK P S + + L + S + + E +CL+ +
Sbjct: 188 SLGCTVIEMATGKP-PWSELGNPM--AALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRD 244
Query: 297 PRERPN 302
P++RP
Sbjct: 245 PKKRPT 250
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 55.2 bits (133), Expect = 2e-08
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 26/225 (11%)
Query: 100 FLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLR 159
F E A + QL + L L G C DE ++V EY+ L L H E + + +L
Sbjct: 48 FFETASLMSQLSHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFL-HREKNNVSLHWKLD 105
Query: 160 VVLHLAQALEYCTSK--------GRALY---HDLNAYRILFDEDGNPRLSTFGLMKNSRD 208
V LA AL Y K G+ + + LN + F + +P + L + R
Sbjct: 106 VAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERV 165
Query: 209 GKSYSTNLAFTPPEYLRTGRVTPESV--IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 266
+ + PE +R G+ + +SFGT LL++ S P S L +
Sbjct: 166 ERI-----PWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLS---TLSSSEKER 217
Query: 267 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 311
D + D EL L ++C Y+P +RP+ ++++ L+
Sbjct: 218 FYQDQH---RLPMPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 55.0 bits (132), Expect = 2e-08
Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 11/187 (5%)
Query: 73 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132
V+ G N ++AVK + + FLEEA + L++++L L + + ++
Sbjct: 22 VWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 80
Query: 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 192
EYM +L L E + + +A+ + Y K ++ DL A +L E
Sbjct: 81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY-IHRDLRAANVLVSES 139
Query: 193 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 245
+++ FGL + +R+G + + +T PE + G T +S ++SFG LL ++
Sbjct: 140 LMCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGSFTIKSDVWSFGILLYEI 197
Query: 246 LSGKHIP 252
++ IP
Sbjct: 198 VTYGKIP 204
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 4e-08
Identities = 65/284 (22%), Positives = 117/284 (41%), Gaps = 48/284 (16%)
Query: 62 VSEHGEKAPNVVYKGKL-----ENQRRIAVKRF----NRMAWPDPRQFLEEARSVGQLRN 112
+ E GE A +YKG L ++ + +A+K N W + F +EA + +L +
Sbjct: 10 MEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGE---FQQEASLMAELHH 66
Query: 113 NRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHP-----------MKWAMR---- 157
+ LLG + ++ EY+ L + L H +K ++
Sbjct: 67 PNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDF 126
Query: 158 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 215
L + + +A +EY +S ++ DL A IL E + ++S GL + Y
Sbjct: 127 LHIAIQIAAGMEYLSSH-FFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPK 185
Query: 216 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQ 266
+ + PPE + G+ + +S I+SFG +L ++ S P ++++R R L
Sbjct: 186 SLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLL 245
Query: 267 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 310
++ C ++ L + C Q P RP K + T L
Sbjct: 246 PCSEDCPPRMYS---------LMTECWQEGPSRRPRFKDIHTRL 280
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 5e-08
Identities = 61/264 (23%), Positives = 115/264 (43%), Gaps = 28/264 (10%)
Query: 64 EHGEKAPNVVYKGKLENQRR----IAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLTNL 118
E GE V +G+L+ + +A+K + R FL EA +GQ + + L
Sbjct: 16 EFGE-----VCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRL 70
Query: 119 LGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRAL 178
G + +++ EYM N +L K L + + ++ +A ++Y + +
Sbjct: 71 EGVVTKSRPVMIITEYMENGSLDKFLRENDGK-FTVGQLVGMLRGIASGMKYLSEMN-YV 128
Query: 179 YHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTN-----LAFTPPEYLRTGRVTPE 232
+ DL A IL + + ++S FGL + D ++ Y+T + +T PE + + T
Sbjct: 129 HRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSA 188
Query: 233 SVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG---QFTDDDGTELVRLA 289
S ++SFG ++ +++S P D + Q + + +G D + L +L
Sbjct: 189 SDVWSFGIVMWEVMSYGERP-------YWDMSNQDVIKAVEDGYRLPPPMDCPSALYQLM 241
Query: 290 SRCLQYEPRERPNPKSLVTALSPL 313
C Q + ERP +V+ L +
Sbjct: 242 LDCWQKDRNERPTFSQIVSTLDKM 265
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 53.8 bits (129), Expect = 6e-08
Identities = 40/156 (25%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 98 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 157
R FL EA ++GQ ++ + L G G+ ++V EYM N L L E + A +
Sbjct: 51 RGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLV--AGQ 108
Query: 158 LRVVLH-LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN- 215
L +L LA ++Y + G ++ L A+++L + D ++S F ++ + Y+T
Sbjct: 109 LMGMLPGLASGMKYLSEMG-YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMS 167
Query: 216 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 247
+ + PE ++ + S ++SFG ++ +++S
Sbjct: 168 GKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMS 203
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 53.6 bits (128), Expect = 8e-08
Identities = 53/230 (23%), Positives = 101/230 (43%), Gaps = 11/230 (4%)
Query: 82 RRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLA 141
+ +A+K+ N P + E + +L+N + N L GDE +V EY+ +L
Sbjct: 45 QEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLT 104
Query: 142 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 201
+ + A R L QALE+ + + ++ D+ + +L DG+ +L+ FG
Sbjct: 105 DVVTETCMDEAQIAAVCRECL---QALEFLHAN-QVIHRDIKSDNVLLGMDGSVKLTDFG 160
Query: 202 LMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL 257
+S + + TP PE + P+ I+S G + ++++ G+ PP
Sbjct: 161 FCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE--PPYLNE 218
Query: 258 DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 307
+ +R L + T+ E Q + +RCL+ + +R + K L+
Sbjct: 219 NPLRALYL-IATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELL 267
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|222112 pfam13414, TPR_11, TPR repeat | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 9e-08
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 386 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYL-MSDMPQDALNDAMQAQ 444
K G+ F+ D +AIE Y + ++ + Y +L YL + ++AL D +A
Sbjct: 7 KNLGNALFKLGDYDEAIEAYEKALELDPD-NAEAYYNLALAYLKLGKDYEEALEDLEKAL 65
Query: 445 IISP 448
+ P
Sbjct: 66 ELDP 69
|
Length = 69 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 52.3 bits (125), Expect = 2e-07
Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 31/228 (13%)
Query: 100 FLEEARSVGQLRNNRLTNLLGCCCEGDER------LLVAEYMPNETLAKHLFHWETHP-- 151
FL EA + + + + L+G C + E +++ +M + L L +
Sbjct: 47 FLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCP 106
Query: 152 --MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 209
+ M ++ + +A +EY +SK ++ DL A + +E+ N ++ FGL K +G
Sbjct: 107 QYLPTQMLVKFMTDIASGMEYLSSK-SFIHRDLAARNCMLNENMNVCVADFGLSKKIYNG 165
Query: 210 KSYSTNLAFTPP------EYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALD 258
Y P E L T +S ++SFG + ++ + P S D
Sbjct: 166 DYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYD 225
Query: 259 LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 306
+R N CL+G L L S C P++RP+ ++L
Sbjct: 226 YLRQGNRLKQPPDCLDG---------LYSLMSSCWLLNPKDRPSFETL 264
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 52.0 bits (124), Expect = 2e-07
Identities = 57/247 (23%), Positives = 105/247 (42%), Gaps = 12/247 (4%)
Query: 66 GEKAPNVVYKG-KLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 124
G+ A VY + + +A+++ N P + E + + +N + N L
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 125 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 184
GDE +V EY+ +L + + A R L QALE+ S + ++ D+ +
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSN-QVIHRDIKS 144
Query: 185 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 240
IL DG+ +L+ FG +S + + TP PE + P+ I+S G
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
+ ++++ G+ PP + +R L + T+ E Q + +RCL + +R
Sbjct: 205 MAIEMIEGE--PPYLNENPLRALYL-IATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR 261
Query: 301 PNPKSLV 307
+ K L+
Sbjct: 262 GSAKELL 268
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 3e-07
Identities = 51/236 (21%), Positives = 103/236 (43%), Gaps = 13/236 (5%)
Query: 84 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKH 143
+AVK +FL+EA + ++++ L LLG C ++ E+M L +
Sbjct: 34 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 92
Query: 144 LFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLM 203
L + + L + ++ A+EY K ++ DL A L E+ +++ FGL
Sbjct: 93 LRECNRQEVNAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLS 151
Query: 204 KNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL 257
+ G +Y+ + + +T PE L + + +S +++FG LL ++ + + P +
Sbjct: 152 RLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGI 209
Query: 258 DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 313
DL + L + + + ++ L C Q+ P +RP+ + A +
Sbjct: 210 DL---SQVYELLEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 51.6 bits (123), Expect = 3e-07
Identities = 57/247 (23%), Positives = 105/247 (42%), Gaps = 12/247 (4%)
Query: 66 GEKAPNVVYKG-KLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 124
G+ A VY + + +A+K+ N P + E + + +N + N L
Sbjct: 28 GQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 87
Query: 125 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 184
GDE +V EY+ +L + + A R L QAL++ S + ++ D+ +
Sbjct: 88 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALDFLHSN-QVIHRDIKS 143
Query: 185 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 240
IL DG+ +L+ FG +S + + TP PE + P+ I+S G
Sbjct: 144 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 203
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
+ ++++ G+ PP + +R L + T+ E Q + +RCL+ + R
Sbjct: 204 MAIEMVEGE--PPYLNENPLRALYL-IATNGTPELQNPERLSAVFRDFLNRCLEMDVDRR 260
Query: 301 PNPKSLV 307
+ K L+
Sbjct: 261 GSAKELL 267
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 51.1 bits (122), Expect = 4e-07
Identities = 52/264 (19%), Positives = 103/264 (39%), Gaps = 44/264 (16%)
Query: 84 IAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL-- 140
+AVK A + R L E + Q+ + + L G C + LL+ EY +L
Sbjct: 33 VAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRS 92
Query: 141 --------------------AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180
+ +L + + + + +++ ++Y ++ + ++
Sbjct: 93 FLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQY-LAEMKLVHR 151
Query: 181 DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESV 234
DL A +L E ++S FGL ++ + SY + + E L T +S
Sbjct: 152 DLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSD 211
Query: 235 IYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 289
++SFG LL ++++ G + I P +L++ ++C E E+ L
Sbjct: 212 VWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPENCSE---------EMYNLM 262
Query: 290 SRCLQYEPRERPNPKSLVTALSPL 313
C + EP +RP + L +
Sbjct: 263 LTCWKQEPDKRPTFADISKELEKM 286
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 50.8 bits (121), Expect = 5e-07
Identities = 52/223 (23%), Positives = 101/223 (45%), Gaps = 25/223 (11%)
Query: 100 FLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLR 159
FL EA + L++++L L + + ++ E+M +L L E +
Sbjct: 48 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 106
Query: 160 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSY 212
+A+ + + + ++ DL A IL +++ FGL + +R+G +
Sbjct: 107 FSAQIAEGMAF-IEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF 165
Query: 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHA-LDLIR--DRNLQM- 267
+ +T PE + G T +S ++SFG LL+++++ IP P + ++IR +R +M
Sbjct: 166 P--IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMP 223
Query: 268 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 310
++C E EL + RC + P ERP + + + L
Sbjct: 224 RPENCPE---------ELYNIMMRCWKNRPEERPTFEYIQSVL 257
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 51.2 bits (122), Expect = 5e-07
Identities = 64/266 (24%), Positives = 104/266 (39%), Gaps = 45/266 (16%)
Query: 84 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKH 143
+AVK + F EA + L++ + G C +GD ++V EYM + L K
Sbjct: 38 VAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKF 97
Query: 144 LFHWETHPM----------KWAMRLRVVLH----LAQALEYCTSKGRALYHDLNAYRILF 189
L M K + L +LH +A + Y S+ ++ DL L
Sbjct: 98 LRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ-HFVHRDLATRNCLV 156
Query: 190 DEDGNPRLSTFGLMKNSRDGKSYSTN-----------LAFTPPEYLRTGRVTPESVIYSF 238
G L G SRD YST+ + + PPE + + T ES ++SF
Sbjct: 157 ---GANLLVKIGDFGMSRD--VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSF 211
Query: 239 GTLLLDLLS-GK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 293
G +L ++ + GK + + ++ I + C + E+ + C
Sbjct: 212 GVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPK---------EVYDIMLGCW 262
Query: 294 QYEPRERPNPKSLVTALSPLQKETEV 319
Q EP++R N K + L L K T +
Sbjct: 263 QREPQQRLNIKEIYKILHALGKATPI 288
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 6e-07
Identities = 50/225 (22%), Positives = 102/225 (45%), Gaps = 24/225 (10%)
Query: 105 RSVGQLRNNRLTNLL---GCCCEGDER--LLVAEYMPNETLAKHLFHWETHPMKWAMRLR 159
+ + LRN N++ G C E L+ E++P+ +L ++L + + +L+
Sbjct: 55 KEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNK-INLKQQLK 113
Query: 160 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST----- 214
+ + + ++Y S+ + ++ DL A +L + + ++ FGL K K Y T
Sbjct: 114 YAVQICKGMDYLGSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDL 172
Query: 215 --NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHIPPSHALDLIRDRNLQM-- 267
+ + PE L + S ++SFG L +LL+ + P + L +I + QM
Sbjct: 173 DSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTV 232
Query: 268 --LTDSCLEGQ---FTDDDGTELVRLASRCLQYEPRERPNPKSLV 307
L EG+ + E+ +L +C +++P +R ++L+
Sbjct: 233 TRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLI 277
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|238112 cd00189, TPR, Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and Cdc27p components of the cyclosome/APC, the Pex5p/Pas10p receptor for peroxisomal targeting signals, the Tom70p co-receptor for mitochondrial targeting signals, Ser/Thr phosphatase 5C and the p110 subunit of O-GlcNAc transferase; three copies of the repeat are present here | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 6e-07
Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
Query: 386 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 445
G++ ++ D +A+E Y + ++ + Y + Y ++AL D +A
Sbjct: 4 LNLGNLYYKLGDYDEALEYYEKALELDPD-NADAYYNLAAAYYKLGKYEEALEDYEKALE 62
Query: 446 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAK 483
+ P A Y A +G EA A ++ L+
Sbjct: 63 LDPDNAKAYYNLGLAYYKLGKYEEALEAYEKALELDPN 100
|
Length = 100 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 50.8 bits (121), Expect = 7e-07
Identities = 58/263 (22%), Positives = 107/263 (40%), Gaps = 38/263 (14%)
Query: 101 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR--- 157
+E + +G+ +N + NLLG C + ++ EY L ++L M ++
Sbjct: 68 MEMMKMIGKHKN--IINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCK 125
Query: 158 -----------LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 206
+ +A+ +EY S+ + ++ DL A +L ED +++ FGL ++
Sbjct: 126 LPEEQLTFKDLVSCAYQVARGMEYLASQ-KCIHRDLAARNVLVTEDNVMKIADFGLARDV 184
Query: 207 RDGKSY--STN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG-----KHIPPSH 255
+ Y +TN + + PE L T +S ++SFG LL ++ + IP
Sbjct: 185 HNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 244
Query: 256 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315
L+++ + +C EL + C P +RP K LV L +
Sbjct: 245 LFKLLKEGHRMDKPANCTH---------ELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295
Query: 316 ETEVPSHVLMGIPHSASVSPLSP 338
T ++ + +P SP P
Sbjct: 296 VTSTDEYLDLSVPFE-QYSPGCP 317
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 8e-07
Identities = 52/242 (21%), Positives = 94/242 (38%), Gaps = 26/242 (10%)
Query: 84 IAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 142
+AVK D FL EA + + + + L+G E R ++ E M L
Sbjct: 39 VAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKS 98
Query: 143 HLFHWE---THPMKWAMR--LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPR- 196
L P M+ L +A+ +Y ++ D+ A L G R
Sbjct: 99 FLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN-HFIHRDIAARNCLLTCKGPGRV 157
Query: 197 --LSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG 248
++ FG+ ++ Y + + PPE G T ++ ++SFG LL ++ S
Sbjct: 158 AKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSL 217
Query: 249 KHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDG--TELVRLASRCLQYEPRERPNPKS 305
++P P N +++ G+ G + R+ + C Q+ P +RPN +
Sbjct: 218 GYMPYPGR-------TNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFAT 270
Query: 306 LV 307
++
Sbjct: 271 IL 272
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 8e-07
Identities = 63/259 (24%), Positives = 105/259 (40%), Gaps = 27/259 (10%)
Query: 73 VYKG---KLENQR-RIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGDE 127
VY+G EN++ +AVK P R+ FL+EA + Q + + L+G E +
Sbjct: 22 VYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NP 80
Query: 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 187
+V E P L +L + + A + L+ AL Y SK R ++ D+ A +
Sbjct: 81 VWIVMELAPLGELRSYL-QVNKYSLDLASLILYSYQLSTALAYLESK-RFVHRDIAARNV 138
Query: 188 LFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP-----PEYLRTGRVTPESVIYSFGTLL 242
L +L FGL + D Y + P PE + R T S ++ FG +
Sbjct: 139 LVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 198
Query: 243 LDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 297
++L G + + + I + + +C L L ++C Y+P
Sbjct: 199 WEILMLGVKPFQGVKNNDVIGRIENGERLPMPPNC---------PPTLYSLMTKCWAYDP 249
Query: 298 RERPNPKSLVTALSPLQKE 316
+RP L LS + +E
Sbjct: 250 SKRPRFTELKAQLSDILQE 268
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 49.7 bits (118), Expect = 1e-06
Identities = 56/243 (23%), Positives = 109/243 (44%), Gaps = 19/243 (7%)
Query: 73 VYKGKLENQRR--IAVKRFNRMAWPDPRQFLEEARSV-GQLRNNRLTNLLGCCCEGDERL 129
VYKG ++N+ + +A+K + D + +++ +V Q + +T G +G +
Sbjct: 20 VYKG-IDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLW 78
Query: 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 189
++ EY+ + L + P++ ++ + + L+Y S+ R ++ D+ A +L
Sbjct: 79 IIMEYLGGGSALDLL---KPGPLEETYIATILREILKGLDYLHSE-RKIHRDIKAANVLL 134
Query: 190 DEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDL 245
E G+ +L+ FG+ D + TP PE ++ ++ I+S G ++L
Sbjct: 135 SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIEL 194
Query: 246 LSGKHIPPSHALDLIRDRNL-QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 304
G+ PP+ L +R L + LEGQ++ CL +PR RP K
Sbjct: 195 AKGE--PPNSDLHPMRVLFLIPKNSPPTLEGQYS----KPFKEFVEACLNKDPRFRPTAK 248
Query: 305 SLV 307
L+
Sbjct: 249 ELL 251
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 1e-06
Identities = 60/257 (23%), Positives = 103/257 (40%), Gaps = 51/257 (19%)
Query: 84 IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 142
+AVK A + R FL+E + + +L++ + LLG C + D ++ EYM N L +
Sbjct: 49 VAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQ 108
Query: 143 HLFH--------------WETHPM---KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 185
L H + ++ L V L +A ++Y +S ++ DL
Sbjct: 109 FLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN-FVHRDLATR 167
Query: 186 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPP------EYLRTGRVTPESVIYSFG 239
L E+ +++ FG+ +N G Y P E + G+ T S +++FG
Sbjct: 168 NCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFG 227
Query: 240 TLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL---EGQFTDDDGTE------------ 284
L ++L L +++ LTD + G+F D G +
Sbjct: 228 VTLWEILM-----------LCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQG 276
Query: 285 LVRLASRCLQYEPRERP 301
L L +C + RERP
Sbjct: 277 LYELMLQCWSRDCRERP 293
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 60/250 (24%), Positives = 103/250 (41%), Gaps = 31/250 (12%)
Query: 72 VVYKG-KLENQRRIAVKRFNRMAWPDPRQFLEEARS----VGQLRNNRLTNLLGCCCEGD 126
VVYKG LE +A+K+ + + L+ + L++ + +G D
Sbjct: 15 VVYKGLNLETGDFVAIKQISLEK--IKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSD 72
Query: 127 ERLLVAEYMPNETLAKHLFHWETHP-MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 185
++ EY N +L + + + P A+ + VL Q L Y +G ++ D+ A
Sbjct: 73 SLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVL---QGLAYLHEQG-VIHRDIKAA 128
Query: 186 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTL 241
IL +DG +L+ FG+ D ++ TP PE + + S I+S G
Sbjct: 129 NILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCT 188
Query: 242 LLDLLSGKHIPPSHALDLIRDRN-----LQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 296
+++LL+G PP + D N +++ D + EL +C Q +
Sbjct: 189 VIELLTGN--PPYY------DLNPMAALFRIVQDDHPP--LPEGISPELKDFLMQCFQKD 238
Query: 297 PRERPNPKSL 306
P RP K L
Sbjct: 239 PNLRPTAKQL 248
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 2e-06
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 19/200 (9%)
Query: 66 GEKAPNVVYKGK-LENQRRIAVKRFNR--MAWPDPRQFLEEARSVGQLRNNRLTNLLGCC 122
GE VVYK + +A+K+ + P+ L E + + +L + + LL
Sbjct: 8 GEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVF 67
Query: 123 CEGDERLLVAEYMPNETLAKHLFHWET----HPMKWAMRLRVVLHLAQALEYCTSKGRAL 178
+ LV E+M + L K + + +K + L Q L +C S G L
Sbjct: 68 RHKGDLYLVFEFM-DTDLYKLIKDRQRGLPESLIKSYL-----YQLLQGLAFCHSHG-IL 120
Query: 179 YHDLNAYRILFDEDGNPRLSTFGLMKNSR-DGKSYSTNLA---FTPPEYLRTGRVTPESV 234
+ DL +L + +G +L+ FGL ++ + Y+ + + PE L + V
Sbjct: 121 HRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPV 180
Query: 235 -IYSFGTLLLDLLSGKHIPP 253
I+S G + +LLS + + P
Sbjct: 181 DIWSVGCIFAELLSRRPLFP 200
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 2e-06
Identities = 55/225 (24%), Positives = 99/225 (44%), Gaps = 26/225 (11%)
Query: 100 FLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETH-PMKWAMRL 158
F E A + Q+ + L + G C G E ++V E++ + L L + P+ W ++
Sbjct: 63 FFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAW--KI 120
Query: 159 RVVLHLAQALEYCTSK----GRALYHDLNAYRILFDEDGNP--RLSTFGLMKNSRDGKSY 212
V LA AL Y K G ++ R+ E +P +LS G+ + +
Sbjct: 121 TVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSREER 180
Query: 213 STNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQ 266
+ + PE + G ++ + +SFGT LL++ +P PS + ++ +
Sbjct: 181 VERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK-ERFYEKKHR 239
Query: 267 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 311
+ SC EL L S+CL YEP +RP+ ++++ L+
Sbjct: 240 LPEPSC----------KELATLISQCLTYEPTQRPSFRTILRDLT 274
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 3e-06
Identities = 56/260 (21%), Positives = 97/260 (37%), Gaps = 43/260 (16%)
Query: 73 VYKGKL-------ENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLTNLLGCCCE 124
VY+G R+AVK + A + +FL+EA + + + LLG C
Sbjct: 11 VYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL 70
Query: 125 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT-----SKGRALY 179
+ + ++ E M L +L + L + L L+ + ++
Sbjct: 71 NEPQYIIMELMEGGDLLSYLRDARVERFGPPL-LTLKELLDICLDVAKGCVYLEQMHFIH 129
Query: 180 HDLNAYRILFDEDGNPR-----LSTFGLMKNSRDGKSYST------NLAFTPPEYLRTGR 228
DL A L E G + FGL ++ Y + + PE L G+
Sbjct: 130 RDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGK 189
Query: 229 VTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQMLTDSCLEGQF------TDDD 281
T +S ++SFG L+ ++L+ P P+ N ++L G+ D
Sbjct: 190 FTTQSDVWSFGVLMWEILTLGQQPYPALN-------NQEVLQHVTAGGRLQKPENCPDK- 241
Query: 282 GTELVRLASRCLQYEPRERP 301
+ +L + C +P ERP
Sbjct: 242 ---IYQLMTNCWAQDPSERP 258
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 3e-06
Identities = 49/224 (21%), Positives = 93/224 (41%), Gaps = 16/224 (7%)
Query: 100 FLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLF-------HWETHPM 152
F E +L + + LLG C E + ++ EY L + L + P+
Sbjct: 55 FRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPL 114
Query: 153 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY 212
++ + +A +++ S R ++ DL A L ++S L K+ + + Y
Sbjct: 115 STKQKVALCTQIALGMDH-LSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYY 173
Query: 213 STN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM 267
L + PE ++ + +S ++SFG L+ ++ + +P L + L
Sbjct: 174 KLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFY---GLSDEEVLNR 230
Query: 268 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 311
L LE + + L +L +RC P++RP+ LV+AL
Sbjct: 231 LQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 48.0 bits (114), Expect = 3e-06
Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 20/212 (9%)
Query: 100 FLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLF-HWETHPMKWAMRL 158
F E A + Q+ + + L G C E ++V E++ L LF H ++ + +
Sbjct: 51 FFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPL--DLFMHRKSDVLTTPWKF 108
Query: 159 RVVLHLAQALEYCTSK----GRALYHDLNAYRILFDEDGNP--RLSTFGLMKNSRDGKSY 212
+V LA AL Y K G ++ R D + P +LS G+ +
Sbjct: 109 KVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQEC 168
Query: 213 STNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 271
+ + PE + + + + +SFGT L ++ IP ++D+ L +
Sbjct: 169 VERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIP-------LKDKTLAE-KER 220
Query: 272 CLEGQF--TDDDGTELVRLASRCLQYEPRERP 301
EGQ EL L + C+ Y+P +RP
Sbjct: 221 FYEGQCMLVTPSCKELADLMTHCMNYDPNQRP 252
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 48.5 bits (115), Expect = 4e-06
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 12/146 (8%)
Query: 125 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 184
GDE +V E++ L + H + + A V L + +AL ++G ++ D+ +
Sbjct: 89 GDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLKALSVLHAQG-VIHRDIKS 144
Query: 185 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 240
IL DG +LS FG +L TP PE + PE I+S G
Sbjct: 145 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGI 204
Query: 241 LLLDLLSGK----HIPPSHALDLIRD 262
++++++ G+ + PP A+ +IRD
Sbjct: 205 MVIEMVDGEPPYFNEPPLKAMKMIRD 230
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 4e-06
Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 37/235 (15%)
Query: 101 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHL---------FHWET-- 149
+E + +G+ +N + NLLG C + ++ EY L ++L + ++
Sbjct: 71 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIAR 128
Query: 150 ---HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-- 204
M + + +A+ +EY S+ + ++ DL A +L E+ +++ FGL +
Sbjct: 129 VPDEQMTFKDLVSCTYQVARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDV 187
Query: 205 NSRDGKSYSTN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSH 255
N+ D +TN + + PE L T +S ++SFG L+ ++ L G IP
Sbjct: 188 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 247
Query: 256 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 310
L+++ + +C EL + C P RP K LV L
Sbjct: 248 LFKLLKEGHRMDKPANCT---------NELYMMMRDCWHAIPSHRPTFKQLVEDL 293
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 5e-06
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 16/155 (10%)
Query: 160 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 219
++ + LEY S + ++ D+ A IL +E+G +L+ FG+ D + + T
Sbjct: 104 ILYQTLKGLEYLHSN-KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGT 162
Query: 220 P----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLTDS 271
P PE ++ ++ I+S G +++ GK I P A+ +I ++ L+D
Sbjct: 163 PFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDP 222
Query: 272 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 306
+ E +CL +P ERP+ L
Sbjct: 223 -------EKWSPEFNDFVKKCLVKDPEERPSAIQL 250
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 47.1 bits (112), Expect = 9e-06
Identities = 60/267 (22%), Positives = 103/267 (38%), Gaps = 47/267 (17%)
Query: 68 KAPNVVYKGKLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLTNLLGCCCEGD 126
+AP ++ E +AVK A D + F EA + + + + LLG C G
Sbjct: 25 RAPGLL---PYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGK 81
Query: 127 ERLLVAEYMPNETLAKHLFHWETH--------------------PMKWAMRLRVVLHLAQ 166
L+ EYM L + L H P+ +L + +A
Sbjct: 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAA 141
Query: 167 ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTP 220
+ Y S+ + ++ DL L E+ +++ FGL +N Y + + + P
Sbjct: 142 GMAY-LSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMP 200
Query: 221 PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD------LIRDRNLQMLTDSCLE 274
PE + R T ES ++++G +L ++ S + P + + +RD N+ D+C
Sbjct: 201 PESIFYNRYTTESDVWAYGVVLWEIFS-YGMQPYYGMAHEEVIYYVRDGNVLSCPDNC-- 257
Query: 275 GQFTDDDGTELVRLASRCLQYEPRERP 301
EL L C P +RP
Sbjct: 258 -------PLELYNLMRLCWSKLPSDRP 277
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 1e-05
Identities = 37/164 (22%), Positives = 67/164 (40%), Gaps = 25/164 (15%)
Query: 162 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 215
+ +A + Y SK R ++ DL A IL D ++ FGLM+ + +
Sbjct: 104 VQIANGMRYLESK-RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKV 162
Query: 216 -LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-----GKHIPPSHALDLIRDRNLQMLT 269
A+ PE LRT + S ++ FG L ++ + + S L I D+ + L
Sbjct: 163 PFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKI-DKEGERLE 221
Query: 270 --DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 311
++C + ++ + +C + P +RP +L L
Sbjct: 222 RPEACPQ---------DIYNVMLQCWAHNPADRPTFAALREFLP 256
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 46.8 bits (111), Expect = 1e-05
Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 12/248 (4%)
Query: 66 GEKAPNVVYKG-KLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 124
G+ A VY + + +A+K+ N P + E + + ++ + N L
Sbjct: 28 GQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLV 87
Query: 125 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 184
GDE +V EY+ +L + + A R L QALE+ S ++ D+ +
Sbjct: 88 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQ-VIHRDIKS 143
Query: 185 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 240
IL DG+ +L+ FG +S + + TP PE + P+ I+S G
Sbjct: 144 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 203
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
+ ++++ G+ PP + +R L + T+ E Q + +RCL+ + +R
Sbjct: 204 MAIEMVEGE--PPYLNENPLRALYL-IATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR 260
Query: 301 PNPKSLVT 308
+ K L+
Sbjct: 261 GSAKELLQ 268
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 1e-05
Identities = 46/197 (23%), Positives = 79/197 (40%), Gaps = 31/197 (15%)
Query: 125 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 184
GDE +V E++ L + H + + A VL +AL + ++G ++ D+ +
Sbjct: 88 GDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLAVL---KALSFLHAQG-VIHRDIKS 143
Query: 185 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 240
IL DG +LS FG +L TP PE + E I+S G
Sbjct: 144 DSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGI 203
Query: 241 LLLDLLSGK----HIPPSHALDLIRD------RNLQMLTDSCLEGQFTDDDGTELVRLAS 290
++++++ G+ + PP A+ IRD +NL ++ L
Sbjct: 204 MVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVS-------------PRLRSFLD 250
Query: 291 RCLQYEPRERPNPKSLV 307
R L +P +R L+
Sbjct: 251 RMLVRDPAQRATAAELL 267
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 46.8 bits (112), Expect = 1e-05
Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 28/208 (13%)
Query: 73 VYKGK-LENQRRIAVKRFN--RMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER- 128
VYK + + +A+K+ P + E + + +LR+ + L +
Sbjct: 15 VYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGS 74
Query: 129 -LLVAEYMPNE---TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 184
+V EYM ++ L + +K M+ L + L+Y S G L+ D+
Sbjct: 75 IYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMK-----QLLEGLQYLHSNG-ILHRDIKG 128
Query: 185 YRILFDEDGNPRLSTFGLMK--NSRDGKSYSTNLAFT----PPEYLRTG--RVTPESVIY 236
IL + DG +L+ FGL + R+ Y TN T PPE L G R PE ++
Sbjct: 129 SNILINNDGVLKLADFGLARPYTKRNSADY-TNRVITLWYRPPELL-LGATRYGPEVDMW 186
Query: 237 SFGTLLLDLLSGKHIPP----SHALDLI 260
S G +L +L GK I L+ I
Sbjct: 187 SVGCILAELFLGKPIFQGSTELEQLEKI 214
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 1e-05
Identities = 58/235 (24%), Positives = 97/235 (41%), Gaps = 37/235 (15%)
Query: 101 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR--- 157
+E + +G+ +N + NLLG C + ++ EY L ++L M++
Sbjct: 74 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQ 131
Query: 158 -----------LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 206
+ +A+ +EY SK + ++ DL A +L ED +++ FGL ++
Sbjct: 132 VPEEQLSFKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDI 190
Query: 207 RDGKSY--STN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGKHIPPSHALD 258
Y +TN + + PE L T +S ++SFG LL ++ L G P +
Sbjct: 191 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 250
Query: 259 LIRDRNLQMLTDSCLEGQFTDDDGT---ELVRLASRCLQYEPRERPNPKSLVTAL 310
L + +L EG D EL + C P +RP K LV L
Sbjct: 251 LFK-----LLK----EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 296
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 1e-05
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 164 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYS--TNLAFT 219
LA AL++ S G +Y DL IL DE+G+ +L+ FGL K S D K+YS + +
Sbjct: 107 LALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYM 165
Query: 220 PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 252
PE + T + +SFG L+ ++L+G +P
Sbjct: 166 APEVVNRRGHTQSADWWSFGVLMFEMLTG-SLP 197
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 1e-05
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 23/198 (11%)
Query: 64 EHGEKAPNVVYKGKLENQRR----IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNL 118
E GE V++G L+ R +A+K RQ FL EA +GQ ++ + L
Sbjct: 17 EFGE-----VFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRL 71
Query: 119 LGCCCEGDERLLVAEYMPNETLAKHL--FHWETHPMKWAMRLRVVLHLAQALEYCTSKGR 176
G + +++ EYM N L K+L E + LR +A ++Y S
Sbjct: 72 EGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLR---GIAAGMKY-LSDMN 127
Query: 177 ALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTN-----LAFTPPEYLRTGRV 229
++ DL A IL + + ++S FGL + D +Y+T+ + +T PE + +
Sbjct: 128 YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKF 187
Query: 230 TPESVIYSFGTLLLDLLS 247
T S ++SFG ++ +++S
Sbjct: 188 TSASDVWSFGIVMWEVMS 205
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 1e-05
Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 13/150 (8%)
Query: 115 LTNLLGCCCEGDERLL-VAEYMPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCT 172
LT+L C + E L V EY+ L +FH ++ H + L++
Sbjct: 58 LTHLY-CTFQTKENLFFVMEYLNGGDL---MFHIQSCHKFDLPRATFYAAEIICGLQFLH 113
Query: 173 SKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGR 228
SKG +Y DL IL D DG+ +++ FG+ K + G + + TP PE L +
Sbjct: 114 SKG-IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQK 172
Query: 229 VTPESVIYSFGTLLLDLLSGKHIPPSHALD 258
+SFG LL ++L G+ P H D
Sbjct: 173 YNTSVDWWSFGVLLYEMLIGQ--SPFHGHD 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 2e-05
Identities = 53/250 (21%), Positives = 98/250 (39%), Gaps = 44/250 (17%)
Query: 84 IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 142
+AVK R FL+E + + +L+N + LLG C D ++ EYM N L +
Sbjct: 47 VAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQ 106
Query: 143 HLFHWETHP----------MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 192
L E + A L + + +A ++Y S ++ DL L
Sbjct: 107 FLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN-FVHRDLATRNCLVGNH 165
Query: 193 GNPRLSTFGLMKNSRDGKSYSTNLAFTPP------EYLRTGRVTPESVIYSFGTLLLDLL 246
+++ FG+ +N G Y P E + G+ T S +++FG L ++
Sbjct: 166 YTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMF 225
Query: 247 SGKHIPPSHALDLIRDRNLQMLTDSCL---EGQFTDDDGTE------------LVRLASR 291
+ L +++ +L+D + G+F + G + + +L R
Sbjct: 226 T-----------LCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMR 274
Query: 292 CLQYEPRERP 301
C + ++RP
Sbjct: 275 CWSRDIKDRP 284
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 2e-05
Identities = 54/225 (24%), Positives = 90/225 (40%), Gaps = 35/225 (15%)
Query: 111 RNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHL--------------FHWETHPMKWAM 156
++ + NLLG C + ++ EY L + L + +
Sbjct: 76 KHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKD 135
Query: 157 RLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--ST 214
+ +A+ +EY S+ R ++ DL A +L ED +++ FGL + D Y ++
Sbjct: 136 LVSCAYQVARGMEYLESR-RCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTS 194
Query: 215 N----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGKH---IPPSHALDLIRDRNL 265
N + + PE L T +S ++SFG L+ ++ L G IP L+R+ +
Sbjct: 195 NGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHR 254
Query: 266 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 310
+C EL L C P +RP K LV AL
Sbjct: 255 MDKPSNCTH---------ELYMLMRECWHAVPTQRPTFKQLVEAL 290
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 46.0 bits (109), Expect = 2e-05
Identities = 55/240 (22%), Positives = 98/240 (40%), Gaps = 21/240 (8%)
Query: 68 KAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 127
KA +Y K +++R+ ++ +MA + ++ LE+ S R L E +
Sbjct: 15 KATGKMYACKKLDKKRLKKRKGEQMALNE-KKILEKVSS-------RFIVSLAYAFETKD 66
Query: 128 RL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQ---ALEYCTSKGRALYHDLN 183
L LV M L H+++ A R + + AQ LE+ + R +Y DL
Sbjct: 67 DLCLVMTLMNGGDLKYHIYNVGEPGFPEA---RAIFYAAQIICGLEHLHQR-RIVYRDLK 122
Query: 184 AYRILFDEDGNPRLSTFGL---MKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
+L D+ GN R+S GL +K + K + + PE L+ ++ G
Sbjct: 123 PENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGC 182
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
L ++++G P + + L+ T + ++ D E L LQ +P +R
Sbjct: 183 TLYEMIAG-RSPFRQRKEKVEKEELKRRTLE-MAVEYPDKFSPEAKDLCEALLQKDPEKR 240
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 2e-05
Identities = 58/253 (22%), Positives = 105/253 (41%), Gaps = 24/253 (9%)
Query: 76 GKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135
G L N R + F+ P+Q V Q R +R G +L + +
Sbjct: 97 GNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIE------AGQASVLFSRFQ 150
Query: 136 PNETLAKHLFH-----WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 190
P+ + + + W++ P+ + +A+ +E+ S+ + ++ DL A IL
Sbjct: 151 PSTSGSTNPPQETDDLWKS-PLTMEDLICYSFQVARGMEFLASR-KCIHRDLAARNILLS 208
Query: 191 EDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLD 244
E+ ++ FGL ++ Y L + PE + T +S ++SFG LL +
Sbjct: 209 ENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWE 268
Query: 245 LLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 303
+ S G P ++ + Q L D + ++ E+ R+ C Q +P+ERP
Sbjct: 269 IFSLGASPYPGVQIN---EEFCQRLKDGT-RMRAPENATPEIYRIMLACWQGDPKERPTF 324
Query: 304 KSLVTALSPLQKE 316
+LV L L +E
Sbjct: 325 SALVEILGDLLQE 337
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 2e-05
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 14/184 (7%)
Query: 73 VYKGKLENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131
VY K + +AVK + ++FL EA + QL + + L+G C +G+ +LV
Sbjct: 15 VYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVC-KGEPLMLV 73
Query: 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLH-LAQALEYCTSKGRALYHDLNAYRILFD 190
E P L K+L + L+ + H +A + Y SK ++ DL A +L
Sbjct: 74 MELAPLGPLLKYL---KKRREIPVSDLKELAHQVAMGMAYLESK-HFVHRDLAARNVLLV 129
Query: 191 EDGNPRLSTFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVTPESVIYSFGTLLL 243
++S FG+ + G Y L + PE + G+ + +S ++S+G L
Sbjct: 130 NRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLW 189
Query: 244 DLLS 247
+ S
Sbjct: 190 EAFS 193
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 2e-05
Identities = 57/235 (24%), Positives = 95/235 (40%), Gaps = 37/235 (15%)
Query: 101 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM--------------PNETLAKHLFH 146
+E + +G+ +N + NLLG C + +V EY P E +
Sbjct: 66 MEMMKMIGKHKN--IINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPR 123
Query: 147 WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 206
+ + +A+ +E+ SK + ++ DL A +L ED +++ FGL ++
Sbjct: 124 PPEETLTQKDLVSFAYQVARGMEFLASK-KCIHRDLAARNVLVTEDHVMKIADFGLARDI 182
Query: 207 RDGKSY--STN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGKHIP--PSHA 256
Y +TN + + PE L T +S ++SFG LL ++ L G P P
Sbjct: 183 HHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 242
Query: 257 L-DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 310
L L+++ +C + EL L C P +RP K LV L
Sbjct: 243 LFKLLKEGYRMEKPQNCTQ---------ELYHLMRDCWHEVPSQRPTFKQLVEDL 288
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 3e-05
Identities = 37/152 (24%), Positives = 72/152 (47%), Gaps = 13/152 (8%)
Query: 109 QLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQAL 168
+L++ + LG + D + EY+P ++A L ++ + V + + L
Sbjct: 62 ELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEE--TLVRNFVRQILKGL 119
Query: 169 EYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGK------SYSTNLAF 218
Y ++G ++ D+ IL D G ++S FG+ K NS K S ++ +
Sbjct: 120 NYLHNRG-IIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFW 178
Query: 219 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH 250
PE ++ T ++ I+S G L++++L+GKH
Sbjct: 179 MAPEVVKQTSYTRKADIWSLGCLVVEMLTGKH 210
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 45.4 bits (107), Expect = 3e-05
Identities = 66/286 (23%), Positives = 113/286 (39%), Gaps = 58/286 (20%)
Query: 64 EHGEKAPNVVYKGKLEN------QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTN 117
E GE A V+ + N + +AVK + + F EA + L++ +
Sbjct: 12 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVR 71
Query: 118 LLGCCCEGDERLLVAEYMPNETLAKHLFHWETH----------------PMKWAMRLRVV 161
G C EG L+V EYM + L + L +H + L +
Sbjct: 72 FYGVCTEGRPLLMVFEYMRHGDLNRFL---RSHGPDAKILAGGEDVAPGQLTLGQMLAIA 128
Query: 162 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 215
+A + Y S ++ DL L + ++ FG+ SRD YST+
Sbjct: 129 SQIASGMVYLASL-HFVHRDLATRNCLVGQGLVVKIGDFGM---SRD--IYSTDYYRVGG 182
Query: 216 -----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GK----HIPPSHALDLI-RDRN 264
+ + PPE + + T ES I+SFG +L ++ + GK + + A++ I + R
Sbjct: 183 RTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRE 242
Query: 265 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 310
L+ +C E+ + C Q EP++R K + + L
Sbjct: 243 LER-PRTC---------PPEVYAIMQGCWQREPQQRMVIKDIHSRL 278
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 45.7 bits (108), Expect = 3e-05
Identities = 47/159 (29%), Positives = 72/159 (45%), Gaps = 13/159 (8%)
Query: 101 LEEARSVGQLRNNRLTNLLGCCCEGDERLL-VAEYMPNETLAKHLFHWETHPMKWAMRLR 159
+ E R + RN+ L CC + +RL V E++ L +FH + R R
Sbjct: 43 MTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFDEARAR 99
Query: 160 V-VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDGKSYSTNLA 217
+ AL + KG +Y DL +L D +G+ +L+ FG+ K +GK+ ST
Sbjct: 100 FYAAEITSALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTST-FC 157
Query: 218 FTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 252
TP PE L+ P ++ G LL ++L G H P
Sbjct: 158 GTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCG-HAP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 4e-05
Identities = 59/281 (20%), Positives = 109/281 (38%), Gaps = 42/281 (14%)
Query: 62 VSEHGEKAPNVVYKGKL------ENQRRIAVKRF-NRMAWPDPRQFLEEARSVGQLRNNR 114
+ E GE VYKG L E + +A+K ++ P +F EA +L++
Sbjct: 10 MEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPN 69
Query: 115 LTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHP----------MKWAMR----LRV 160
+ LLG + ++ Y + L + L H +K + + +
Sbjct: 70 IVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHI 129
Query: 161 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST------ 214
V +A +E+ +S ++ DL +L + N ++S GL + Y
Sbjct: 130 VTQIAAGMEFLSSH-HVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLL 188
Query: 215 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLT 269
+ + PE + G+ + +S I+S+G +L ++ S P +++IR+R +
Sbjct: 189 PIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLPCP 248
Query: 270 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 310
D C +T L C P RP K + + L
Sbjct: 249 DDCPAWVYT---------LMLECWNEFPSRRPRFKDIHSRL 280
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 4e-05
Identities = 59/246 (23%), Positives = 105/246 (42%), Gaps = 28/246 (11%)
Query: 84 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER--LLVAEYMPNETLA 141
+AVK+ R F E + L+++ + G C R LV EY+P +L
Sbjct: 36 VAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLR 95
Query: 142 KHLFHWETHPMKWAMRLRVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLS 198
+L + H + R +++L+ +Q +EY SK R ++ DL IL + + ++
Sbjct: 96 DYL---QKHRERLDHR-KLLLYASQICKGMEYLGSK-RYVHRDLATRNILVESENRVKIG 150
Query: 199 TFGLMKNSRDGKSYST-------NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI 251
FGL K K Y + + PE L + + S ++SFG +L +L +
Sbjct: 151 DFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDK 210
Query: 252 ---PPSHALDLI-RDRNLQMLTDSCLE-----GQFTDDDG--TELVRLASRCLQYEPRER 300
PP+ + ++ D+ QM+ +E G+ G E+ + C +P +R
Sbjct: 211 SCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQR 270
Query: 301 PNPKSL 306
P+ L
Sbjct: 271 PSFSEL 276
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 5e-05
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 10/126 (7%)
Query: 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 189
L+ +Y+ L HL+ E H + +R+ + + AL+ + +Y D+ IL
Sbjct: 82 LILDYVNGGELFTHLYQRE-HFTESEVRV-YIAEIVLALD-HLHQLGIIYRDIKLENILL 138
Query: 190 DEDGNPRLSTFGLMK-----NSRDGKSYSTNLAFTPPEYLRTGRVTPESVI--YSFGTLL 242
D +G+ L+ FGL K S+ + + PE +R G + + +S G L
Sbjct: 139 DSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLT 198
Query: 243 LDLLSG 248
+LL+G
Sbjct: 199 FELLTG 204
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 44.8 bits (107), Expect = 5e-05
Identities = 43/156 (27%), Positives = 65/156 (41%), Gaps = 28/156 (17%)
Query: 164 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF----- 218
L AL+Y S+ + L+ D+ I +G +L FG+ K S+ +
Sbjct: 112 LCLALKYLHSR-KILHRDIKPQNIFLTSNGLVKLGDFGI------SKVLSSTVDLAKTVV 164
Query: 219 -TP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 273
TP PE + +S I+S G +L +L + KH P NL L L
Sbjct: 165 GTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKH--PFEG------ENLLELALKIL 216
Query: 274 EGQFTDDD---GTELVRLASRCLQYEPRERPNPKSL 306
+GQ+ +EL L S LQ +P ERP+ +
Sbjct: 217 KGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQI 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 44.7 bits (105), Expect = 5e-05
Identities = 55/246 (22%), Positives = 103/246 (41%), Gaps = 25/246 (10%)
Query: 73 VYKGKLEN--QRRIAVKRFNRMAWPDPRQFLEEARSV-GQLRNNRLTNLLGCCCEGDERL 129
V+KG ++N Q+ +A+K + D + +++ +V Q + +T G + +
Sbjct: 20 VFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLW 78
Query: 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 189
++ EY+ + L E P+ ++ + + L+Y S+ + ++ D+ A +L
Sbjct: 79 IIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSE-KKIHRDIKAANVLL 134
Query: 190 DEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDL 245
E G +L+ FG+ D + TP PE ++ ++ I+S G ++L
Sbjct: 135 SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 194
Query: 246 LSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 301
G+ + P L LI N LEG ++ L CL EP RP
Sbjct: 195 AKGEPPHSELHPMKVLFLIPKNN-----PPTLEGNYS----KPLKEFVEACLNKEPSFRP 245
Query: 302 NPKSLV 307
K L+
Sbjct: 246 TAKELL 251
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 6e-05
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 168 LEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEY 223
L++ SKG +Y DL ++ D DG+ +++ FG+ K + G + ++ TP PE
Sbjct: 109 LQFLHSKG-IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEI 167
Query: 224 LRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD 258
L+ + T +SFG LL ++L G+ P H D
Sbjct: 168 LQGLKYTFSVDWWSFGVLLYEMLIGQ--SPFHGDD 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 6e-05
Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 17/161 (10%)
Query: 98 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET----LAKHLFHWETHPMK 153
R FL EA +GQ + + +L G + ++V EYM N + L KH + +
Sbjct: 50 RDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLV 109
Query: 154 WAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KS 211
+R +A ++Y + G ++ DL A IL + + ++S FGL + D +
Sbjct: 110 GMLR-----GIASGMKYLSDMG-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAA 163
Query: 212 YSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 247
Y+T + +T PE + + T S ++S+G ++ +++S
Sbjct: 164 YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 204
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 6e-05
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 12/146 (8%)
Query: 125 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 184
GDE +V E++ L + H + + A V L + +AL Y ++G ++ D+ +
Sbjct: 91 GDELWVVMEFLEGGALTDIVTHTRMNEEQIAT---VCLSVLRALSYLHNQG-VIHRDIKS 146
Query: 185 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 240
IL DG +LS FG +L TP PE + E I+S G
Sbjct: 147 DSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGI 206
Query: 241 LLLDLLSGK----HIPPSHALDLIRD 262
++++++ G+ + PP A+ IRD
Sbjct: 207 MVIEMIDGEPPYFNEPPLQAMRRIRD 232
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 44.4 bits (105), Expect = 7e-05
Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 25/171 (14%)
Query: 156 MRLRVVLHLAQA----LEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL---MKNSRD 208
+ + ++ +A A L Y + R ++ D+ IL + G +L FG+ + NS
Sbjct: 100 IPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIA 159
Query: 209 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK------------HIPPSHA 256
T+ + PE ++ G+ T +S ++S G +++L GK P
Sbjct: 160 DTFVGTS-TYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGI 218
Query: 257 LDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 307
LDL++ + +Q F +D L CL +P ERP P+ L
Sbjct: 219 LDLLQ-QIVQEPPPRLPSSDFPED----LRDFVDACLLKDPTERPTPQQLC 264
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 7e-05
Identities = 51/200 (25%), Positives = 83/200 (41%), Gaps = 43/200 (21%)
Query: 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQ---ALEYCTSKGRALYHDLNAYR 186
LV EY+P LA L + + A +++A+ ALEY S G ++ DL
Sbjct: 70 LVMEYLPGGDLASLLENVGSLDEDVA-----RIYIAEIVLALEYLHSNG-IIHRDLKPDN 123
Query: 187 ILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVI---- 235
IL D +G+ +L+ FGL K + + P+Y+ PE ++
Sbjct: 124 ILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYI-----APEVILGQGH 178
Query: 236 ------YSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG--QFTDDDGT--EL 285
+S G +L + L G IPP H + + + L G ++ +D E
Sbjct: 179 SKTVDWWSLGCILYEFLVG--IPPFH------GETPEEIFQNILNGKIEWPEDVEVSDEA 230
Query: 286 VRLASRCLQYEPRERPNPKS 305
+ L S+ L +P +R KS
Sbjct: 231 IDLISKLLVPDPEKRLGAKS 250
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 1e-04
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 159 RVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN 215
R + AQ LE+ + R +Y DL +L D DGN R+S GL +DG+S +
Sbjct: 98 RACFYTAQIISGLEHLHQR-RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKG 156
Query: 216 LAFTP----PEYLRTGRVTPESVIY-SFGTLLLDLLSGK 249
A TP PE L+ G SV Y + G L ++++ +
Sbjct: 157 YAGTPGFMAPELLQ-GEEYDFSVDYFALGVTLYEMIAAR 194
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 1e-04
Identities = 57/246 (23%), Positives = 104/246 (42%), Gaps = 32/246 (13%)
Query: 83 RIAVKRFNRMAWPDPRQFL-EEARSVGQLRNN-RLTNLLGCCCEGDERLLVAEYMPNETL 140
++AVK A R+ L E + + L N+ + NLLG C G L++ EY L
Sbjct: 67 KVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDL 126
Query: 141 AKHLFHWETHPMKWAMRLRVVLH----LAQALEYCTSKGRALYHDLNAYRILFDEDGNPR 196
L + + L +L +A+ + + SK ++ DL A +L +
Sbjct: 127 LNFL-RRKRESF---LTLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNVLLTHGKIVK 181
Query: 197 LSTFGLMKNSRDGKSY-STNLAFTP-----PEYLRTGRVTPESVIYSFGTLLLDLLS-GK 249
+ FGL ++ + +Y A P PE + T ES ++S+G LL ++ S G
Sbjct: 182 ICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGS 241
Query: 250 HIPPSHALD-----LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 304
+ P +D LI++ +M + + + ++++ C +P +RP K
Sbjct: 242 NPYPGMPVDSKFYKLIKE-GYRMA-----QPEHAPAEIYDIMK---TCWDADPLKRPTFK 292
Query: 305 SLVTAL 310
+V +
Sbjct: 293 QIVQLI 298
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 2e-04
Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 29/222 (13%)
Query: 98 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHL--FHWETHPMKWA 155
+Q +E + +L++ + LG E D + E +P +LAK L + P+
Sbjct: 47 KQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVI-R 105
Query: 156 MRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS---RDGKSY 212
+ R +L LEY + ++ D+ IL D +G +L+ FG+ K KS+
Sbjct: 106 LYTRQIL---LGLEYLHDRN-TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSF 161
Query: 213 STNLAFTPPEYL-RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI-------RDRN 264
+ + PE + + G + I+S G +L++ +GK PP L+ + R +
Sbjct: 162 KGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGK--PPWSQLEGVAAVFKIGRSKE 219
Query: 265 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 306
L + D D+ + + CLQ +P RP L
Sbjct: 220 LPPIPDH------LSDEAKDFILK---CLQRDPSLRPTAAEL 252
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 2e-04
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 11/135 (8%)
Query: 125 GDERLLVAEYMPN---ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHD 181
D LV EY+ +L K L P WA + + + +E +G ++ D
Sbjct: 69 KDYLYLVMEYLNGGDCASLIKTLGGL---PEDWAKQY--IAEVVLGVEDLHQRG-IIHRD 122
Query: 182 LNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTL 241
+ +L D+ G+ +L+ FGL +N + K + + PE + S +S G +
Sbjct: 123 IKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDYLAPETILGVGDDKMSDWWSLGCV 182
Query: 242 LLDLLSGKHIPPSHA 256
+ + L G PP HA
Sbjct: 183 IFEFLFG--YPPFHA 195
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 58/253 (22%), Positives = 108/253 (42%), Gaps = 21/253 (8%)
Query: 66 GEKAPNVVYKGKLENQ--RRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCC 123
GE A VYK + + +A+K+ R+ + + E + ++ + +
Sbjct: 28 GEGASGEVYKAT-DRATGKEVAIKKM-RLRKQNKELIINEILIMKDCKHPNIVDYYDSYL 85
Query: 124 EGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLN 183
GDE +V EYM +L + M V + Q LEY S+ ++ D+
Sbjct: 86 VGDELWVVMEYMDGGSLTDIITQNFV-RMNEPQIAYVCREVLQGLEYLHSQNV-IHRDIK 143
Query: 184 AYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFG 239
+ IL +DG+ +L+ FG KS ++ TP PE ++ P+ I+S G
Sbjct: 144 SDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLG 203
Query: 240 TLLLDLLSGK--HI--PPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 295
+ +++ G+ ++ PP AL LI + + L + + E ++CL
Sbjct: 204 IMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNP-------EKWSPEFKDFLNKCLVK 256
Query: 296 EPRERPNPKSLVT 308
+P +RP+ + L+
Sbjct: 257 DPEKRPSAEELLQ 269
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 2e-04
Identities = 55/193 (28%), Positives = 82/193 (42%), Gaps = 26/193 (13%)
Query: 68 KAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 127
K+ VY KL + +F + D F EE R + N+ L C + D+
Sbjct: 65 KSSQKVYAMKL-------LSKFEMIKRSDSAFFWEE-RDIMAFANSPWVVQLFCAFQDDK 116
Query: 128 RL-LVAEYMPNETLAKHLFHWETHPMKWA--MRLRVVLHLAQALEYCTSKGRALYHDLNA 184
L +V EYMP L + +++ P KWA VVL AL+ S G ++ D+
Sbjct: 117 YLYMVMEYMPGGDLVNLMSNYDV-PEKWAKFYTAEVVL----ALDAIHSMG-LIHRDVKP 170
Query: 185 YRILFDEDGNPRLSTFGL-MKNSRDGKSYSTNLAFTP----PEYLRT----GRVTPESVI 235
+L D+ G+ +L+ FG MK G TP PE L++ G E
Sbjct: 171 DNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDW 230
Query: 236 YSFGTLLLDLLSG 248
+S G L ++L G
Sbjct: 231 WSVGVFLFEMLVG 243
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 2e-04
Identities = 53/243 (21%), Positives = 105/243 (43%), Gaps = 19/243 (7%)
Query: 73 VYKGKLEN--QRRIAVKRFNRMAWPDPRQFLEEARSV-GQLRNNRLTNLLGCCCEGDERL 129
V+KG ++N Q+ +A+K + D + +++ +V Q + +T G +G +
Sbjct: 20 VFKG-IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLW 78
Query: 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 189
++ EY+ + L + A L+ +L + L+Y S+ + ++ D+ A +L
Sbjct: 79 IIMEYLGGGSALDLLRAGPFDEFQIATMLKEIL---KGLDYLHSE-KKIHRDIKAANVLL 134
Query: 190 DEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDL 245
E G+ +L+ FG+ D + TP PE ++ ++ I+S G ++L
Sbjct: 135 SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIEL 194
Query: 246 LSGKHIPPSHALDLIRDR-NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 304
G+ PP+ + +R + L G+F+ CL +P RP K
Sbjct: 195 AKGE--PPNSDMHPMRVLFLIPKNNPPTLTGEFSKP----FKEFIDACLNKDPSFRPTAK 248
Query: 305 SLV 307
L+
Sbjct: 249 ELL 251
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 2e-04
Identities = 38/171 (22%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 IAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 142
+A+K N P +F++EA + + + L LLG C + LV + MP+ L
Sbjct: 39 VAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLD 97
Query: 143 HLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 202
++ H + + L + +A+ + Y + R ++ DL A +L + +++ FGL
Sbjct: 98 YV-HEHKDNIGSQLLLNWCVQIAKGMMYLEER-RLVHRDLAARNVLVKSPNHVKITDFGL 155
Query: 203 MK-NSRDGKSYSTNLAFTPPEYL-----RTGRVTPESVIYSFGTLLLDLLS 247
+ D K Y+ + P +++ + T +S ++S+G + +L++
Sbjct: 156 ARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 206
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 3e-04
Identities = 60/245 (24%), Positives = 103/245 (42%), Gaps = 22/245 (8%)
Query: 72 VVYKG-KLENQRRIAVKRFNRMAWPDPRQFLE-EARSVGQLRNNRLTNLLGCCCEGDERL 129
VYK + +A+K + D + ++ E + + Q R+ +T G +G +
Sbjct: 16 EVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLW 75
Query: 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 189
++ EY + L + A LR VL LEY +G+ ++ D+ A IL
Sbjct: 76 IIMEYCGGGSCLDLLKPGKLDETYIAFILREVLL---GLEYLHEEGK-IHRDIKAANILL 131
Query: 190 DEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDL 245
E+G+ +L+ FG+ S TP PE ++ ++ I+S G ++L
Sbjct: 132 SEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIEL 191
Query: 246 LSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 301
G+ + P L LI N L + +F+ + V L CL +P+ERP
Sbjct: 192 AKGEPPLSDLHPMRVLFLIPKNNPPSLEGN----KFSKP-FKDFVSL---CLNKDPKERP 243
Query: 302 NPKSL 306
+ K L
Sbjct: 244 SAKEL 248
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 3e-04
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 28/120 (23%)
Query: 167 ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRT 226
ALEY SK +Y DL IL D++G+ +L+ FG K RD ++++ L T PEYL
Sbjct: 113 ALEYLHSKE-IVYRDLKPENILLDKEGHIKLTDFGFAKKLRD-RTWT--LCGT-PEYL-- 165
Query: 227 GRVTPESV----------IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 276
PE + ++ G L+ ++L G PP D N + + L G+
Sbjct: 166 ---APEVIQSKGHNKAVDWWALGILIYEMLVG--YPP------FFDDNPFGIYEKILAGK 214
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 3e-04
Identities = 54/237 (22%), Positives = 98/237 (41%), Gaps = 15/237 (6%)
Query: 68 KAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 127
+A +Y K ++RI ++ MA + +Q LE+ N+R L E +
Sbjct: 22 RATGKMYACKKLEKKRIKKRKGESMAL-NEKQILEKV-------NSRFVVSLAYAYETKD 73
Query: 128 RL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 186
L LV M L H++H + + + LE + R +Y DL
Sbjct: 74 ALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLED-LHQERIVYRDLKPEN 132
Query: 187 ILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLL 243
IL D+ G+ R+S GL + +G K + + PE ++ R T ++ G LL
Sbjct: 133 ILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLY 192
Query: 244 DLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
++++G+ P I+ ++ L E ++++ + L L +P+ER
Sbjct: 193 EMIAGQS-PFQQRKKKIKREEVERLVKEVQE-EYSEKFSPDARSLCKMLLCKDPKER 247
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 4e-04
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 10/147 (6%)
Query: 159 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSYSTNL 216
+V + + + L Y K + ++ D+ IL + G +L FG+ D S+
Sbjct: 107 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 166
Query: 217 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH-IPPSHALDLIRDRNLQMLTDSCLEG 275
++ PE L+ + +S I+S G L+++ G++ IPP A + L+++ +EG
Sbjct: 167 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDA------KELELMFGCPVEG 220
Query: 276 QFTDDDGTELVRLASRCL-QYEPRERP 301
+ + + R R L Y P RP
Sbjct: 221 DPAESETSPRPRPPGRPLSSYGPDSRP 247
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 4e-04
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
Query: 167 ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PE 222
L++ KG +Y DL +L D+DG+ +++ FG+ K + +G+ ++ TP PE
Sbjct: 108 GLQFLHKKG-IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPE 166
Query: 223 YLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALD 258
L+ G+ ESV +SFG LL ++L G+ P H D
Sbjct: 167 ILK-GQKYNESVDWWSFGVLLYEMLIGQ--SPFHGED 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 7e-04
Identities = 39/163 (23%), Positives = 75/163 (46%), Gaps = 24/163 (14%)
Query: 159 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL---MKNSRDGKSYSTN 215
R+ + + + L Y S + L+ D+ +L + G +L FG+ + NS K+Y
Sbjct: 99 RIAVAVVKGLTYLWSL-KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI-AKTYVGT 156
Query: 216 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK-----------HIPPSHALDLIRDRN 264
A+ PE + + S ++S G ++L G+ + P L I D +
Sbjct: 157 NAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED 216
Query: 265 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 307
+L GQF++ + V ++C++ +P+ERP P++L+
Sbjct: 217 PPVLPV----GQFSE----KFVHFITQCMRKQPKERPAPENLM 251
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 7e-04
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 164 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP--- 220
+A AL Y S +Y DL IL D G+ L+ FGL K + ++ TP
Sbjct: 105 IASALGYLHSL-NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYL 163
Query: 221 -PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD 258
PE LR + G +L ++L G +PP ++ D
Sbjct: 164 APEVLRKQPYDRTVDWWCLGAVLYEMLYG--LPPFYSRD 200
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 7e-04
Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 16/146 (10%)
Query: 115 LTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHLAQALEY 170
LT L C D V EY+ L + E H + +A + + L
Sbjct: 63 LTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLH---- 118
Query: 171 CTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-NSRDG---KSYSTNLAFTPPEYLRT 226
SKG +Y DL ++ D +G+ +++ FG+ K N DG K++ + PE +
Sbjct: 119 --SKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAY 175
Query: 227 GRVTPESVIYSFGTLLLDLLSGKHIP 252
++FG LL ++L+G P
Sbjct: 176 QPYGKSVDWWAFGVLLYEMLAG-QAP 200
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.001
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 13/149 (8%)
Query: 166 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSYSTNLAFTPPEY 223
+ L Y K + ++ D+ IL + G +L FG+ + K++ ++ PE
Sbjct: 111 KGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPER 170
Query: 224 LRTGRVTPESVIYSFGTLLLDLLSGK------HIPPSHALDLIRDRNLQMLTDSCLEGQF 277
++ + +S I+S G L++L +G+ + PP +L+ + G+F
Sbjct: 171 IQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELL-QYIVNEPPPRLPSGKF 229
Query: 278 TDDDGTELVRLASRCLQYEPRERPNPKSL 306
+ D + CL +PRERP+ K L
Sbjct: 230 SPD----FQDFVNLCLIKDPRERPSYKEL 254
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.001
Identities = 48/216 (22%), Positives = 91/216 (42%), Gaps = 15/216 (6%)
Query: 102 EEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVV 161
+E R + +L + + +LG CE L E+M +++ HL + K A+ +
Sbjct: 52 KEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVS-HLLS-KYGAFKEAVIINYT 109
Query: 162 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP-RLSTFGLM-----KNSRDGK---SY 212
L + L Y + ++ D+ +L D G R++ FG K + G+
Sbjct: 110 EQLLRGLSYLHEN-QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQL 168
Query: 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 272
+AF PE LR + ++S G +++++ + K PP +A L S
Sbjct: 169 LGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAK--PPWNAEKHSNHLALIFKIASA 226
Query: 273 LEGQFTDDDGTELVR-LASRCLQYEPRERPNPKSLV 307
+ + +R + RCL+ +P +RP + L+
Sbjct: 227 TTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELL 262
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.001
Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 17/132 (12%)
Query: 130 LVAEYMPNE---TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 186
LV EYM ++ L L H+ +K M+ L + L YC K L+ D+
Sbjct: 93 LVFEYMDHDLMGLLESGLVHFSEDHIKSFMK-----QLLEGLNYCHKKN-FLHRDIKCSN 146
Query: 187 ILFDEDGNPRLSTFGLMK--NSRDGKSYSTN----LAFTPPEYLR-TGRVTPESVIYSFG 239
IL + G +L+ FGL + NS + + Y TN L + PPE L R P ++S G
Sbjct: 147 ILLNNKGQIKLADFGLARLYNSEESRPY-TNKVITLWYRPPELLLGEERYGPAIDVWSCG 205
Query: 240 TLLLDLLSGKHI 251
+L +L + K I
Sbjct: 206 CILGELFTKKPI 217
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.001
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 166 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA------FT 219
+ L Y SKG L+ DL A +L D DG ++S FG+ K S D N++ +
Sbjct: 119 EGLAYLHSKG-ILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWM 177
Query: 220 PPEYLRTGR--VTPESVIYSFGTLLLDLLSGK 249
PE + + + + I+S G ++L++ +G+
Sbjct: 178 APEVIHSYSQGYSAKVDIWSLGCVVLEMFAGR 209
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 0.001
Identities = 44/211 (20%), Positives = 75/211 (35%), Gaps = 54/211 (25%)
Query: 126 DERL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQ---ALEYCTSKGRALYH- 180
+E L V EY PN L +++ + + K + A+ ALEY SKG + H
Sbjct: 74 EENLYFVLEYAPNGELLQYIRKYGSLDEKCT-----RFYAAEILLALEYLHSKG--IIHR 126
Query: 181 DLNAYRILFDEDGNPRLSTFG--------LMKNSRDGKSYSTNLA--------------- 217
DL IL D+D + +++ FG S G + + +
Sbjct: 127 DLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTA 186
Query: 218 -FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA------LDLIRDRNLQMLTD 270
+ PE L S +++ G ++ +L+GK PP I
Sbjct: 187 EYVSPELLNEKPAGKSSDLWALGCIIYQMLTGK--PPFRGSNEYLTFQKILKLEYSFP-- 242
Query: 271 SCLEGQFTDDDGTELVRLASRCLQYEPRERP 301
D +L+ + L +P++R
Sbjct: 243 -----PNFPPDAKDLIE---KLLVLDPQDRL 265
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.001
Identities = 60/250 (24%), Positives = 96/250 (38%), Gaps = 33/250 (13%)
Query: 73 VYKG-KLENQRRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCC---CEGD 126
VY L+ +AVK R DP+ E A + L + NL+ +
Sbjct: 16 VYTAVNLDTGELMAVKEIRIQD---NDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHRE 72
Query: 127 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 186
+ + EY TL + L H + L L + L Y S G ++ D+
Sbjct: 73 KVYIFMEYCSGGTLEELLEHGRILDEH--VIRVYTLQLLEGLAYLHSHG-IVHRDIKPAN 129
Query: 187 ILFDEDGNPRLSTFG----LMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPE--SV-I 235
I D +G +L FG L N+ +LA TP PE + G+ + I
Sbjct: 130 IFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADI 189
Query: 236 YSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL----VRLASR 291
+S G ++L++ +GK P LD Q++ + D +L R
Sbjct: 190 WSLGCVVLEMATGK--RPWSELD----NEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDR 243
Query: 292 CLQYEPRERP 301
CL+ +P++RP
Sbjct: 244 CLESDPKKRP 253
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.002
Identities = 40/161 (24%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 98 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETH--PMKWA 155
R FL EA +GQ + + +L G + +++ E+M N L L + ++
Sbjct: 50 RDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLV 109
Query: 156 MRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS---Y 212
LR +A ++Y S+ ++ DL A IL + + ++S FGL + D S Y
Sbjct: 110 GMLR---GIAAGMKY-LSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY 165
Query: 213 STNLA------FTPPEYLRTGRVTPESVIYSFGTLLLDLLS 247
+++L +T PE + + T S ++S+G ++ +++S
Sbjct: 166 TSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 206
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.002
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 159 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSYSTNL 216
+V + + + L Y K + ++ D+ IL + G +L FG+ D S+
Sbjct: 107 KVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 166
Query: 217 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH-IPPSHALDL 259
++ PE L+ + +S I+S G L++L G++ IPP A +L
Sbjct: 167 SYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKEL 210
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.003
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 25/156 (16%)
Query: 115 LTNLLGCCCEGDERL-LVAEYMPNETLAKHLFHWETHPMKWAMRL---RVVLHLAQ---A 167
LT L C + +RL V EY+ L +FH ++ + R R + A+
Sbjct: 58 LTQLH-SCFQTKDRLFFVMEYVNGGDL---MFH-----IQRSGRFDEPRARFYAAEIVLG 108
Query: 168 LEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTP----PE 222
L++ +G +Y DL +L D +G+ +++ FG+ K G + ST TP PE
Sbjct: 109 LQFLHERG-IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTST-FCGTPDYIAPE 166
Query: 223 YLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD 258
L P ++ G LL ++L+G+ P D
Sbjct: 167 ILSYQPYGPAVDWWALGVLLYEMLAGQ--SPFEGDD 200
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.003
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 14/160 (8%)
Query: 119 LGCCCEGDERL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA 177
L C + RL LV EY+ L H+ P + A R + AL + +G
Sbjct: 61 LHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHA-RFYAA-EICIALNFLHERG-I 117
Query: 178 LYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDGKSYSTNLA---FTPPEYLRTGRVTPES 233
+Y DL +L D DG+ +L+ +G+ K G + ST + PE LR
Sbjct: 118 IYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSV 177
Query: 234 VIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 273
++ G L+ ++++G+ D+I D N M T+ L
Sbjct: 178 DWWALGVLMFEMMAGR-----SPFDIITD-NPDMNTEDYL 211
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.003
Identities = 43/197 (21%), Positives = 81/197 (41%), Gaps = 16/197 (8%)
Query: 72 VVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130
+VY + L Q RIA+K + EE L++ + LG E +
Sbjct: 23 IVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82
Query: 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALE---YCTSKGRALYHDLNAYRI 187
E +P +L+ L + P+K ++ + Q LE Y + ++ D+ +
Sbjct: 83 FMEQVPGGSLSA-LLRSKWGPLK-DNEQTIIFYTKQILEGLKYLHDN-QIVHRDIKGDNV 139
Query: 188 LFDE-DGNPRLSTFGLMKN----SRDGKSYSTNLAFTPPEYLRTGR--VTPESVIYSFGT 240
L + G ++S FG K + ++++ L + PE + G + I+S G
Sbjct: 140 LVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGC 199
Query: 241 LLLDLLSGKHIPPSHAL 257
++++ +GK PP L
Sbjct: 200 TIVEMATGK--PPFIEL 214
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.003
Identities = 46/207 (22%), Positives = 79/207 (38%), Gaps = 11/207 (5%)
Query: 98 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 157
R L E R + +L + L NL + + LV + + L HL + ++
Sbjct: 45 RNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEE-QVK 103
Query: 158 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYST 214
+ + ALEY SKG ++ D+ IL DE G+ ++ F + S S
Sbjct: 104 FWIC-EIVLALEYLHSKG-IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTSG 161
Query: 215 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD-RNLQMLTDSCL 273
+ PE L + +S G + L GK H+ + R Q D
Sbjct: 162 TPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADV-- 219
Query: 274 EGQFTDDDGTELVRLASRCLQYEPRER 300
+ TE + ++ L+ +P++R
Sbjct: 220 --LYPATWSTEAIDAINKLLERDPQKR 244
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.003
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 160 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTNLAF 218
V + +AL + S + ++ DL A IL DG+ +L+ FG+ KN + T +
Sbjct: 108 VCRQMLEALNFLHSH-KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIG- 165
Query: 219 TP----PEYL--RTGRVTP---ESVIYSFGTLLLDLLSGKHIPPSHALDLIR 261
TP PE + T + P ++ I+S G L++L + PP H L+ +R
Sbjct: 166 TPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQME--PPHHELNPMR 215
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 39.1 bits (91), Expect = 0.004
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 23/165 (13%)
Query: 158 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 217
+R ++ +A +EY +SK ++ DL A + +E+ ++ FGL K G Y A
Sbjct: 116 VRFMIDIASGMEYLSSKN-FIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCA 174
Query: 218 FTPP------EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD------LIRDRNL 265
P E L T S +++FG + ++++ P + + LI+ L
Sbjct: 175 SKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRL 234
Query: 266 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 310
+ D CLE ++ L +C EP+ RP+ + L L
Sbjct: 235 KQPPD-CLE---------DVYELMCQCWSPEPKCRPSFQHLRDQL 269
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.004
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 12/147 (8%)
Query: 160 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 219
++ + AL+Y G ++ D+ A IL GN +L FG+ S + T
Sbjct: 106 IIREVLVALKYIHKVG-VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGT 164
Query: 220 P----PEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE 274
P PE + G+ I+S G + ++ +G PP +D R ML
Sbjct: 165 PYWMAPEVITEGKYYDTKADIWSLGITIYEMATGN--PPYSDVDAFR---AMMLIPKSKP 219
Query: 275 GQFTDDDGTELVR-LASRCLQYEPRER 300
+ D+ ++L+R + CL EP+ER
Sbjct: 220 PRLEDNGYSKLLREFVAACLDEEPKER 246
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 38.9 bits (90), Expect = 0.004
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 9/154 (5%)
Query: 101 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRV 160
L E+R + R+ LT+L D V EY+ L FH + R R
Sbjct: 43 LTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGEL---FFHLSRERVFSEDRTRF 99
Query: 161 V-LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKSYSTN 215
+ AL+Y S G+ +Y DL ++ D+DG+ +++ FGL K ++ K++
Sbjct: 100 YGAEIVSALDYLHS-GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGT 158
Query: 216 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 249
+ PE L + G ++ +++ G+
Sbjct: 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 192
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|223533 COG0457, NrfG, FOG: TPR repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 38.7 bits (88), Expect = 0.004
Identities = 22/136 (16%), Positives = 46/136 (33%)
Query: 353 EILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAG 412
L ++ ++ E + ++ + + G + ++A+E + +
Sbjct: 138 GALYELGDYEEALELYEKALELDPELNELAEALLALGALLEALGRYEEALELLEKALKLN 197
Query: 413 TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQV 472
L YL ++AL +A + P A Y A L +G EA
Sbjct: 198 PDDDAEALLNLGLLYLKLGKYEEALEYYEKALELDPDNAEALYNLALLLLELGRYEEALE 257
Query: 473 ALKEGTTLEAKKNSTA 488
AL++ L+ +
Sbjct: 258 ALEKALELDPDLYNLG 273
|
Length = 291 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 491 | |||
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 100.0 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 100.0 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 100.0 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 100.0 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 100.0 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 100.0 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 100.0 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 100.0 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 100.0 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 100.0 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.98 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.97 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.97 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.97 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.97 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.97 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.97 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.97 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.96 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.96 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.96 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.95 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.95 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.94 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.94 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.94 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.93 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.92 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.9 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.9 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.89 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.88 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.88 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.87 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.85 | |
| KOG0553 | 304 | consensus TPR repeat-containing protein [General f | 99.85 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.85 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.85 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.85 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.84 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.83 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.8 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.8 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.8 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.78 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.75 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.75 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.75 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.74 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.71 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.7 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.7 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.68 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.66 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.66 | |
| KOG4234 | 271 | consensus TPR repeat-containing protein [General f | 99.62 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.61 | |
| PRK15363 | 157 | pathogenicity island 2 chaperone protein SscA; Pro | 99.6 | |
| PLN03088 | 356 | SGT1, suppressor of G2 allele of SKP1; Provisional | 99.59 | |
| KOG0543 | 397 | consensus FKBP-type peptidyl-prolyl cis-trans isom | 99.57 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.57 | |
| KOG4648 | 536 | consensus Uncharacterized conserved protein, conta | 99.55 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.54 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.53 | |
| KOG1125 | 579 | consensus TPR repeat-containing protein [General f | 99.53 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.53 | |
| TIGR02552 | 135 | LcrH_SycD type III secretion low calcium response | 99.53 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.52 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.51 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.51 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.5 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.44 | |
| KOG0550 | 486 | consensus Molecular chaperone (DnaJ superfamily) [ | 99.43 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.43 | |
| KOG0551 | 390 | consensus Hsp90 co-chaperone CNS1 (contains TPR re | 99.41 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.41 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.4 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.39 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.39 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.37 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.35 | |
| KOG4642 | 284 | consensus Chaperone-dependent E3 ubiquitin protein | 99.34 | |
| KOG0624 | 504 | consensus dsRNA-activated protein kinase inhibitor | 99.34 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.33 | |
| PLN02789 | 320 | farnesyltranstransferase | 99.33 | |
| TIGR02795 | 119 | tol_pal_ybgF tol-pal system protein YbgF. Members | 99.33 | |
| KOG0376 | 476 | consensus Serine-threonine phosphatase 2A, catalyt | 99.32 | |
| KOG4555 | 175 | consensus TPR repeat-containing protein [Function | 99.32 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.32 | |
| cd00189 | 100 | TPR Tetratricopeptide repeat domain; typically con | 99.3 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.3 | |
| PRK02603 | 172 | photosystem I assembly protein Ycf3; Provisional | 99.29 | |
| PF12895 | 84 | Apc3: Anaphase-promoting complex, cyclosome, subun | 99.28 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.28 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.28 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.28 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 99.27 | |
| PRK09782 | 987 | bacteriophage N4 receptor, outer membrane subunit; | 99.27 | |
| KOG0545 | 329 | consensus Aryl-hydrocarbon receptor-interacting pr | 99.26 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.25 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.25 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.25 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.23 | |
| CHL00033 | 168 | ycf3 photosystem I assembly protein Ycf3 | 99.22 | |
| PRK15331 | 165 | chaperone protein SicA; Provisional | 99.2 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.19 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.19 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.16 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 99.16 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.15 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.15 | |
| TIGR03302 | 235 | OM_YfiO outer membrane assembly lipoprotein YfiO. | 99.14 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 99.14 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.13 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 99.13 | |
| COG5010 | 257 | TadD Flp pilus assembly protein TadD, contains TPR | 99.12 | |
| TIGR02521 | 234 | type_IV_pilW type IV pilus biogenesis/stability pr | 99.11 | |
| PLN02789 | 320 | farnesyltranstransferase | 99.11 |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-52 Score=404.66 Aligned_cols=273 Identities=36% Similarity=0.641 Sum_probs=234.3
Q ss_pred CccccCHHHHHHHhcCCccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEE
Q 011184 40 SFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL 119 (491)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~ 119 (491)
..+.|++.++..+|++|+..+++ |+|+||.||+|.+.+|..||||++.........+|.+|++++.+++|||+|+++
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~i---g~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~Ll 137 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLI---GEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLL 137 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcce---ecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEE
Confidence 57889999999999999999888 899999999999988899999998765543145699999999999999999999
Q ss_pred eEeecCC-eeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--CcccccccccceeeCCCCCeE
Q 011184 120 GCCCEGD-ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG--RALYHDLNAYRILFDEDGNPR 196 (491)
Q Consensus 120 ~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--~iiH~Dlkp~Nill~~~~~~k 196 (491)
|||.+.+ ..+||+||+++|+|.++|+.....+++|..+++|+.++|.||+|||+.. +||||||||+|||+|+++++|
T Consensus 138 GyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 138 GYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred EEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 9999998 5999999999999999998643228999999999999999999999865 499999999999999999999
Q ss_pred EccCCCcccCCC-CCcc----ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCch-----------hhHh
Q 011184 197 LSTFGLMKNSRD-GKSY----STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA-----------LDLI 260 (491)
Q Consensus 197 l~Dfgla~~~~~-~~~~----~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~-----------~~~~ 260 (491)
|+|||+|+.... .... .||.+|++||++..+..+.++|||||||+|+||+||+.+..... ...+
T Consensus 218 lsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~ 297 (361)
T KOG1187|consen 218 LSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL 297 (361)
T ss_pred ccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence 999999977654 3322 78999999999999999999999999999999999997654211 1233
Q ss_pred hhcccccccccccc-CCCCc-hhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 261 RDRNLQMLTDSCLE-GQFTD-DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 261 ~~~~~~~~~~~~~~-~~~~~-~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
.......+.|+.+. ..++. ..-..+..++.+|++.+|..||+|.++++.|+.+..
T Consensus 298 ~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 298 EEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred HCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 44466777777765 45553 456678999999999999999999999999965543
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-53 Score=387.20 Aligned_cols=249 Identities=19% Similarity=0.277 Sum_probs=209.3
Q ss_pred CccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCe-eEEEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE-RLLVA 132 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~-~~lv~ 132 (491)
.++.+.+++||+|..|+||++.++ +++.+|+|++...... ..+++.+|+++++..+||+||.++|+|..++. +.|+|
T Consensus 78 ~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~m 157 (364)
T KOG0581|consen 78 LSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICM 157 (364)
T ss_pred HHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeeh
Confidence 345677889999999999999964 5889999999544332 35689999999999999999999999999984 99999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccccceeeCCCCCeEEccCCCcccCCCC--
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 209 (491)
|||++|||++++.. .+.+++...-+|+.+|++||.|||+ .+ ||||||||+||||+..|.+||||||.++...+.
T Consensus 158 EYMDgGSLd~~~k~--~g~i~E~~L~~ia~~VL~GL~YLh~~~~-IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a 234 (364)
T KOG0581|consen 158 EYMDGGSLDDILKR--VGRIPEPVLGKIARAVLRGLSYLHEERK-IIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIA 234 (364)
T ss_pred hhcCCCCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhccC-eeeccCCHHHeeeccCCCEEeccccccHHhhhhhc
Confidence 99999999999863 4779999999999999999999996 55 999999999999999999999999998865443
Q ss_pred CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhc-cccccccccccCCCCch-hHHHHHH
Q 011184 210 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR-NLQMLTDSCLEGQFTDD-DGTELVR 287 (491)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~ 287 (491)
.++.||..|||||.+.+..|+.++||||||++++|+++|+.|++.........- .+..+.+. ..+.+|.. ++++++.
T Consensus 235 ~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~-ppP~lP~~~fS~ef~~ 313 (364)
T KOG0581|consen 235 NTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDE-PPPRLPEGEFSPEFRS 313 (364)
T ss_pred ccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcC-CCCCCCcccCCHHHHH
Confidence 577899999999999999999999999999999999999988766411000000 01112221 23345554 8899999
Q ss_pred HHHHhccCCCCCCCChhHHHH
Q 011184 288 LASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~ 308 (491)
|+..||++||.+|||+.++++
T Consensus 314 FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 314 FVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred HHHHHhcCCcccCCCHHHHhc
Confidence 999999999999999999997
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-50 Score=387.05 Aligned_cols=252 Identities=27% Similarity=0.419 Sum_probs=212.7
Q ss_pred cccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecCC-eeEEEEecCCCC
Q 011184 62 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGD-ERLLVAEYMPNE 138 (491)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~~-~~~lv~e~~~~g 138 (491)
...+|.|+||+||+|.+++...||||++....... .+.|.+|+.+|.+++|||||+++|+|..+. ..+|||||+++|
T Consensus 46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~G 125 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGG 125 (362)
T ss_pred hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCC
Confidence 34579999999999999655459999997654333 458999999999999999999999999987 799999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC-CeEEccCCCcccCCC----CCccc
Q 011184 139 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRD----GKSYS 213 (491)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~----~~~~~ 213 (491)
+|.+++.......+++..+++|+.||+.||.|||++++||||||||+|||++.++ ++||+|||+++.... .....
T Consensus 126 sL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~~ 205 (362)
T KOG0192|consen 126 SLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTSVA 205 (362)
T ss_pred cHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccccccCCC
Confidence 9999997644578999999999999999999999997689999999999999997 999999999976442 23367
Q ss_pred cCCCCCCccccc--CCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 214 TNLAFTPPEYLR--TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 214 ~t~~y~aPE~~~--~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
||+.|||||++. ...++.|+||||||+++|||+||+.||............. .......++..+++.+..++..
T Consensus 206 GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~----~~~~Rp~~p~~~~~~l~~l~~~ 281 (362)
T KOG0192|consen 206 GTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVV----VGGLRPPIPKECPPHLSSLMER 281 (362)
T ss_pred CCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHH----hcCCCCCCCccCCHHHHHHHHH
Confidence 899999999999 5689999999999999999999999887654322222221 1222334455577899999999
Q ss_pred hccCCCCCCCChhHHHHHhccccccC
Q 011184 292 CLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
||..||..||++.+|+..|+.+....
T Consensus 282 CW~~dp~~RP~f~ei~~~l~~~~~~~ 307 (362)
T KOG0192|consen 282 CWLVDPSRRPSFLEIVSRLESIMSHI 307 (362)
T ss_pred hCCCCCCcCCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999887654
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-50 Score=383.92 Aligned_cols=251 Identities=27% Similarity=0.430 Sum_probs=214.2
Q ss_pred ccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCC
Q 011184 59 ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 138 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~g 138 (491)
..++++||+|-||.||.|.+.+...||+|.++... ...+.|.+|+++|++|+|+|||+++++|..++.++||||||+.|
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~G 286 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKG 286 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccC
Confidence 35678999999999999999888899999998764 35678999999999999999999999999989999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCCcc-----c
Q 011184 139 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY-----S 213 (491)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~-----~ 213 (491)
+|.++|+......+...+.+.++.|||.||+||++++ +|||||-..||||+++..+||+|||||+...+..-. .
T Consensus 287 sLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~-~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~k 365 (468)
T KOG0197|consen 287 SLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN-YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGK 365 (468)
T ss_pred cHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC-ccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCC
Confidence 9999998756678999999999999999999999998 999999999999999999999999999965443221 1
Q ss_pred cCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 011184 214 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 292 (491)
Q Consensus 214 ~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 292 (491)
-.+.|+|||.+..+.++.+||||||||+||||+| |+.|+++........ .+........|..+|.++.++|..|
T Consensus 366 fPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~-----~le~GyRlp~P~~CP~~vY~lM~~C 440 (468)
T KOG0197|consen 366 FPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLE-----LLERGYRLPRPEGCPDEVYELMKSC 440 (468)
T ss_pred CCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHH-----HHhccCcCCCCCCCCHHHHHHHHHH
Confidence 2467999999999999999999999999999999 555555443322211 1222223345677889999999999
Q ss_pred ccCCCCCCCChhHHHHHhcccccc
Q 011184 293 LQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 293 l~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
|..+|++||||+.+...|+.+...
T Consensus 441 W~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 441 WHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred hhCCcccCCCHHHHHHHHHHhhhc
Confidence 999999999999999999888654
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-49 Score=366.39 Aligned_cols=247 Identities=19% Similarity=0.271 Sum_probs=205.4
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCC--CCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM--AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
..+|.+..+||+|+||+||+|++ .++..||||.+... .....+.+..|+.+|+.++|||||++++++..++.+||||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 45667778899999999999995 45899999999765 3334567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCC------CCeEEccCCCcccC
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED------GNPRLSTFGLMKNS 206 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~------~~~kl~Dfgla~~~ 206 (491)
|||.||+|.++++. .+.+++..+..++.||+.||++||+++ ||||||||.||||+.. -.+||+|||+|+..
T Consensus 89 EyC~gGDLs~yi~~--~~~l~e~t~r~Fm~QLA~alq~L~~~~-IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRR--RGRLPEATARHFMQQLASALQFLHENN-IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EeCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 99999999999984 457999999999999999999999998 9999999999999754 45899999999987
Q ss_pred CCC---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHH
Q 011184 207 RDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 283 (491)
Q Consensus 207 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (491)
.+. .+.+|++.|||||+++...|+.|+|+||+|++||++++|+.||.............. .......++...+.
T Consensus 166 ~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k---~~~~~~~~~~~~s~ 242 (429)
T KOG0595|consen 166 QPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKK---GNEIVPVLPAELSN 242 (429)
T ss_pred CchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc---cccccCchhhhccC
Confidence 764 467899999999999999999999999999999999999999976554443321111 11111223344455
Q ss_pred HHHHHHHHhccCCCCCCCChhHHHH
Q 011184 284 ELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 284 ~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.+.+++...++.+|.+|-++.+...
T Consensus 243 ~~~~Ll~~ll~~~~~~~~~~~~~~~ 267 (429)
T KOG0595|consen 243 PLRELLISLLQRNPKDRISFEDFFD 267 (429)
T ss_pred chhhhhhHHHhcCccccCchHHhhh
Confidence 6778888888889888887776654
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-50 Score=367.75 Aligned_cols=248 Identities=21% Similarity=0.266 Sum_probs=205.7
Q ss_pred CccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCCC-------hhHHHHHHHHHhccCCCCcceEEeEeecCCe
Q 011184 56 FAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD-------PRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 127 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~ 127 (491)
++.|-+.+.||+|+||.|-+|. ..+|+.||||++++..... .....+|+++|++|+|||||+++++|..++.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 4456777899999999999999 6679999999997533211 2235799999999999999999999999999
Q ss_pred eEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCC---CCeEEccCCCcc
Q 011184 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED---GNPRLSTFGLMK 204 (491)
Q Consensus 128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~---~~~kl~Dfgla~ 204 (491)
.||||||+.||.|.+++. .++.+.+....-++.|++.|+.|||+.| |+||||||+|||+..+ ..+||+|||+|+
T Consensus 251 ~YmVlE~v~GGeLfd~vv--~nk~l~ed~~K~~f~Qll~avkYLH~~G-I~HRDiKPeNILl~~~~e~~llKItDFGlAK 327 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVV--ANKYLREDLGKLLFKQLLTAVKYLHSQG-IIHRDIKPENILLSNDAEDCLLKITDFGLAK 327 (475)
T ss_pred eEEEEEEecCccHHHHHH--hccccccchhHHHHHHHHHHHHHHHHcC-cccccCCcceEEeccCCcceEEEecccchhh
Confidence 999999999999999997 4567888888999999999999999999 9999999999999755 779999999999
Q ss_pred cCCCC---CccccCCCCCCcccccCCCC---CCCccchhHHHHHHHHHhCCCCCCCchhhH-hhhccccccccccccCCC
Q 011184 205 NSRDG---KSYSTNLAFTPPEYLRTGRV---TPESVIYSFGTLLLDLLSGKHIPPSHALDL-IRDRNLQMLTDSCLEGQF 277 (491)
Q Consensus 205 ~~~~~---~~~~~t~~y~aPE~~~~~~~---~~~~Dv~slG~vl~elltg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 277 (491)
..... .+.+||+.|.|||++.+..+ ..+.|+||+|||||-+++|.+||..+..+. ..+....... ...+..
T Consensus 328 ~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y--~f~p~~ 405 (475)
T KOG0615|consen 328 VSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRY--AFGPLQ 405 (475)
T ss_pred ccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcc--cccChh
Confidence 87654 47799999999999987653 347899999999999999999997654332 2211111110 112234
Q ss_pred CchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 278 TDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 278 ~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
+...+.+..+||.+||..||++|||+.|+|.
T Consensus 406 w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 406 WDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred hhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 5578899999999999999999999999998
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-49 Score=378.89 Aligned_cols=243 Identities=18% Similarity=0.224 Sum_probs=212.8
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
..|.....||+|+|+.||.++. .+|..||+|++.+.. ....+...+|+++.+.|+|||||+++++|++.+++|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4567777889999999999995 889999999996532 234567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---- 208 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---- 208 (491)
|+|+.++|..++. ..+++++.+++.+++||+.||.|||+.+ |||||||..|++++++.++||+|||||.....
T Consensus 98 ELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~~-IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Er 174 (592)
T KOG0575|consen 98 ELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSLG-IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGER 174 (592)
T ss_pred EecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhcC-ceecccchhheeecCcCcEEecccceeeeecCcccc
Confidence 9999999999886 4678999999999999999999999999 99999999999999999999999999987653
Q ss_pred CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHH
Q 011184 209 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 288 (491)
Q Consensus 209 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (491)
..+.+|||.|.|||++....++..+||||+|||+|-||.|++||.............. ..-.+|..++.++.+|
T Consensus 175 k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~------~~Y~~P~~ls~~A~dL 248 (592)
T KOG0575|consen 175 KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKL------NEYSMPSHLSAEAKDL 248 (592)
T ss_pred cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHh------cCcccccccCHHHHHH
Confidence 3577999999999999999999999999999999999999999977644433222111 1223466778899999
Q ss_pred HHHhccCCCCCCCChhHHHH
Q 011184 289 ASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~ 308 (491)
|.++|+.||.+|||+++|+.
T Consensus 249 I~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 249 IRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred HHHHhcCCcccCCCHHHHhc
Confidence 99999999999999999997
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-50 Score=353.10 Aligned_cols=248 Identities=20% Similarity=0.275 Sum_probs=208.5
Q ss_pred cccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEe-EeecCCe-eEEEE
Q 011184 58 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLG-CCCEGDE-RLLVA 132 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~-~~~~~~~-~~lv~ 132 (491)
+++++++||+|+||.||++. +.+|..||.|.++-+.... .+....|+.+|++|+|||||++++ .|.+++. ++|||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 46777889999999999999 7789999999997443322 456889999999999999999999 5655555 89999
Q ss_pred ecCCCCCHHHHhcccC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcccccccccceeeCCCCCeEEccCCCcccCC
Q 011184 133 EYMPNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSK---GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 207 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 207 (491)
|||.+|+|...+.+.+ .+.+++..+|+++.|+|.||..+|++ +.|+||||||.||+|+.+|.+||+|||+++.+.
T Consensus 100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~ 179 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS 179 (375)
T ss_pred HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhc
Confidence 9999999999997643 45799999999999999999999982 349999999999999999999999999999876
Q ss_pred CCC----ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCC-chhH
Q 011184 208 DGK----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT-DDDG 282 (491)
Q Consensus 208 ~~~----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 282 (491)
... +++|||.||+||.+.+.+|+++|||||+||++|||..-++||.+........++-+.-. ..+| .-.+
T Consensus 180 s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~-----~~~p~~~YS 254 (375)
T KOG0591|consen 180 SKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDY-----PPLPDEHYS 254 (375)
T ss_pred chhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCC-----CCCcHHHhh
Confidence 653 56899999999999999999999999999999999999999998866555444333311 1233 4567
Q ss_pred HHHHHHHHHhccCCCCCCCChhHHHHHh
Q 011184 283 TELVRLASRCLQYEPRERPNPKSLVTAL 310 (491)
Q Consensus 283 ~~~~~li~~cl~~dp~~Rps~~~il~~L 310 (491)
.++..||..|+..||..||+.-.++..+
T Consensus 255 ~~l~~li~~ci~vd~~~RP~t~~~v~di 282 (375)
T KOG0591|consen 255 TDLRELINMCIAVDPEQRPDTVPYVQDI 282 (375)
T ss_pred hHHHHHHHHHccCCcccCCCcchHHHHH
Confidence 8999999999999999999854444433
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-48 Score=351.88 Aligned_cols=237 Identities=22% Similarity=0.279 Sum_probs=206.0
Q ss_pred ccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCC---CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
.+.++++.||+|+||.||.++ .++++.+|+|++++... ...+....|..+|..++||+||.++..|++.+..|||+
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVl 104 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVL 104 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEE
Confidence 445677888999999999999 55699999999976432 34567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---- 208 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---- 208 (491)
||+.||.|..+|. ..+.+++..+.-++.+|+.||.|||+++ ||||||||+|||+|.+|.++|+|||+++....
T Consensus 105 d~~~GGeLf~hL~--~eg~F~E~~arfYlaEi~lAL~~LH~~g-IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~ 181 (357)
T KOG0598|consen 105 DYLNGGELFYHLQ--REGRFSEDRARFYLAEIVLALGYLHSKG-IIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDA 181 (357)
T ss_pred eccCCccHHHHHH--hcCCcchhHHHHHHHHHHHHHHHHHhCC-eeeccCCHHHeeecCCCcEEEeccccchhcccCCCc
Confidence 9999999999997 3578999999999999999999999999 99999999999999999999999999985432
Q ss_pred CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHH
Q 011184 209 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 288 (491)
Q Consensus 209 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (491)
..+++||+.|||||++.+..++..+|.||+|+++|||++|.+||.......+.+...... ....+.-++.+.+++
T Consensus 182 t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k-----~~~~p~~ls~~ardl 256 (357)
T KOG0598|consen 182 TRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK-----LPLPPGYLSEEARDL 256 (357)
T ss_pred cccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc-----CCCCCccCCHHHHHH
Confidence 346789999999999999999999999999999999999999998876655554444432 112233467899999
Q ss_pred HHHhccCCCCCCC
Q 011184 289 ASRCLQYEPRERP 301 (491)
Q Consensus 289 i~~cl~~dp~~Rp 301 (491)
+.++|..||.+|.
T Consensus 257 l~~LL~rdp~~RL 269 (357)
T KOG0598|consen 257 LKKLLKRDPRQRL 269 (357)
T ss_pred HHHHhccCHHHhc
Confidence 9999999999995
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-47 Score=338.56 Aligned_cols=248 Identities=21% Similarity=0.303 Sum_probs=199.8
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
.|+.++++|+|++|+||+++. ++|+.||||++....... .+-.++|+++|++|+|+|+|.++++|......+||+||
T Consensus 3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~ 82 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY 82 (396)
T ss_pred HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence 477889999999999999994 569999999997654321 35688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC-CC---C
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR-DG---K 210 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~-~~---~ 210 (491)
|+..-|. -|.+ ....++...+.+++.|++.|+.|+|+++ +|||||||+||||+.+|.+||||||+|+... ++ +
T Consensus 83 ~dhTvL~-eLe~-~p~G~~~~~vk~~l~Q~l~ai~~cHk~n-~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YT 159 (396)
T KOG0593|consen 83 CDHTVLH-ELER-YPNGVPSELVKKYLYQLLKAIHFCHKNN-CIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYT 159 (396)
T ss_pred cchHHHH-HHHh-ccCCCCHHHHHHHHHHHHHHhhhhhhcC-eecccCChhheEEecCCcEEeccchhhHhhcCCcchhh
Confidence 9855554 4433 3456889999999999999999999999 9999999999999999999999999999765 33 3
Q ss_pred ccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhh--------------------hccccccc
Q 011184 211 SYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR--------------------DRNLQMLT 269 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~--------------------~~~~~~~~ 269 (491)
.++.|.-|.|||.+.+ ..|+...|||++||++.||++|.+.+|+...-... ...+..+.
T Consensus 160 DYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~ 239 (396)
T KOG0593|consen 160 DYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVR 239 (396)
T ss_pred hhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeee
Confidence 4567899999999988 56999999999999999999999888875321100 01111111
Q ss_pred ccccc-----CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 270 DSCLE-----GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 270 ~~~~~-----~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
-+.+. ..-.+..+.-+.+|+..||+.||.+|++.++++.
T Consensus 240 lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 240 LPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred cCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 11110 1111235568899999999999999999999985
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-46 Score=324.37 Aligned_cols=258 Identities=22% Similarity=0.295 Sum_probs=209.7
Q ss_pred cccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 58 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
.|..++.+|+|.||+||+|+ ..+|+.||||+++.....+ .....+|+..|+.++|+||+.++++|...+.+.||+||
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf 82 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF 82 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence 46677888999999999999 6789999999998765433 45688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC----
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 210 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 210 (491)
++ .+|+..+++ +...++...+..++.++++||+|||++. |+||||||+|+||+.+|.+||+|||+|+.+....
T Consensus 83 m~-tdLe~vIkd-~~i~l~pa~iK~y~~m~LkGl~y~H~~~-IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~ 159 (318)
T KOG0659|consen 83 MP-TDLEVVIKD-KNIILSPADIKSYMLMTLKGLAYCHSKW-ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQT 159 (318)
T ss_pred cc-ccHHHHhcc-cccccCHHHHHHHHHHHHHHHHHHHhhh-hhcccCCccceEEcCCCcEEeecccchhccCCCCcccc
Confidence 98 899998876 5578999999999999999999999999 9999999999999999999999999999876432
Q ss_pred ccccCCCCCCcccccCCC-CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccccccc-------------------
Q 011184 211 SYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD------------------- 270 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~------------------- 270 (491)
..+.|.-|.|||.+.|.. |+...|+||.|||+.||+.|.+.+++...-......+..+..
T Consensus 160 ~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~ 239 (318)
T KOG0659|consen 160 HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQ 239 (318)
T ss_pred cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHh
Confidence 225678899999998865 999999999999999999999877775322111111111111
Q ss_pred ---ccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccCCCC
Q 011184 271 ---SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVP 320 (491)
Q Consensus 271 ---~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~~ 320 (491)
......+....+.++.+|+.++|..||.+|+++.++++ ..+....+.|
T Consensus 240 ~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~--~~yf~~~P~p 290 (318)
T KOG0659|consen 240 QFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALK--HPYFKSLPLP 290 (318)
T ss_pred cCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhc--chhhhcCCCC
Confidence 11111133345677899999999999999999999998 4555544333
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-47 Score=351.99 Aligned_cols=247 Identities=21% Similarity=0.336 Sum_probs=200.9
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCC--eeEEEEecC
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD--ERLLVAEYM 135 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~--~~~lv~e~~ 135 (491)
....+.||+|+||+||++.. ++|...|||.+........+.+.+|+.+|++++|||||+++|...... .+++.|||+
T Consensus 19 ~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~ 98 (313)
T KOG0198|consen 19 WSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYA 98 (313)
T ss_pred hhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeecc
Confidence 34456779999999999995 458999999987653233567899999999999999999999854444 689999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC-CCCeEEccCCCcccCCC------
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRD------ 208 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla~~~~~------ 208 (491)
++|+|.+++..... .+++..+..++.||+.||.|||++| +|||||||+|||++. ++.+||+|||+++....
T Consensus 99 ~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g-~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~ 176 (313)
T KOG0198|consen 99 PGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKG-IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSD 176 (313)
T ss_pred CCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCC-EeccCcccceEEEeCCCCeEEeccCcccccccccccccc
Confidence 99999999986444 7999999999999999999999999 999999999999999 79999999999876542
Q ss_pred -CCccccCCCCCCcccccCCC-CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHH
Q 011184 209 -GKSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 209 -~~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
.....||+.|||||++..+. ...++|||||||+++||+||++|+... .. ............ ..+.+|..++.+..
T Consensus 177 ~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~~-~~~~~~~ig~~~-~~P~ip~~ls~~a~ 253 (313)
T KOG0198|consen 177 SELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-FE-EAEALLLIGRED-SLPEIPDSLSDEAK 253 (313)
T ss_pred ccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-cc-hHHHHHHHhccC-CCCCCCcccCHHHH
Confidence 23567999999999999643 445999999999999999998776542 00 000001111111 22366777889999
Q ss_pred HHHHHhccCCCCCCCChhHHHHHh
Q 011184 287 RLASRCLQYEPRERPNPKSLVTAL 310 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~L 310 (491)
+|+.+|+..||..|||+.++|...
T Consensus 254 ~Fl~~C~~~~p~~Rpta~eLL~hp 277 (313)
T KOG0198|consen 254 DFLRKCFKRDPEKRPTAEELLEHP 277 (313)
T ss_pred HHHHHHhhcCcccCcCHHHHhhCh
Confidence 999999999999999999999854
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-45 Score=342.12 Aligned_cols=253 Identities=19% Similarity=0.257 Sum_probs=207.1
Q ss_pred CCccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCCC-hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 55 GFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
+-..|++..+||.|..++||+|+ ...+..||||++....... .+.+.+|+..++.++||||++++..|..+..+|+||
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm 103 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM 103 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence 34568888899999999999999 6678999999998655444 578999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccC-CCC--
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDG-- 209 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~-~~~-- 209 (491)
.||.+||+.+.+...-...+.+..+..|++++++||.|||.+| .||||||+.||||+.+|.+||+|||.+... ..+
T Consensus 104 pfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G-~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R 182 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG-HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDR 182 (516)
T ss_pred hhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC-ceecccccccEEEcCCCcEEEcCceeeeeecccCce
Confidence 9999999999998655667999999999999999999999999 999999999999999999999999975432 111
Q ss_pred -----CccccCCCCCCcccccC--CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccccc----ccccccCCCC
Q 011184 210 -----KSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML----TDSCLEGQFT 278 (491)
Q Consensus 210 -----~~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 278 (491)
..+.||+.|||||++.. ..|+.|+||||||++..||++|..||..-....+.-..++.- ........-.
T Consensus 183 ~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~ 262 (516)
T KOG0582|consen 183 QVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDED 262 (516)
T ss_pred eeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHh
Confidence 45678999999999654 359999999999999999999999875432211111111111 1111112222
Q ss_pred chhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 279 DDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 279 ~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
...+..+..++..||++||.+|||++++++
T Consensus 263 k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 263 KKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred hhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 345678999999999999999999999986
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-45 Score=347.80 Aligned_cols=239 Identities=20% Similarity=0.329 Sum_probs=206.7
Q ss_pred cccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCCHH
Q 011184 62 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLA 141 (491)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 141 (491)
+.=||.|+.|-||+|+++ ++.||||+++... ..+++-|++|+||||+.|.|+|.....+|||||||+.|-|.
T Consensus 129 LeWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~ 200 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLY 200 (904)
T ss_pred hhhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHH
Confidence 456799999999999985 5789999985322 36788899999999999999999999999999999999999
Q ss_pred HHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC---CccccCCCC
Q 011184 142 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAF 218 (491)
Q Consensus 142 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~~t~~y 218 (491)
..|+ ...+++......|..+|+.||.|||.+. |||||||.-||||+.+..+||+|||-++...+. ..+.||..|
T Consensus 201 ~VLk--a~~~itp~llv~Wsk~IA~GM~YLH~hK-IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaW 277 (904)
T KOG4721|consen 201 EVLK--AGRPITPSLLVDWSKGIAGGMNYLHLHK-IIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAW 277 (904)
T ss_pred HHHh--ccCccCHHHHHHHHHHhhhhhHHHHHhh-HhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhh
Confidence 9997 4577899999999999999999999997 999999999999999999999999988765433 467899999
Q ss_pred CCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCCCC
Q 011184 219 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 298 (491)
Q Consensus 219 ~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~ 298 (491)
||||+++..+++.|.|||||||||||||||.-|+-.-. ...++..+....+....|..++..+.-|+.+||+..|.
T Consensus 278 MAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVd----ssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpR 353 (904)
T KOG4721|consen 278 MAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVD----SSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPR 353 (904)
T ss_pred hCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccc----hheeEEeccCCcccccCcccCchHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999998764322 12334445555555566778889999999999999999
Q ss_pred CCCChhHHHHHhccccc
Q 011184 299 ERPNPKSLVTALSPLQK 315 (491)
Q Consensus 299 ~Rps~~~il~~L~~~~~ 315 (491)
.||+|++|+..|+-...
T Consensus 354 NRPSFrqil~HldIa~p 370 (904)
T KOG4721|consen 354 NRPSFRQILLHLDIASP 370 (904)
T ss_pred CCccHHHHHHHHhhcCH
Confidence 99999999999876543
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-46 Score=351.35 Aligned_cols=249 Identities=18% Similarity=0.266 Sum_probs=206.8
Q ss_pred ccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCCC-hhHHHHHHHHHhccC-CCCcceEEeEeecCC-eeEEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLR-NNRLTNLLGCCCEGD-ERLLVA 132 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~-~~~lv~ 132 (491)
..|.+++++|.|+||.||+|+ ..+|..||||++++....- .-.-+||+..|++|. ||||+++.+++.+.+ .+++||
T Consensus 10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVf 89 (538)
T KOG0661|consen 10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVF 89 (538)
T ss_pred HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeH
Confidence 468899999999999999999 6779999999998654332 224578999999998 999999999999887 899999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC---
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 209 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 209 (491)
|||+ .+|++++.++ +..+++..++.|+.||+.||+|+|.+| +.|||+||+|||+.....+||+|||+|+.....
T Consensus 90 E~Md-~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~G-fFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPY 166 (538)
T KOG0661|consen 90 EFMD-CNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHG-FFHRDLKPENILISGNDVIKIADFGLAREVRSKPPY 166 (538)
T ss_pred Hhhh-hhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcC-cccccCChhheEecccceeEecccccccccccCCCc
Confidence 9997 8999999875 789999999999999999999999999 999999999999999999999999999976543
Q ss_pred CccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcc------------------------
Q 011184 210 KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN------------------------ 264 (491)
Q Consensus 210 ~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~------------------------ 264 (491)
+.++.|.-|+|||++.. +.|+.+.|+|++|||++|+.+-++.|++...-..-.++
T Consensus 167 TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf 246 (538)
T KOG0661|consen 167 TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNF 246 (538)
T ss_pred chhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhcc
Confidence 56678999999998765 55999999999999999999999999875321100000
Q ss_pred -ccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 265 -LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 265 -~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
+.......+ ..+.+..+.++.++|.+||++||.+|||+.++++.
T Consensus 247 ~~P~~~~~~l-~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 247 RFPQVKPSPL-KDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred CCCcCCCCCh-HHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 000111111 12223477899999999999999999999999984
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-46 Score=355.34 Aligned_cols=244 Identities=20% Similarity=0.318 Sum_probs=210.6
Q ss_pred cccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 58 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
.|....++|+|+.|.||.+. ..+++.||||++........+-+.+|+.+|+..+|+|||.+++.|...+.+|.||||++
T Consensus 274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ 353 (550)
T KOG0578|consen 274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYME 353 (550)
T ss_pred hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecC
Confidence 45555688999999999999 66789999999987665566778999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----CCcc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSY 212 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~ 212 (491)
||+|.+.+. ...+++.++..|+++++.||+|||.++ |+|||||.+|||++.+|.+||+|||++..... ..+.
T Consensus 354 ggsLTDvVt---~~~~~E~qIA~Icre~l~aL~fLH~~g-IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~Tm 429 (550)
T KOG0578|consen 354 GGSLTDVVT---KTRMTEGQIAAICREILQGLKFLHARG-IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTM 429 (550)
T ss_pred CCchhhhhh---cccccHHHHHHHHHHHHHHHHHHHhcc-eeeeccccceeEeccCCcEEEeeeeeeeccccccCccccc
Confidence 999999984 456999999999999999999999999 99999999999999999999999999876543 3567
Q ss_pred ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 011184 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 292 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 292 (491)
.||+.|||||+.....|+++.||||||++++||+-|.+||..+..-. ..........+....+..+++.+.+|+.+|
T Consensus 430 VGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Plr---AlyLIa~ng~P~lk~~~klS~~~kdFL~~c 506 (550)
T KOG0578|consen 430 VGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR---ALYLIATNGTPKLKNPEKLSPELKDFLDRC 506 (550)
T ss_pred cCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHH---HHHHHhhcCCCCcCCccccCHHHHHHHHHH
Confidence 89999999999999999999999999999999999999886432111 111111222333455677889999999999
Q ss_pred ccCCCCCCCChhHHHH
Q 011184 293 LQYEPRERPNPKSLVT 308 (491)
Q Consensus 293 l~~dp~~Rps~~~il~ 308 (491)
|..|+.+|+++.|+|+
T Consensus 507 L~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 507 LVVDVEQRASAKELLE 522 (550)
T ss_pred hhcchhcCCCHHHHhc
Confidence 9999999999999998
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-45 Score=325.42 Aligned_cols=235 Identities=18% Similarity=0.219 Sum_probs=207.2
Q ss_pred ccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCC---CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
++++++..+|.|+||.|.+++ ..+|..+|+|++..... ...+...+|..+|+.+.||+++++++.|.+.+..+|||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 346777888999999999999 45689999999975432 23456789999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-Cc
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KS 211 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~ 211 (491)
||++||.|.++++ +.+++++...+.++.||+.||+|||+.+ |++|||||+|||+|.+|.+||+|||+|+..... -+
T Consensus 124 eyv~GGElFS~Lr--k~~rF~e~~arFYAAeivlAleylH~~~-iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~T 200 (355)
T KOG0616|consen 124 EYVPGGELFSYLR--KSGRFSEPHARFYAAEIVLALEYLHSLD-IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWT 200 (355)
T ss_pred eccCCccHHHHHH--hcCCCCchhHHHHHHHHHHHHHHHHhcC-eeeccCChHHeeeccCCcEEEEeccceEEecCcEEE
Confidence 9999999999997 4578999999999999999999999999 999999999999999999999999999987654 46
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
.+||+.|+|||.++...++.++|.|||||++|||+.|.+||.......+.+++.... -.+|.-.+.++.+|+.+
T Consensus 201 lCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~------v~fP~~fs~~~kdLl~~ 274 (355)
T KOG0616|consen 201 LCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGK------VKFPSYFSSDAKDLLKK 274 (355)
T ss_pred ecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCc------ccCCcccCHHHHHHHHH
Confidence 789999999999999999999999999999999999999998776554444443332 24677788899999999
Q ss_pred hccCCCCCC
Q 011184 292 CLQYEPRER 300 (491)
Q Consensus 292 cl~~dp~~R 300 (491)
+|+.|-.+|
T Consensus 275 LL~vD~t~R 283 (355)
T KOG0616|consen 275 LLQVDLTKR 283 (355)
T ss_pred HHhhhhHhh
Confidence 999999999
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-44 Score=348.24 Aligned_cols=246 Identities=17% Similarity=0.247 Sum_probs=216.1
Q ss_pred CCccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEE
Q 011184 55 GFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
....+++...||.|+.|.|-+|+ ..+|+.+|||++.+.. ......+.+|+-+|+.+.||||++++++|.+..++|+
T Consensus 10 tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lyl 89 (786)
T KOG0588|consen 10 TIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYL 89 (786)
T ss_pred cccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEE
Confidence 34567888899999999999999 5679999999996542 2235568899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 209 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 209 (491)
|.||++||.|.+++. ..+++++.+..+++.||+.|+.|+|..+ |+||||||+|+|+|..+++||+|||+|.....+
T Consensus 90 vlEyv~gGELFdylv--~kG~l~e~eaa~ff~QIi~gv~yCH~~~-icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk 166 (786)
T KOG0588|consen 90 VLEYVPGGELFDYLV--RKGPLPEREAAHFFRQILDGVSYCHAFN-ICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK 166 (786)
T ss_pred EEEecCCchhHHHHH--hhCCCCCHHHHHHHHHHHHHHHHHhhhc-ceeccCCchhhhhhcccCEeeeccceeecccCCc
Confidence 999999999999997 4678999999999999999999999998 999999999999999999999999999876655
Q ss_pred --CccccCCCCCCcccccCCCC-CCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHH
Q 011184 210 --KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 210 --~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
.+.+|++.|.+||++.|.+| +.++||||.|||||.||||+.||..+....+..+...+. .+.|..++.+++
T Consensus 167 lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~------f~MPs~Is~eaQ 240 (786)
T KOG0588|consen 167 LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGV------FEMPSNISSEAQ 240 (786)
T ss_pred cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCc------ccCCCcCCHHHH
Confidence 46789999999999999887 569999999999999999999998776655443333322 245678889999
Q ss_pred HHHHHhccCCCCCCCChhHHHHH
Q 011184 287 RLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~ 309 (491)
+|+.+||..||.+|.|.++|+++
T Consensus 241 dLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 241 DLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred HHHHHHhccCccccccHHHHhhC
Confidence 99999999999999999999984
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-45 Score=347.91 Aligned_cols=243 Identities=20% Similarity=0.270 Sum_probs=209.7
Q ss_pred cccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCC---CCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEE
Q 011184 58 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~ 132 (491)
++...+.||.|+|++|++|+ ..+++.||||++.+.. ....+...+|-++|.+| .||.|++|+..|.++..+|+|+
T Consensus 74 DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvL 153 (604)
T KOG0592|consen 74 DFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVL 153 (604)
T ss_pred hcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEE
Confidence 34555667999999999999 6679999999996432 11234577899999999 8999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---- 208 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---- 208 (491)
||+++|+|.++|.+ -+.+++...+.++.+|+.||+|||+.| ||||||||+|||+|++|+++|+|||-|+....
T Consensus 154 e~A~nGdll~~i~K--~Gsfde~caR~YAAeIldAleylH~~G-IIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~ 230 (604)
T KOG0592|consen 154 EYAPNGDLLDLIKK--YGSFDETCARFYAAEILDALEYLHSNG-IIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKS 230 (604)
T ss_pred EecCCCcHHHHHHH--hCcchHHHHHHHHHHHHHHHHHHHhcC-ceeccCChhheeEcCCCcEEEeeccccccCChhhcc
Confidence 99999999999985 467999999999999999999999999 99999999999999999999999999875432
Q ss_pred -----------C--CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccC
Q 011184 209 -----------G--KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 275 (491)
Q Consensus 209 -----------~--~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (491)
. .+++||-.|.+||++..+..++.+|+|+||||||+|+.|.+||.+.....+-+.++.. .-
T Consensus 231 ~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l------~y 304 (604)
T KOG0592|consen 231 QENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQAL------DY 304 (604)
T ss_pred ccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHh------cc
Confidence 1 3478999999999999999999999999999999999999999877655544443332 33
Q ss_pred CCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 276 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 276 ~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
.++...++.+.+|+.++|..||.+|+|.++|.++
T Consensus 305 ~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 305 EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred cCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 5677778999999999999999999999999874
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-45 Score=343.42 Aligned_cols=249 Identities=22% Similarity=0.279 Sum_probs=201.9
Q ss_pred ccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCC--CCChhHHHHHHHHHhccCCCCcceEEeEeecC--CeeEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLLV 131 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--~~~~lv 131 (491)
+.++.+++||+|+||.||+|+ ..+|+.||+|++.... .....-..+||.||++|.||||+++.+..... ..+|||
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 356788899999999999999 7789999999997654 33456678999999999999999999998876 689999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC--
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 209 (491)
+|||+ -+|..++.. ..-.+++.++..++.|++.||+|+|++| |+|||||.+|||||.+|.+||+|||||+.....
T Consensus 197 FeYMd-hDL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~g-vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~ 273 (560)
T KOG0600|consen 197 FEYMD-HDLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSRG-VLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGS 273 (560)
T ss_pred Eeccc-chhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhcC-eeeccccccceEEcCCCCEEeccccceeeccCCCC
Confidence 99998 788888853 3447999999999999999999999999 999999999999999999999999999965433
Q ss_pred ---CccccCCCCCCcccccCCC-CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccc-------------cccc--
Q 011184 210 ---KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-------------MLTD-- 270 (491)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~-------------~~~~-- 270 (491)
+..+.|.-|.|||++.|.. |+.+.|+||.||||.||++|++++++...-.....++. .++.
T Consensus 274 ~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~ 353 (560)
T KOG0600|consen 274 APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHAT 353 (560)
T ss_pred cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCccc
Confidence 2345688999999999865 99999999999999999999988876432111111100 0000
Q ss_pred -ccccCC-------CCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 271 -SCLEGQ-------FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 271 -~~~~~~-------~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
...... ....++....+|+..+|..||.+|.|+.++|.
T Consensus 354 ~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 354 IFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred ccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 000000 12235678899999999999999999999987
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-44 Score=348.74 Aligned_cols=249 Identities=21% Similarity=0.254 Sum_probs=210.1
Q ss_pred CccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCC----CC-CChhHHHHHHHHHhccC-CCCcceEEeEeecCCee
Q 011184 56 FAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRM----AW-PDPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDER 128 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~ 128 (491)
...+.+...||+|+||+|+.|. ..++..||||++.+. .. ...+.+.+|+.++++++ ||||++++.++.....+
T Consensus 16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~ 95 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKI 95 (370)
T ss_pred cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeE
Confidence 4567888899999999999998 556899999987653 11 23456778999999998 99999999999999999
Q ss_pred EEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCC-CCeEEccCCCcccCC
Q 011184 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSR 207 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~ 207 (491)
++||||+.||+|.+++.. .+++.+.....++.|++.|++|||++| |+||||||+|||++.+ +++||+|||++....
T Consensus 96 ~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~g-i~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 96 YIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRG-IVHRDLKPENILLDGNEGNLKLSDFGLSAISP 172 (370)
T ss_pred EEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCC-EeeCCCCHHHEEecCCCCCEEEeccccccccC
Confidence 999999999999999974 578999999999999999999999999 9999999999999999 999999999998762
Q ss_pred ----CCCccccCCCCCCcccccCCC-CC-CCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchh
Q 011184 208 ----DGKSYSTNLAFTPPEYLRTGR-VT-PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 281 (491)
Q Consensus 208 ----~~~~~~~t~~y~aPE~~~~~~-~~-~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (491)
...+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|..||............... .-.+|..+
T Consensus 173 ~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~------~~~~p~~~ 246 (370)
T KOG0583|consen 173 GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKG------EFKIPSYL 246 (370)
T ss_pred CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcC------CccCCCCc
Confidence 235678999999999999877 75 6999999999999999999999875443333321111 12344455
Q ss_pred -HHHHHHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 282 -GTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 282 -~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
++++..|+.+||..||.+|+|+.+|+. ..+..
T Consensus 247 ~S~~~~~Li~~mL~~~P~~R~t~~~i~~--h~w~~ 279 (370)
T KOG0583|consen 247 LSPEARSLIEKMLVPDPSTRITLLEILE--HPWFQ 279 (370)
T ss_pred CCHHHHHHHHHHcCCCcccCCCHHHHhh--Chhhc
Confidence 889999999999999999999999994 44443
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-45 Score=368.00 Aligned_cols=253 Identities=25% Similarity=0.371 Sum_probs=210.5
Q ss_pred ccccccCCCCCccEEEEEEECC------CCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 59 ENIVSEHGEKAPNVVYKGKLEN------QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
...+.+||+|+||.||+|...+ ...||||.++..... ...+|.+|++++..|+|||||+++|+|.+++..++|
T Consensus 488 i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~Mv 567 (774)
T KOG1026|consen 488 IVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMV 567 (774)
T ss_pred eeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEE
Confidence 4556889999999999998432 457999999877655 467899999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccC--------CC----CCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEcc
Q 011184 132 AEYMPNETLAKHLFHWE--------TH----PMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLST 199 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~--------~~----~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~D 199 (491)
+|||..|+|.++|+... +. +++..+.+.|+.||+.||.||-++. +|||||-..|+||+++..|||+|
T Consensus 568 FEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~-FVHRDLATRNCLVge~l~VKIsD 646 (774)
T KOG1026|consen 568 FEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH-FVHRDLATRNCLVGENLVVKISD 646 (774)
T ss_pred EEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc-ccccchhhhhceeccceEEEecc
Confidence 99999999999997431 12 3788999999999999999999996 99999999999999999999999
Q ss_pred CCCcccCCCCC------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhcccccccccc
Q 011184 200 FGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSC 272 (491)
Q Consensus 200 fgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~ 272 (491)
||+++..-... ...-.++|||||.|..+++|.+||||||||||||++| |+.|+.+..-+.+-. .+....
T Consensus 647 fGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe----~i~~g~ 722 (774)
T KOG1026|consen 647 FGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIE----CIRAGQ 722 (774)
T ss_pred cccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHH----HHHcCC
Confidence 99998643221 1123578999999999999999999999999999999 556665543322221 222222
Q ss_pred ccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccC
Q 011184 273 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 273 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
. -..|.++|.++.+||..||+.+|++||++.+|-..|+.+....
T Consensus 723 l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 723 L-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred c-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 2 3457788899999999999999999999999999998886543
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-45 Score=346.30 Aligned_cols=238 Identities=19% Similarity=0.267 Sum_probs=206.2
Q ss_pred ccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCC
Q 011184 61 IVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 137 (491)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~ 137 (491)
+.+.+|+|+||+||+|+ ..+.+.||+|.+.+.... +.+.+.+|+++++.++||||+.+++.|+...++|+|.||+.|
T Consensus 6 v~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g 85 (808)
T KOG0597|consen 6 VYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG 85 (808)
T ss_pred HHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh
Confidence 33445999999999999 556899999999764433 356799999999999999999999999999999999999985
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC----ccc
Q 011184 138 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYS 213 (491)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~~~ 213 (491)
+|..+|. ..+.++++.+..|+.+++.||.|||+.+ |+|||+||.|||++..|.+|+||||+|+...... ...
T Consensus 86 -~L~~il~--~d~~lpEe~v~~~a~~LVsaL~yLhs~r-ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsik 161 (808)
T KOG0597|consen 86 -DLFTILE--QDGKLPEEQVRAIAYDLVSALYYLHSNR-ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIK 161 (808)
T ss_pred -hHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhcC-cccccCCcceeeecCCCceeechhhhhhhcccCceeeeecc
Confidence 9999997 4578999999999999999999999998 9999999999999999999999999999766543 456
Q ss_pred cCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhc
Q 011184 214 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 293 (491)
Q Consensus 214 ~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 293 (491)
||+.|||||+..+.+|+..+|+||+||++||+++|++||........-..+.... ...|...+..+..|+..+|
T Consensus 162 GtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~------v~~p~~~S~~f~nfl~gLL 235 (808)
T KOG0597|consen 162 GTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDP------VKPPSTASSSFVNFLQGLL 235 (808)
T ss_pred CcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCC------CCCcccccHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999987665443333322221 1235578889999999999
Q ss_pred cCCCCCCCChhHHHH
Q 011184 294 QYEPRERPNPKSLVT 308 (491)
Q Consensus 294 ~~dp~~Rps~~~il~ 308 (491)
.+||..|.|..+++.
T Consensus 236 ~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 236 IKDPAQRLTWTDLLG 250 (808)
T ss_pred hcChhhcccHHHHhc
Confidence 999999999999885
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-43 Score=336.34 Aligned_cols=262 Identities=17% Similarity=0.230 Sum_probs=210.9
Q ss_pred CCCCccccCHHHHHHHhcCCccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCC---hhHHHHHHHHHhccCCC
Q 011184 37 GLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNN 113 (491)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~H~ 113 (491)
.+.+++.++.+++... .. ..+|+|++|.||+|.+ +|+.||||.++...... .+.+.+|+.+|++++||
T Consensus 8 ~~~~~~~i~~~~i~~~-----~~---~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 78 (283)
T PHA02988 8 YINDIKCIESDDIDKY-----TS---VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSN 78 (283)
T ss_pred hcCcceecCHHHcCCC-----CC---eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCC
Confidence 4455666777776321 11 2458999999999998 68899999997654333 45688999999999999
Q ss_pred CcceEEeEeec----CCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCccccccccccee
Q 011184 114 RLTNLLGCCCE----GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRIL 188 (491)
Q Consensus 114 niv~~~~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~~iiH~Dlkp~Nil 188 (491)
||+++++++.+ ....++||||+++|+|.+++.. ...+++.....++.|++.||.|||+. + ++||||||+|||
T Consensus 79 nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~-~~Hrdlkp~nil 155 (283)
T PHA02988 79 NILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDK--EKDLSFKTKLDMAIDCCKGLYNLYKYTN-KPYKNLTSVSFL 155 (283)
T ss_pred CEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhh--CCCCChhHHHHHHHHHHHHHHHHHhcCC-CCCCcCChhhEE
Confidence 99999999876 3468999999999999999974 45788999999999999999999985 6 889999999999
Q ss_pred eCCCCCeEEccCCCcccCCCC-CccccCCCCCCcccccC--CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccc
Q 011184 189 FDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL 265 (491)
Q Consensus 189 l~~~~~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~ 265 (491)
+++++.+||+|||+++..... ....++..|+|||++.+ ..++.++|||||||++|||++|+.||.......+.....
T Consensus 156 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~ 235 (283)
T PHA02988 156 VTENYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLII 235 (283)
T ss_pred ECCCCcEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 999999999999998754332 34457889999999976 678999999999999999999999987554332222111
Q ss_pred cccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccc
Q 011184 266 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 314 (491)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~ 314 (491)
........+...+..+.+++.+||+.||++|||+.+++..|+.+.
T Consensus 236 ----~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 236 ----NKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred ----hcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 111112234456789999999999999999999999999998775
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-44 Score=344.84 Aligned_cols=250 Identities=21% Similarity=0.346 Sum_probs=207.4
Q ss_pred cccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 58 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
+..+...||+|.||+||+|.|.+ .||||+++...... .+.|.+|+..+++-+|.||+-+.|+|..+.. .||+.+|
T Consensus 393 ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwC 469 (678)
T KOG0193|consen 393 EVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWC 469 (678)
T ss_pred Hhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhc
Confidence 34556788999999999999865 49999998766554 5679999999999999999999999998877 9999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC------C
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------G 209 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~------~ 209 (491)
.|.||+.+++-. ...+...+.+.|+.||+.|+.|||.++ |||||||..||++.+++.|||+|||++..... .
T Consensus 470 eGsSLY~hlHv~-etkfdm~~~idIAqQiaqGM~YLHAK~-IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~ 547 (678)
T KOG0193|consen 470 EGSSLYTHLHVQ-ETKFDMNTTIDIAQQIAQGMDYLHAKN-IIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQL 547 (678)
T ss_pred cCchhhhhccch-hhhhhHHHHHHHHHHHHHhhhhhhhhh-hhhhhccccceEEccCCcEEEecccceeeeeeecccccc
Confidence 999999999753 357889999999999999999999999 99999999999999999999999999864321 1
Q ss_pred CccccCCCCCCcccccCC---CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccccccccccc---CCCCchhHH
Q 011184 210 KSYSTNLAFTPPEYLRTG---RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE---GQFTDDDGT 283 (491)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~---~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 283 (491)
....|...|||||+++.. +|++.+||||||+|+|||++|..|+.....+.+ +..+...... .....+++.
T Consensus 548 ~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqI----ifmVGrG~l~pd~s~~~s~~pk 623 (678)
T KOG0193|consen 548 EQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQI----IFMVGRGYLMPDLSKIRSNCPK 623 (678)
T ss_pred CCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhhe----EEEecccccCccchhhhccCHH
Confidence 233467889999999753 599999999999999999999998875443322 2222222111 123446778
Q ss_pred HHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 284 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 284 ~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
++.+|+..||..++++||.+.+|+..|+.+...
T Consensus 624 ~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 624 AMKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred HHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 999999999999999999999999988877653
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-43 Score=318.13 Aligned_cols=265 Identities=19% Similarity=0.270 Sum_probs=212.1
Q ss_pred HHhcCCccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecC--
Q 011184 51 NATSGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEG-- 125 (491)
Q Consensus 51 ~~~~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~-- 125 (491)
...++..+++.+.+|++|+||+||+|+ .++++.||+|+++...... .---++|+.+|.+++|||||.+..+....
T Consensus 70 ~gCrsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~ 149 (419)
T KOG0663|consen 70 GGCRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNM 149 (419)
T ss_pred cCcccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccc
Confidence 344556678888999999999999999 5679999999998654222 34578999999999999999999987654
Q ss_pred CeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCccc
Q 011184 126 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 205 (491)
Q Consensus 126 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 205 (491)
+.+|||||||+ .+|...+... .+++...++.-++.|+++|++|||... |+||||||+|+|+++.|.+||+|||+|+.
T Consensus 150 d~iy~VMe~~E-hDLksl~d~m-~q~F~~~evK~L~~QlL~glk~lH~~w-ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ 226 (419)
T KOG0663|consen 150 DKIYIVMEYVE-HDLKSLMETM-KQPFLPGEVKTLMLQLLRGLKHLHDNW-ILHRDLKTSNLLLSHKGILKIADFGLARE 226 (419)
T ss_pred ceeeeeHHHHH-hhHHHHHHhc-cCCCchHHHHHHHHHHHHHHHHHhhce-eEecccchhheeeccCCcEEecccchhhh
Confidence 57999999998 7899988753 368999999999999999999999999 99999999999999999999999999998
Q ss_pred CCCC----CccccCCCCCCcccccCCC-CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccc---------
Q 011184 206 SRDG----KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS--------- 271 (491)
Q Consensus 206 ~~~~----~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~--------- 271 (491)
.... +..+.|.-|.|||++.+.+ |+...|+||+|||+.||+++++.|++.........++..+..+
T Consensus 227 ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~ 306 (419)
T KOG0663|consen 227 YGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYS 306 (419)
T ss_pred hcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcc
Confidence 7654 3456789999999999865 9999999999999999999999888764322111111111100
Q ss_pred ----------------cccCCCCch-hHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccCCCC
Q 011184 272 ----------------CLEGQFTDD-DGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVP 320 (491)
Q Consensus 272 ----------------~~~~~~~~~-~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~~ 320 (491)
.+...+... ++..-.+|+..+|..||.+|.|+++.|+ ..+..+.+.|
T Consensus 307 ~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~--h~~F~e~P~p 370 (419)
T KOG0663|consen 307 ELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK--HEYFRETPLP 370 (419)
T ss_pred ccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc--ccccccCCCC
Confidence 011112221 4577889999999999999999999998 5666664443
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-43 Score=347.21 Aligned_cols=253 Identities=23% Similarity=0.338 Sum_probs=200.7
Q ss_pred cccccccCCCCCccEEEEEEE------CCCCEEEEEEeCCCCCC-ChhHHHHHHHHHhcc-CCCCcceEEeEeecC-Cee
Q 011184 58 VENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEG-DER 128 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~-~~~ 128 (491)
.+++++.||.|+||.||+|.. .+++.||||+++..... ....+.+|+.++..+ +||||++++++|... +..
T Consensus 8 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 87 (338)
T cd05102 8 RLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPL 87 (338)
T ss_pred HceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCce
Confidence 456778889999999999973 22567999999754322 245689999999999 899999999988764 458
Q ss_pred EEEEecCCCCCHHHHhcccC------------------------------------------------------------
Q 011184 129 LLVAEYMPNETLAKHLFHWE------------------------------------------------------------ 148 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~------------------------------------------------------------ 148 (491)
++||||+++|+|.+++....
T Consensus 88 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (338)
T cd05102 88 MVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLW 167 (338)
T ss_pred EEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccc
Confidence 89999999999999986421
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC------CccccCCCCCCcc
Q 011184 149 THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPE 222 (491)
Q Consensus 149 ~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE 222 (491)
..++++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....+++.|+|||
T Consensus 168 ~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE 246 (338)
T cd05102 168 KSPLTMEDLICYSFQVARGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPE 246 (338)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHCC-EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcH
Confidence 134778889999999999999999998 999999999999999999999999998754322 1223467899999
Q ss_pred cccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCC
Q 011184 223 YLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 301 (491)
Q Consensus 223 ~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp 301 (491)
++.+..++.++|||||||++|||++ |..||........... .+... .....+...++.+.+|+.+||+.||.+||
T Consensus 247 ~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~l~~li~~cl~~dp~~RP 322 (338)
T cd05102 247 SIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQ---RLKDG-TRMRAPENATPEIYRIMLACWQGDPKERP 322 (338)
T ss_pred HhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHH---HHhcC-CCCCCCCCCCHHHHHHHHHHccCChhhCc
Confidence 9998889999999999999999997 8888765322111000 01111 11123445667899999999999999999
Q ss_pred ChhHHHHHhccccc
Q 011184 302 NPKSLVTALSPLQK 315 (491)
Q Consensus 302 s~~~il~~L~~~~~ 315 (491)
|+.++++.|+.+..
T Consensus 323 s~~el~~~l~~~~~ 336 (338)
T cd05102 323 TFSALVEILGDLLQ 336 (338)
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999987754
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=364.20 Aligned_cols=425 Identities=19% Similarity=0.170 Sum_probs=286.7
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCC---hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
..+++++.||+|+||.||+|.. .+|+.||||++....... .+.+.+|+++++.++||||+++++++..++..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 4567788889999999999995 458999999997543222 356899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccC---------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCc
Q 011184 133 EYMPNETLAKHLFHWE---------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLM 203 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 203 (491)
||++|++|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.++|+|||++
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G-IIHRDLKPeNILLd~dg~vKLiDFGLA 160 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG-VLHRDLKPDNILLGLFGEVVILDWGAA 160 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchheEEEcCCCCEEEEecCcc
Confidence 9999999999885311 123566788999999999999999998 999999999999999999999999998
Q ss_pred ccCCC----------------------CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhh
Q 011184 204 KNSRD----------------------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR 261 (491)
Q Consensus 204 ~~~~~----------------------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~ 261 (491)
+.... .....||+.|+|||++.+..++.++|||||||++|||+||+.|+.........
T Consensus 161 k~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~ 240 (932)
T PRK13184 161 IFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKIS 240 (932)
T ss_pred eecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhh
Confidence 75411 01235899999999999989999999999999999999999988653322111
Q ss_pred hccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCC-ChhHHHHHhccccccCCC--Ccc-----c----------
Q 011184 262 DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP-NPKSLVTALSPLQKETEV--PSH-----V---------- 323 (491)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp-s~~~il~~L~~~~~~~~~--~~~-----~---------- 323 (491)
.. ..+..+. ........++.+.+++.+||+.||++|| +++++++.|+.+...... +.. .
T Consensus 241 ~~--~~i~~P~-~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p~w~~~~~l~~~~~~~wk~~e~i 317 (932)
T PRK13184 241 YR--DVILSPI-EVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSPEWTVKATLMTKKKSCWKFYEPI 317 (932)
T ss_pred hh--hhccChh-hccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCcccccccccccccchhccccchh
Confidence 11 1111110 0011234567899999999999999996 677777777665432110 000 0
Q ss_pred --------ccCCCC------------CC---------------CCCCCCCCccccCcccchH-HHHH-----------HH
Q 011184 324 --------LMGIPH------------SA---------------SVSPLSPLGEACSRRDLTA-IHEI-----------LE 356 (491)
Q Consensus 324 --------~~~~~~------------~~---------------~~~~~~~~~~~~~~~~~~~-~~~~-----------l~ 356 (491)
....+. .. ...-..|......+.++.. -.-+ +.
T Consensus 318 Llsk~~~~l~~s~~~w~s~~is~ie~~~~~rie~~~~~~~~~~~~g~~l~p~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 397 (932)
T PRK13184 318 LLSKYFPMLESSPAQWYSLMISKIESSSETRLEYTVTKKGLHEGFGILLPPSEEAERGDFYCGYGLWLHIKNNELSVSLV 397 (932)
T ss_pred hhhhhcccccCCchhheeccccccccccceeeeeeeccCccccccceecCcccccccCccccccceeeecccccceeeee
Confidence 000000 00 0000000000000000000 0000 00
Q ss_pred hhcccCc----chhhhhhhhhhhh----------------------------------hhHHH--------------HHh
Q 011184 357 KISYKDD----EGVANELSFQMWT----------------------------------DQMQE--------------TLN 384 (491)
Q Consensus 357 ~i~~~~~----~~~~~~~~~~~~~----------------------------------~~~~~--------------~~~ 384 (491)
+-+...+ ........|..-. ..... ...
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (932)
T PRK13184 398 KNGLEIQKKSQEIISQQETFAIAIEKSNHRISLFVDQTLWIIHIDYLPSRGGRIGIIIQDLQDIMSNIAIFESSGALRVS 477 (932)
T ss_pred cccceeecCCcccccccceeeEEEEEecchhhhhcccceEEEeeeccccCCceEEEEEecchhhccceEEEEecCceeee
Confidence 0000000 0000000011000 00000 112
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCC--CcHHHHhhHHHHHHhc----C---ChHHHHHHHHHHHhhCCCchHHHH
Q 011184 385 SKKKGDVAFRQKDLKDAIECYTQFIDAGTM--VSPTVYARRSLCYLMS----D---MPQDALNDAMQAQIISPIWHIASY 455 (491)
Q Consensus 385 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~--~~~~~~~~~~~~~~~~----~---~~~~A~~~~~~al~l~p~~~~a~~ 455 (491)
...-.+++...+.|++|+..|++.-.--|. ...++.+..|.+.+.. | .+++|+..|++. .-.|.-+--|.
T Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 556 (932)
T PRK13184 478 CLAVPDAFLAEKLYDQALIFYRRIRESFPGRKEGYEAQFRLGITLLEKASEQGDPRDFTQALSEFSYL-HGGVGAPLEYL 556 (932)
T ss_pred cccCcHHHHhhHHHHHHHHHHHHHhhcCCCcccchHHHHHhhHHHHHHHHhcCChHHHHHHHHHHHHh-cCCCCCchHHH
Confidence 244566788889999999999999988875 3456777888877653 2 356666666653 34577777899
Q ss_pred HHHHHHHHCCChHHHHHHHHHHHcccccccc
Q 011184 456 LQAAALSAMGMENEAQVALKEGTTLEAKKNS 486 (491)
Q Consensus 456 ~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 486 (491)
.++.+|..+|+|+|-+++|.-|++..|+..+
T Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (932)
T PRK13184 557 GKALVYQRLGEYNEEIKSLLLALKRYSQHPE 587 (932)
T ss_pred hHHHHHHHhhhHHHHHHHHHHHHHhcCCCCc
Confidence 9999999999999999999999999988765
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-45 Score=337.58 Aligned_cols=243 Identities=18% Similarity=0.282 Sum_probs=205.6
Q ss_pred ccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCCC-hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 59 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
+..+..||+|+||.||+|. ..+++.||||++......+ .+.+.+|+.+|.+++++||.++++.+..+..++++||||.
T Consensus 15 ~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~ 94 (467)
T KOG0201|consen 15 YTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCG 94 (467)
T ss_pred cccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhc
Confidence 3444677999999999999 5568999999998655443 6789999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----CCcc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSY 212 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~ 212 (491)
||++.+.+. ....+.+..+.-++++++.||.|||+++ .+|||||+.|||+..+|.+||+|||++..... ..++
T Consensus 95 gGsv~~lL~--~~~~~~E~~i~~ilre~l~~l~ylH~~~-kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tf 171 (467)
T KOG0201|consen 95 GGSVLDLLK--SGNILDEFEIAVILREVLKGLDYLHSEK-KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTF 171 (467)
T ss_pred Ccchhhhhc--cCCCCccceeeeehHHHHHHhhhhhhcc-eecccccccceeEeccCcEEEEecceeeeeechhhccccc
Confidence 999999996 2344588888889999999999999998 99999999999999999999999998765433 2577
Q ss_pred ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 011184 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 292 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 292 (491)
.||+.|||||++.+..|+.++||||||++.+||++|.+|+..... ....-++....++.+...+++.+.+|+..|
T Consensus 172 vGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP-----mrvlflIpk~~PP~L~~~~S~~~kEFV~~C 246 (467)
T KOG0201|consen 172 VGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP-----MRVLFLIPKSAPPRLDGDFSPPFKEFVEAC 246 (467)
T ss_pred cccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc-----ceEEEeccCCCCCccccccCHHHHHHHHHH
Confidence 899999999999988999999999999999999999977643221 222223333334455557788999999999
Q ss_pred ccCCCCCCCChhHHHHH
Q 011184 293 LQYEPRERPNPKSLVTA 309 (491)
Q Consensus 293 l~~dp~~Rps~~~il~~ 309 (491)
|.+||+.|||+.++++.
T Consensus 247 L~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 247 LDKNPEFRPSAKELLKH 263 (467)
T ss_pred hhcCcccCcCHHHHhhh
Confidence 99999999999999863
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-43 Score=336.21 Aligned_cols=248 Identities=17% Similarity=0.176 Sum_probs=205.5
Q ss_pred CCccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEE
Q 011184 55 GFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
+..+++++..||+|+||.||+|+ ..+|..+|+|++++.. ....+....|-.+|...++|+||+++-.|++.+.+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 45677888999999999999999 5569999999998654 2345678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC--
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-- 208 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 208 (491)
||||+|||++..+|. ....+++.....++.+++.|+..+|..| +|||||||+|+|||..|++||+||||+.....
T Consensus 219 iMEylPGGD~mTLL~--~~~~L~e~~arfYiaE~vlAI~~iH~~g-yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~ 295 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLM--RKDTLTEDWARFYIAETVLAIESIHQLG-YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKH 295 (550)
T ss_pred EEEecCCccHHHHHH--hcCcCchHHHHHHHHHHHHHHHHHHHcC-cccccCChhheeecCCCCEeeccccccchhhhhh
Confidence 999999999999997 4578999999999999999999999999 99999999999999999999999999752100
Q ss_pred -----------------------C--------------------------CccccCCCCCCcccccCCCCCCCccchhHH
Q 011184 209 -----------------------G--------------------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFG 239 (491)
Q Consensus 209 -----------------------~--------------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG 239 (491)
. .+.+|||-|||||++.+..|+..+|.||||
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG 375 (550)
T KOG0605|consen 296 RIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLG 375 (550)
T ss_pred hhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHH
Confidence 0 023589999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCC---ChhHHHH
Q 011184 240 TLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP---NPKSLVT 308 (491)
Q Consensus 240 ~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp---s~~~il~ 308 (491)
||+||||.|.+||.++...........-.. .+...-...++.++.+||.+||. ||..|. .++||.+
T Consensus 376 ~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~--~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~ 444 (550)
T KOG0605|consen 376 CIMYEMLVGYPPFCSETPQETYRKIVNWRE--TLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKK 444 (550)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhh--hccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhc
Confidence 999999999999987765544332221110 01111112345899999999999 999995 5777765
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-44 Score=326.59 Aligned_cols=250 Identities=26% Similarity=0.346 Sum_probs=198.0
Q ss_pred ccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCC-----eeEEEEecCC
Q 011184 63 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD-----ERLLVAEYMP 136 (491)
Q Consensus 63 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~-----~~~lv~e~~~ 136 (491)
+.+|.|+||.||+|.+ .++..||||+... +.+.-.+|+++|+.++|||||++.-+|.... ...+||||||
T Consensus 30 ~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~----d~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP 105 (364)
T KOG0658|consen 30 RLIGSGSFGVVYQAKLRETEEEVAIKKVLQ----DKRYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMP 105 (364)
T ss_pred EEEeecccceEEEEEEcCCCceeEEEEecC----CCCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhch
Confidence 4559999999999995 4579999999843 3334458999999999999999999886532 3468999998
Q ss_pred CCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCC-CCeEEccCCCcccCCCC---C
Q 011184 137 NETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSRDG---K 210 (491)
Q Consensus 137 ~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~~~---~ 210 (491)
.||.+.+++. .+..++.-.+.-+..||++||.|||+.+ |+||||||.|+|+|.+ |.+||||||.|+....+ .
T Consensus 106 -~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~-IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epni 183 (364)
T KOG0658|consen 106 -ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG-ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNI 183 (364)
T ss_pred -HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC-cccCCCChheEEEcCCCCeEEeccCCcceeeccCCCce
Confidence 8999999753 2456888888899999999999999999 9999999999999955 99999999999875443 4
Q ss_pred ccccCCCCCCcccccCCC-CCCCccchhHHHHHHHHHhCCCCCCCchhhH----------------hhhc-------ccc
Q 011184 211 SYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDL----------------IRDR-------NLQ 266 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~~~~~~----------------~~~~-------~~~ 266 (491)
++..|..|+|||.+.+.. |+.+.||||.|||+.||+-|++.|+++.... +... ...
T Consensus 184 SYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p 263 (364)
T KOG0658|consen 184 SYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFP 263 (364)
T ss_pred eEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCc
Confidence 667899999999999865 9999999999999999999999998763221 1111 111
Q ss_pred ccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccCCCC
Q 011184 267 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVP 320 (491)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~~ 320 (491)
.+....+...+....++++.+|+.++|+.+|.+|.++.+++. .++..+...|
T Consensus 264 ~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~--h~fFdelr~~ 315 (364)
T KOG0658|consen 264 QIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA--HPFFDELRDP 315 (364)
T ss_pred ccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc--chhhHHhhCc
Confidence 122111112244567789999999999999999999999987 4455544433
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-43 Score=334.35 Aligned_cols=246 Identities=16% Similarity=0.229 Sum_probs=200.8
Q ss_pred cccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCC---CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 60 NIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
++++.||+|+||.||++. ..+|+.||||.+..... .....+.+|+.++..++|+||+++++++..++..++||||+
T Consensus 3 ~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~ 82 (285)
T cd05631 3 RHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIM 82 (285)
T ss_pred eEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEec
Confidence 455667999999999999 45789999999864332 22346789999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC---Ccc
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSY 212 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~ 212 (491)
++|+|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+|||+++++.++|+|||++...... ...
T Consensus 83 ~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 161 (285)
T cd05631 83 NGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER-IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGR 161 (285)
T ss_pred CCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecCC
Confidence 9999998886544457899999999999999999999999 999999999999999999999999998765432 234
Q ss_pred ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 011184 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 292 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 292 (491)
.||..|+|||++.+..++.++|||||||++|+|++|+.||...............+.. ....++...+.++.+|+.+|
T Consensus 162 ~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~li~~~ 239 (285)
T cd05631 162 VGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKE--DQEEYSEKFSEDAKSICRML 239 (285)
T ss_pred CCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhc--ccccCCccCCHHHHHHHHHH
Confidence 6789999999999889999999999999999999999988654321111111111111 11234556678999999999
Q ss_pred ccCCCCCCCC-----hhHHHH
Q 011184 293 LQYEPRERPN-----PKSLVT 308 (491)
Q Consensus 293 l~~dp~~Rps-----~~~il~ 308 (491)
|+.||.+||+ ++++++
T Consensus 240 l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 240 LTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred hhcCHHHhcCCCCCCHHHHhc
Confidence 9999999997 777776
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-43 Score=343.01 Aligned_cols=254 Identities=24% Similarity=0.373 Sum_probs=211.2
Q ss_pred cccccCCCCCccEEEEEEECC--C---CEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 60 NIVSEHGEKAPNVVYKGKLEN--Q---RRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~~~--~---~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
.+...||+|+||.||+|.+.. + ..||||..+... ......|.+|++++++++|||||+++|++.....++||
T Consensus 160 ~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~iv 239 (474)
T KOG0194|consen 160 ELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLV 239 (474)
T ss_pred cccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEE
Confidence 445788999999999999533 2 238999987522 23456899999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 210 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 210 (491)
||+|+||+|.++|... ...++..++..++.+.+.||+|||+++ +|||||-.+|+|++.++.+||+|||+++......
T Consensus 240 mEl~~gGsL~~~L~k~-~~~v~~~ek~~~~~~AA~Gl~YLh~k~-~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~ 317 (474)
T KOG0194|consen 240 MELCNGGSLDDYLKKN-KKSLPTLEKLRFCYDAARGLEYLHSKN-CIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVM 317 (474)
T ss_pred EEecCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHhHHHHHHHCC-CcchhHhHHHheecCCCeEEeCccccccCCcceee
Confidence 9999999999999853 236999999999999999999999998 9999999999999999999999999987654211
Q ss_pred ---ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHH
Q 011184 211 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 211 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
...-...|+|||.+..+.+++++|||||||++||+++ |..|+++.....+...... .......+...+.++.
T Consensus 318 ~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~----~~~r~~~~~~~p~~~~ 393 (474)
T KOG0194|consen 318 KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVK----NGYRMPIPSKTPKELA 393 (474)
T ss_pred ccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHh----cCccCCCCCCCHHHHH
Confidence 1123578999999999999999999999999999999 7778877655544433311 1122234456778999
Q ss_pred HHHHHhccCCCCCCCChhHHHHHhccccccCCC
Q 011184 287 RLASRCLQYEPRERPNPKSLVTALSPLQKETEV 319 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~ 319 (491)
.++.+||..+|++||||.++.+.|+.+......
T Consensus 394 ~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 394 KVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred HHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 999999999999999999999999998876554
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-43 Score=339.99 Aligned_cols=236 Identities=20% Similarity=0.240 Sum_probs=198.8
Q ss_pred cCCCCCccEEEEEEE-CCCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCC
Q 011184 64 EHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 139 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gs 139 (491)
.||+|+||.||++.. .+|+.||||+++... ......+.+|+.++++++||||+++++++..++..++||||+++++
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~ 81 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCc
Confidence 469999999999994 568999999997532 1224567889999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----CCccccC
Q 011184 140 LAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTN 215 (491)
Q Consensus 140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~t 215 (491)
|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... .....||
T Consensus 82 L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~-ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt 158 (323)
T cd05571 82 LFFHLSR--ERVFSEDRARFYGAEIVSALGYLHSCD-VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT 158 (323)
T ss_pred HHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecC
Confidence 9998863 467899999999999999999999999 99999999999999999999999999875322 2345689
Q ss_pred CCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccC
Q 011184 216 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 295 (491)
Q Consensus 216 ~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~ 295 (491)
+.|+|||++.+..++.++|||||||++|||++|+.||............... ...++..++.++.+++.+||+.
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~li~~~L~~ 232 (323)
T cd05571 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------EIRFPRTLSPEAKSLLAGLLKK 232 (323)
T ss_pred ccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHHccC
Confidence 9999999999888999999999999999999999988655433322211111 1234556778999999999999
Q ss_pred CCCCCC-----ChhHHHH
Q 011184 296 EPRERP-----NPKSLVT 308 (491)
Q Consensus 296 dp~~Rp-----s~~~il~ 308 (491)
||++|| ++.++++
T Consensus 233 dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 233 DPKQRLGGGPEDAKEIME 250 (323)
T ss_pred CHHHcCCCCCCCHHHHHc
Confidence 999999 7888876
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-43 Score=336.10 Aligned_cols=247 Identities=18% Similarity=0.201 Sum_probs=216.5
Q ss_pred ccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecCCe-eEEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDE-RLLVA 132 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~-~~lv~ 132 (491)
..|..+.++|+|+||.++..+ ..++..+++|.+....... .+...+|+.++++++|||||.+.+.|..++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 457788899999999999998 4457899999997554333 4468899999999999999999999999888 99999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC---
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 209 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 209 (491)
+|++||+|.+.+...++..++++.+..|+.|++.|+.|||++. |+|||||+.||+++.++.++|+|||+|+.....
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~-iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~ 162 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR-VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSL 162 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh-hhcccchhhhhhccccCceeecchhhhhhcCCchhh
Confidence 9999999999998766678999999999999999999999887 999999999999999999999999999986654
Q ss_pred -CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHH
Q 011184 210 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 288 (491)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (491)
.+..||+.||+||++.+.+|..|+|||||||++|||++-+++|.......+...+...... ..+...+.++..+
T Consensus 163 a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~-----Plp~~ys~el~~l 237 (426)
T KOG0589|consen 163 ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYS-----PLPSMYSSELRSL 237 (426)
T ss_pred hheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCC-----CCCccccHHHHHH
Confidence 4568999999999999999999999999999999999999998877665554444444322 3455677899999
Q ss_pred HHHhccCCCCCCCChhHHHHH
Q 011184 289 ASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~ 309 (491)
|..||+.+|..||++.++|..
T Consensus 238 v~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 238 VKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred HHHHhhcCCccCCCHHHHhhC
Confidence 999999999999999999976
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-43 Score=340.59 Aligned_cols=245 Identities=17% Similarity=0.194 Sum_probs=204.5
Q ss_pred CccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
+..+++++.||+|+||.||++... +++.||||+++... ......+.+|+.++++++||||+++++++..++..++|
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 456778888999999999999954 58999999986432 12345688999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-C
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-K 210 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~ 210 (491)
|||++|++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++...... .
T Consensus 97 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 173 (329)
T PTZ00263 97 LEFVVGGELFTHLRK--AGRFPNDVAKFYHAELVLAFEYLHSKD-IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTF 173 (329)
T ss_pred EcCCCCChHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHEEECCCCCEEEeeccCceEcCCCcc
Confidence 999999999999873 457889999999999999999999999 999999999999999999999999998865433 3
Q ss_pred ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 211 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
...||+.|+|||++.+..++.++|||||||++|+|++|..||............... ...++...+..+.+|+.
T Consensus 174 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~ 247 (329)
T PTZ00263 174 TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAG------RLKFPNWFDGRARDLVK 247 (329)
T ss_pred eecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcC------CcCCCCCCCHHHHHHHH
Confidence 456899999999999888999999999999999999999998654332222111111 11234446678999999
Q ss_pred HhccCCCCCCCC-----hhHHHHH
Q 011184 291 RCLQYEPRERPN-----PKSLVTA 309 (491)
Q Consensus 291 ~cl~~dp~~Rps-----~~~il~~ 309 (491)
+||+.||.+||+ +++++..
T Consensus 248 ~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 248 GLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred HHhhcCHHHcCCCCCCCHHHHhcC
Confidence 999999999986 5777753
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-42 Score=326.16 Aligned_cols=251 Identities=18% Similarity=0.189 Sum_probs=205.1
Q ss_pred CccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCC--------------ChhHHHHHHHHHhccCCCCcceEEe
Q 011184 56 FAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP--------------DPRQFLEEARSVGQLRNNRLTNLLG 120 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--------------~~~~~~~E~~~l~~l~H~niv~~~~ 120 (491)
...|+++.+||+|.||.|-+|+ ..+++.||||++.+..+. ..+...+|+.+|++++|||||+|+.
T Consensus 96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiE 175 (576)
T KOG0585|consen 96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIE 175 (576)
T ss_pred hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEE
Confidence 4567888999999999999999 456899999999653221 1357889999999999999999999
Q ss_pred EeecC--CeeEEEEecCCCCCHHHHhcccCCCC-CCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEE
Q 011184 121 CCCEG--DERLLVAEYMPNETLAKHLFHWETHP-MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRL 197 (491)
Q Consensus 121 ~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~-l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl 197 (491)
+..+. +.+|||+|||..|.+...- ..++ +++.+.++++.++..||+|||.+| ||||||||+|+||+++|++||
T Consensus 176 vLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~Qg-iiHRDIKPsNLLl~~~g~VKI 251 (576)
T KOG0585|consen 176 VLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQG-IIHRDIKPSNLLLSSDGTVKI 251 (576)
T ss_pred eecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhcC-eeccccchhheEEcCCCcEEe
Confidence 98765 6799999999998875433 3455 899999999999999999999999 999999999999999999999
Q ss_pred ccCCCcccCCCC---------CccccCCCCCCcccccCCC----CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcc
Q 011184 198 STFGLMKNSRDG---------KSYSTNLAFTPPEYLRTGR----VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN 264 (491)
Q Consensus 198 ~Dfgla~~~~~~---------~~~~~t~~y~aPE~~~~~~----~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~ 264 (491)
+|||.+..+..+ ....||+.|+|||...++. .+.+.||||+||+||.|+.|+.||.++.......++
T Consensus 252 sDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KI 331 (576)
T KOG0585|consen 252 SDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKI 331 (576)
T ss_pred eccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHH
Confidence 999988755222 2357999999999988743 466899999999999999999999887665555444
Q ss_pred ccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccc
Q 011184 265 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 314 (491)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~ 314 (491)
...... ..-.+++.+.+.+||.++|.+||+.|.+..+|........
T Consensus 332 vn~pL~----fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~ 377 (576)
T KOG0585|consen 332 VNDPLE----FPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTR 377 (576)
T ss_pred hcCccc----CCCcccccHHHHHHHHHHhhcChhheeehhhheecceecc
Confidence 333221 1112246789999999999999999999999987655443
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-43 Score=350.33 Aligned_cols=339 Identities=20% Similarity=0.233 Sum_probs=252.5
Q ss_pred cccCHHHHHHHhcCCcc------ccccccCCCCCccEEEEEEECC----CCEEEEEEeCCCCCC-ChhHHHHHHHHHhcc
Q 011184 42 REFTLEQLKNATSGFAV------ENIVSEHGEKAPNVVYKGKLEN----QRRIAVKRFNRMAWP-DPRQFLEEARSVGQL 110 (491)
Q Consensus 42 ~~~~~~~~~~~~~~~~~------~~~i~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l 110 (491)
.-+++|+.-++...|.. ..|-++||.|.||.||+|.++- ...||||.++.+... ...+|+.|+.||.++
T Consensus 608 DP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF 687 (996)
T KOG0196|consen 608 DPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF 687 (996)
T ss_pred CCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC
Confidence 45677887777777643 2445677999999999999643 356999999976643 356899999999999
Q ss_pred CCCCcceEEeEeecCCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeC
Q 011184 111 RNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 190 (491)
Q Consensus 111 ~H~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~ 190 (491)
+||||++|.|+......++||.|||++|+|+.+|+... +.+++.++..++++|+.||+||-+.+ +|||||...|||++
T Consensus 688 dHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLsdm~-YVHRDLAARNILVN 765 (996)
T KOG0196|consen 688 DHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLSDMN-YVHRDLAARNILVN 765 (996)
T ss_pred CCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHhhcC-chhhhhhhhheeec
Confidence 99999999999999999999999999999999998744 56999999999999999999999999 99999999999999
Q ss_pred CCCCeEEccCCCcccCCCCC-ccc----c--CCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhh
Q 011184 191 EDGNPRLSTFGLMKNSRDGK-SYS----T--NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRD 262 (491)
Q Consensus 191 ~~~~~kl~Dfgla~~~~~~~-~~~----~--t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~ 262 (491)
.+..+|++|||+++...+.. ... | .+.|.|||.+...++|.+|||||||||+||.++ |.+|++......+..
T Consensus 766 snLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIk 845 (996)
T KOG0196|consen 766 SNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIK 845 (996)
T ss_pred cceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHH
Confidence 99999999999998765443 111 1 368999999999999999999999999999887 778887654333322
Q ss_pred ccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccCCCCcccccCCCCCCCCCCCCCCccc
Q 011184 263 RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEA 342 (491)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (491)
..-.. .....|.++|..+.+|+..||++|-.+||.+.+|+..|+++.+.+..-.... +.....+...+....
T Consensus 846 aIe~g-----yRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk~~~---~~~~r~s~~lld~~~ 917 (996)
T KOG0196|consen 846 AIEQG-----YRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLKTIA---PESPRPSQPLLDRSG 917 (996)
T ss_pred HHHhc-----cCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhcccC---CCCCCCcccccCCCC
Confidence 22111 1223366788999999999999999999999999999999987643211110 011111111111122
Q ss_pred cCcccchHHHHHHHhhcccCcchh---hhhhhhhhhhhhHHHHHhHHHHHHHH
Q 011184 343 CSRRDLTAIHEILEKISYKDDEGV---ANELSFQMWTDQMQETLNSKKKGDVA 392 (491)
Q Consensus 343 ~~~~~~~~~~~~l~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~ 392 (491)
..-..+..+.+||+.|+-..-.+. +.-.+++...+ .+++.+...|..+
T Consensus 918 ~~~~~f~sv~~WL~aIkm~rY~~~F~~ag~~s~~~V~q--~s~eDl~~~Gitl 968 (996)
T KOG0196|consen 918 SDFTPFRSVGDWLEAIKMGRYKEHFAAAGYTSFEDVAQ--MSAEDLLRLGITL 968 (996)
T ss_pred CCCcccCCHHHHHHHhhhhHHHHHHHhcCcccHHHHHh--hhHHHHHhhceee
Confidence 333456678899998874433322 22223332222 2455666666653
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-43 Score=335.03 Aligned_cols=243 Identities=18% Similarity=0.186 Sum_probs=202.9
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC---CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
.+++++.||+|+||.||++.. .+++.||||++..... .....+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 81 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME 81 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence 356678889999999999995 4689999999864321 234568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-Ccc
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSY 212 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~ 212 (491)
|+++++|.+++.. .+.+++.....++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++...... ...
T Consensus 82 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (291)
T cd05612 82 YVPGGELFSYLRN--SGRFSNSTGLFYASEIVCALEYLHSKE-IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTL 158 (291)
T ss_pred CCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEEEecCcchhccCCcccc
Confidence 9999999999863 457899999999999999999999999 999999999999999999999999998765433 345
Q ss_pred ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 011184 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 292 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 292 (491)
.||+.|+|||++.+..++.++|||||||++|+|++|+.||............... ...++...+..+.+|+.+|
T Consensus 159 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~ 232 (291)
T cd05612 159 CGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAG------KLEFPRHLDLYAKDLIKKL 232 (291)
T ss_pred cCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CcCCCccCCHHHHHHHHHH
Confidence 6899999999999888999999999999999999999988765433222211111 1123445567899999999
Q ss_pred ccCCCCCCCC-----hhHHHHH
Q 011184 293 LQYEPRERPN-----PKSLVTA 309 (491)
Q Consensus 293 l~~dp~~Rps-----~~~il~~ 309 (491)
|+.||.+||+ +++++..
T Consensus 233 l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 233 LVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred cCCCHHHccCCccCCHHHHhcC
Confidence 9999999995 8888764
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-43 Score=321.42 Aligned_cols=244 Identities=20% Similarity=0.310 Sum_probs=197.8
Q ss_pred ccccCCCCCccEEEEEE-ECCCCEEEEEEeCC--CCCCChhHHHHHHHHHhccCCCCcceEEeEeec-----CCeeEEEE
Q 011184 61 IVSEHGEKAPNVVYKGK-LENQRRIAVKRFNR--MAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE-----GDERLLVA 132 (491)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~-----~~~~~lv~ 132 (491)
.++.+|+|++|.|+.+. ..+|..||||++.. ......++..+|+.+|+.++|+||+.+++++.. -+.+|+|+
T Consensus 26 ~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~ 105 (359)
T KOG0660|consen 26 LIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVF 105 (359)
T ss_pred ccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEeh
Confidence 36788999999999999 56799999999973 333346788999999999999999999999866 25689999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---- 208 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---- 208 (491)
|+|. .+|...+. .++.++......+++|+++||+|+|+.+ |+||||||+|+|++.+..+||+|||+|+....
T Consensus 106 elMe-tDL~~iik--~~~~L~d~H~q~f~YQiLrgLKyiHSAn-ViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~ 181 (359)
T KOG0660|consen 106 ELME-TDLHQIIK--SQQDLTDDHAQYFLYQILRGLKYIHSAN-VIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFED 181 (359)
T ss_pred hHHh-hHHHHHHH--cCccccHHHHHHHHHHHHHhcchhhccc-ccccccchhheeeccCCCEEeccccceeeccccCcc
Confidence 9994 89999886 3455999999999999999999999999 99999999999999999999999999997742
Q ss_pred --CCccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhH-------------------hhhc---
Q 011184 209 --GKSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-------------------IRDR--- 263 (491)
Q Consensus 209 --~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~-------------------~~~~--- 263 (491)
.+.+..|..|.|||++.. ..|+...||||+|||+.||++|++.|++...-. +...
T Consensus 182 ~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar 261 (359)
T KOG0660|consen 182 GFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKAR 261 (359)
T ss_pred cchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHH
Confidence 145667899999998765 459999999999999999999999888752110 1100
Q ss_pred -cccccc--cccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 264 -NLQMLT--DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 264 -~~~~~~--~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.+..++ ++.......+..++...+|+.+||..||.+|+|++++++
T Consensus 262 ~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 262 PYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred HHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 001010 000111122356789999999999999999999999998
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-43 Score=341.78 Aligned_cols=239 Identities=20% Similarity=0.313 Sum_probs=207.8
Q ss_pred CCccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCC---CCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeE
Q 011184 55 GFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERL 129 (491)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~ 129 (491)
+....+++++||+|+||+|+++... +++.+|||++++.. ..+.+....|..++... +||.++.++.+|+..+++|
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 3455678889999999999999954 58899999998754 33467788999999988 5999999999999999999
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC--
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR-- 207 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~-- 207 (491)
+||||+.||++..+. ....+++..+.-++..|+.||.|||+++ ||+||||.+|||+|.+|.+||+|||+++...
T Consensus 446 fvmey~~Ggdm~~~~---~~~~F~e~rarfyaAev~l~L~fLH~~~-IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~ 521 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHI---HTDVFSEPRARFYAAEVVLGLQFLHENG-IIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ 521 (694)
T ss_pred EEEEecCCCcEEEEE---ecccccHHHHHHHHHHHHHHHHHHHhcC-ceeeecchhheEEcccCcEEecccccccccCCC
Confidence 999999999954333 4578999999999999999999999999 9999999999999999999999999998643
Q ss_pred --CCCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHH
Q 011184 208 --DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 285 (491)
Q Consensus 208 --~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (491)
...+++||+.|||||++.+..|+.+.|.|||||+||||+.|..||+++..+.+-+.+... ...+|..++.+.
T Consensus 522 g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d------~~~yP~~ls~ea 595 (694)
T KOG0694|consen 522 GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVND------EVRYPRFLSKEA 595 (694)
T ss_pred CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcC------CCCCCCcccHHH
Confidence 345789999999999999999999999999999999999999999988766655443332 234677888999
Q ss_pred HHHHHHhccCCCCCCCCh
Q 011184 286 VRLASRCLQYEPRERPNP 303 (491)
Q Consensus 286 ~~li~~cl~~dp~~Rps~ 303 (491)
.+++.++|..+|++|..+
T Consensus 596 ~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 596 IAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HHHHHHHhccCcccccCC
Confidence 999999999999999744
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=335.65 Aligned_cols=235 Identities=20% Similarity=0.228 Sum_probs=196.4
Q ss_pred CCCCCccEEEEEEE-CCCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCCH
Q 011184 65 HGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL 140 (491)
Q Consensus 65 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gsL 140 (491)
||+|+||.||++.. .+++.||+|+++... ......+.+|+.++.+++||||+++++++..++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 59999999999995 458899999986432 22345688999999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----CCccccCC
Q 011184 141 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTNL 216 (491)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~t~ 216 (491)
.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.++|+|||+++.... .....||+
T Consensus 81 ~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 157 (312)
T cd05585 81 FHHLQR--EGRFDLSRARFYTAELLCALENLHKFN-VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTP 157 (312)
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCc
Confidence 999863 457899999999999999999999999 99999999999999999999999999875322 22346899
Q ss_pred CCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCC
Q 011184 217 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 296 (491)
Q Consensus 217 ~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d 296 (491)
.|+|||++.+..++.++|||||||++|+|++|..||............... ...++...++++.+++.+||+.|
T Consensus 158 ~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~L~~d 231 (312)
T cd05585 158 EYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQE------PLRFPDGFDRDAKDLLIGLLSRD 231 (312)
T ss_pred ccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcC------CCCCCCcCCHHHHHHHHHHcCCC
Confidence 999999999888999999999999999999999998765443322221111 12345567789999999999999
Q ss_pred CCCCCCh---hHHHH
Q 011184 297 PRERPNP---KSLVT 308 (491)
Q Consensus 297 p~~Rps~---~~il~ 308 (491)
|.+||++ .+++.
T Consensus 232 p~~R~~~~~~~e~l~ 246 (312)
T cd05585 232 PTRRLGYNGAQEIKN 246 (312)
T ss_pred HHHcCCCCCHHHHHc
Confidence 9999865 55544
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-43 Score=302.51 Aligned_cols=244 Identities=21% Similarity=0.256 Sum_probs=210.3
Q ss_pred ccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCC---CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 59 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
.++.+.||+|-||.||.|+ ..++-.||+|++.+... .-..++.+|+++-+.|+||||++++++|.+....||++||
T Consensus 24 feigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEy 103 (281)
T KOG0580|consen 24 FEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEY 103 (281)
T ss_pred ccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEe
Confidence 4566777999999999999 55688999999865331 2356799999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC--CCCcc
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR--DGKSY 212 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~--~~~~~ 212 (491)
.++|+|...|.......+++.....++.|++.||.|+|.++ ||||||||+|+|++..+.+|++|||-+.... ...+.
T Consensus 104 a~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~-VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tl 182 (281)
T KOG0580|consen 104 APRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKTL 182 (281)
T ss_pred cCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC-cccCCCCHHHhccCCCCCeeccCCCceeecCCCCceee
Confidence 99999999998666778999999999999999999999998 9999999999999999999999999876543 34577
Q ss_pred ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 011184 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 292 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 292 (491)
+||.-|.+||+..+...+...|+|++|+++||++.|.+||............... .-.+|..++.++.++|.+|
T Consensus 183 cgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~------~~~~p~~is~~a~dlI~~l 256 (281)
T KOG0580|consen 183 CGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKV------DLKFPSTISGGAADLISRL 256 (281)
T ss_pred ecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHc------cccCCcccChhHHHHHHHH
Confidence 8999999999999999999999999999999999999998765533332222111 1234567788999999999
Q ss_pred ccCCCCCCCChhHHHHH
Q 011184 293 LQYEPRERPNPKSLVTA 309 (491)
Q Consensus 293 l~~dp~~Rps~~~il~~ 309 (491)
+.++|.+|.+..+++..
T Consensus 257 l~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 257 LVKNPIERLALTEVMDH 273 (281)
T ss_pred hccCccccccHHHHhhh
Confidence 99999999999999874
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-42 Score=333.75 Aligned_cols=251 Identities=19% Similarity=0.227 Sum_probs=201.8
Q ss_pred ccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
..++++..||+|+||.||++... ++..||+|.+...... ....+.+|+++++.++||||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence 35677888999999999999954 6889999998754321 245789999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC--Ccc
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSY 212 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~~ 212 (491)
+++++|.+++.. ...+++..+..++.|++.||.|||+.+.|+||||||+|||++.++.+||+|||++...... ...
T Consensus 85 ~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 162 (331)
T cd06649 85 MDGGSLDQVLKE--AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 162 (331)
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccC
Confidence 999999999863 4568999999999999999999998633999999999999999999999999998754332 345
Q ss_pred ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccc-------------------------
Q 011184 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM------------------------- 267 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~------------------------- 267 (491)
.+++.|+|||++.+..++.++|||||||++|||++|+.||.......+.......
T Consensus 163 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (331)
T cd06649 163 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSG 242 (331)
T ss_pred CCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccc
Confidence 6889999999999888999999999999999999999988543222111000000
Q ss_pred -----------------cccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 268 -----------------LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 268 -----------------~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
+.............+.++.+|+.+||+.||++|||+.++++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 243 HGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred cccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000000001112356789999999999999999999999974
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-43 Score=319.82 Aligned_cols=244 Identities=17% Similarity=0.253 Sum_probs=209.4
Q ss_pred ccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCCChh---HHHHHHHHHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPR---QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~---~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
..|++...||+|.||.|-+++ ...|+.||||.++++...+.. .+.+|++||+.|+||||+.++.+|.+.+.+.|||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 357788899999999999999 567999999999887766544 5779999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC---
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 209 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 209 (491)
||..+|.|++|+.. .+.+++.+...+++||.+|+.|+|.++ ++|||||.+|||+|.++++||+|||++-.+.+.
T Consensus 133 EYaS~GeLYDYiSe--r~~LsErEaRhfFRQIvSAVhYCHknr-VvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfL 209 (668)
T KOG0611|consen 133 EYASGGELYDYISE--RGSLSEREARHFFRQIVSAVHYCHKNR-VVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFL 209 (668)
T ss_pred EecCCccHHHHHHH--hccccHHHHHHHHHHHHHHHHHHhhcc-ceecccchhheeecCCCCeeeeccchhhhhccccHH
Confidence 99999999999974 567999999999999999999999998 999999999999999999999999998876654
Q ss_pred CccccCCCCCCcccccCCCC-CCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHH
Q 011184 210 KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 288 (491)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (491)
++++|++.|.+||++.|.+| ++..|.|||||+||.|..|..||.+.....+-. ++..... +.+.-+.+..-|
T Consensus 210 qTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvr----QIs~GaY---rEP~~PSdA~gL 282 (668)
T KOG0611|consen 210 QTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVR----QISRGAY---REPETPSDASGL 282 (668)
T ss_pred HHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHH----Hhhcccc---cCCCCCchHHHH
Confidence 57899999999999999886 578999999999999999999998764332211 1111110 112233578889
Q ss_pred HHHhccCCCCCCCChhHHHHHh
Q 011184 289 ASRCLQYEPRERPNPKSLVTAL 310 (491)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~L 310 (491)
|++||..||++|.|+++|...-
T Consensus 283 IRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 283 IRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred HHHHHhcCcccchhHHHHhhhh
Confidence 9999999999999999998764
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-42 Score=337.26 Aligned_cols=245 Identities=17% Similarity=0.212 Sum_probs=203.8
Q ss_pred CccccccccCCCCCccEEEEEEECC--CCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLEN--QRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
+..+.++..||+|+||.||+|...+ +..||+|++.... ......+.+|+.+++.++||||+++++++..++..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 4457778889999999999998533 3689999986422 2234578899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC-C
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-G 209 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-~ 209 (491)
||||+++|+|.+++.. ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++..... .
T Consensus 109 v~Ey~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~ 185 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRR--NKRFPNDVGCFYAAQIVLIFEYLQSLN-IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRT 185 (340)
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEccCCCHHHEEECCCCCEEEecCCCCeecCCCc
Confidence 9999999999999963 457899999999999999999999999 99999999999999999999999999876543 2
Q ss_pred CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHH
Q 011184 210 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 289 (491)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 289 (491)
....||+.|+|||++.+..++.++|||||||++|||++|..||................ ..++...+..+.+++
T Consensus 186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~------~~~p~~~~~~~~~li 259 (340)
T PTZ00426 186 YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGI------IYFPKFLDNNCKHLM 259 (340)
T ss_pred ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCC------CCCCCCCCHHHHHHH
Confidence 34568999999999998889999999999999999999999987654332222211111 123455667899999
Q ss_pred HHhccCCCCCCC-----ChhHHHHH
Q 011184 290 SRCLQYEPRERP-----NPKSLVTA 309 (491)
Q Consensus 290 ~~cl~~dp~~Rp-----s~~~il~~ 309 (491)
.+||+.||.+|+ +++++++.
T Consensus 260 ~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 260 KKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred HHHcccCHHHcCCCCCCCHHHHHcC
Confidence 999999999995 78888764
|
|
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-42 Score=322.86 Aligned_cols=249 Identities=20% Similarity=0.280 Sum_probs=202.1
Q ss_pred cccccccCCCCCccEEEEEEEC----CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE----NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
.+++...||+|+||.||+|++. .+..||+|.++..... ....+.+|+.++.+++||||+++++++..++..++||
T Consensus 6 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 85 (266)
T cd05064 6 SIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVT 85 (266)
T ss_pred HeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEE
Confidence 4566778899999999999853 3568999999764322 2357889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC--
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-- 210 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 210 (491)
||+++|+|.+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.++++|||.+.......
T Consensus 86 e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~i~~al~~lH~~~-iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~ 163 (266)
T cd05064 86 EYMSNGALDSFLRK-HEGQLVAGQLMGMLPGLASGMKYLSEMG-YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIY 163 (266)
T ss_pred EeCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeeccccHhhEEEcCCCcEEECCCcccccccccchh
Confidence 99999999999864 2357899999999999999999999998 9999999999999999999999999865432221
Q ss_pred ---ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHH
Q 011184 211 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 211 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
...++..|+|||.+.+..++.++|||||||++||+++ |..|+............... .....+..++..+.
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 238 (266)
T cd05064 164 TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDG-----FRLPAPRNCPNLLH 238 (266)
T ss_pred cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC-----CCCCCCCCCCHHHH
Confidence 1234578999999998899999999999999999875 88887654332221111111 11123445678899
Q ss_pred HHHHHhccCCCCCCCChhHHHHHhccc
Q 011184 287 RLASRCLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~L~~~ 313 (491)
+++.+||+.+|.+||++++|++.|..+
T Consensus 239 ~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 239 QLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 999999999999999999999988654
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-42 Score=334.22 Aligned_cols=237 Identities=19% Similarity=0.239 Sum_probs=198.6
Q ss_pred cCCCCCccEEEEEEE-CCCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCC
Q 011184 64 EHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 139 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gs 139 (491)
.||+|+||.||++.. .+++.||||++.... ......+.+|+.+++.++||||+++++++..++..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~ 81 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGE 81 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCC
Confidence 469999999999994 568999999997532 2234568899999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----CCccccC
Q 011184 140 LAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTN 215 (491)
Q Consensus 140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~t 215 (491)
|..++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .....||
T Consensus 82 L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt 158 (328)
T cd05593 82 LFFHLSR--ERVFSEDRTRFYGAEIVSALDYLHSGK-IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGT 158 (328)
T ss_pred HHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCC
Confidence 9988863 457899999999999999999999999 99999999999999999999999999875322 1234689
Q ss_pred CCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccC
Q 011184 216 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 295 (491)
Q Consensus 216 ~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~ 295 (491)
+.|+|||++.+..++.++|||||||++|+|++|+.||............... ...++...+.++.+++.+||+.
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~li~~~L~~ 232 (328)
T cd05593 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------DIKFPRTLSADAKSLLSGLLIK 232 (328)
T ss_pred cCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccC------CccCCCCCCHHHHHHHHHHcCC
Confidence 9999999999888999999999999999999999998654433222211111 1234556778999999999999
Q ss_pred CCCCCC-----ChhHHHHH
Q 011184 296 EPRERP-----NPKSLVTA 309 (491)
Q Consensus 296 dp~~Rp-----s~~~il~~ 309 (491)
||.+|| ++.++++.
T Consensus 233 dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 233 DPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CHHHcCCCCCCCHHHHhcC
Confidence 999997 78888864
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=328.78 Aligned_cols=253 Identities=21% Similarity=0.279 Sum_probs=196.6
Q ss_pred cccccccCCCCCccEEEEEEECC-----------------CCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLEN-----------------QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLL 119 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~ 119 (491)
.+.+.++||+|+||.||++.+.+ +..||+|.+...... ....+.+|++++.+++||||++++
T Consensus 6 ~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 85 (304)
T cd05096 6 HLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLL 85 (304)
T ss_pred hCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEE
Confidence 45667788999999999998532 346999998754322 245789999999999999999999
Q ss_pred eEeecCCeeEEEEecCCCCCHHHHhcccC-----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccc
Q 011184 120 GCCCEGDERLLVAEYMPNETLAKHLFHWE-----------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL 182 (491)
Q Consensus 120 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-----------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dl 182 (491)
+++...+..++||||+++++|.+++.... ...+++..+++++.||+.||.|||+.+ ++||||
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-ivH~dl 164 (304)
T cd05096 86 GVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN-FVHRDL 164 (304)
T ss_pred EEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC-ccccCc
Confidence 99999999999999999999999885321 124678889999999999999999999 999999
Q ss_pred cccceeeCCCCCeEEccCCCcccCCCCC------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCC--CCCCC
Q 011184 183 NAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK--HIPPS 254 (491)
Q Consensus 183 kp~Nill~~~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~--~~~~~ 254 (491)
||+|||++.++.+||+|||+++...... ...++..|+|||++.+..++.++||||||+++|+|+++. .|+..
T Consensus 165 kp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~ 244 (304)
T cd05096 165 ATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGE 244 (304)
T ss_pred chhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCc
Confidence 9999999999999999999987643321 223467899999998888999999999999999999754 34433
Q ss_pred chhhHhhhcccccccc--ccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhc
Q 011184 255 HALDLIRDRNLQMLTD--SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 311 (491)
Q Consensus 255 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~ 311 (491)
................ .......+..++..+.+|+.+||+.||++|||+.+|.+.|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 245 LTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 2221111110000000 00111223456678999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=320.54 Aligned_cols=250 Identities=22% Similarity=0.322 Sum_probs=207.6
Q ss_pred ccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
..+++++++|+|++|.||+|...++..||+|.+.... ...+.+.+|+.+++.++|+||+++++++...+..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA 84 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence 4577889999999999999998778889999986543 235689999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-----c
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----S 211 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~ 211 (491)
+++|.+++.......+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... .
T Consensus 85 ~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 163 (261)
T cd05072 85 KGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN-YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREG 163 (261)
T ss_pred CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhhEEecCCCcEEECCCccceecCCCceeccCC
Confidence 999999997544567889999999999999999999998 9999999999999999999999999987654322 2
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
..++..|+|||.+.+..++.++||||||+++|+|+| |..|+................ ........+.++.+++.
T Consensus 164 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~ 238 (261)
T cd05072 164 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGY-----RMPRMENCPDELYDIMK 238 (261)
T ss_pred CccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC-----CCCCCCCCCHHHHHHHH
Confidence 234567999999988889999999999999999998 887776543322222111111 11122345678999999
Q ss_pred HhccCCCCCCCChhHHHHHhccc
Q 011184 291 RCLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~L~~~ 313 (491)
+||..+|++||+++++.+.|+.+
T Consensus 239 ~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 239 TCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred HHccCCcccCcCHHHHHHHHhcC
Confidence 99999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-42 Score=335.00 Aligned_cols=249 Identities=17% Similarity=0.186 Sum_probs=203.9
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
.+++++.||.|+||.||+|... +++.||||+++... ......+.+|++++..++||||+++++++..++..++|||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 81 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME 81 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence 4567788899999999999954 58999999996432 1234568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC-CCcc
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-GKSY 212 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-~~~~ 212 (491)
|++|++|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..... ....
T Consensus 82 ~~~g~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~ 158 (333)
T cd05600 82 YVPGGDFRTLLNN--LGVLSEDHARFYMAEMFEAVDALHELG-YIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSV 158 (333)
T ss_pred CCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCc
Confidence 9999999999963 457899999999999999999999999 99999999999999999999999999876543 2345
Q ss_pred ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccc--cccccccccCCCCchhHHHHHHHHH
Q 011184 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL--QMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
.||+.|+|||++.+..++.++|||||||++|||++|..||............. ...............++.++.+++.
T Consensus 159 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~ 238 (333)
T cd05600 159 VGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLIT 238 (333)
T ss_pred ccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHH
Confidence 68999999999998899999999999999999999999987554322211110 0000000000111245678999999
Q ss_pred HhccCCCCCCCChhHHHHH
Q 011184 291 RCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~ 309 (491)
+||..+|.+||++++++..
T Consensus 239 ~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 239 KLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred HHhhChhhhcCCHHHHHhC
Confidence 9999999999999999974
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-42 Score=333.72 Aligned_cols=237 Identities=20% Similarity=0.249 Sum_probs=197.3
Q ss_pred cCCCCCccEEEEEEE-CCCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCC
Q 011184 64 EHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 139 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gs 139 (491)
.||+|+||.||++.. .+|..||+|+++... ......+.+|+.+++.++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCc
Confidence 469999999999994 568999999996532 1234567789999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----CCccccC
Q 011184 140 LAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTN 215 (491)
Q Consensus 140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~t 215 (491)
|..++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..... .....||
T Consensus 82 L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt 158 (323)
T cd05595 82 LFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT 158 (323)
T ss_pred HHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCC
Confidence 9988863 457899999999999999999999999 99999999999999999999999999875322 1234689
Q ss_pred CCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccC
Q 011184 216 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 295 (491)
Q Consensus 216 ~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~ 295 (491)
+.|+|||++.+..++.++|||||||++|+|++|+.||............... ...++..+++++.+++.+||+.
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~li~~~L~~ 232 (323)
T cd05595 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAKSLLAGLLKK 232 (323)
T ss_pred cCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHHHHHccC
Confidence 9999999999888999999999999999999999988654332222111111 1124456678999999999999
Q ss_pred CCCCCC-----ChhHHHHH
Q 011184 296 EPRERP-----NPKSLVTA 309 (491)
Q Consensus 296 dp~~Rp-----s~~~il~~ 309 (491)
||.+|| ++.++++.
T Consensus 233 dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 233 DPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CHHHhCCCCCCCHHHHHcC
Confidence 999998 78888763
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-42 Score=357.52 Aligned_cols=253 Identities=24% Similarity=0.382 Sum_probs=206.8
Q ss_pred ccccccCCCCCccEEEEEEECC--CC----EEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 59 ENIVSEHGEKAPNVVYKGKLEN--QR----RIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~~--~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
..+...||+|+||.||.|...+ |. .||||.+++.... ...+|++|+.+|+.++|||||+++|+|......+|+
T Consensus 694 v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~ 773 (1025)
T KOG1095|consen 694 VTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLIL 773 (1025)
T ss_pred eEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEE
Confidence 4556788999999999999643 43 4999999876533 366899999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccC
Q 011184 132 AEYMPNETLAKHLFHWE-----THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 206 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 206 (491)
+|||.||+|..+|++.. ...++....+.++.+||.|+.||+++. +|||||..+|+|++....+||+|||+|+..
T Consensus 774 leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~-fvHRDLAaRNCLL~~~r~VKIaDFGlArDi 852 (1025)
T KOG1095|consen 774 LEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH-FVHRDLAARNCLLDERRVVKIADFGLARDI 852 (1025)
T ss_pred ehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC-CcCcchhhhheeecccCcEEEcccchhHhh
Confidence 99999999999998631 346889999999999999999999997 999999999999999999999999999943
Q ss_pred CCCCcc------ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCC-CCCCCchhhHhhhccccccccccccCCCCc
Q 011184 207 RDGKSY------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK-HIPPSHALDLIRDRNLQMLTDSCLEGQFTD 279 (491)
Q Consensus 207 ~~~~~~------~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (491)
-...-+ .-...|||||.+..+.++.|+|||||||+|||++|.. .|++......+... +.... +...|.
T Consensus 853 y~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~----~~~gg-RL~~P~ 927 (1025)
T KOG1095|consen 853 YDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLD----VLEGG-RLDPPS 927 (1025)
T ss_pred hhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHH----HHhCC-ccCCCC
Confidence 222111 1246799999999999999999999999999999954 55554332222110 11111 223466
Q ss_pred hhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccC
Q 011184 280 DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 280 ~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
.++..+.++|..||+.+|++||++..|++.+..+....
T Consensus 928 ~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 928 YCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred CCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 77889999999999999999999999999888876654
|
|
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-42 Score=339.66 Aligned_cols=252 Identities=22% Similarity=0.337 Sum_probs=200.8
Q ss_pred cccccccCCCCCccEEEEEEEC------CCCEEEEEEeCCCCCCC-hhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWPD-PRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERL 129 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~ 129 (491)
.+++.+.||+|+||.||+++.. ++..||||+++...... ...+.+|+++++.+ +||||++++++|...+..+
T Consensus 39 ~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~ 118 (374)
T cd05106 39 NLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVL 118 (374)
T ss_pred HceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeE
Confidence 4567788899999999998831 23579999997543222 45688999999999 8999999999999999999
Q ss_pred EEEecCCCCCHHHHhcccC-------------------------------------------------------------
Q 011184 130 LVAEYMPNETLAKHLFHWE------------------------------------------------------------- 148 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~------------------------------------------------------------- 148 (491)
+||||+++|+|.+++....
T Consensus 119 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (374)
T cd05106 119 VITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSK 198 (374)
T ss_pred EeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccccc
Confidence 9999999999999885311
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC------ccccC
Q 011184 149 -------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTN 215 (491)
Q Consensus 149 -------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------~~~~t 215 (491)
..++++..+++++.||+.||.|||+++ |+||||||+|||+++++.+||+|||+++...... ...++
T Consensus 199 ~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g-iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~ 277 (374)
T cd05106 199 DEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN-CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLP 277 (374)
T ss_pred chhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCc
Confidence 124788889999999999999999999 9999999999999999999999999987543322 12245
Q ss_pred CCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhcc
Q 011184 216 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 294 (491)
Q Consensus 216 ~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 294 (491)
..|+|||++.+..++.++|||||||++|+|++ |+.||+....... .............+...++++.+++.+||+
T Consensus 278 ~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 353 (374)
T cd05106 278 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK----FYKMVKRGYQMSRPDFAPPEIYSIMKMCWN 353 (374)
T ss_pred cceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH----HHHHHHcccCccCCCCCCHHHHHHHHHHcC
Confidence 67999999988889999999999999999997 8888765432111 001111111122233456799999999999
Q ss_pred CCCCCCCChhHHHHHhcccc
Q 011184 295 YEPRERPNPKSLVTALSPLQ 314 (491)
Q Consensus 295 ~dp~~Rps~~~il~~L~~~~ 314 (491)
.||.+|||+.++++.|+.+.
T Consensus 354 ~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 354 LEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CChhhCcCHHHHHHHHHHHh
Confidence 99999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-42 Score=338.13 Aligned_cols=249 Identities=21% Similarity=0.319 Sum_probs=197.8
Q ss_pred ccccccCCCCCccEEEEEEE------CCCCEEEEEEeCCCCC-CChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEE
Q 011184 59 ENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~l 130 (491)
+++.+.||+|+||.||+|+. .++..||||+++.... ...+.+.+|+.++..+ +||||++++++|..++..++
T Consensus 37 ~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~l 116 (375)
T cd05104 37 LSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLV 116 (375)
T ss_pred eehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCccee
Confidence 55667889999999999973 2356899999975432 2345788999999999 89999999999999999999
Q ss_pred EEecCCCCCHHHHhcccC--------------------------------------------------------------
Q 011184 131 VAEYMPNETLAKHLFHWE-------------------------------------------------------------- 148 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~-------------------------------------------------------------- 148 (491)
||||++||+|.+++....
T Consensus 117 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (375)
T cd05104 117 ITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYID 196 (375)
T ss_pred eehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecc
Confidence 999999999999986421
Q ss_pred -----------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC------c
Q 011184 149 -----------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------S 211 (491)
Q Consensus 149 -----------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------~ 211 (491)
...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++....... .
T Consensus 197 ~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 275 (375)
T cd05104 197 QDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN-CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGN 275 (375)
T ss_pred cccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCchhhEEEECCCcEEEecCccceeccCcccccccCC
Confidence 124778889999999999999999998 9999999999999999999999999987653322 1
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
..++..|+|||.+.+..++.++|||||||++|||++ |..|+........... ..........+...+.++.+|+.
T Consensus 276 ~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~ 351 (375)
T cd05104 276 ARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYK----MIKEGYRMLSPECAPSEMYDIMK 351 (375)
T ss_pred CCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHH----HHHhCccCCCCCCCCHHHHHHHH
Confidence 223567999999998899999999999999999998 7766654321110000 00000111123344578999999
Q ss_pred HhccCCCCCCCChhHHHHHhcc
Q 011184 291 RCLQYEPRERPNPKSLVTALSP 312 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~L~~ 312 (491)
+||+.||++|||+.+|++.|+.
T Consensus 352 ~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 352 SCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred HHccCChhHCcCHHHHHHHHHh
Confidence 9999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-41 Score=316.75 Aligned_cols=246 Identities=22% Similarity=0.338 Sum_probs=201.5
Q ss_pred ccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
+++++++.||+|+||.||++.+.++..+|+|.+.... .....+.+|+.++++++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 3466778899999999999998777889999986443 245678999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-----c
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----S 211 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~ 211 (491)
+|+|.+++... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... .
T Consensus 83 ~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05114 83 NGCLLNYLRQR-QGKLSKDMLLSMCQDVCEGMEYLERNS-FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSG 160 (256)
T ss_pred CCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCC
Confidence 99999998642 346899999999999999999999999 9999999999999999999999999887543221 1
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
..++..|+|||.+.+..++.++||||||+++|+|++ |+.|+................ ....+...+..+.+++.
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~~~li~ 235 (256)
T cd05114 161 AKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGF-----RLYRPKLASMTVYEVMY 235 (256)
T ss_pred CCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-----CCCCCCCCCHHHHHHHH
Confidence 234567999999988889999999999999999999 777775443222211111110 11123334568999999
Q ss_pred HhccCCCCCCCChhHHHHHh
Q 011184 291 RCLQYEPRERPNPKSLVTAL 310 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~L 310 (491)
+||+.+|++|||+.++++.|
T Consensus 236 ~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 236 SCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred HHccCCcccCcCHHHHHHhh
Confidence 99999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=324.73 Aligned_cols=250 Identities=19% Similarity=0.271 Sum_probs=198.1
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
...|.+++.||.|+||+||+|.. .++..||+|+++.... .....+.+|+.+++.++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE 83 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence 45678888999999999999995 4689999999875432 234568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 209 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 209 (491)
|++ ++|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 84 ~~~-~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~ 160 (288)
T cd07871 84 YLD-SDLKQYLDN-CGNLMSMHNVKIFMFQLLRGLSYCHKRK-ILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTY 160 (288)
T ss_pred CCC-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEECcCcceeeccCCCccc
Confidence 998 599988864 2345789999999999999999999999 999999999999999999999999998754322
Q ss_pred CccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccc-----------cc--------
Q 011184 210 KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM-----------LT-------- 269 (491)
Q Consensus 210 ~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~-----------~~-------- 269 (491)
....+++.|+|||++.+ ..++.++|||||||++|+|++|+.||............... +.
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (288)
T cd07871 161 SNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSY 240 (288)
T ss_pred cCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhcc
Confidence 23457889999999875 45899999999999999999999888654322111100000 00
Q ss_pred -ccccc----CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 270 -DSCLE----GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 270 -~~~~~----~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.+... .......+.++.+|+.+||+.||.+|||++++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 241 LFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred ccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000 0011234578999999999999999999999986
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-41 Score=318.34 Aligned_cols=249 Identities=21% Similarity=0.335 Sum_probs=206.4
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
++.+.+.+|.|++|.||+|.. ++++.||+|.+.... .....+.+|+++++.++||||+++++++..++..++||||++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 85 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence 345667789999999999995 458899999987543 345678999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-----c
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----S 211 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~ 211 (491)
+++|.+++.......+++..++.++.|++.||.|||+.+ ++||||||+||++++++.+||+|||++....... .
T Consensus 86 ~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~ 164 (263)
T cd05052 86 YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 164 (263)
T ss_pred CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccCcceEEEcCCCcEEeCCCccccccccceeeccCC
Confidence 999999986544456899999999999999999999998 9999999999999999999999999987654322 1
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
..++..|+|||.+.+..++.++||||||+++|||++ |..|++............. ......+...+..+.+++.
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~ 239 (263)
T cd05052 165 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-----GYRMERPEGCPPKVYELMR 239 (263)
T ss_pred CCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-----CCCCCCCCCCCHHHHHHHH
Confidence 123567999999988889999999999999999998 8877765443332221111 1122344556789999999
Q ss_pred HhccCCCCCCCChhHHHHHhccc
Q 011184 291 RCLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~L~~~ 313 (491)
+||+.||++|||+.++++.|+.+
T Consensus 240 ~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 240 ACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHccCCcccCCCHHHHHHHHHhh
Confidence 99999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-41 Score=322.52 Aligned_cols=250 Identities=25% Similarity=0.364 Sum_probs=203.8
Q ss_pred cccccccCCCCCccEEEEEEECC-C-----CEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLEN-Q-----RRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
++++++.||+|+||.||+|.... + ..||+|.++..... ....+.+|+.++..++||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 85 (283)
T cd05048 6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCM 85 (283)
T ss_pred HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEE
Confidence 46677888999999999998532 2 57999998754322 23568899999999999999999999999899999
Q ss_pred EEecCCCCCHHHHhcccCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeE
Q 011184 131 VAEYMPNETLAKHLFHWET--------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPR 196 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~k 196 (491)
+|||+++++|.+++..... ..+++..++.++.|++.||.|||+.+ ++|+||||+||++++++.++
T Consensus 86 ~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~-i~H~dlkp~Nil~~~~~~~~ 164 (283)
T cd05048 86 LFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH-FVHRDLAARNCLVGEGLTVK 164 (283)
T ss_pred EEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccccceEEEcCCCcEE
Confidence 9999999999999864211 45788899999999999999999998 99999999999999999999
Q ss_pred EccCCCcccCCCC------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccc
Q 011184 197 LSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLT 269 (491)
Q Consensus 197 l~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~ 269 (491)
|+|||++...... ....+++.|+|||.+.+..++.++|||||||++|||++ |..|+.+.....+.......
T Consensus 165 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~-- 242 (283)
T cd05048 165 ISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSR-- 242 (283)
T ss_pred ECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC--
Confidence 9999998754322 12345678999999988889999999999999999998 88887654333222211111
Q ss_pred cccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccc
Q 011184 270 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~ 313 (491)
.....+..++.++.+|+.+||+.||.+||++.+|++.|+.+
T Consensus 243 ---~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 243 ---QLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred ---CcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 11223456778999999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=318.99 Aligned_cols=250 Identities=22% Similarity=0.348 Sum_probs=209.1
Q ss_pred cccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCC
Q 011184 58 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 137 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~ 137 (491)
++.+++.+|.|++|.||+|...++..+++|++..........+..|+.+++.++||||+++++++...+..++||||+++
T Consensus 7 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (261)
T cd05148 7 EFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEK 86 (261)
T ss_pred HHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeeccc
Confidence 35667788999999999999777899999999876655567899999999999999999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC----ccc
Q 011184 138 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SYS 213 (491)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~~~ 213 (491)
++|.+++.......+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++....... ...
T Consensus 87 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~ 165 (261)
T cd05148 87 GSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN-SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKK 165 (261)
T ss_pred CCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccCcceEEEcCCceEEEccccchhhcCCccccccCCC
Confidence 99999997655567899999999999999999999999 9999999999999999999999999987653321 223
Q ss_pred cCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 011184 214 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 292 (491)
Q Consensus 214 ~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 292 (491)
++..|++||.+.+..++.++||||||+++++|++ |+.|+.............. ......+...+..+.+++.+|
T Consensus 166 ~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~ 240 (261)
T cd05148 166 IPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITA-----GYRMPCPAKCPQEIYKIMLEC 240 (261)
T ss_pred CceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHh-----CCcCCCCCCCCHHHHHHHHHH
Confidence 4567999999988889999999999999999998 7777755432222111111 111123445668899999999
Q ss_pred ccCCCCCCCChhHHHHHhccc
Q 011184 293 LQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 293 l~~dp~~Rps~~~il~~L~~~ 313 (491)
|+.||.+|||+.++++.|+.+
T Consensus 241 l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 241 WAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred cCCCchhCcCHHHHHHHHhcC
Confidence 999999999999999999753
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=346.66 Aligned_cols=246 Identities=17% Similarity=0.202 Sum_probs=202.9
Q ss_pred ccccccccCCCCCccEEEEEEE-CC-CCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-EN-QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
..|.+.+.+|+|++|.||++.. .+ +..||+|.+..........+.+|+.+|+.++||||++++++|..++..+|||||
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~ 146 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY 146 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEEC
Confidence 3477888889999999999984 34 678899987554433345678899999999999999999999999999999999
Q ss_pred CCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC---
Q 011184 135 MPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 209 (491)
Q Consensus 135 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 209 (491)
++||+|.+++... ...++++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~ 225 (478)
T PTZ00267 147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK-MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL 225 (478)
T ss_pred CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC-EEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc
Confidence 9999999887532 2356889999999999999999999998 999999999999999999999999999865432
Q ss_pred ---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHH
Q 011184 210 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
....||+.|+|||++.+..++.++|||||||++|+|++|+.|+.......+......... ...+..++.++.
T Consensus 226 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~-----~~~~~~~s~~~~ 300 (478)
T PTZ00267 226 DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKY-----DPFPCPVSSGMK 300 (478)
T ss_pred ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-----CCCCccCCHHHH
Confidence 234589999999999988899999999999999999999998865443322222111111 122345667899
Q ss_pred HHHHHhccCCCCCCCChhHHHH
Q 011184 287 RLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~ 308 (491)
++|.+||+.||+.||++.+++.
T Consensus 301 ~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 301 ALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred HHHHHHhccChhhCcCHHHHHh
Confidence 9999999999999999999875
|
|
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-41 Score=323.81 Aligned_cols=248 Identities=19% Similarity=0.239 Sum_probs=197.5
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCC--CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
.+++++.||+|+||+||+++.. +++.||||+++.... ...+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY 81 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence 3567788899999999999964 588999999875432 2345688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-----
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 209 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----- 209 (491)
++++++..+.. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (287)
T cd07848 82 VEKNMLELLEE--MPNGVPPEKVRSYIYQLIKAIHWCHKND-IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANY 158 (287)
T ss_pred CCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEEeeccCcccccccccccc
Confidence 99877765543 2456899999999999999999999998 999999999999999999999999998765322
Q ss_pred CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhc---cc-----------------cccc
Q 011184 210 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR---NL-----------------QMLT 269 (491)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~---~~-----------------~~~~ 269 (491)
....+++.|+|||++.+..++.++|||||||++|+|++|+.||+.......... .. ....
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07848 159 TEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLR 238 (287)
T ss_pred cccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccc
Confidence 234578999999999988899999999999999999999988865422110000 00 0000
Q ss_pred cccc------cCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 270 DSCL------EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 270 ~~~~------~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.+.. .......++..+.+|+.+||+.||++|||++++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 239 FPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred cCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000 00111235678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-41 Score=328.64 Aligned_cols=238 Identities=20% Similarity=0.273 Sum_probs=196.7
Q ss_pred ccCCCCCccEEEEEEE----CCCCEEEEEEeCCCC----CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 63 SEHGEKAPNVVYKGKL----ENQRRIAVKRFNRMA----WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 63 ~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
+.||+|+||.||++.. .+++.||||+++... ......+..|+.+++.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5679999999999984 357899999986432 12234678899999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----CC
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GK 210 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~ 210 (491)
+++++|.+++.. .+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... ..
T Consensus 82 ~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (323)
T cd05584 82 LSGGELFMHLER--EGIFMEDTACFYLSEISLALEHLHQQG-IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTH 158 (323)
T ss_pred CCCchHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccc
Confidence 999999999863 456888899999999999999999999 99999999999999999999999999874322 12
Q ss_pred ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 211 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
...||+.|+|||++.+..++.++|||||||++|||++|+.||............... ...++...++.+.+++.
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~ 232 (323)
T cd05584 159 TFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKG------KLNLPPYLTPEARDLLK 232 (323)
T ss_pred ccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHH
Confidence 346889999999999888999999999999999999999988654432222111111 11234556788999999
Q ss_pred HhccCCCCCCC-----ChhHHHHH
Q 011184 291 RCLQYEPRERP-----NPKSLVTA 309 (491)
Q Consensus 291 ~cl~~dp~~Rp-----s~~~il~~ 309 (491)
+||+.||++|| ++++++..
T Consensus 233 ~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 233 KLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred HHcccCHhHcCCCCCCCHHHHhcC
Confidence 99999999999 78888763
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-42 Score=325.14 Aligned_cols=245 Identities=27% Similarity=0.468 Sum_probs=193.6
Q ss_pred cccccCCCCCccEEEEEEEC-----CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 60 NIVSEHGEKAPNVVYKGKLE-----NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
++.+.||.|+||.||+|.+. .+..|+||.++..... ..+.+.+|++.+++++||||++++|++...+..++|||
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e 81 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME 81 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence 34567899999999999965 2678999999653322 25689999999999999999999999998888999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 209 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 209 (491)
|+++|+|.+++.......+++..+..|+.||+.||.|||+.+ ++|++|+++||++++++.+||+|||++......
T Consensus 82 ~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~-iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~ 160 (259)
T PF07714_consen 82 YCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN-IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYK 160 (259)
T ss_dssp --TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT-EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccc
Confidence 999999999998654568999999999999999999999998 999999999999999999999999998776221
Q ss_pred --CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHH
Q 011184 210 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 210 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
........|+|||.+.+..++.++||||||+++|||++ |+.|+.......+....... .....+..++..+.
T Consensus 161 ~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 235 (259)
T PF07714_consen 161 NDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQG-----QRLPIPDNCPKDIY 235 (259)
T ss_dssp ESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTT-----EETTSBTTSBHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-----ccceeccchhHHHH
Confidence 12235678999999998889999999999999999999 56666543322222111111 11223445667899
Q ss_pred HHHHHhccCCCCCCCChhHHHHHh
Q 011184 287 RLASRCLQYEPRERPNPKSLVTAL 310 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~L 310 (491)
+++..||+.||++|||+.++++.|
T Consensus 236 ~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 236 SLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HHHHHHT-SSGGGS--HHHHHHHH
T ss_pred HHHHHHcCCChhhCcCHHHHHhcC
Confidence 999999999999999999999876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=323.60 Aligned_cols=248 Identities=16% Similarity=0.215 Sum_probs=201.8
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC---ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
+++++.||+|+||+||++.. .+++.||||++...... ....+.+|+.+++.++||||+++++++..++..++||||
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence 35667779999999999994 46899999998653322 234578899999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC---c
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---S 211 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---~ 211 (491)
+++++|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++....... .
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05605 82 MNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER-IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRG 160 (285)
T ss_pred cCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC-cEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcccc
Confidence 99999998886544457899999999999999999999999 9999999999999999999999999987654332 3
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
..|++.|+|||++.+..++.++||||||+++|+|++|..||.+.............+.. ....++...+..+.+|+.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~ 238 (285)
T cd05605 161 RVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKE--DQEEYSEKFSEAARSICRQ 238 (285)
T ss_pred ccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhh--cccccCcccCHHHHHHHHH
Confidence 46789999999999888999999999999999999999988654322111111111111 1123345567889999999
Q ss_pred hccCCCCCCC-----ChhHHHHH
Q 011184 292 CLQYEPRERP-----NPKSLVTA 309 (491)
Q Consensus 292 cl~~dp~~Rp-----s~~~il~~ 309 (491)
||..||.+|| ++++++..
T Consensus 239 ~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 239 LLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred HccCCHHHhcCCCCCCHHHHhcC
Confidence 9999999999 77788763
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-41 Score=328.96 Aligned_cols=249 Identities=20% Similarity=0.258 Sum_probs=198.7
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
.|++++.||.|+||.||++... ++..+|+|.+...... ....+.+|+++++.++||||++++++|..++..++||||+
T Consensus 6 ~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 85 (333)
T cd06650 6 DFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 85 (333)
T ss_pred hhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecC
Confidence 4677788899999999999954 5888999988754322 2356889999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC--CCccc
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSYS 213 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--~~~~~ 213 (491)
++++|.+++.. .+.+++..+..++.|++.||.|||+.+.++||||||+|||++.++.+||+|||++..... .....
T Consensus 86 ~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~ 163 (333)
T cd06650 86 DGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 163 (333)
T ss_pred CCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccCC
Confidence 99999999863 456889999999999999999999853399999999999999999999999999875432 23446
Q ss_pred cCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcc---cc------------------------
Q 011184 214 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN---LQ------------------------ 266 (491)
Q Consensus 214 ~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~---~~------------------------ 266 (491)
++..|+|||++.+..++.++|||||||++|+|++|+.|+............ ..
T Consensus 164 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (333)
T cd06650 164 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGP 243 (333)
T ss_pred CCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcc
Confidence 889999999999888999999999999999999999887643221111000 00
Q ss_pred -------------ccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 267 -------------MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 267 -------------~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.+.............+.++.+|+.+||+.||++|||+.+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~ 298 (333)
T cd06650 244 DSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV 298 (333)
T ss_pred cccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence 000000000001124578999999999999999999999986
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=314.77 Aligned_cols=249 Identities=22% Similarity=0.334 Sum_probs=205.2
Q ss_pred cccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCC
Q 011184 58 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 137 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~ 137 (491)
.+++++.||+|++|.||+|...++..||||.++... ...+.+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (261)
T cd05068 7 SIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKY 85 (261)
T ss_pred heeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccC
Confidence 356677889999999999997777889999987544 2456799999999999999999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC--ccc--
Q 011184 138 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYS-- 213 (491)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--~~~-- 213 (491)
++|.+++.......+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++....... ...
T Consensus 86 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 164 (261)
T cd05068 86 GSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN-YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGA 164 (261)
T ss_pred CcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCC
Confidence 99999997544456899999999999999999999998 9999999999999999999999999987654321 111
Q ss_pred -cCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 214 -TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 214 -~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
.+..|+|||.+.+..++.++||||||+++++|++ |+.|+................ ....+...+..+.+++.+
T Consensus 165 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~ 239 (261)
T cd05068 165 KFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGY-----RMPCPPGCPKELYDIMLD 239 (261)
T ss_pred cCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-----CCCCCCcCCHHHHHHHHH
Confidence 2357999999998889999999999999999999 887776543322211111111 112234556789999999
Q ss_pred hccCCCCCCCChhHHHHHhccc
Q 011184 292 CLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~~L~~~ 313 (491)
||+.+|.+||++.++++.|+.+
T Consensus 240 ~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 240 CWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred HhhcCcccCCCHHHHHHHHhcC
Confidence 9999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-41 Score=331.94 Aligned_cols=237 Identities=22% Similarity=0.254 Sum_probs=197.3
Q ss_pred cCCCCCccEEEEEEE-CCCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCC
Q 011184 64 EHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 139 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gs 139 (491)
.||+|+||.||++.. .+|+.||+|++.... ......+..|++++..++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCc
Confidence 469999999999994 568999999997532 1234567889999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccccceeeCCCCCeEEccCCCcccCCC----CCcccc
Q 011184 140 LAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYST 214 (491)
Q Consensus 140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 214 (491)
|..++.. ...+++..+..++.||+.||.|||+ ++ |+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~~-ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (325)
T cd05594 82 LFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCG 158 (325)
T ss_pred HHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhcCC-EEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccC
Confidence 9998863 4578999999999999999999997 77 99999999999999999999999999875321 223468
Q ss_pred CCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhcc
Q 011184 215 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 294 (491)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 294 (491)
|+.|+|||++.+..++.++|||||||++|+|++|..||............... ...++...++++.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~~~L~ 232 (325)
T cd05594 159 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------EIRFPRTLSPEAKSLLSGLLK 232 (325)
T ss_pred CcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHHHHHhh
Confidence 99999999999888999999999999999999999988655433222211111 112345567899999999999
Q ss_pred CCCCCCC-----ChhHHHHH
Q 011184 295 YEPRERP-----NPKSLVTA 309 (491)
Q Consensus 295 ~dp~~Rp-----s~~~il~~ 309 (491)
.||++|+ ++.++++.
T Consensus 233 ~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 233 KDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred cCHHHhCCCCCCCHHHHhcC
Confidence 9999996 88998864
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-41 Score=319.96 Aligned_cols=251 Identities=23% Similarity=0.357 Sum_probs=202.4
Q ss_pred CccccccccCCCCCccEEEEEEE-----CCCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-----ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 129 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~ 129 (491)
++.+++++.||+|+||+||+|.. .++..|++|.+...... ....+.+|+++++.++||||+++++++..++..+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 83 (283)
T cd05090 4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC 83 (283)
T ss_pred hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence 34567788899999999999984 24578999999753322 2356889999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHhcccC---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCC
Q 011184 130 LVAEYMPNETLAKHLFHWE---------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 194 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~---------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~ 194 (491)
+||||+++++|.+++.... ...+++.....++.|++.||.|||+++ ++||||||+|||++.++.
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~nili~~~~~ 162 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF-FVHKDLAARNILIGEQLH 162 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC-eehhccccceEEEcCCCc
Confidence 9999999999999985321 134788899999999999999999998 999999999999999999
Q ss_pred eEEccCCCcccCCCC------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccc
Q 011184 195 PRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQM 267 (491)
Q Consensus 195 ~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~ 267 (491)
+||+|||+++..... ....++..|+|||++.+..++.++||||||+++|||++ |..|+.+.....+.......
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~ 242 (283)
T cd05090 163 VKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKR 242 (283)
T ss_pred EEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 999999998754322 22334567999999988889999999999999999999 87777554332222211111
Q ss_pred cccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcc
Q 011184 268 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 312 (491)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~ 312 (491)
. ....+..++..+.+++.+||+.||.+||++.+|++.|..
T Consensus 243 ~-----~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 243 Q-----LLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred C-----cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1 112344566789999999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-41 Score=328.33 Aligned_cols=240 Identities=20% Similarity=0.287 Sum_probs=195.8
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC---CCChhHHHHHHHHH---hccCCCCcceEEeEeecCCeeEEE
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSV---GQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
+++++.||+|+||.||++.. .+++.||||+++... ....+.+.+|+.++ +.++||||+++++++...+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 35677889999999999994 468999999997432 12234566776665 466899999999999999999999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC---
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--- 208 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--- 208 (491)
|||++|++|..++. ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++....
T Consensus 81 ~E~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~ 156 (324)
T cd05589 81 MEYAAGGDLMMHIH---TDVFSEPRAVFYAACVVLGLQYLHENK-IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGD 156 (324)
T ss_pred EcCCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecCCCHHHeEECCCCcEEeCcccCCccCCCCCC
Confidence 99999999998884 357899999999999999999999999 99999999999999999999999999865322
Q ss_pred -CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHH
Q 011184 209 -GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 287 (491)
Q Consensus 209 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (491)
.....|++.|+|||.+.+..++.++|||||||++|+|++|+.||............... ...++..++..+.+
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~ 230 (324)
T cd05589 157 RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVND------EVRYPRFLSREAIS 230 (324)
T ss_pred cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHH
Confidence 23456899999999999888999999999999999999999998765433222211111 11234556788999
Q ss_pred HHHHhccCCCCCCC-----ChhHHHH
Q 011184 288 LASRCLQYEPRERP-----NPKSLVT 308 (491)
Q Consensus 288 li~~cl~~dp~~Rp-----s~~~il~ 308 (491)
++.+||+.||.+|| ++.++++
T Consensus 231 li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 231 IMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred HHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 99999999999999 4666665
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-41 Score=319.81 Aligned_cols=248 Identities=23% Similarity=0.322 Sum_probs=202.8
Q ss_pred cccccccCCCCCccEEEEEEEC------CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
.+.++..+|.|+||.||+|... ++..||||.++..... ....+.+|+++++.++||||+++++++..+...++
T Consensus 6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 85 (280)
T cd05049 6 TIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIM 85 (280)
T ss_pred HhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEE
Confidence 3566778899999999999853 2478999999765433 34679999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhcccC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEc
Q 011184 131 VAEYMPNETLAKHLFHWE------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLS 198 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~ 198 (491)
||||+++++|.+++.... ...+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+
T Consensus 86 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~h~dlkp~nili~~~~~~kl~ 164 (280)
T cd05049 86 VFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH-FVHRDLATRNCLVGYDLVVKIG 164 (280)
T ss_pred EEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-eeccccccceEEEcCCCeEEEC
Confidence 999999999999996421 234788899999999999999999999 9999999999999999999999
Q ss_pred cCCCcccCCCC------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccc
Q 011184 199 TFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDS 271 (491)
Q Consensus 199 Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~ 271 (491)
|||++...... ....+++.|+|||++.+..++.++||||||+++|+|++ |..|+................
T Consensus 165 d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~--- 241 (280)
T cd05049 165 DFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGR--- 241 (280)
T ss_pred CcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC---
Confidence 99998753221 12234678999999999999999999999999999998 988876543332222111111
Q ss_pred cccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhc
Q 011184 272 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 311 (491)
Q Consensus 272 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~ 311 (491)
....+...+..+.+++.+||+.||.+||++.++++.|+
T Consensus 242 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 242 --LLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred --cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 11223456678999999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-41 Score=323.67 Aligned_cols=249 Identities=19% Similarity=0.231 Sum_probs=194.3
Q ss_pred ccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
..|++++.||.|+||.||+|... +++.||||++...... ....+.+|+.+++.++||||+++++++..+...++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY 84 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence 35677888899999999999954 6899999999754322 244678999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----CC
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GK 210 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~ 210 (491)
++ ++|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..... ..
T Consensus 85 ~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 161 (303)
T cd07869 85 VH-TDLCQYMDK-HPGGLHPENVKLFLFQLLRGLSYIHQRY-ILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYS 161 (303)
T ss_pred CC-cCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCC
Confidence 96 788887754 3356889999999999999999999999 99999999999999999999999999865332 12
Q ss_pred ccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhh--Hhhhcc--cc--------------ccccc
Q 011184 211 SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALD--LIRDRN--LQ--------------MLTDS 271 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~--~~~~~~--~~--------------~~~~~ 271 (491)
...+|+.|+|||++.+. .++.++|||||||++|+|++|..||.+.... .+.... .. .....
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (303)
T cd07869 162 NEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPE 241 (303)
T ss_pred CCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccc
Confidence 34578899999998754 4788999999999999999999988653111 000000 00 00000
Q ss_pred cccCCCCc---------hhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 272 CLEGQFTD---------DDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 272 ~~~~~~~~---------~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
......+. ..+..+.+|+.+||+.||.+|||+.++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 242 RFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred cccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 00000000 12357889999999999999999999987
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-42 Score=329.77 Aligned_cols=237 Identities=22% Similarity=0.319 Sum_probs=201.6
Q ss_pred cccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCCCh---hHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCC
Q 011184 62 VSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 137 (491)
Q Consensus 62 i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~ 137 (491)
+.+||.|+||-||-++ ..+...||||++.-...... .+++.|+..|.+++|||++.+.|||..+...|||||||-
T Consensus 31 LrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYCl- 109 (948)
T KOG0577|consen 31 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCL- 109 (948)
T ss_pred HHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHh-
Confidence 4677999999999999 66789999999976554443 468899999999999999999999999999999999996
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCCccccCCC
Q 011184 138 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 217 (491)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t~~ 217 (491)
||-.+++.- ..+++.+..+..|..+.+.||.|||+++ .||||||..|||+++.|.|||+|||.|....+..+++|||.
T Consensus 110 GSAsDlleV-hkKplqEvEIAAi~~gaL~gLaYLHS~~-~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGTPy 187 (948)
T KOG0577|consen 110 GSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-RIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGTPY 187 (948)
T ss_pred ccHHHHHHH-HhccchHHHHHHHHHHHHHHHHHHHHhh-HHhhhccccceEecCCCeeeeccccchhhcCchhcccCCcc
Confidence 788887743 3578999999999999999999999998 99999999999999999999999999999999999999999
Q ss_pred CCCcccccC---CCCCCCccchhHHHHHHHHHhCCCCCCCc-hhh---HhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 218 FTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSH-ALD---LIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 218 y~aPE~~~~---~~~~~~~Dv~slG~vl~elltg~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
|||||++.. +.|+.++||||||+++.||...++|.... ... -+.......+ -...++..+.+|+.
T Consensus 188 wMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtL--------qs~eWS~~F~~Fvd 259 (948)
T KOG0577|consen 188 WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTL--------QSNEWSDYFRNFVD 259 (948)
T ss_pred ccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCC--------CCchhHHHHHHHHH
Confidence 999998853 66999999999999999999999775432 211 1111111111 14467889999999
Q ss_pred HhccCCCCCCCChhHHHHH
Q 011184 291 RCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~ 309 (491)
.||++-|.+|||.++++..
T Consensus 260 ~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 260 SCLQKIPQERPTSEELLKH 278 (948)
T ss_pred HHHhhCcccCCcHHHHhhc
Confidence 9999999999999888753
|
|
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=313.72 Aligned_cols=247 Identities=23% Similarity=0.341 Sum_probs=202.4
Q ss_pred ccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
.++.+++.+|+|++|+||++...++..+|||.+.... .....+.+|+.++++++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 3467788899999999999997777789999987543 245679999999999999999999999999889999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-----c
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----S 211 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~ 211 (491)
+++|.+++... ...+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||.++...... .
T Consensus 83 ~~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05113 83 NGCLLNYLREH-GKRFQPSQLLEMCKDVCEGMAYLESKQ-FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVG 160 (256)
T ss_pred CCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccCcceEEEcCCCCEEECCCccceecCCCceeecCC
Confidence 99999998642 336899999999999999999999998 9999999999999999999999999987543322 1
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
..++..|++||.+.+..++.++||||||+++|+|++ |..|+................. ...+...+..+.+++.
T Consensus 161 ~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~ 235 (256)
T cd05113 161 SKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLR-----LYRPHLASEKVYAIMY 235 (256)
T ss_pred CccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCC-----CCCCCCCCHHHHHHHH
Confidence 234567999999988889999999999999999999 8877654332222221111111 1122334678999999
Q ss_pred HhccCCCCCCCChhHHHHHhc
Q 011184 291 RCLQYEPRERPNPKSLVTALS 311 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~L~ 311 (491)
+||+.+|.+||++.+|+..|+
T Consensus 236 ~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 236 SCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HHcCCCcccCCCHHHHHHhhC
Confidence 999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=335.69 Aligned_cols=247 Identities=18% Similarity=0.183 Sum_probs=197.0
Q ss_pred cccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCC---CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 58 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
.+++++.||+|+||+||+|. ..+++.||||++..... .....+.+|+++++.++||||+++++++.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 35678889999999999999 45688999999965321 224568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC-----
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----- 208 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----- 208 (491)
|++||+|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 82 ~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~aL~~LH~~g-ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~ 158 (381)
T cd05626 82 YIPGGDMMSLLIR--MEVFPEVLARFYIAELTLAIESVHKMG-FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSK 158 (381)
T ss_pred cCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCcHHHEEECCCCCEEEeeCcCCcccccccccc
Confidence 9999999999863 456889999999999999999999999 99999999999999999999999998753210
Q ss_pred ----------------------------------------------CCccccCCCCCCcccccCCCCCCCccchhHHHHH
Q 011184 209 ----------------------------------------------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLL 242 (491)
Q Consensus 209 ----------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl 242 (491)
.....||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il 238 (381)
T cd05626 159 YYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVIL 238 (381)
T ss_pred cccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHH
Confidence 0124689999999999988899999999999999
Q ss_pred HHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHh--ccCCCCCCCChhHHHHH
Q 011184 243 LDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC--LQYEPRERPNPKSLVTA 309 (491)
Q Consensus 243 ~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c--l~~dp~~Rps~~~il~~ 309 (491)
|||++|..||............... ............++++.+|+.+| +..+|..||++.+++..
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 239 FEMLVGQPPFLAPTPTETQLKVINW--ENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred HHHHhCCCCCcCCCHHHHHHHHHcc--ccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 9999999998654332211111110 00001111223567899999984 45566679999999974
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-41 Score=319.99 Aligned_cols=241 Identities=19% Similarity=0.258 Sum_probs=194.5
Q ss_pred CCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC---ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCCH
Q 011184 65 HGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL 140 (491)
Q Consensus 65 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gsL 140 (491)
||.|+||+||++.. .+++.||+|++...... ..+.+..|+.+++.++||||+++.+++..++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 59999999999994 46899999998643222 234577899999999999999999999999999999999999999
Q ss_pred HHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----Ccccc
Q 011184 141 AKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYST 214 (491)
Q Consensus 141 ~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~ 214 (491)
..++... ....+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.++|+|||++...... ....|
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g 159 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR-IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAG 159 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCC
Confidence 9877432 2356899999999999999999999999 999999999999999999999999998754332 23467
Q ss_pred CCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhcc
Q 011184 215 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 294 (491)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 294 (491)
|+.|+|||.+.+..++.++||||||+++|+|++|+.||...............+... ...++...+..+.+++.+||+
T Consensus 160 ~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~ 237 (280)
T cd05608 160 TPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILND--SVTYPDKFSPASKSFCEALLA 237 (280)
T ss_pred CcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhccc--CCCCcccCCHHHHHHHHHHhc
Confidence 899999999999999999999999999999999999886532211111111111111 113345567899999999999
Q ss_pred CCCCCCC-----ChhHHHH
Q 011184 295 YEPRERP-----NPKSLVT 308 (491)
Q Consensus 295 ~dp~~Rp-----s~~~il~ 308 (491)
.||++|| +++++++
T Consensus 238 ~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 238 KDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred CCHHHhcCCCCCCHHHHhc
Confidence 9999999 5667765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-41 Score=332.66 Aligned_cols=246 Identities=17% Similarity=0.178 Sum_probs=195.4
Q ss_pred CCccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 55 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
++.++++++.||.|+||.||++.. .+++.||||++...... ....+.+|+++++.++|+||+++++++..++..++||
T Consensus 72 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 151 (353)
T PLN00034 72 SLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLL 151 (353)
T ss_pred CHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEE
Confidence 355667778899999999999995 46899999998654322 2456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC---
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 209 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 209 (491)
||+++++|.+.. ...+..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 152 e~~~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~ 224 (353)
T PLN00034 152 EFMDGGSLEGTH------IADEQFLADVARQILSGIAYLHRRH-IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDP 224 (353)
T ss_pred ecCCCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCEEEcccccceeccccccc
Confidence 999999986532 3567788899999999999999999 999999999999999999999999998764432
Q ss_pred -CccccCCCCCCcccccC-----CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHH
Q 011184 210 -KSYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 283 (491)
Q Consensus 210 -~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (491)
....||..|+|||++.. ...+.++|||||||++|||++|+.||.......+..... .+. .......+...+.
T Consensus 225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~ 302 (353)
T PLN00034 225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMC-AIC-MSQPPEAPATASR 302 (353)
T ss_pred ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHH-HHh-ccCCCCCCCccCH
Confidence 34568999999998753 224568999999999999999999886322111110000 000 0011223445678
Q ss_pred HHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 284 ELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 284 ~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
++.+||.+||+.||++|||+.++++.
T Consensus 303 ~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 303 EFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 89999999999999999999999984
|
|
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-41 Score=327.39 Aligned_cols=231 Identities=22% Similarity=0.278 Sum_probs=192.7
Q ss_pred cCCCCCccEEEEEEE-CCCCEEEEEEeCCCC---CCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEEecCCCC
Q 011184 64 EHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPNE 138 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~g 138 (491)
.||+|+||+||++.. .+++.||||+++... ......+..|..++..+ +||||+++++++...+..++||||++||
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g 81 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGG 81 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCc
Confidence 469999999999995 458899999986432 22345677888998877 6999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----CCcccc
Q 011184 139 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYST 214 (491)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 214 (491)
+|.+++.. ...+++..+..++.|++.||.|||+++ ++||||||+|||++.++.+||+|||++..... .....|
T Consensus 82 ~L~~~i~~--~~~l~~~~~~~~~~ql~~~L~~lH~~~-ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (320)
T cd05590 82 DLMFHIQK--SRRFDEARARFYAAEITSALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCG 158 (320)
T ss_pred hHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccccccc
Confidence 99998863 457899999999999999999999999 99999999999999999999999999875321 234468
Q ss_pred CCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhcc
Q 011184 215 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 294 (491)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 294 (491)
|+.|+|||++.+..++.++|||||||++|+|++|+.||.......+....... ...++...+.++.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~L~ 232 (320)
T cd05590 159 TPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND------EVVYPTWLSQDAVDILKAFMT 232 (320)
T ss_pred CccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHHHHHcc
Confidence 99999999999888999999999999999999999998765443332222111 112344566789999999999
Q ss_pred CCCCCCCCh
Q 011184 295 YEPRERPNP 303 (491)
Q Consensus 295 ~dp~~Rps~ 303 (491)
.||.+||++
T Consensus 233 ~dP~~R~~~ 241 (320)
T cd05590 233 KNPTMRLGS 241 (320)
T ss_pred cCHHHCCCC
Confidence 999999998
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=313.41 Aligned_cols=248 Identities=24% Similarity=0.347 Sum_probs=204.3
Q ss_pred cccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCC
Q 011184 58 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 137 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~ 137 (491)
.++++++||+|+||.||+|...+++.||+|.+.... .....+.+|+.++++++||||+++++++. .+..+++|||+++
T Consensus 7 ~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~ 84 (260)
T cd05067 7 TLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYMEN 84 (260)
T ss_pred HceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCCC
Confidence 467778899999999999998788999999987544 34568999999999999999999999874 4678999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-----cc
Q 011184 138 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SY 212 (491)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 212 (491)
++|.+++.......+++..+..++.|++.||+|||+.+ ++||||||+||++++++.++|+|||++....... ..
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 163 (260)
T cd05067 85 GSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN-YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGA 163 (260)
T ss_pred CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCC
Confidence 99999987544567899999999999999999999998 9999999999999999999999999987654221 22
Q ss_pred ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
.++..|+|||++.+..++.++||||||+++++|++ |+.|+............... .....+...+.++.+++.+
T Consensus 164 ~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~ 238 (260)
T cd05067 164 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERG-----YRMPRPDNCPEELYELMRL 238 (260)
T ss_pred cccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcC-----CCCCCCCCCCHHHHHHHHH
Confidence 34578999999998889999999999999999999 88887654332221111111 1112234456789999999
Q ss_pred hccCCCCCCCChhHHHHHhccc
Q 011184 292 CLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~~L~~~ 313 (491)
||..+|++||++++++..|+.+
T Consensus 239 ~l~~~p~~Rp~~~~l~~~l~~~ 260 (260)
T cd05067 239 CWKEKPEERPTFEYLRSVLEDF 260 (260)
T ss_pred HccCChhhCCCHHHHHHHhhcC
Confidence 9999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-41 Score=317.80 Aligned_cols=244 Identities=16% Similarity=0.214 Sum_probs=194.7
Q ss_pred CCCCCccEEEEEEE-CCCCEEEEEEeCCCCC---CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCCH
Q 011184 65 HGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL 140 (491)
Q Consensus 65 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gsL 140 (491)
||+|+||.||++.. .+|+.||+|++..... .....+..|++++++++||||+++++++..+...++||||++|++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 59999999999994 4689999999864221 1234566799999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC---ccccCCC
Q 011184 141 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYSTNLA 217 (491)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---~~~~t~~ 217 (491)
.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... ...++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~ 159 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD-IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNG 159 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC-EEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCC
Confidence 98886544556889999999999999999999999 9999999999999999999999999987654332 3457889
Q ss_pred CCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCCC
Q 011184 218 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 297 (491)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp 297 (491)
|+|||++.+..++.++|||||||++|+|++|+.|+..................... .......+.++.+++.+||+.||
T Consensus 160 y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~~P 238 (277)
T cd05607 160 YMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEV-KFEHQNFTEESKDICRLFLAKKP 238 (277)
T ss_pred ccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccc-ccccccCCHHHHHHHHHHhccCH
Confidence 99999999888999999999999999999999887543211111111111111110 01122456789999999999999
Q ss_pred CCCCChhHHHHHh
Q 011184 298 RERPNPKSLVTAL 310 (491)
Q Consensus 298 ~~Rps~~~il~~L 310 (491)
++||++.++++.+
T Consensus 239 ~~R~~~~~~~~~~ 251 (277)
T cd05607 239 EDRLGSREKNDDP 251 (277)
T ss_pred hhCCCCccchhhh
Confidence 9999997766443
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=335.39 Aligned_cols=245 Identities=16% Similarity=0.148 Sum_probs=197.5
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
.+++++.||.|+||+||++.. .+++.||||++.... ......+.+|++++..++||||+++++++..++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIME 81 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEEC
Confidence 356677889999999999995 468999999996432 1234567889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 209 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 209 (491)
|++||+|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.++|+|||++......
T Consensus 82 ~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (364)
T cd05599 82 YLPGGDMMTLLMK--KDTFTEEETRFYIAETILAIDSIHKLG-YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTE 158 (364)
T ss_pred CCCCcHHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEeecccceecccccccc
Confidence 9999999999863 456899999999999999999999999 999999999999999999999999998643211
Q ss_pred --------------------------------------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCC
Q 011184 210 --------------------------------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI 251 (491)
Q Consensus 210 --------------------------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~ 251 (491)
....||+.|+|||++.+..++.++|||||||++|||++|..|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~P 238 (364)
T cd05599 159 FYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPP 238 (364)
T ss_pred ccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCC
Confidence 023589999999999988899999999999999999999998
Q ss_pred CCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCC---hhHHHH
Q 011184 252 PPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN---PKSLVT 308 (491)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps---~~~il~ 308 (491)
|................ ..........+++++.+++.+|+. +|.+|++ +.+++.
T Consensus 239 f~~~~~~~~~~~i~~~~--~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 239 FCSDNPQETYRKIINWK--ETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCCHHHHHHHHHcCC--CccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 86553322211111100 000000111356789999999997 9999997 888876
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-41 Score=308.40 Aligned_cols=251 Identities=20% Similarity=0.254 Sum_probs=200.5
Q ss_pred ccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCC-cceEEeEeecCC------
Q 011184 57 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNR-LTNLLGCCCEGD------ 126 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~n-iv~~~~~~~~~~------ 126 (491)
..+..++++|+|+||+||+|+ ..+|+.||+|++...... ......+|+.+|+.|+|+| ||++++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 345566778999999999999 667999999999765432 3566789999999999999 999999998877
Q ss_pred eeEEEEecCCCCCHHHHhcccCC--CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcc
Q 011184 127 ERLLVAEYMPNETLAKHLFHWET--HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 204 (491)
Q Consensus 127 ~~~lv~e~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 204 (491)
..++||||++ -+|..++..... ..++...+..++.||+.||.|||+++ |+||||||.||||+++|.+||+|||+|+
T Consensus 91 ~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~-IlHRDLKPQNlLi~~~G~lKlaDFGlAr 168 (323)
T KOG0594|consen 91 KLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG-ILHRDLKPQNLLISSSGVLKLADFGLAR 168 (323)
T ss_pred eEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC-eecccCCcceEEECCCCcEeeeccchHH
Confidence 7899999997 899999975432 35777889999999999999999999 9999999999999999999999999998
Q ss_pred cCCCC----CccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccc--------
Q 011184 205 NSRDG----KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS-------- 271 (491)
Q Consensus 205 ~~~~~----~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~-------- 271 (491)
...-. ....+|.-|.|||++.+. .|+...||||+||++.||+++++.|++.........+...+..+
T Consensus 169 a~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v 248 (323)
T KOG0594|consen 169 AFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGV 248 (323)
T ss_pred HhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCc
Confidence 65422 234578889999999987 59999999999999999999999888764322111111111100
Q ss_pred ------c-ccCCC--C-------chhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 272 ------C-LEGQF--T-------DDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 272 ------~-~~~~~--~-------~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
. ..... + +...++..+++.+||+.+|..|.|+..++.+
T Consensus 249 ~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 249 SSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred cccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 0 00000 1 1122488999999999999999999999984
|
|
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=333.93 Aligned_cols=246 Identities=21% Similarity=0.229 Sum_probs=201.9
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
.|.+++.||+|+||+||++... +++.||||+++... ......+..|++++..++||||+++++++.+++..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME 81 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence 3567788899999999999954 68999999996532 1234578899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC---
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--- 210 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 210 (491)
|+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (350)
T cd05573 82 YMPGGDLMNLLIR--KDVFPEETARFYIAELVLALDSVHKLG-FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDRE 158 (350)
T ss_pred CCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEeecCCCCccCcccCccc
Confidence 9999999999974 367899999999999999999999999 9999999999999999999999999987543322
Q ss_pred ------------------------------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHh
Q 011184 211 ------------------------------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI 260 (491)
Q Consensus 211 ------------------------------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~ 260 (491)
...||+.|+|||++.+..++.++|||||||++|+|++|+.||........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~ 238 (350)
T cd05573 159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQET 238 (350)
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHH
Confidence 34578999999999999999999999999999999999999876543222
Q ss_pred hhccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCC-hhHHHHH
Q 011184 261 RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN-PKSLVTA 309 (491)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps-~~~il~~ 309 (491)
........ ..........+++++.++|.+||. ||.+||+ +++++..
T Consensus 239 ~~~i~~~~--~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 239 YNKIINWK--ESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred HHHHhccC--CcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 21111100 000101111257899999999997 9999999 9999974
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-41 Score=324.58 Aligned_cols=236 Identities=20% Similarity=0.280 Sum_probs=193.3
Q ss_pred cCCCCCccEEEEEEE-CCCCEEEEEEeCCCC---CCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEEecCCCC
Q 011184 64 EHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPNE 138 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~g 138 (491)
.||+|+||.||+|.. .+++.||||+++... ....+.+..|..++..+ +||||+++++++..++..++||||++||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg 81 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 469999999999995 458899999997532 22344566777777754 8999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----CCcccc
Q 011184 139 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYST 214 (491)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 214 (491)
+|..++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..... .....|
T Consensus 82 ~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~-ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~g 158 (316)
T cd05592 82 DLMFHIQS--SGRFDEARARFYAAEIICGLQFLHKKG-IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCG 158 (316)
T ss_pred cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccC
Confidence 99998863 457899999999999999999999998 99999999999999999999999999875322 223468
Q ss_pred CCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhcc
Q 011184 215 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 294 (491)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 294 (491)
|+.|+|||++.+..++.++|||||||++|+|++|+.||............... ...++...+.++.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~ll~~~l~ 232 (316)
T cd05592 159 TPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND------RPHFPRWISKEAKDCLSKLFE 232 (316)
T ss_pred CccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHHcc
Confidence 99999999999888999999999999999999999998765433222211111 123345567889999999999
Q ss_pred CCCCCCCChh-HHHH
Q 011184 295 YEPRERPNPK-SLVT 308 (491)
Q Consensus 295 ~dp~~Rps~~-~il~ 308 (491)
.||.+||++. +++.
T Consensus 233 ~~P~~R~~~~~~l~~ 247 (316)
T cd05592 233 RDPTKRLGVDGDIRQ 247 (316)
T ss_pred CCHHHcCCChHHHHc
Confidence 9999999875 5544
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-41 Score=327.00 Aligned_cols=236 Identities=19% Similarity=0.262 Sum_probs=194.9
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCC-CCcceEEeEeecCCeeEEEEe
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRN-NRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H-~niv~~~~~~~~~~~~~lv~e 133 (491)
+++++.||+|+||.||+|.. .+++.||||++.... ....+.+..|++++..+.| ++|+.+++++...+..++|||
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (324)
T cd05587 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 81 (324)
T ss_pred ceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEc
Confidence 56778889999999999995 457899999997532 2235578889999999976 468889999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC----CC
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR----DG 209 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~----~~ 209 (491)
|++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.... ..
T Consensus 82 ~~~~g~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (324)
T cd05587 82 YVNGGDLMYHIQQ--VGKFKEPHAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTT 158 (324)
T ss_pred CCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCce
Confidence 9999999998863 456899999999999999999999999 9999999999999999999999999986432 12
Q ss_pred CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHH
Q 011184 210 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 289 (491)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 289 (491)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||............... ...++...+.++.+++
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li 232 (324)
T cd05587 159 RTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEH------NVSYPKSLSKEAVSIC 232 (324)
T ss_pred eeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHH
Confidence 2346899999999999888999999999999999999999988655433222211111 1234456678899999
Q ss_pred HHhccCCCCCCCCh
Q 011184 290 SRCLQYEPRERPNP 303 (491)
Q Consensus 290 ~~cl~~dp~~Rps~ 303 (491)
.+||..||.+|++.
T Consensus 233 ~~~l~~~P~~R~~~ 246 (324)
T cd05587 233 KGLLTKHPAKRLGC 246 (324)
T ss_pred HHHhhcCHHHcCCC
Confidence 99999999999976
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-43 Score=302.37 Aligned_cols=245 Identities=21% Similarity=0.242 Sum_probs=206.8
Q ss_pred ccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCC--CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 59 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
+.+-.+||+|.|+.|+++. ..+|+.+|+|+++... ..+.+.+.+|+.|.+.|+||||+++...+......|||+|+|
T Consensus 13 y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m 92 (355)
T KOG0033|consen 13 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLV 92 (355)
T ss_pred hhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecc
Confidence 4555677999999999998 4569999999886433 235678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCC---CCeEEccCCCcccCCCCC--
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED---GNPRLSTFGLMKNSRDGK-- 210 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~---~~~kl~Dfgla~~~~~~~-- 210 (491)
.|++|..-+-. .--+++..+-..+.||+.+|.|+|..+ |||||+||.|+|+-.. --+||+|||+|.....+.
T Consensus 93 ~G~dl~~eIV~--R~~ySEa~aSH~~rQiLeal~yCH~n~-IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~ 169 (355)
T KOG0033|consen 93 TGGELFEDIVA--REFYSEADASHCIQQILEALAYCHSNG-IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAW 169 (355)
T ss_pred cchHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcC-ceeccCChhheeeeeccCCCceeecccceEEEeCCcccc
Confidence 99999776643 234678888889999999999999999 9999999999999533 348999999998877543
Q ss_pred -ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHH
Q 011184 211 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 289 (491)
Q Consensus 211 -~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 289 (491)
...|||.|||||++...+++..+|||+.||+||-|+.|.+||+++....+.+.+.....+- .+...+..+++..+|+
T Consensus 170 ~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~--~~~~w~~is~~Ak~Lv 247 (355)
T KOG0033|consen 170 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDY--PSPEWDTVTPEAKSLI 247 (355)
T ss_pred ccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCC--CCcccCcCCHHHHHHH
Confidence 4568999999999999999999999999999999999999999876665555554443332 2234567788999999
Q ss_pred HHhccCCCCCCCChhHHHH
Q 011184 290 SRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~ 308 (491)
++||..||.+|.|+.|.|.
T Consensus 248 rrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 248 RRMLTVNPKKRITADEALK 266 (355)
T ss_pred HHHhccChhhhccHHHHhC
Confidence 9999999999999999987
|
|
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-41 Score=318.80 Aligned_cols=252 Identities=21% Similarity=0.276 Sum_probs=202.7
Q ss_pred CccccccccCCCCCccEEEEEEEC------CCCEEEEEEeCCCCCCC-hhHHHHHHHHHhccCCCCcceEEeEeecCCee
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 128 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~ 128 (491)
++.++++++||.|+||.||+|... .+..||||+++...... ...+.+|+.++..++||||+++++++...+..
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~ 83 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL 83 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce
Confidence 445677889999999999999853 24789999997543222 35688999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHhccc--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCC
Q 011184 129 LLVAEYMPNETLAKHLFHW--------------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 194 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~ 194 (491)
++++||+++++|.+++... ....+++..+..++.|++.||.|||+++ ++||||||+||++++++.
T Consensus 84 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g-i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 84 SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH-VVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC-ccccccchhheEecCCCc
Confidence 9999999999999998521 1235788889999999999999999999 999999999999999999
Q ss_pred eEEccCCCcccCCCCC------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccc
Q 011184 195 PRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQM 267 (491)
Q Consensus 195 ~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~ 267 (491)
+||+|||+++...... ...+++.|+|||.+.++.++.++||||||+++|||++ |..|+.......+.......
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~ 242 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNR 242 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 9999999987543221 2234678999999988889999999999999999998 66666543332222111111
Q ss_pred cccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccc
Q 011184 268 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~ 313 (491)
.....+..++..+.+++.+||+.+|.+||++.+|+..|+.+
T Consensus 243 -----~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~ 283 (283)
T cd05091 243 -----QVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRTW 283 (283)
T ss_pred -----CcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhCC
Confidence 11123456778899999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-41 Score=326.45 Aligned_cols=237 Identities=19% Similarity=0.253 Sum_probs=195.8
Q ss_pred cCCCCCccEEEEEEE-CCCCEEEEEEeCCCC---CCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEEecCCCC
Q 011184 64 EHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPNE 138 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~g 138 (491)
.||+|+||.||+|.. .+++.||||+++... ......+..|.+++..+ +||||+++++++..++..++||||++++
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 81 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGG 81 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCC
Confidence 479999999999995 458899999997532 22345677899999876 7999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----CCcccc
Q 011184 139 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYST 214 (491)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 214 (491)
+|..++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..... .....|
T Consensus 82 ~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (321)
T cd05591 82 DLMFQIQR--SRKFDEPRSRFYAAEVTLALMFLHRHG-VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCG 158 (321)
T ss_pred cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEeecccceecccCCcccccccc
Confidence 99988863 457899999999999999999999999 99999999999999999999999999875322 223458
Q ss_pred CCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhcc
Q 011184 215 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 294 (491)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 294 (491)
|+.|+|||++.+..++.++|||||||++|+|++|+.||............... ...++..++.++.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~ll~~~L~ 232 (321)
T cd05591 159 TPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD------DVLYPVWLSKEAVSILKAFMT 232 (321)
T ss_pred CccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHHhc
Confidence 89999999999888999999999999999999999998765433322221111 112344466889999999999
Q ss_pred CCCCCCC-------ChhHHHHH
Q 011184 295 YEPRERP-------NPKSLVTA 309 (491)
Q Consensus 295 ~dp~~Rp-------s~~~il~~ 309 (491)
.||++|| ++.++++.
T Consensus 233 ~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 233 KNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred cCHHHcCCCCCCCCCHHHHhcC
Confidence 9999999 77777753
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=319.24 Aligned_cols=249 Identities=20% Similarity=0.256 Sum_probs=193.9
Q ss_pred cccccccCCCCCccEEEEEEE-C-CCCEEEEEEeCCCCCC--ChhHHHHHHHHHhcc---CCCCcceEEeEeec-----C
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-E-NQRRIAVKRFNRMAWP--DPRQFLEEARSVGQL---RNNRLTNLLGCCCE-----G 125 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~H~niv~~~~~~~~-----~ 125 (491)
.|+++..||+|+||+||++.. . +++.||||+++..... ....+.+|+.+++.+ +||||++++++|.. .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 356778889999999999985 3 4688999998654322 234567788887766 69999999999852 3
Q ss_pred CeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCccc
Q 011184 126 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 205 (491)
Q Consensus 126 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 205 (491)
...++||||++ ++|.+++.......+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++..
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~-iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 159 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARI 159 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEEcCCCCEEEccccceEe
Confidence 56899999997 79999987544456899999999999999999999999 99999999999999999999999999876
Q ss_pred CCCC---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccccc--------------
Q 011184 206 SRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML-------------- 268 (491)
Q Consensus 206 ~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~-------------- 268 (491)
.... ....+|+.|+|||++.+..++.++|||||||++|||++|++||.+..............
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 239 (290)
T cd07862 160 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 239 (290)
T ss_pred ccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcc
Confidence 4432 23457899999999988889999999999999999999998886543211111110000
Q ss_pred ccccc-------cCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 269 TDSCL-------EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 269 ~~~~~-------~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
..... .......++..+.+++.+||+.||++|||+.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 240 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred cchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 00000 00111245678899999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-41 Score=332.37 Aligned_cols=248 Identities=17% Similarity=0.174 Sum_probs=202.0
Q ss_pred cCCccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeE
Q 011184 54 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 129 (491)
Q Consensus 54 ~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~ 129 (491)
-+...+++++.||+|+||.||++.. .++..||+|++.... ......+.+|+.+++.++||||+++++++..++..+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 3445677888899999999999995 468899999986422 223455788999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 209 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 209 (491)
+||||++||+|.+++. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 120 lv~Ey~~gg~L~~~l~---~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 120 MVMEYMPGGDLVNLMS---NYDIPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EEEcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEcCCCCEEEEeccceeeccCC
Confidence 9999999999999885 346888899999999999999999999 999999999999999999999999998764322
Q ss_pred -----CccccCCCCCCcccccCC----CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCC--
Q 011184 210 -----KSYSTNLAFTPPEYLRTG----RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT-- 278 (491)
Q Consensus 210 -----~~~~~t~~y~aPE~~~~~----~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 278 (491)
....||+.|+|||++.+. .++.++|||||||++|||++|+.||................. ...++
T Consensus 196 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~----~~~~~~~ 271 (370)
T cd05596 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKN----SLTFPDD 271 (370)
T ss_pred CcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCC----cCCCCCc
Confidence 234689999999998653 378899999999999999999999876543322222111110 11122
Q ss_pred chhHHHHHHHHHHhccCCCCC--CCChhHHHHH
Q 011184 279 DDDGTELVRLASRCLQYEPRE--RPNPKSLVTA 309 (491)
Q Consensus 279 ~~~~~~~~~li~~cl~~dp~~--Rps~~~il~~ 309 (491)
...+.++.+++.+||+.+|.+ |||+.+++..
T Consensus 272 ~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 272 IEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred CCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 245689999999999999988 9999999874
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-41 Score=310.74 Aligned_cols=249 Identities=19% Similarity=0.197 Sum_probs=208.0
Q ss_pred CCccccccccCCCCCccEEEEEEECC-CCEEEEEEeCCCCCC---ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEE
Q 011184 55 GFAVENIVSEHGEKAPNVVYKGKLEN-QRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
+++..++++.||.|.-|+||++.+.+ +..+|+|++.+.... ...+.+.|.+||+.++||.++.+|..|+.+...|+
T Consensus 75 ~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl 154 (459)
T KOG0610|consen 75 GLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCL 154 (459)
T ss_pred CHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEE
Confidence 45667889999999999999999654 689999999764432 24467789999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC---
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR--- 207 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~--- 207 (491)
+||||+||+|...++++..+.+++..++.++.+|+.||+|||..| ||+|||||+||||.++|.+.|+||.|+....
T Consensus 155 ~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG-ivYRDLKPENILvredGHIMLsDFDLS~~~~~~P 233 (459)
T KOG0610|consen 155 VMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG-IVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP 233 (459)
T ss_pred EEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc-eeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence 999999999999998888889999999999999999999999999 9999999999999999999999999754210
Q ss_pred -------------------------------C-C-------------------------CccccCCCCCCcccccCCCCC
Q 011184 208 -------------------------------D-G-------------------------KSYSTNLAFTPPEYLRTGRVT 230 (491)
Q Consensus 208 -------------------------------~-~-------------------------~~~~~t~~y~aPE~~~~~~~~ 230 (491)
. . ..++||-.|+|||++.|...+
T Consensus 234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg 313 (459)
T KOG0610|consen 234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG 313 (459)
T ss_pred eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence 0 0 123577889999999999999
Q ss_pred CCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCC----hhHH
Q 011184 231 PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN----PKSL 306 (491)
Q Consensus 231 ~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps----~~~i 306 (491)
.+.|.|+|||++|||+.|..||-+......-...+..-. .... ....+..+.+||+++|.+||++|.. +.||
T Consensus 314 sAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l---~Fp~-~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eI 389 (459)
T KOG0610|consen 314 SAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPL---KFPE-EPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEI 389 (459)
T ss_pred chhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCC---cCCC-CCcchhHHHHHHHHHhccChhhhhccccchHHh
Confidence 999999999999999999999987654433322222211 1111 1256789999999999999999987 7777
Q ss_pred HH
Q 011184 307 VT 308 (491)
Q Consensus 307 l~ 308 (491)
.+
T Consensus 390 K~ 391 (459)
T KOG0610|consen 390 KR 391 (459)
T ss_pred hc
Confidence 65
|
|
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-40 Score=312.08 Aligned_cols=247 Identities=24% Similarity=0.357 Sum_probs=203.0
Q ss_pred cccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCC
Q 011184 58 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 137 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~ 137 (491)
.+++++.+|+|++|.||++...++..||+|.+..... ....+.+|+.++++++|+||+++++++. .+..+++|||+++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~ 84 (260)
T cd05070 7 SLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSK 84 (260)
T ss_pred HhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCC
Confidence 4567788999999999999987788899999876443 4567999999999999999999999875 4568999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-----cc
Q 011184 138 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SY 212 (491)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 212 (491)
++|.+++.......+++..++.++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++....... ..
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 163 (260)
T cd05070 85 GSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN-YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGA 163 (260)
T ss_pred CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCC
Confidence 99999997544456899999999999999999999998 9999999999999999999999999987643321 22
Q ss_pred ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
.++..|+|||.+.+..++.++||||||+++|+|++ |..|+............... .....+...+..+.+|+.+
T Consensus 164 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~ 238 (260)
T cd05070 164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG-----YRMPCPQDCPISLHELMLQ 238 (260)
T ss_pred CCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-----CCCCCCCcCCHHHHHHHHH
Confidence 34567999999988889999999999999999999 77777554322222111111 1122344566789999999
Q ss_pred hccCCCCCCCChhHHHHHhcc
Q 011184 292 CLQYEPRERPNPKSLVTALSP 312 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~~L~~ 312 (491)
||..+|++|||+.++.+.|+.
T Consensus 239 ~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 239 CWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HcccCcccCcCHHHHHHHHhc
Confidence 999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-41 Score=332.06 Aligned_cols=247 Identities=13% Similarity=0.108 Sum_probs=195.3
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
++++++.||+|+||+||++.. .+++.||||++.... ......+.+|+.++..++||||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E 81 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIME 81 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEc
Confidence 356678889999999999984 468999999996432 1223567889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 209 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 209 (491)
|++||+|.+++.. ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~g-ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~ 158 (363)
T cd05628 82 FLPGGDMMTLLMK--KDTLTEEETQFYIAETVLAIDSIHQLG-FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTE 158 (363)
T ss_pred CCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecCCCHHHeEECCCCCEEEeeccCccccccccccc
Confidence 9999999999963 467899999999999999999999999 999999999999999999999999998643210
Q ss_pred -----------------------------------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCC
Q 011184 210 -----------------------------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 254 (491)
Q Consensus 210 -----------------------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~ 254 (491)
....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 159 FYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred ccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence 124689999999999988899999999999999999999999876
Q ss_pred chhhHhhhccccccccccccCCCCchhHHHHHHHHHHhcc--CCCCCCCChhHHHHH
Q 011184 255 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ--YEPRERPNPKSLVTA 309 (491)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~--~dp~~Rps~~~il~~ 309 (491)
..................... ....+.++.+++.+++. .++..||++++|++.
T Consensus 239 ~~~~~~~~~i~~~~~~~~~p~--~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 239 ETPQETYKKVMNWKETLIFPP--EVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCHHHHHHHHHcCcCcccCCC--cCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 543322221111000000010 11245788888888664 233356899999874
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=319.58 Aligned_cols=253 Identities=22% Similarity=0.295 Sum_probs=205.4
Q ss_pred cccccccCCCCCccEEEEEEEC------CCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
++.+...||.|+||.||++... ++..+++|.+........+.+.+|++++++++||||+++++++..++..++|
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 85 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMV 85 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEE
Confidence 4566678899999999999732 3456899998765544456799999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEE
Q 011184 132 AEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRL 197 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl 197 (491)
|||+++++|.+++.... ...+++..++.++.||+.||.|||+++ ++||||||+||+++.++.++|
T Consensus 86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~Nil~~~~~~~~l 164 (291)
T cd05094 86 FEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH-FVHRDLATRNCLVGANLLVKI 164 (291)
T ss_pred EecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccCcceEEEccCCcEEE
Confidence 99999999999986421 134789999999999999999999999 999999999999999999999
Q ss_pred ccCCCcccCCCC------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhcccccccc
Q 011184 198 STFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTD 270 (491)
Q Consensus 198 ~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~ 270 (491)
+|||++...... ....++..|+|||.+.+..++.++||||||+++|+|+| |..|+...............
T Consensus 165 ~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~--- 241 (291)
T cd05094 165 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQG--- 241 (291)
T ss_pred CCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCC---
Confidence 999998754322 22345678999999998889999999999999999999 88776544332221111111
Q ss_pred ccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 271 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 271 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
.....+...+..+.+++.+||+.+|++|||+.++++.|+.+...
T Consensus 242 --~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 242 --RVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred --CCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 11122334567899999999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-41 Score=325.04 Aligned_cols=236 Identities=19% Similarity=0.243 Sum_probs=194.4
Q ss_pred cCCCCCccEEEEEEE-CCCCEEEEEEeCCCC---CCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEEecCCCC
Q 011184 64 EHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPNE 138 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~g 138 (491)
.||+|+||.||++.. .+|..||||+++... ......+..|..++..+ +||||+++++++...+..++||||++||
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g 81 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCC
Confidence 479999999999995 458899999997532 22345677788888765 8999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC----CCCcccc
Q 011184 139 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR----DGKSYST 214 (491)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~----~~~~~~~ 214 (491)
+|..++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.++|+|||+++... ......|
T Consensus 82 ~L~~~i~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (316)
T cd05620 82 DLMFHIQD--KGRFDLYRATFYAAEIVCGLQFLHSKG-IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCG 158 (316)
T ss_pred cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCC
Confidence 99998863 457899999999999999999999999 9999999999999999999999999986432 1234568
Q ss_pred CCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhcc
Q 011184 215 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 294 (491)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 294 (491)
|+.|+|||++.+..++.++|||||||++|+|++|+.||............... ...++...+.++.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~ 232 (316)
T cd05620 159 TPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD------TPHYPRWITKESKDILEKLFE 232 (316)
T ss_pred CcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHHHHHHHcc
Confidence 99999999999889999999999999999999999998765433322211111 122344566789999999999
Q ss_pred CCCCCCCChh-HHHH
Q 011184 295 YEPRERPNPK-SLVT 308 (491)
Q Consensus 295 ~dp~~Rps~~-~il~ 308 (491)
.||.+||++. +++.
T Consensus 233 ~dP~~R~~~~~~~~~ 247 (316)
T cd05620 233 RDPTRRLGVVGNIRG 247 (316)
T ss_pred CCHHHcCCChHHHHc
Confidence 9999999984 5553
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=322.95 Aligned_cols=252 Identities=17% Similarity=0.250 Sum_probs=201.4
Q ss_pred cccccccCCCCCccEEEEEEEC-CCC----EEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQR----RIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
+++++..||+|+||+||+|++. ++. .||||.++.... ...+.+.+|+.+++.++||||++++++|... ..++|
T Consensus 8 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v 86 (316)
T cd05108 8 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLI 86 (316)
T ss_pred hceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cceee
Confidence 4567778899999999999853 343 389999875432 2356788999999999999999999999764 57899
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 210 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 210 (491)
+||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++......
T Consensus 87 ~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 164 (316)
T cd05108 87 TQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEERR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEK 164 (316)
T ss_pred eecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHhcC-eeccccchhheEecCCCcEEEccccccccccCCCc
Confidence 999999999999974 2346889999999999999999999999 9999999999999999999999999998654322
Q ss_pred -----ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHH
Q 011184 211 -----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 284 (491)
Q Consensus 211 -----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (491)
...++..|++||.+.+..++.++||||||+++|||++ |..|+.......+....... .....+..++.+
T Consensus 165 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 239 (316)
T cd05108 165 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG-----ERLPQPPICTID 239 (316)
T ss_pred ceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCC-----CCCCCCCCCCHH
Confidence 1223567999999998899999999999999999998 88777654332221111110 111123345578
Q ss_pred HHHHHHHhccCCCCCCCChhHHHHHhccccccC
Q 011184 285 LVRLASRCLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 285 ~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
+.+++.+||..+|.+||++.+++..|..+....
T Consensus 240 ~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 240 VYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 999999999999999999999999988876643
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-41 Score=332.35 Aligned_cols=253 Identities=21% Similarity=0.291 Sum_probs=201.2
Q ss_pred cccccccCCCCCccEEEEEEECC------CCEEEEEEeCCCCCC-ChhHHHHHHHHHhccC-CCCcceEEeEeecCCeeE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLEN------QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERL 129 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~~ 129 (491)
.+.+++.||.|+||.||+|+... +..||||+++..... ..+.+.+|++++.++. ||||++++++|...+..+
T Consensus 38 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~ 117 (400)
T cd05105 38 GLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIY 117 (400)
T ss_pred ceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceE
Confidence 45667888999999999998421 346999999754322 2457899999999995 999999999999999999
Q ss_pred EEEecCCCCCHHHHhcccC-------------------------------------------------------------
Q 011184 130 LVAEYMPNETLAKHLFHWE------------------------------------------------------------- 148 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~------------------------------------------------------------- 148 (491)
|||||+++|+|.+++....
T Consensus 118 lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (400)
T cd05105 118 IITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEA 197 (400)
T ss_pred EEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhh
Confidence 9999999999999885321
Q ss_pred ---------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCe
Q 011184 149 ---------------------------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP 195 (491)
Q Consensus 149 ---------------------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~ 195 (491)
...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivH~dikp~Nill~~~~~~ 276 (400)
T cd05105 198 SKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN-CVHRDLAARNVLLAQGKIV 276 (400)
T ss_pred hhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChHhEEEeCCCEE
Confidence 124778888999999999999999998 9999999999999999999
Q ss_pred EEccCCCcccCCCCC------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhcccccc
Q 011184 196 RLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQML 268 (491)
Q Consensus 196 kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~ 268 (491)
||+|||+++...... ...++..|+|||.+.+..++.++|||||||++|+|++ |..|++............
T Consensus 277 kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~--- 353 (400)
T cd05105 277 KICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKI--- 353 (400)
T ss_pred EEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHH---
Confidence 999999987543221 2235678999999998889999999999999999997 877776532211110000
Q ss_pred ccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 269 TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
.. ......+..++..+.+++.+||+.||++|||+.+|.+.|+.+.+
T Consensus 354 ~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 354 KS-GYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred hc-CCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 00 01112334566789999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-41 Score=292.23 Aligned_cols=255 Identities=19% Similarity=0.219 Sum_probs=206.7
Q ss_pred ccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCC-----eeEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD-----ERLL 130 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~-----~~~l 130 (491)
..|++.+.+|.|+|+.||++. ..++..+|+|++.-....+.+..++|++..++++||||++++++...+. ..||
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yl 100 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYL 100 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEE
Confidence 467888999999999999999 7789999999998777677889999999999999999999999876543 4899
Q ss_pred EEecCCCCCHHHHhcccC--CCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccccceeeCCCCCeEEccCCCcccCC
Q 011184 131 VAEYMPNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 207 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~-~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 207 (491)
++.|...|||.+.+...+ +..+++.+.+.|+.+|++||++||+.. ++.||||||.|||+++.+.++|.|||.+....
T Consensus 101 l~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~ 180 (302)
T KOG2345|consen 101 LLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAP 180 (302)
T ss_pred EeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccc
Confidence 999999999999987543 346899999999999999999999975 49999999999999999999999999876543
Q ss_pred CC-------------CccccCCCCCCcccccC---CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccc-ccc
Q 011184 208 DG-------------KSYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM-LTD 270 (491)
Q Consensus 208 ~~-------------~~~~~t~~y~aPE~~~~---~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~-~~~ 270 (491)
-. .....|..|.|||.+.- ...+.++|||||||+||.|+.|..||..... ..+.+.. +.+
T Consensus 181 i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~---~GgSlaLAv~n 257 (302)
T KOG2345|consen 181 IQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ---QGGSLALAVQN 257 (302)
T ss_pred eEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh---cCCeEEEeeec
Confidence 21 12246899999999863 4478899999999999999999998853211 1111111 111
Q ss_pred ccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccc
Q 011184 271 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 314 (491)
Q Consensus 271 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~ 314 (491)
....-......++.+.+++.+||+.||.+||++.+++..++.+.
T Consensus 258 ~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 258 AQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred cccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 11110111236789999999999999999999999999887763
|
|
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=328.97 Aligned_cols=234 Identities=20% Similarity=0.229 Sum_probs=194.5
Q ss_pred ccCCCCCccEEEEEEE----CCCCEEEEEEeCCCCC--CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 63 SEHGEKAPNVVYKGKL----ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 63 ~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
+.||+|+||.||++.. .+|+.||+|++..... .....+.+|++++++++||||+++++++..++..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 4679999999999874 3578999999975332 233467789999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----Ccc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSY 212 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 212 (491)
+++|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++...... ...
T Consensus 82 ~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 158 (318)
T cd05582 82 GGDLFTRLSK--EVMFTEEDVKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 158 (318)
T ss_pred CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecc
Confidence 9999999863 456899999999999999999999999 999999999999999999999999998764332 234
Q ss_pred ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 011184 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 292 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 292 (491)
.|++.|+|||.+.+..++.++|||||||++|+|++|+.|+............... ...++...+..+.+++.+|
T Consensus 159 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~~~ 232 (318)
T cd05582 159 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKA------KLGMPQFLSPEAQSLLRAL 232 (318)
T ss_pred cCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHH
Confidence 6889999999999888999999999999999999999988654332222111111 1123455678899999999
Q ss_pred ccCCCCCCCChhH
Q 011184 293 LQYEPRERPNPKS 305 (491)
Q Consensus 293 l~~dp~~Rps~~~ 305 (491)
|+.||.+||++.+
T Consensus 233 l~~~P~~R~~a~~ 245 (318)
T cd05582 233 FKRNPANRLGAGP 245 (318)
T ss_pred hhcCHhHcCCCCC
Confidence 9999999999655
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=314.01 Aligned_cols=254 Identities=18% Similarity=0.234 Sum_probs=204.3
Q ss_pred cccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCCC---hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 58 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
.+++.+.+|.|+||.||+|+ ..+++.||||.++...... ...+.+|+++++.++||||+++++++...+..++|+|
T Consensus 3 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 82 (267)
T cd08228 3 NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLE 82 (267)
T ss_pred ceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEE
Confidence 45667788999999999999 4578999999886432222 3468899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-
Q 011184 134 YMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 210 (491)
Q Consensus 134 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 210 (491)
|+++++|.+++... ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~ 161 (267)
T cd08228 83 LADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred ecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCCHHHEEEcCCCCEEECccccceeccchhH
Confidence 99999999888532 2345788999999999999999999998 9999999999999999999999999987654322
Q ss_pred ---ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHH
Q 011184 211 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 287 (491)
Q Consensus 211 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (491)
...+++.|+|||.+.+..++.++|+||||+++|+|++|+.|+.......... ...+.........+...+..+.+
T Consensus 162 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 239 (267)
T cd08228 162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSL--CQKIEQCDYPPLPTEHYSEKLRE 239 (267)
T ss_pred HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHH--HHHHhcCCCCCCChhhcCHHHHH
Confidence 3457889999999988889999999999999999999998875432211000 00011111111222345678999
Q ss_pred HHHHhccCCCCCCCChhHHHHHhcccc
Q 011184 288 LASRCLQYEPRERPNPKSLVTALSPLQ 314 (491)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~L~~~~ 314 (491)
++.+||..+|++||++.++++.|+.+.
T Consensus 240 li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 240 LVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred HHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 999999999999999999999998763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-41 Score=325.28 Aligned_cols=236 Identities=19% Similarity=0.258 Sum_probs=195.1
Q ss_pred ccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCC---CChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEEe
Q 011184 59 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW---PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e 133 (491)
++++..||+|+||.||++... +++.||||++..... .....+..|..++..+ +|++|+.+++++...+..++|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05616 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVME 81 (323)
T ss_pred ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEc
Confidence 456778899999999999954 578999999875321 2234567788888877 58999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----C
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----G 209 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~ 209 (491)
|+++|+|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... .
T Consensus 82 ~~~~g~L~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~ 158 (323)
T cd05616 82 YVNGGDLMYQIQQ--VGRFKEPHAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTT 158 (323)
T ss_pred CCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEecCCCHHHeEECCCCcEEEccCCCceecCCCCCcc
Confidence 9999999998863 456899999999999999999999998 99999999999999999999999999875321 2
Q ss_pred CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHH
Q 011184 210 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 289 (491)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 289 (491)
....||+.|+|||++.+..++.++|||||||++|||++|+.||............... ...++...+.++.+++
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li 232 (323)
T cd05616 159 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH------NVAYPKSMSKEAVAIC 232 (323)
T ss_pred ccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCcCCHHHHHHH
Confidence 3456899999999999989999999999999999999999998765433222211111 1234556778999999
Q ss_pred HHhccCCCCCCCCh
Q 011184 290 SRCLQYEPRERPNP 303 (491)
Q Consensus 290 ~~cl~~dp~~Rps~ 303 (491)
.+||+.||.+|++.
T Consensus 233 ~~~l~~~p~~R~~~ 246 (323)
T cd05616 233 KGLMTKHPGKRLGC 246 (323)
T ss_pred HHHcccCHHhcCCC
Confidence 99999999999985
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-41 Score=323.07 Aligned_cols=245 Identities=24% Similarity=0.343 Sum_probs=206.5
Q ss_pred ccCCCCCccEEEEEEECC---C--CEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 63 SEHGEKAPNVVYKGKLEN---Q--RRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~~---~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
+.||.|-||.||+|++.+ | -.||||..+.+.. .+.+.|+.|+-+++.++||||++++|+|.+ ...|||||.++
T Consensus 395 r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~WivmEL~~ 473 (974)
T KOG4257|consen 395 RLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVMELAP 473 (974)
T ss_pred HhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEEeccc
Confidence 567999999999999532 3 3589999987543 346789999999999999999999999976 56899999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCCcccc--
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST-- 214 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~-- 214 (491)
-|.|..+|.. +...++......++.||+.+|.|||++. .|||||-..|||+...-.+||+|||+++...+..-+..
T Consensus 474 ~GELr~yLq~-nk~sL~l~tL~ly~~Qi~talaYLeSkr-fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~ 551 (974)
T KOG4257|consen 474 LGELREYLQQ-NKDSLPLRTLTLYCYQICTALAYLESKR-FVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASR 551 (974)
T ss_pred chhHHHHHHh-ccccchHHHHHHHHHHHHHHHHHHHhhc-hhhhhhhhhheeecCcceeeecccchhhhccccchhhccc
Confidence 9999999975 4457888999999999999999999998 99999999999999999999999999998776543322
Q ss_pred ---CCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 215 ---NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 215 ---t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
.+.|||||.+....++.+||||-|||++||++. |..||.+-. .......+....+...|+++|+.+..|+.
T Consensus 552 ~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvk-----NsDVI~~iEnGeRlP~P~nCPp~LYslms 626 (974)
T KOG4257|consen 552 GKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVK-----NSDVIGHIENGERLPCPPNCPPALYSLMS 626 (974)
T ss_pred cccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccc-----ccceEEEecCCCCCCCCCCCChHHHHHHH
Confidence 457999999999999999999999999999987 777876532 22222333333444568889999999999
Q ss_pred HhccCCCCCCCChhHHHHHhccccc
Q 011184 291 RCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
+||..||.+||++.+|...|+.+..
T Consensus 627 kcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 627 KCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred HHhccCcccCCcHHHHHHHHHHHHH
Confidence 9999999999999999998877655
|
|
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-40 Score=311.32 Aligned_cols=249 Identities=24% Similarity=0.329 Sum_probs=202.3
Q ss_pred cccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCC
Q 011184 58 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 137 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~ 137 (491)
.++++++||+|++|.||+|...++..||+|+++... ...+.+.+|+++++.++||||+++++++. .+..++||||+++
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~ 84 (262)
T cd05071 7 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSK 84 (262)
T ss_pred HeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCCC
Confidence 467788899999999999997666789999987533 24567899999999999999999999875 4568999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-----cc
Q 011184 138 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SY 212 (491)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 212 (491)
++|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||.+....... ..
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~ 163 (262)
T cd05071 85 GSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 163 (262)
T ss_pred CcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccCcccEEEcCCCcEEeccCCceeeccccccccccCC
Confidence 99999997533456889999999999999999999998 9999999999999999999999999987543322 22
Q ss_pred ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
.++..|+|||++.+..++.++||||||+++|+|++ |..|+............... .....+...+..+.+++.+
T Consensus 164 ~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~ 238 (262)
T cd05071 164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-----YRMPCPPECPESLHDLMCQ 238 (262)
T ss_pred cccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcC-----CCCCCccccCHHHHHHHHH
Confidence 34567999999988889999999999999999999 66666544322221111111 0112234566789999999
Q ss_pred hccCCCCCCCChhHHHHHhcccc
Q 011184 292 CLQYEPRERPNPKSLVTALSPLQ 314 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~~L~~~~ 314 (491)
||+.+|.+||++.++++.|+.+.
T Consensus 239 ~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 239 CWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred HccCCcccCCCHHHHHHHHHHhc
Confidence 99999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=313.71 Aligned_cols=250 Identities=18% Similarity=0.188 Sum_probs=201.0
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
..+++++..||+|+||.||+|+. .+++.||+|++..........+.+|+.++++++||||+++++++..++..++||||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 34677888999999999999994 56889999999755444556788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----C
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 210 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 210 (491)
+++++|.+++.. ..++++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++...... .
T Consensus 88 ~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (267)
T cd06646 88 CGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLAYLHSKG-KMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRK 164 (267)
T ss_pred CCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCCEEECcCccceeecccccccC
Confidence 999999998863 457899999999999999999999998 999999999999999999999999998754322 2
Q ss_pred ccccCCCCCCccccc---CCCCCCCccchhHHHHHHHHHhCCCCCCCchhhH-hhhccccccccccccCCCCchhHHHHH
Q 011184 211 SYSTNLAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-IRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~---~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
...++..|+|||.+. ...++.++||||||+++|+|++|+.|+....... ...........+. .......+..+.
T Consensus 165 ~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 242 (267)
T cd06646 165 SFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPK--LKDKTKWSSTFH 242 (267)
T ss_pred ccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCC--CccccccCHHHH
Confidence 345788999999884 3447889999999999999999998764322111 0000000001010 011234567899
Q ss_pred HHHHHhccCCCCCCCChhHHHHHh
Q 011184 287 RLASRCLQYEPRERPNPKSLVTAL 310 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~L 310 (491)
+++.+||..+|++|||++++++.|
T Consensus 243 ~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 243 NFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred HHHHHHhhCChhhCcCHHHHhcCC
Confidence 999999999999999999998754
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=323.04 Aligned_cols=236 Identities=20% Similarity=0.262 Sum_probs=193.5
Q ss_pred cCCCCCccEEEEEEEC-CCCEEEEEEeCCCC---CCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEEecCCCC
Q 011184 64 EHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPNE 138 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~g 138 (491)
.||+|+||+||+|... +++.||||+++... ......+..|..++..+ +||||+++++++...+..++||||++||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g 81 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence 5799999999999954 58899999997532 22345577788888765 8999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----CCcccc
Q 011184 139 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYST 214 (491)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 214 (491)
+|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++..... .....|
T Consensus 82 ~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~LH~~~-ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (316)
T cd05619 82 DLMFHIQS--CHKFDLPRATFYAAEIICGLQFLHSKG-IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCG 158 (316)
T ss_pred cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecC
Confidence 99999863 356889999999999999999999998 99999999999999999999999999875321 234468
Q ss_pred CCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhcc
Q 011184 215 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 294 (491)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 294 (491)
|+.|+|||++.+..++.++|||||||++|+|++|..||............... ...++...+.++.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l~ 232 (316)
T cd05619 159 TPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD------NPCYPRWLTREAKDILVKLFV 232 (316)
T ss_pred CccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCccCCHHHHHHHHHHhc
Confidence 99999999999888999999999999999999999988654332222111100 112344566789999999999
Q ss_pred CCCCCCCChh-HHHH
Q 011184 295 YEPRERPNPK-SLVT 308 (491)
Q Consensus 295 ~dp~~Rps~~-~il~ 308 (491)
.||++||++. +++.
T Consensus 233 ~~P~~R~~~~~~l~~ 247 (316)
T cd05619 233 REPERRLGVKGDIRQ 247 (316)
T ss_pred cCHhhcCCChHHHHc
Confidence 9999999997 5544
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=330.02 Aligned_cols=241 Identities=20% Similarity=0.300 Sum_probs=203.1
Q ss_pred ccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCCHH
Q 011184 63 SEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLA 141 (491)
Q Consensus 63 ~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 141 (491)
-+||+|.+|+||.|+ .++...+|||.+........+-+..|+.+.++|+|.|||+++|.|.+++.+-|.||-+|||||.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 367999999999999 5667889999998766666777999999999999999999999999999999999999999999
Q ss_pred HHhcccCCCCC--CHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeC-CCCCeEEccCCCcccCC----CCCcccc
Q 011184 142 KHLFHWETHPM--KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMKNSR----DGKSYST 214 (491)
Q Consensus 142 ~~l~~~~~~~l--~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~----~~~~~~~ 214 (491)
++|+.. =+++ .+.+.-.+.+||+.||.|||+.. |||||||-+||||+ -.|.+||+|||-++... -..++.|
T Consensus 661 sLLrsk-WGPlKDNEstm~fYtkQILeGLkYLHen~-IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTG 738 (1226)
T KOG4279|consen 661 SLLRSK-WGPLKDNESTMNFYTKQILEGLKYLHENK-IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTG 738 (1226)
T ss_pred HHHHhc-cCCCccchhHHHHHHHHHHHHhhhhhhcc-eeeccccCCcEEEeeccceEEecccccchhhccCCcccccccc
Confidence 999752 2455 67888889999999999999997 99999999999996 67999999999876543 3457889
Q ss_pred CCCCCCcccccCCC--CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 011184 215 NLAFTPPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 292 (491)
Q Consensus 215 t~~y~aPE~~~~~~--~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 292 (491)
|.-|||||++..++ |+.++|||||||++.||.||++||..........-.... -...+.+|..++.+...+|.+|
T Consensus 739 TLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGm---yKvHP~iPeelsaeak~Filrc 815 (1226)
T KOG4279|consen 739 TLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGM---YKVHPPIPEELSAEAKNFILRC 815 (1226)
T ss_pred chhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcc---eecCCCCcHHHHHHHHHHHHHH
Confidence 99999999998765 889999999999999999999988543222111111111 1123456888999999999999
Q ss_pred ccCCCCCCCChhHHHH
Q 011184 293 LQYEPRERPNPKSLVT 308 (491)
Q Consensus 293 l~~dp~~Rps~~~il~ 308 (491)
+.+||.+||++.+++.
T Consensus 816 Fepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 816 FEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred cCCCcccCccHHHhcc
Confidence 9999999999999996
|
|
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=318.34 Aligned_cols=253 Identities=23% Similarity=0.301 Sum_probs=203.9
Q ss_pred cccccccCCCCCccEEEEEEE------CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
.+.+...+|.|+||.||++.. .++..+|+|.+..........+.+|++++++++||||+++++++...+..++|
T Consensus 6 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 85 (288)
T cd05093 6 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMV 85 (288)
T ss_pred HeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 345667779999999999984 22456899998765444456799999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccC-----------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccC
Q 011184 132 AEYMPNETLAKHLFHWE-----------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 200 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 200 (491)
|||+++++|.+++.... ...+++..++.++.|++.||.|||+++ ++||||||+||++++++.++|+||
T Consensus 86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~-i~H~dlkp~Nili~~~~~~kl~df 164 (288)
T cd05093 86 FEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVGENLLVKIGDF 164 (288)
T ss_pred EEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccCcceEEEccCCcEEeccC
Confidence 99999999999986321 134899999999999999999999999 999999999999999999999999
Q ss_pred CCcccCCCC------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccc
Q 011184 201 GLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCL 273 (491)
Q Consensus 201 gla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (491)
|++...... ....++..|+|||++.+..++.++||||||+++++|++ |..|+................
T Consensus 165 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~----- 239 (288)
T cd05093 165 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGR----- 239 (288)
T ss_pred CccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-----
Confidence 998754322 12234678999999998889999999999999999999 777765443322211111111
Q ss_pred cCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 274 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 274 ~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
....+...+.++.+|+.+||+.||.+|||+.+++..|+.+...
T Consensus 240 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 240 VLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 1112334567899999999999999999999999999888653
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-41 Score=323.84 Aligned_cols=236 Identities=19% Similarity=0.273 Sum_probs=196.1
Q ss_pred cCCCCCccEEEEEEEC-CCCEEEEEEeCCCC---CCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEEecCCCC
Q 011184 64 EHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPNE 138 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~g 138 (491)
.||.|+||+||++... +++.||||+++... ......+.+|..++..+ +||||+++++++...+..++||||++|+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGG 81 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 4699999999999954 58899999997532 22345677899999888 7999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----CCcccc
Q 011184 139 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYST 214 (491)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 214 (491)
+|..++.. ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++..... .....|
T Consensus 82 ~L~~~~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (318)
T cd05570 82 DLMFHIQR--SGRFDEPRARFYAAEIVLGLQFLHERG-IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCG 158 (318)
T ss_pred CHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceec
Confidence 99998863 457999999999999999999999999 99999999999999999999999999864321 123458
Q ss_pred CCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhcc
Q 011184 215 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 294 (491)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 294 (491)
++.|+|||++.+..++.++|||||||++|+|++|+.||............... ...++..++..+.+|+.+||+
T Consensus 159 ~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l~ 232 (318)
T cd05570 159 TPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED------EVRYPRWLSKEAKSILKSFLT 232 (318)
T ss_pred CccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC------CCCCCCcCCHHHHHHHHHHcc
Confidence 89999999999989999999999999999999999998654433222211111 112344567889999999999
Q ss_pred CCCCCCCCh-----hHHHH
Q 011184 295 YEPRERPNP-----KSLVT 308 (491)
Q Consensus 295 ~dp~~Rps~-----~~il~ 308 (491)
.||.+||++ .+++.
T Consensus 233 ~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 233 KNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred CCHHHcCCCCCCCHHHHhc
Confidence 999999999 88776
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=331.56 Aligned_cols=244 Identities=17% Similarity=0.163 Sum_probs=195.8
Q ss_pred cccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 58 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
.|.+++.||.|+||+||++. ..+++.||||++.... ......+.+|++++..++||||+++++++.+++..|+|||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E 81 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME 81 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence 35667888999999999999 4568999999986432 1224568889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 209 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 209 (491)
|++||+|.+++.. ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 158 (377)
T cd05629 82 FLPGGDLMTMLIK--YDTFSEDVTRFYMAECVLAIEAVHKLG-FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSA 158 (377)
T ss_pred CCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 9999999999863 457889999999999999999999999 999999999999999999999999998532110
Q ss_pred -----------------------------------------------CccccCCCCCCcccccCCCCCCCccchhHHHHH
Q 011184 210 -----------------------------------------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLL 242 (491)
Q Consensus 210 -----------------------------------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl 242 (491)
....||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 238 (377)
T cd05629 159 YYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM 238 (377)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhh
Confidence 023588999999999988899999999999999
Q ss_pred HHHHhCCCCCCCchhhHhhhccccccccccccCCCCc--hhHHHHHHHHHHhccCCCCCC---CChhHHHHH
Q 011184 243 LDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD--DDGTELVRLASRCLQYEPRER---PNPKSLVTA 309 (491)
Q Consensus 243 ~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~cl~~dp~~R---ps~~~il~~ 309 (491)
|||++|..||............... .. ...++. ..+.++.+++.+||. +|.+| +++.+++..
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~-~~---~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 239 FECLIGWPPFCSENSHETYRKIINW-RE---TLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred hhhhcCCCCCCCCCHHHHHHHHHcc-CC---ccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 9999999988654332211111110 00 011111 356789999999998 67765 599998874
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-41 Score=327.49 Aligned_cols=246 Identities=18% Similarity=0.231 Sum_probs=196.7
Q ss_pred ccccccCCCCCccEEEEEEE----CCCCEEEEEEeCCCC----CCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeE
Q 011184 59 ENIVSEHGEKAPNVVYKGKL----ENQRRIAVKRFNRMA----WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERL 129 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~ 129 (491)
+++++.||+|+||+||++.. .+++.||+|++.... ....+.+..|+.++..+ +||||+++++++..++..+
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH 81 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence 56778889999999999884 357899999986422 12245678899999999 5999999999999999999
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 209 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 209 (491)
+||||+++|+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 82 lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~ 158 (332)
T cd05614 82 LILDYVSGGEMFTHLYQ--RDNFSEDEVRFYSGEIILALEHLHKLG-IVYRDIKLENILLDSEGHVVLTDFGLSKEFLSE 158 (332)
T ss_pred EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cEecCCCHHHeEECCCCCEEEeeCcCCcccccc
Confidence 99999999999999863 456899999999999999999999999 999999999999999999999999998754221
Q ss_pred -----CccccCCCCCCcccccCCC-CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHH
Q 011184 210 -----KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 283 (491)
Q Consensus 210 -----~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (491)
....||+.|+|||++.+.. ++.++|||||||++|||++|..||...............+.. ....++...+.
T Consensus 159 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 236 (332)
T cd05614 159 EKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK--CDPPFPSFIGP 236 (332)
T ss_pred CCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc--CCCCCCCCCCH
Confidence 2346899999999998654 788999999999999999999988532211100000011111 11233455678
Q ss_pred HHHHHHHHhccCCCCCCC-----ChhHHHHH
Q 011184 284 ELVRLASRCLQYEPRERP-----NPKSLVTA 309 (491)
Q Consensus 284 ~~~~li~~cl~~dp~~Rp-----s~~~il~~ 309 (491)
.+.+++.+||+.||++|| +++++++.
T Consensus 237 ~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 237 EAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred HHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 899999999999999999 66777763
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-41 Score=334.15 Aligned_cols=246 Identities=17% Similarity=0.188 Sum_probs=198.5
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
.|++++.||+|+||+||++.. .+++.||||++.... ......+.+|++++..++||||+++++.+..++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 467888999999999999994 568999999986422 1234568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC-----
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----- 208 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----- 208 (491)
|++||+|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 82 ~~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~ 158 (376)
T cd05598 82 YIPGGDMMSLLIR--LGIFEEDLARFYIAELTCAIESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (376)
T ss_pred CCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccc
Confidence 9999999999963 456888999999999999999999999 99999999999999999999999998742210
Q ss_pred ------------------------------------------CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHH
Q 011184 209 ------------------------------------------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 246 (491)
Q Consensus 209 ------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ell 246 (491)
.....||+.|+|||++.+..++.++|||||||++|||+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell 238 (376)
T cd05598 159 YYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 238 (376)
T ss_pred ccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehh
Confidence 01246889999999999888999999999999999999
Q ss_pred hCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCC---ChhHHHHH
Q 011184 247 SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP---NPKSLVTA 309 (491)
Q Consensus 247 tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp---s~~~il~~ 309 (491)
+|+.||............... ...........+++++.+++.+|+ .+|.+|+ ++.+++..
T Consensus 239 ~G~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 239 VGQPPFLADTPAETQLKVINW--ETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred hCCCCCCCCCHHHHHHHHhcc--CccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 999998765432221111110 000111112345678899999977 5999999 88998874
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=318.09 Aligned_cols=248 Identities=20% Similarity=0.264 Sum_probs=205.6
Q ss_pred cCCccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 54 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 54 ~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
+-...+.++..+|.|++|.||++.. .+++.|++|.+..........+.+|+.+++.++||||+++++.+..+...++||
T Consensus 17 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~ 96 (296)
T cd06654 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (296)
T ss_pred CcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEee
Confidence 3345677788899999999999994 568999999997665555678899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC---
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 209 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 209 (491)
||+++++|.+++. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++......
T Consensus 97 e~~~~~~L~~~~~---~~~~~~~~~~~i~~ql~~aL~~LH~~g-i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~ 172 (296)
T cd06654 97 EYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172 (296)
T ss_pred cccCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCEEECccccchhccccccc
Confidence 9999999999984 346889999999999999999999999 999999999999999999999999987754322
Q ss_pred -CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHH
Q 011184 210 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 288 (491)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (491)
....+++.|+|||.+.+..++.++|||||||++|+|++|+.||........... ...........+...+..+.++
T Consensus 173 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~l 249 (296)
T cd06654 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL---IATNGTPELQNPEKLSAIFRDF 249 (296)
T ss_pred cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHH---HhcCCCCCCCCccccCHHHHHH
Confidence 234678899999999988899999999999999999999998865432111100 0011111112244566789999
Q ss_pred HHHhccCCCCCCCChhHHHH
Q 011184 289 ASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~ 308 (491)
+.+||..+|++||++.+++.
T Consensus 250 i~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 250 LNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred HHHHCcCCcccCcCHHHHhh
Confidence 99999999999999999997
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-40 Score=310.16 Aligned_cols=249 Identities=25% Similarity=0.356 Sum_probs=203.0
Q ss_pred CccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEee-cCCeeEEEEec
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCC-EGDERLLVAEY 134 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~-~~~~~~lv~e~ 134 (491)
...+.+.+.+|+|+||.||++... |..||+|.++... ..+.+.+|+.++++++|+||+++++++. .++..++||||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence 345677788899999999999874 7789999986433 3567899999999999999999999764 45678999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-Cccc
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYS 213 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~ 213 (491)
+++++|.+++.......+++..++.++.|++.||.|||+++ ++||||||+||++++++.+||+|||++...... ....
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 160 (256)
T cd05082 82 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 160 (256)
T ss_pred CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeccccchheEEEcCCCcEEecCCccceeccccCCCCc
Confidence 99999999997544446889999999999999999999998 999999999999999999999999998764332 2233
Q ss_pred cCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 011184 214 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 292 (491)
Q Consensus 214 ~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 292 (491)
++..|+|||++.+..++.++||||||+++|+|++ |+.|+............... .....+..+++.+.+++.+|
T Consensus 161 ~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~ 235 (256)
T cd05082 161 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-----YKMDAPDGCPPVVYDVMKQC 235 (256)
T ss_pred cceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC-----CCCCCCCCCCHHHHHHHHHH
Confidence 4568999999988889999999999999999998 88777654332222111111 11223445678999999999
Q ss_pred ccCCCCCCCChhHHHHHhccc
Q 011184 293 LQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 293 l~~dp~~Rps~~~il~~L~~~ 313 (491)
|+.+|++|||+.++++.|+.+
T Consensus 236 l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 236 WHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred hcCChhhCcCHHHHHHHHhcC
Confidence 999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-40 Score=309.58 Aligned_cols=241 Identities=27% Similarity=0.390 Sum_probs=195.2
Q ss_pred cCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCCHH
Q 011184 64 EHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLA 141 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 141 (491)
.||+|+||.||+|+. .+++.||+|.+...... ....+.+|+++++.++||||+++++++...+..++||||+++++|.
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 81 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL 81 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHH
Confidence 579999999999995 46899999988643322 2456899999999999999999999999999999999999999999
Q ss_pred HHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCCc------cccC
Q 011184 142 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS------YSTN 215 (491)
Q Consensus 142 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~------~~~t 215 (491)
+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++........ ...+
T Consensus 82 ~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 159 (252)
T cd05084 82 TFLRT-EGPRLKVKELIQMVENAAAGMEYLESKH-CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIP 159 (252)
T ss_pred HHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCc
Confidence 99864 2346889999999999999999999998 99999999999999999999999999875433211 1123
Q ss_pred CCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhcc
Q 011184 216 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 294 (491)
Q Consensus 216 ~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 294 (491)
..|+|||.+.++.++.++||||||+++|+|++ |..|+.............. ......+...+..+.+++.+||+
T Consensus 160 ~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~ 234 (252)
T cd05084 160 VKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQ-----GVRLPCPELCPDAVYRLMERCWE 234 (252)
T ss_pred eeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHc-----CCCCCCcccCCHHHHHHHHHHcC
Confidence 56999999998889999999999999999998 6666543322211111111 11122344556789999999999
Q ss_pred CCCCCCCChhHHHHHhc
Q 011184 295 YEPRERPNPKSLVTALS 311 (491)
Q Consensus 295 ~dp~~Rps~~~il~~L~ 311 (491)
.+|++|||+.++++.|+
T Consensus 235 ~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 235 YDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CChhhCcCHHHHHHHHh
Confidence 99999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=325.10 Aligned_cols=240 Identities=17% Similarity=0.258 Sum_probs=194.0
Q ss_pred cCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC---CChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEEecCCCC
Q 011184 64 EHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPNE 138 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~g 138 (491)
.||+|+||.||++.. .+++.||||+++.... .....+.+|..++..+ +||||+++++++...+..++||||++||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g 81 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGG 81 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 469999999999995 4688999999975322 2245688899999998 7999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC----CCCcccc
Q 011184 139 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR----DGKSYST 214 (491)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~----~~~~~~~ 214 (491)
+|.+++.. .+.+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++... ......|
T Consensus 82 ~L~~~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (329)
T cd05588 82 DLMFHMQR--QRKLPEEHARFYSAEISLALNFLHERG-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCG 158 (329)
T ss_pred CHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccC
Confidence 99988863 467999999999999999999999999 9999999999999999999999999987422 1234568
Q ss_pred CCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhH-----hhhccccccccccccCCCCchhHHHHHHHH
Q 011184 215 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQMLTDSCLEGQFTDDDGTELVRLA 289 (491)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 289 (491)
|+.|+|||++.+..++.++|||||||++|+|++|+.||....... ........+... ...++..++..+.+++
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~li 236 (329)
T cd05588 159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEK--QIRIPRSLSVKASSVL 236 (329)
T ss_pred CccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcC--CCCCCCCCCHHHHHHH
Confidence 999999999998889999999999999999999999885321100 000000011111 1124556678899999
Q ss_pred HHhccCCCCCCCC------hhHHHH
Q 011184 290 SRCLQYEPRERPN------PKSLVT 308 (491)
Q Consensus 290 ~~cl~~dp~~Rps------~~~il~ 308 (491)
.+||+.||.+||+ ++++++
T Consensus 237 ~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 237 KGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred HHHhccCHHHcCCCCCCCCHHHHhc
Confidence 9999999999997 566665
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-40 Score=309.87 Aligned_cols=245 Identities=26% Similarity=0.355 Sum_probs=200.1
Q ss_pred cccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCC
Q 011184 58 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 137 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~ 137 (491)
++.+.+.+|+|++|.||++...++..+|+|.+.... .....+.+|+++++.++||||+++++++...+..++||||++|
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 355667889999999999998777789999986543 2345788999999999999999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCCc-----c
Q 011184 138 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-----Y 212 (491)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-----~ 212 (491)
++|.+++... ...+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++...+... .
T Consensus 84 ~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 161 (256)
T cd05059 84 GCLLNYLRER-KGKLGTEWLLDMCSDVCEAMEYLESNG-FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGT 161 (256)
T ss_pred CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC-cccccccHhhEEECCCCcEEECCcccceecccccccccCCC
Confidence 9999998642 346899999999999999999999999 99999999999999999999999999876443221 1
Q ss_pred ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
.++..|+|||.+.+..++.++||||||+++|+|++ |..|+............... .....+...+..+.+++.+
T Consensus 162 ~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~ 236 (256)
T cd05059 162 KFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAG-----YRLYRPKLAPTEVYTIMYS 236 (256)
T ss_pred CCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcC-----CcCCCCCCCCHHHHHHHHH
Confidence 22357999999998889999999999999999999 67666443222211111111 1112334567899999999
Q ss_pred hccCCCCCCCChhHHHHHh
Q 011184 292 CLQYEPRERPNPKSLVTAL 310 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~~L 310 (491)
||..+|++|||+.++++.|
T Consensus 237 cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 237 CWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HhcCChhhCcCHHHHHHHh
Confidence 9999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-40 Score=309.61 Aligned_cols=241 Identities=21% Similarity=0.261 Sum_probs=196.2
Q ss_pred cCCCCCccEEEEEEE---CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCC
Q 011184 64 EHGEKAPNVVYKGKL---ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 138 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~g 138 (491)
+||+|+||.||+|.+ .++..+|+|+++..... ..+.+.+|+.+++.++||||+++++++. .+..++||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 579999999999974 35788999998654322 2457889999999999999999999885 45678999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-------c
Q 011184 139 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-------S 211 (491)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-------~ 211 (491)
+|.+++.. ...+++..+..++.|++.||.|||+++ ++||||||.||+++.++.+||+|||++....... .
T Consensus 81 ~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05116 81 PLNKFLQK--NKHVTEKNITELVHQVSMGMKYLEETN-FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTH 157 (257)
T ss_pred cHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCC
Confidence 99999963 356899999999999999999999999 9999999999999999999999999987643321 1
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
..++..|+|||.+....++.++||||||+++|||++ |..||.......+...... ......+...++++.++|.
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~l~~li~ 232 (257)
T cd05116 158 GKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIES-----GERMECPQRCPPEMYDLMK 232 (257)
T ss_pred CCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHC-----CCCCCCCCCCCHHHHHHHH
Confidence 123478999999988889999999999999999998 8888765432222111111 1112344567789999999
Q ss_pred HhccCCCCCCCChhHHHHHhccc
Q 011184 291 RCLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~L~~~ 313 (491)
+||+.||++||++.+|...|+..
T Consensus 233 ~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 233 LCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred HHhccCchhCcCHHHHHHHHhcc
Confidence 99999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-40 Score=329.01 Aligned_cols=242 Identities=17% Similarity=0.188 Sum_probs=193.4
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
..|.+++.||+|+||.||++.. .+++.||||... ...+.+|++++++++||||+++++++..+...++|+|++
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~ 165 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY 165 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence 4578888999999999999994 568999999753 235789999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC-----CC
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-----GK 210 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-----~~ 210 (491)
. ++|..++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..... ..
T Consensus 166 ~-~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~ylH~~~-IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~ 241 (391)
T PHA03212 166 K-TDLYCYLAA--KRNIAICDILAIERSVLRAIQYLHENR-IIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYY 241 (391)
T ss_pred C-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHhEEEcCCCCEEEEeCCcccccccccccccc
Confidence 5 789888863 356889999999999999999999998 99999999999999999999999999864322 12
Q ss_pred ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchh--------hHhh---h--cc------------c
Q 011184 211 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL--------DLIR---D--RN------------L 265 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~--------~~~~---~--~~------------~ 265 (491)
...||+.|+|||++.+..++.++|||||||++|||++|..|+..... ..+. . +. .
T Consensus 242 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~ 321 (391)
T PHA03212 242 GWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANL 321 (391)
T ss_pred cccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHH
Confidence 34689999999999988899999999999999999999976543210 0000 0 00 0
Q ss_pred c----cccc--ccccCCC-----CchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 266 Q----MLTD--SCLEGQF-----TDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 266 ~----~~~~--~~~~~~~-----~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
. .... ....... ....+.++.+|+.+||+.||.+|||++++++
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 322 DEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred HHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0 0000 0000000 0134668999999999999999999999997
|
|
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-41 Score=333.62 Aligned_cols=244 Identities=18% Similarity=0.183 Sum_probs=195.0
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC---CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
+++++.||+|+||+||+|.. .+++.||||++..... .....+.+|+.+++.++||||+++++++..++..++||||
T Consensus 3 f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~ 82 (382)
T cd05625 3 FVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDY 82 (382)
T ss_pred cEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeC
Confidence 56778889999999999994 5688999999864321 2245688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC------
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------ 208 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~------ 208 (491)
+++|+|.+++.. .+.+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 83 ~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~al~~lH~~~-ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~ 159 (382)
T cd05625 83 IPGGDMMSLLIR--MGIFPEDLARFYIAELTCAVESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159 (382)
T ss_pred CCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEeECCCCccccccccccc
Confidence 999999999863 356889999999999999999999999 99999999999999999999999998742110
Q ss_pred ---------------------------------------------CCccccCCCCCCcccccCCCCCCCccchhHHHHHH
Q 011184 209 ---------------------------------------------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLL 243 (491)
Q Consensus 209 ---------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ 243 (491)
.....||+.|+|||++.+..++.++|||||||++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~ 239 (382)
T cd05625 160 YQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 239 (382)
T ss_pred cccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHH
Confidence 01235889999999999888999999999999999
Q ss_pred HHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCC---hhHHHH
Q 011184 244 DLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN---PKSLVT 308 (491)
Q Consensus 244 elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps---~~~il~ 308 (491)
||++|+.||................ ...........++++.+++.+|+ .+|.+|++ +.+++.
T Consensus 240 elltG~~Pf~~~~~~~~~~~i~~~~--~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 304 (382)
T cd05625 240 EMLVGQPPFLAQTPLETQMKVINWQ--TSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKA 304 (382)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHccC--CCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence 9999999987543222111111100 00111112345678899998876 49999987 777765
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-40 Score=310.87 Aligned_cols=238 Identities=19% Similarity=0.331 Sum_probs=191.0
Q ss_pred cCCCCCccEEEEEEECC-------------CCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEE
Q 011184 64 EHGEKAPNVVYKGKLEN-------------QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
.||+|+||.||+|++.. ...|++|.+..........+.+|+.+++.++||||+++++++......++
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l 81 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM 81 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence 56999999999998532 23589998866544445578899999999999999999999999889999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCC-------eEEccCCCc
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN-------PRLSTFGLM 203 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~-------~kl~Dfgla 203 (491)
||||+++++|..++.. ....+++..++.++.||+.||.|||+++ ++||||||+|||++.++. ++++|||++
T Consensus 82 v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~ 159 (262)
T cd05077 82 VEEFVEFGPLDLFMHR-KSDVLTTPWKFKVAKQLASALSYLEDKD-LVHGNVCTKNILLAREGIDGECGPFIKLSDPGIP 159 (262)
T ss_pred EEecccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhCC-eECCCCCcccEEEecCCccCCCCceeEeCCCCCC
Confidence 9999999999988854 2356899999999999999999999998 999999999999987664 899999998
Q ss_pred ccCCCCCccccCCCCCCccccc-CCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchh
Q 011184 204 KNSRDGKSYSTNLAFTPPEYLR-TGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 281 (491)
Q Consensus 204 ~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (491)
..........++..|+|||.+. +..++.++|||||||++|+|++ |..|+........... ... . .......
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~-~~~----~--~~~~~~~ 232 (262)
T cd05077 160 ITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERF-YEG----Q--CMLVTPS 232 (262)
T ss_pred ccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHH-Hhc----C--ccCCCCC
Confidence 7765555566788999999886 4568999999999999999984 6666544322211110 000 0 0112233
Q ss_pred HHHHHHHHHHhccCCCCCCCChhHHHHHh
Q 011184 282 GTELVRLASRCLQYEPRERPNPKSLVTAL 310 (491)
Q Consensus 282 ~~~~~~li~~cl~~dp~~Rps~~~il~~L 310 (491)
+.++.+|+.+||+.||.+||++.+|+..|
T Consensus 233 ~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 233 CKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred hHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 56899999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-41 Score=322.48 Aligned_cols=254 Identities=21% Similarity=0.289 Sum_probs=206.9
Q ss_pred ccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCC-hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCC
Q 011184 59 ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 137 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~ 137 (491)
..+.++||+|-||.|.++...++..||||.++...... ...|.+|+++|.+|+||||++++|+|..++.+++|+||+.+
T Consensus 540 L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEn 619 (807)
T KOG1094|consen 540 LRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMEN 619 (807)
T ss_pred eehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhc
Confidence 34568999999999999998788999999998876555 47899999999999999999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCCcc-----
Q 011184 138 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY----- 212 (491)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~----- 212 (491)
|+|.+++.......+.-....+|+.||+.||+||.+.+ +|||||.+.|+|++.++++||+|||+++..-.+..+
T Consensus 620 GDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n-fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr 698 (807)
T KOG1094|consen 620 GDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN-FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGR 698 (807)
T ss_pred CcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc-hhhccccccceeecCcccEEecCcccccccccCCceeeecc
Confidence 99999997543233345566789999999999999998 999999999999999999999999999865443322
Q ss_pred -ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh--CCCCCCCchhhHhhhccccccccccc--cCCCCchhHHHHHH
Q 011184 213 -STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS--GKHIPPSHALDLIRDRNLQMLTDSCL--EGQFTDDDGTELVR 287 (491)
Q Consensus 213 -~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt--g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 287 (491)
.-.+.|||||.+..+++|.+||||+||+++||+++ ...|+.....+.+.+..-..+.++.. -...|.-++..+.+
T Consensus 699 ~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lye 778 (807)
T KOG1094|consen 699 AVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYE 778 (807)
T ss_pred eeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHH
Confidence 23578999999999999999999999999999876 44566543333322221111111111 12345667889999
Q ss_pred HHHHhccCCCCCCCChhHHHHHhccc
Q 011184 288 LASRCLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~L~~~ 313 (491)
+|..||..|.++|||++++...|...
T Consensus 779 lml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 779 LMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred HHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 99999999999999999999887653
|
|
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-41 Score=327.21 Aligned_cols=246 Identities=20% Similarity=0.310 Sum_probs=192.8
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC--CCChhHHHHHHHHHhccCCCCcceEEeEeecC-----CeeEE
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG-----DERLL 130 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~-----~~~~l 130 (491)
|++.+.||+|+||.||+|+. .++..||||++.... ......+.+|+.+++.++||||+++++++... ...++
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l 81 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV 81 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence 56678889999999999994 568999999986432 22345688999999999999999999988543 24799
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 209 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 209 (491)
||||+. ++|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 v~e~~~-~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 157 (338)
T cd07859 82 VFELME-SDLHQVIKA--NDDLTPEHHQFFLYQLLRALKYIHTAN-VFHRDLKPKNILANADCKLKICDFGLARVAFNDT 157 (338)
T ss_pred EEecCC-CCHHHHHHh--cccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCcEEEccCcccccccccc
Confidence 999995 789988863 456899999999999999999999999 999999999999999999999999998754221
Q ss_pred ------CccccCCCCCCcccccC--CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhh-------------------h
Q 011184 210 ------KSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR-------------------D 262 (491)
Q Consensus 210 ------~~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~-------------------~ 262 (491)
....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||......... .
T Consensus 158 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 237 (338)
T cd07859 158 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRN 237 (338)
T ss_pred CccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 23468899999999876 56899999999999999999999888654221100 0
Q ss_pred cc----cccccc--ccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 263 RN----LQMLTD--SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 263 ~~----~~~~~~--~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.. ...+.. +..........++.+.+++.+||+.||++|||++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 238 EKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred hhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00 000000 00000011234567899999999999999999999997
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=315.05 Aligned_cols=250 Identities=22% Similarity=0.273 Sum_probs=201.5
Q ss_pred CccccccccCCCCCccEEEEEEEC------CCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 129 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~ 129 (491)
+..+.+..++|+|+||.||++... ++..+|+|.+..........+.+|+++++.++|+||+++++++...+..+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL 83 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence 345567788999999999999632 35689999987655444668999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHhcccCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeE
Q 011184 130 LVAEYMPNETLAKHLFHWET-------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPR 196 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~-------------~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~k 196 (491)
+||||+++++|.+++..... ..+++..++.++.|++.||.|||+.+ ++||||||+|||+++++.++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~-i~H~dlkp~nil~~~~~~~k 162 (280)
T cd05092 84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH-FVHRDLATRNCLVGQGLVVK 162 (280)
T ss_pred EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC-eecccccHhhEEEcCCCCEE
Confidence 99999999999999864321 34789999999999999999999999 99999999999999999999
Q ss_pred EccCCCcccCCCC------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccc
Q 011184 197 LSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLT 269 (491)
Q Consensus 197 l~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~ 269 (491)
|+|||++...... ....+++.|+|||.+.+..++.++|||||||++|+|++ |..|+...............
T Consensus 163 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-- 240 (280)
T cd05092 163 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQG-- 240 (280)
T ss_pred ECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcC--
Confidence 9999998654321 12234678999999998889999999999999999998 77776443222111111111
Q ss_pred cccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhc
Q 011184 270 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 311 (491)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~ 311 (491)
.....+..+++.+.+++.+||+.||.+||++.+|+..|+
T Consensus 241 ---~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 241 ---RELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred ---ccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 111223456678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-40 Score=315.19 Aligned_cols=254 Identities=20% Similarity=0.307 Sum_probs=199.2
Q ss_pred cccccccCCCCCccEEEEEEEC-----CCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecC--CeeEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-----NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLL 130 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--~~~~l 130 (491)
.+++++.||+|+||+||++... ++..||||++........+.+.+|+++++.++||||+++++++... ...++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 84 (284)
T cd05081 5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRL 84 (284)
T ss_pred cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEE
Confidence 4567788899999999999742 4789999998765544456789999999999999999999987543 46899
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 210 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 210 (491)
||||+++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 85 v~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~aL~~LH~~~-i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 162 (284)
T cd05081 85 VMEYLPYGSLRDYLQK-HRERLDHRKLLLYASQICKGMEYLGSKR-YVHRDLATRNILVESENRVKIGDFGLTKVLPQDK 162 (284)
T ss_pred EEEecCCCCHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCHhhEEECCCCeEEECCCcccccccCCC
Confidence 9999999999999864 2346899999999999999999999999 9999999999999999999999999988654322
Q ss_pred c-------cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhh---hccc--------ccccccc
Q 011184 211 S-------YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR---DRNL--------QMLTDSC 272 (491)
Q Consensus 211 ~-------~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~---~~~~--------~~~~~~~ 272 (491)
. ..++..|+|||++.+..++.++||||||++++||++|..++......... .... .......
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (284)
T cd05081 163 EYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNN 242 (284)
T ss_pred cceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcC
Confidence 1 11234599999998888999999999999999999987654322111110 0000 0000111
Q ss_pred ccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccc
Q 011184 273 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 273 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~ 313 (491)
.....+...+.++.+|+.+||+.+|++|||+.+|++.|+.+
T Consensus 243 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 243 GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 11122345667899999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=324.62 Aligned_cols=232 Identities=21% Similarity=0.246 Sum_probs=189.9
Q ss_pred cCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC---CChhHHHHHHH-HHhccCCCCcceEEeEeecCCeeEEEEecCCCC
Q 011184 64 EHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEAR-SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 138 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~g 138 (491)
.||+|+||+||++.. .+|+.||||++..... .....+..|.. +++.++||||+++++++...+..++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g 81 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGG 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCC
Confidence 469999999999995 4689999999864321 12334555554 567889999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----CCcccc
Q 011184 139 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYST 214 (491)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 214 (491)
+|..++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..... .....|
T Consensus 82 ~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~g-ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (323)
T cd05575 82 ELFFHLQR--ERSFPEPRARFYAAEIASALGYLHSLN-IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCG 158 (323)
T ss_pred CHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccC
Confidence 99998863 457899999999999999999999999 99999999999999999999999999875322 223468
Q ss_pred CCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhcc
Q 011184 215 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 294 (491)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 294 (491)
|+.|+|||++.+..++.++|||||||++|+|++|..||................ ...+...+..+.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~------~~~~~~~~~~~~~li~~~l~ 232 (323)
T cd05575 159 TPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKP------LRLKPNISVSARHLLEGLLQ 232 (323)
T ss_pred ChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC------CCCCCCCCHHHHHHHHHHhh
Confidence 999999999998889999999999999999999999987654333222221111 12334457889999999999
Q ss_pred CCCCCCCChh
Q 011184 295 YEPRERPNPK 304 (491)
Q Consensus 295 ~dp~~Rps~~ 304 (491)
.||.+||++.
T Consensus 233 ~~p~~R~~~~ 242 (323)
T cd05575 233 KDRTKRLGAK 242 (323)
T ss_pred cCHHhCCCCC
Confidence 9999999885
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-40 Score=310.39 Aligned_cols=248 Identities=22% Similarity=0.298 Sum_probs=201.0
Q ss_pred ccccccCCCCCccEEEEEEECC----CCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 59 ENIVSEHGEKAPNVVYKGKLEN----QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
+.+...||+|+||+||+|.+.. ...||||.++..... ....|.+|+.+++.++||||+++++++...+..++|||
T Consensus 6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e 85 (266)
T cd05033 6 VTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITE 85 (266)
T ss_pred ceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEE
Confidence 4455677999999999999632 457999998754322 24578899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC---
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--- 210 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 210 (491)
|+++++|.+++.. ....+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 86 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~Lh~~~-i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 163 (266)
T cd05033 86 YMENGSLDKFLRE-NDGKFTVGQLVGMLRGIASGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATY 163 (266)
T ss_pred cCCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCCEEECccchhhcccccccce
Confidence 9999999999864 2347899999999999999999999998 9999999999999999999999999988764211
Q ss_pred ---ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHH
Q 011184 211 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 211 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
...++..|+|||.+.+..++.++||||||+++|+|++ |..|+................ ....+...+..+.
T Consensus 164 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~ 238 (266)
T cd05033 164 TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGY-----RLPPPMDCPSALY 238 (266)
T ss_pred eccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC-----CCCCCCCCCHHHH
Confidence 1223567999999998889999999999999999998 887775433222221111111 1112335567899
Q ss_pred HHHHHhccCCCCCCCChhHHHHHhccc
Q 011184 287 RLASRCLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~L~~~ 313 (491)
+++.+||+.+|++||++.++++.|+.+
T Consensus 239 ~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 239 QLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred HHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=324.11 Aligned_cols=253 Identities=22% Similarity=0.328 Sum_probs=199.6
Q ss_pred cccccccCCCCCccEEEEEEE-C-----CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhcc-CCCCcceEEeEeecC-Cee
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-E-----NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEG-DER 128 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~-~~~ 128 (491)
.+++++.||.|+||.||+|.. . +++.||+|+++..... ....+.+|+.++.++ +|+||++++++|... ...
T Consensus 8 ~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~ 87 (337)
T cd05054 8 RLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPL 87 (337)
T ss_pred HhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCE
Confidence 467788899999999999973 2 2478999998754322 234678899999999 899999999988654 568
Q ss_pred EEEEecCCCCCHHHHhcccC-----------------------------------------------------------C
Q 011184 129 LLVAEYMPNETLAKHLFHWE-----------------------------------------------------------T 149 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~-----------------------------------------------------------~ 149 (491)
+++|||+++++|.+++.... .
T Consensus 88 ~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (337)
T cd05054 88 MVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYK 167 (337)
T ss_pred EEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhh
Confidence 89999999999999885321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC------CccccCCCCCCccc
Q 011184 150 HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEY 223 (491)
Q Consensus 150 ~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~ 223 (491)
.++++..+..++.||+.||.|||+.+ |+||||||+|||++.++.++|+|||++...... ....++..|+|||+
T Consensus 168 ~~l~~~~~~~~~~qi~~aL~~lH~~~-ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~ 246 (337)
T cd05054 168 EPLTLEDLISYSFQVARGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPES 246 (337)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHH
Confidence 26789999999999999999999998 999999999999999999999999998764322 12334678999999
Q ss_pred ccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCC
Q 011184 224 LRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 302 (491)
Q Consensus 224 ~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps 302 (491)
+.+..++.++|||||||++|||++ |..|+.............. .......+...++++.+++.+||+.+|++||+
T Consensus 247 ~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs 322 (337)
T cd05054 247 IFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLK----EGTRMRAPEYATPEIYSIMLDCWHNNPEDRPT 322 (337)
T ss_pred hcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHh----ccCCCCCCccCCHHHHHHHHHHccCChhhCcC
Confidence 999999999999999999999998 8877754321111000000 00111223345678999999999999999999
Q ss_pred hhHHHHHhccccc
Q 011184 303 PKSLVTALSPLQK 315 (491)
Q Consensus 303 ~~~il~~L~~~~~ 315 (491)
+.++++.|+.+..
T Consensus 323 ~~ell~~l~~~~~ 335 (337)
T cd05054 323 FSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987654
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-40 Score=311.89 Aligned_cols=255 Identities=18% Similarity=0.236 Sum_probs=205.5
Q ss_pred ccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCC---ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
..+++...||.|++|.||++. ..++..+|||.+...... ....+.+|+.+++.++||||+++++++..++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 345667788999999999999 457899999988653322 2357889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-
Q 011184 133 EYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 209 (491)
Q Consensus 133 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 209 (491)
||+++++|.+++... ....+++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEECcchhhhccccCC
Confidence 999999999988632 2346899999999999999999999999 999999999999999999999999987754332
Q ss_pred ---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHH
Q 011184 210 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
....++..|+|||.+.+..++.++|+||||+++|+|++|..|+.......... ...+.........+...+..+.
T Consensus 161 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 238 (267)
T cd08229 161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL--CKKIEQCDYPPLPSDHYSEELR 238 (267)
T ss_pred cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHH--hhhhhcCCCCCCCcccccHHHH
Confidence 23457889999999988889999999999999999999998875433221110 0011111111112234667899
Q ss_pred HHHHHhccCCCCCCCChhHHHHHhcccc
Q 011184 287 RLASRCLQYEPRERPNPKSLVTALSPLQ 314 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~L~~~~ 314 (491)
+++.+||..||++|||+.+|++.++.+.
T Consensus 239 ~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 239 QLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred HHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 9999999999999999999999887653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-40 Score=314.30 Aligned_cols=239 Identities=23% Similarity=0.373 Sum_probs=189.7
Q ss_pred cCCCCCccEEEEEEECC-------------------------CCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceE
Q 011184 64 EHGEKAPNVVYKGKLEN-------------------------QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNL 118 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~ 118 (491)
.||+|+||.||+|.+.. ...|++|++..........+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 57999999999998421 13588999865443334578889999999999999999
Q ss_pred EeEeecCCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC-----
Q 011184 119 LGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG----- 193 (491)
Q Consensus 119 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~----- 193 (491)
++++..++..++||||+++++|..++.. ....+++..+..++.||+.||.|||+++ ++||||||+|||++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiH~dlkp~Nill~~~~~~~~~ 159 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRK-EKGRVPVAWKITVAQQLASALSYLEDKN-LVHGNVCAKNILLARLGLAEGT 159 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCC-ccCCCCCcccEEEeccCcccCc
Confidence 9999999999999999999999998864 3457899999999999999999999998 99999999999997644
Q ss_pred --CeEEccCCCcccCCCCCccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHH-hCCCCCCCchhhHhhhccccccc
Q 011184 194 --NPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLL-SGKHIPPSHALDLIRDRNLQMLT 269 (491)
Q Consensus 194 --~~kl~Dfgla~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~ell-tg~~~~~~~~~~~~~~~~~~~~~ 269 (491)
.++++|||++..........++..|+|||.+.+ ..++.++||||||+++|||+ +|..|+........... ...
T Consensus 160 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~~-- 236 (274)
T cd05076 160 SPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERF-YEK-- 236 (274)
T ss_pred cceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHH-HHh--
Confidence 379999998865544444567888999998875 45899999999999999995 67776654322211110 000
Q ss_pred cccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhc
Q 011184 270 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 311 (491)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~ 311 (491)
....+...++.+.+++.+||+.+|++|||+.++++.|.
T Consensus 237 ----~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 237 ----KHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred ----ccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 01122233467999999999999999999999999773
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=338.51 Aligned_cols=246 Identities=18% Similarity=0.223 Sum_probs=201.8
Q ss_pred cccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecCC--------
Q 011184 58 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGD-------- 126 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~-------- 126 (491)
.|.+.+.||+|+||+||++. ..+|+.||||++...... ....+.+|+.++..++|+||++++..+...+
T Consensus 33 rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~ 112 (496)
T PTZ00283 33 KYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVL 112 (496)
T ss_pred CEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccce
Confidence 56667778999999999999 557999999998654322 2456889999999999999999988775432
Q ss_pred eeEEEEecCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcc
Q 011184 127 ERLLVAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 204 (491)
Q Consensus 127 ~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 204 (491)
..++||||+++|+|.+++... ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 113 ~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~-IiHrDLKP~NILl~~~~~vkL~DFGls~ 191 (496)
T PTZ00283 113 MIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH-MIHRDIKSANILLCSNGLVKLGDFGFSK 191 (496)
T ss_pred EEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEeCCCCEEEEecccCe
Confidence 368999999999999988642 2356899999999999999999999998 9999999999999999999999999987
Q ss_pred cCCC------CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCC
Q 011184 205 NSRD------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 278 (491)
Q Consensus 205 ~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (491)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......+......... ..++
T Consensus 192 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~-----~~~~ 266 (496)
T PTZ00283 192 MYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRY-----DPLP 266 (496)
T ss_pred eccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCC-----CCCC
Confidence 5432 2345689999999999988899999999999999999999999876544333222221111 1234
Q ss_pred chhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 279 DDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 279 ~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
...++++.+++.+||+.||.+||++.+++..
T Consensus 267 ~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 267 PSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 5667899999999999999999999999874
|
|
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=324.57 Aligned_cols=240 Identities=18% Similarity=0.255 Sum_probs=193.1
Q ss_pred cCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC---CChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEEecCCCC
Q 011184 64 EHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPNE 138 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~g 138 (491)
.||+|+||.||++.. .+++.||+|+++.... .....+.+|+.++.++ +||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~ 81 (329)
T cd05618 2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGG 81 (329)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCC
Confidence 469999999999995 4588999999975422 2234577899988877 8999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----CCcccc
Q 011184 139 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYST 214 (491)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 214 (491)
+|..++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (329)
T cd05618 82 DLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCG 158 (329)
T ss_pred CHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccC
Confidence 99988863 457899999999999999999999999 99999999999999999999999999875321 234568
Q ss_pred CCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhH-----hhhccccccccccccCCCCchhHHHHHHHH
Q 011184 215 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQMLTDSCLEGQFTDDDGTELVRLA 289 (491)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 289 (491)
|+.|+|||++.+..++.++|||||||++|+|++|+.||....... ........+.. ....++...+..+.+++
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~~~~~~~~ll 236 (329)
T cd05618 159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPRSLSVKAASVL 236 (329)
T ss_pred CccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc--CCCCCCCCCCHHHHHHH
Confidence 999999999998889999999999999999999999874211000 00000000111 11234556678899999
Q ss_pred HHhccCCCCCCCCh------hHHHH
Q 011184 290 SRCLQYEPRERPNP------KSLVT 308 (491)
Q Consensus 290 ~~cl~~dp~~Rps~------~~il~ 308 (491)
.+||+.||.+||++ .++++
T Consensus 237 ~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05618 237 KSFLNKDPKERLGCHPQTGFADIQG 261 (329)
T ss_pred HHHhcCCHHHcCCCCCCCCHHHHhc
Confidence 99999999999984 56655
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-40 Score=315.12 Aligned_cols=251 Identities=22% Similarity=0.313 Sum_probs=198.5
Q ss_pred cccccCCCCCccEEEEEEE-----CCCCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecC--CeeEEE
Q 011184 60 NIVSEHGEKAPNVVYKGKL-----ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLLV 131 (491)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--~~~~lv 131 (491)
.++..||.|+||+||++.. .++..||+|.++.... .....+.+|+++++.++||||+++++++... ...++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 5678889999999988652 3578899999875432 2346788999999999999999999988653 458899
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 210 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 210 (491)
|||+++++|.+++. ...+++..++.++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++.......
T Consensus 87 ~e~~~~~~l~~~~~---~~~l~~~~~~~i~~~l~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 162 (283)
T cd05080 87 MEYVPLGSLRDYLP---KHKLNLAQLLLFAQQICEGMAYLHSQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 162 (283)
T ss_pred ecCCCCCCHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccChheEEEcCCCcEEEeecccccccCCcch
Confidence 99999999999985 346999999999999999999999998 9999999999999999999999999987654321
Q ss_pred ------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhh--Hhhhc--------ccccccccccc
Q 011184 211 ------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD--LIRDR--------NLQMLTDSCLE 274 (491)
Q Consensus 211 ------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~--~~~~~--------~~~~~~~~~~~ 274 (491)
...++..|+|||.+.+..++.++||||||+++++|++|..|+...... ..... ...........
T Consensus 163 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (283)
T cd05080 163 YYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMR 242 (283)
T ss_pred hhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCC
Confidence 123456799999998888999999999999999999999876432110 00000 00001111111
Q ss_pred CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccc
Q 011184 275 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 314 (491)
Q Consensus 275 ~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~ 314 (491)
...+...+..+.+++.+||+.+|++|||++++++.|+.+.
T Consensus 243 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 243 LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 2234456789999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=328.24 Aligned_cols=245 Identities=18% Similarity=0.189 Sum_probs=198.0
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
..+++++.||+|+||.||++.. .+++.||+|++.... ......+.+|+.+++.++||||+++++++..++..++||
T Consensus 43 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~ 122 (370)
T cd05621 43 EDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVM 122 (370)
T ss_pred HHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 4577888889999999999995 458899999986421 123456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC---
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 209 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 209 (491)
||++||+|.+++. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 123 Ey~~gg~L~~~l~---~~~~~~~~~~~~~~qil~aL~~LH~~~-IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~ 198 (370)
T cd05621 123 EYMPGGDLVNLMS---NYDVPEKWAKFYTAEVVLALDAIHSMG-LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMV 198 (370)
T ss_pred cCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEECCCCCEEEEecccceecccCCce
Confidence 9999999999985 346889999999999999999999998 999999999999999999999999998765322
Q ss_pred --CccccCCCCCCcccccCCC----CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCC--chh
Q 011184 210 --KSYSTNLAFTPPEYLRTGR----VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT--DDD 281 (491)
Q Consensus 210 --~~~~~t~~y~aPE~~~~~~----~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 281 (491)
....||+.|+|||++.+.. ++.++|||||||++|+|++|..||.............. ......++ ...
T Consensus 199 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~----~~~~~~~p~~~~~ 274 (370)
T cd05621 199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMD----HKNSLNFPEDVEI 274 (370)
T ss_pred ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHh----CCcccCCCCcccC
Confidence 2446899999999987543 78899999999999999999999876543222211111 11011122 235
Q ss_pred HHHHHHHHHHhccCCCCC--CCChhHHHHH
Q 011184 282 GTELVRLASRCLQYEPRE--RPNPKSLVTA 309 (491)
Q Consensus 282 ~~~~~~li~~cl~~dp~~--Rps~~~il~~ 309 (491)
+..+.+++..||..++.+ |+++.++++.
T Consensus 275 s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 275 SKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 678999999999865544 8899999884
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-40 Score=308.19 Aligned_cols=247 Identities=22% Similarity=0.323 Sum_probs=201.3
Q ss_pred cccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCC
Q 011184 58 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 137 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~ 137 (491)
.+++...||.|++|.||++...++..+|+|.+.... ...+.+.+|+.+++.++||||+++++++. .+..++||||+++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~ 84 (260)
T cd05069 7 SLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGK 84 (260)
T ss_pred HeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCC
Confidence 356677889999999999997777789999886543 23567889999999999999999999875 4568999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-----cc
Q 011184 138 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SY 212 (491)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 212 (491)
++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++....... ..
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 163 (260)
T cd05069 85 GSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN-YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGA 163 (260)
T ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCC
Confidence 99999997544456889999999999999999999998 9999999999999999999999999987543221 22
Q ss_pred ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
.++..|+|||.+.+..++.++||||||+++|+|++ |..|+............... .....+...+..+.+++.+
T Consensus 164 ~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~ 238 (260)
T cd05069 164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERG-----YRMPCPQGCPESLHELMKL 238 (260)
T ss_pred ccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCcccCHHHHHHHHH
Confidence 34577999999988889999999999999999999 77777654332221111111 1112344567889999999
Q ss_pred hccCCCCCCCChhHHHHHhcc
Q 011184 292 CLQYEPRERPNPKSLVTALSP 312 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~~L~~ 312 (491)
||..||.+||+++++++.|+.
T Consensus 239 ~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 239 CWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HccCCcccCcCHHHHHHHHhc
Confidence 999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=313.82 Aligned_cols=240 Identities=24% Similarity=0.360 Sum_probs=192.9
Q ss_pred cCCCCCccEEEEEEECC-C-------CEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 64 EHGEKAPNVVYKGKLEN-Q-------RRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
.||+|+||+||+|.... + ..|++|.+........+.+..|+.+++.++||||+++++++..++..++||||+
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYV 81 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecC
Confidence 57999999999998532 2 348888876544344567889999999999999999999999989999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCC--------eEEccCCCcccCC
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN--------PRLSTFGLMKNSR 207 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~--------~kl~Dfgla~~~~ 207 (491)
++|+|.+++... ...+++..++.++.||+.||.|||+++ ++||||||+||+++.++. ++++|||++....
T Consensus 82 ~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~ 159 (258)
T cd05078 82 KFGSLDTYLKKN-KNLINISWKLEVAKQLAWALHFLEDKG-LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVL 159 (258)
T ss_pred CCCcHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCccceEEEecccccccCCCceEEecccccccccC
Confidence 999999999642 346899999999999999999999998 999999999999987665 6999999987766
Q ss_pred CCCccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHH
Q 011184 208 DGKSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 208 ~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
......++..|+|||++.+. .++.++||||||+++|+|++|..++.............. ....++...+.++.
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 233 (258)
T cd05078 160 PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYE------DRHQLPAPKWTELA 233 (258)
T ss_pred CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHH------ccccCCCCCcHHHH
Confidence 65566788999999999864 478999999999999999999644432211111000000 01123444557899
Q ss_pred HHHHHhccCCCCCCCChhHHHHHhc
Q 011184 287 RLASRCLQYEPRERPNPKSLVTALS 311 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~L~ 311 (491)
+++.+||+.||++|||++++++.|+
T Consensus 234 ~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 234 NLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred HHHHHHhccChhhCCCHHHHHHhcC
Confidence 9999999999999999999999763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-40 Score=307.96 Aligned_cols=245 Identities=19% Similarity=0.275 Sum_probs=202.9
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC--CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
+.+...+|+|++|.||+++. .++..|++|.+..... .....+.+|+++++.++||||+++++++...+..++||||+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08529 2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYA 81 (256)
T ss_pred ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeC
Confidence 34556779999999999995 4689999999864322 23567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC----c
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----S 211 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~ 211 (491)
+|++|.+++.......+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++....... .
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~-i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~ 160 (256)
T cd08529 82 ENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK-ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT 160 (256)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEEeCCCCEEEcccccceeccCccchhhc
Confidence 9999999997644567899999999999999999999998 9999999999999999999999999987644322 3
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
..+++.|+|||++.+..++.++|+||||+++++|++|+.|+................ ....+...+..+.+++.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~ 235 (256)
T cd08529 161 IVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGV-----FPPVSQMYSQQLAQLIDQ 235 (256)
T ss_pred cccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-----CCCCccccCHHHHHHHHH
Confidence 357788999999998889999999999999999999999886554322222111111 112233566789999999
Q ss_pred hccCCCCCCCChhHHHHH
Q 011184 292 CLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~~ 309 (491)
||+.+|++||++.++++.
T Consensus 236 ~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 236 CLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred HccCCcccCcCHHHHhhC
Confidence 999999999999999873
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-40 Score=307.51 Aligned_cols=248 Identities=26% Similarity=0.383 Sum_probs=205.5
Q ss_pred cccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCC
Q 011184 58 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 137 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~ 137 (491)
.+++...+|.|++|.||++... |+.||||.+..... ..+.+.+|+.+++.++|+||+++++++...+..++||||+++
T Consensus 7 ~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 84 (256)
T cd05039 7 ELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAK 84 (256)
T ss_pred hccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCC
Confidence 4556677899999999999874 78999999976543 466899999999999999999999999988999999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCCc-cccCC
Q 011184 138 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNL 216 (491)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-~~~t~ 216 (491)
++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++........ ...+.
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~-i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 163 (256)
T cd05039 85 GSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN-FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPV 163 (256)
T ss_pred CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccchhcccceEEEeCCCCEEEcccccccccccccccCCCcc
Confidence 99999997544447899999999999999999999998 99999999999999999999999999887643322 23356
Q ss_pred CCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccC
Q 011184 217 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 295 (491)
Q Consensus 217 ~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~ 295 (491)
.|+|||.+.+..++.++||||||++++++++ |..|+............... .....+...++.+.+++.+||..
T Consensus 164 ~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~ 238 (256)
T cd05039 164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKG-----YRMEAPEGCPPEVYKVMKDCWEL 238 (256)
T ss_pred cccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC-----CCCCCccCCCHHHHHHHHHHhcc
Confidence 7999999988889999999999999999998 88777554333222211111 11123345568899999999999
Q ss_pred CCCCCCChhHHHHHhccc
Q 011184 296 EPRERPNPKSLVTALSPL 313 (491)
Q Consensus 296 dp~~Rps~~~il~~L~~~ 313 (491)
+|++|||+.++++.|+.+
T Consensus 239 ~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 239 DPAKRPTFKQLREQLALI 256 (256)
T ss_pred ChhhCcCHHHHHHHHhcC
Confidence 999999999999998653
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-40 Score=315.88 Aligned_cols=255 Identities=21% Similarity=0.270 Sum_probs=203.3
Q ss_pred ccccccccCCCCCccEEEEEEEC-CCC--EEEEEEeCCCCC-CChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE-NQR--RIAVKRFNRMAW-PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv 131 (491)
+.+.+.+.||.|+||.||+|... ++. .+++|.++.... ...+.+.+|++++.++ +||||+++++++...+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 45667778899999999999854 333 478888874322 2345788999999999 799999999999999999999
Q ss_pred EecCCCCCHHHHhcccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEE
Q 011184 132 AEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRL 197 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl 197 (491)
|||+++++|.+++.... ...+++..++.++.|++.||+|||+.+ ++||||||+|||++.++.+||
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kl 160 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ-FIHRDLAARNVLVGENLASKI 160 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCcCCcceEEECCCCeEEE
Confidence 99999999999986421 134788999999999999999999998 999999999999999999999
Q ss_pred ccCCCcccCCCC---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccc
Q 011184 198 STFGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCL 273 (491)
Q Consensus 198 ~Dfgla~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (491)
+|||++...... .....+..|+|||++.+..++.++|||||||++|||++ |..||............... .
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~-----~ 235 (297)
T cd05089 161 ADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-----Y 235 (297)
T ss_pred CCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC-----C
Confidence 999998643221 11223457999999988889999999999999999998 88887654433222211111 1
Q ss_pred cCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccC
Q 011184 274 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 274 ~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
....+..++..+.+|+.+||+.+|.+|||+.++++.|+.+....
T Consensus 236 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 236 RMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 11233456678999999999999999999999999998877644
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-40 Score=311.91 Aligned_cols=251 Identities=17% Similarity=0.234 Sum_probs=197.9
Q ss_pred cccccccCCCCCccEEEEEEE-CCCC----EEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQR----RIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
++++++.||.|+||+||+|.+ .+++ .+++|.+...... ....+..|+.++.+++||||+++++++.. ...+++
T Consensus 8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~i 86 (279)
T cd05111 8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQLV 86 (279)
T ss_pred hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEEE
Confidence 456678889999999999995 3444 4778887543221 23567788889999999999999998854 557899
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC--
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 209 (491)
+||+++|+|.+++.. ....+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 87 ~e~~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T cd05111 87 TQLSPLGSLLDHVRQ-HRDSLDPQRLLNWCVQIAKGMYYLEEHR-MVHRNLAARNILLKSDSIVQIADFGVADLLYPDDK 164 (279)
T ss_pred EEeCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-EeccccCcceEEEcCCCcEEEcCCccceeccCCCc
Confidence 999999999999964 2457899999999999999999999998 999999999999999999999999998754322
Q ss_pred ----CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHH
Q 011184 210 ----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 284 (491)
Q Consensus 210 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (491)
....++..|++||.+.+..++.++||||||+++|||++ |..|+.+.......... ........+..++.+
T Consensus 165 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 239 (279)
T cd05111 165 KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLL-----EKGERLAQPQICTID 239 (279)
T ss_pred ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-----HCCCcCCCCCCCCHH
Confidence 12345678999999998889999999999999999998 88877654332221111 010111112234567
Q ss_pred HHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 285 LVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 285 ~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
+..++.+||..||.+|||+.++++.|..+...
T Consensus 240 ~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 240 VYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred HHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 89999999999999999999999999887653
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-40 Score=318.88 Aligned_cols=246 Identities=20% Similarity=0.207 Sum_probs=210.9
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCC---hhHHHHHHHHHhccC-CCCcceEEeEeecCCeeEEEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~~lv~ 132 (491)
.|++...||.|.||+||+++.. +|+.+|+|++.+..... .....+|+.+|+++. |||||.++++|.....+++||
T Consensus 36 ~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvm 115 (382)
T KOG0032|consen 36 KYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVM 115 (382)
T ss_pred cEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEE
Confidence 4667788999999999999954 59999999997655433 358999999999998 999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC----CCCeEEccCCCcccCCC
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE----DGNPRLSTFGLMKNSRD 208 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~----~~~~kl~Dfgla~~~~~ 208 (491)
|++.||.|.+.+... .+++.....++.|++.++.|||+.| |+||||||+|+|+.. ++.+|++|||++.....
T Consensus 116 EL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~g-vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~ 191 (382)
T KOG0032|consen 116 ELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLG-VVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP 191 (382)
T ss_pred EecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCC-ceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC
Confidence 999999999999764 3999999999999999999999999 999999999999953 35799999999988765
Q ss_pred C---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHH
Q 011184 209 G---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 285 (491)
Q Consensus 209 ~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (491)
. ...+||+.|+|||++.+..++..+||||+||++|.|++|.+||.+.............-. ..........+..+
T Consensus 192 ~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~--~f~~~~w~~is~~a 269 (382)
T KOG0032|consen 192 GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDF--DFTSEPWDDISESA 269 (382)
T ss_pred CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCC--CCCCCCccccCHHH
Confidence 3 355799999999999999999999999999999999999999987764443332222211 22334456678899
Q ss_pred HHHHHHhccCCCCCCCChhHHHHH
Q 011184 286 VRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
.+++..||..||..|+|+.++++.
T Consensus 270 kd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 270 KDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred HHHHHHhcccCcccCCCHHHHhcC
Confidence 999999999999999999999993
|
|
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-40 Score=317.02 Aligned_cols=257 Identities=22% Similarity=0.297 Sum_probs=203.0
Q ss_pred CccccccccCCCCCccEEEEEEEC-CCC--EEEEEEeCCCCC-CChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLE-NQR--RIAVKRFNRMAW-PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~l 130 (491)
+.++++.+.||+|+||.||+|... ++. .+++|.++.... .....+.+|++++.++ +||||+++++++..++..++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 445667788899999999999953 454 467887764322 2345788999999999 89999999999999999999
Q ss_pred EEecCCCCCHHHHhcccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeE
Q 011184 131 VAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPR 196 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~k 196 (491)
||||+++++|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+|||++.++.+|
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g-i~H~dlkp~Nili~~~~~~k 164 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAK 164 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchheEEecCCCcEE
Confidence 999999999999986421 135789999999999999999999999 99999999999999999999
Q ss_pred EccCCCcccCCCC---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhcccccccccc
Q 011184 197 LSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSC 272 (491)
Q Consensus 197 l~Dfgla~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~ 272 (491)
|+|||++...... ....++..|+|||.+.+..++.++||||||+++++|+| |..|+.............. .
T Consensus 165 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~-----~ 239 (303)
T cd05088 165 IADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-----G 239 (303)
T ss_pred eCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhc-----C
Confidence 9999998643211 11223567999999988889999999999999999998 8877754432222111111 1
Q ss_pred ccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccCC
Q 011184 273 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 318 (491)
Q Consensus 273 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~ 318 (491)
.....+...+..+.+|+.+||+.+|++||++.+++..|..+.....
T Consensus 240 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~ 285 (303)
T cd05088 240 YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 285 (303)
T ss_pred CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence 1112233456789999999999999999999999999987766543
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=307.26 Aligned_cols=249 Identities=24% Similarity=0.375 Sum_probs=205.6
Q ss_pred cccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCC
Q 011184 58 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 137 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~ 137 (491)
.+.+.+.+|.|++|+||++...++..||||.+.... .....+.+|+.+++.++||||+++++++......++||||+++
T Consensus 7 ~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 85 (261)
T cd05034 7 SLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSK 85 (261)
T ss_pred heeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCC
Confidence 456667889999999999998778889999987543 3456799999999999999999999999988899999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-----cc
Q 011184 138 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SY 212 (491)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 212 (491)
++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++....... ..
T Consensus 86 ~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~-i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 164 (261)
T cd05034 86 GSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN-YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGA 164 (261)
T ss_pred CCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcchheEEEcCCCCEEECccccceeccchhhhhhhcc
Confidence 99999997644457899999999999999999999998 9999999999999999999999999987654321 22
Q ss_pred ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
..+..|+|||.+.+..++.++||||||+++++|++ |+.|+................ ....+...+..+.+++.+
T Consensus 165 ~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~ 239 (261)
T cd05034 165 KFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGY-----RMPRPPNCPEELYDLMLQ 239 (261)
T ss_pred CCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-----CCCCCCCCCHHHHHHHHH
Confidence 24567999999998889999999999999999999 888776543322222111111 112233446789999999
Q ss_pred hccCCCCCCCChhHHHHHhccc
Q 011184 292 CLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~~L~~~ 313 (491)
||+.+|++||++.++++.|+.+
T Consensus 240 ~l~~~p~~Rp~~~~l~~~l~~~ 261 (261)
T cd05034 240 CWDKDPEERPTFEYLQSFLEDY 261 (261)
T ss_pred HcccCcccCCCHHHHHHHHhcC
Confidence 9999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=324.22 Aligned_cols=235 Identities=18% Similarity=0.208 Sum_probs=191.1
Q ss_pred cCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC---CChhHHHHHHH-HHhccCCCCcceEEeEeecCCeeEEEEecCCCC
Q 011184 64 EHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEAR-SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 138 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~g 138 (491)
.||+|+||+||++.. .+|+.||||++..... .....+..|.. +++.++||||+++++++..++..++||||++||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGG 81 (325)
T ss_pred ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCC
Confidence 469999999999994 5689999999864321 12344556654 467789999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----CCcccc
Q 011184 139 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYST 214 (491)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 214 (491)
+|..++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~g-ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (325)
T cd05604 82 ELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSIN-IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCG 158 (325)
T ss_pred CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccC
Confidence 9998886 3467899999999999999999999999 99999999999999999999999999875321 234468
Q ss_pred CCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhcc
Q 011184 215 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 294 (491)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 294 (491)
|+.|+|||++.+..++.++|||||||++|+|++|..||................ ...+...+..+.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ll~~ll~ 232 (325)
T cd05604 159 TPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKP------LVLRPGASLTAWSILEELLE 232 (325)
T ss_pred ChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCC------ccCCCCCCHHHHHHHHHHhc
Confidence 999999999998889999999999999999999999887654333222221111 11233456789999999999
Q ss_pred CCCCCCCChhHHH
Q 011184 295 YEPRERPNPKSLV 307 (491)
Q Consensus 295 ~dp~~Rps~~~il 307 (491)
.+|.+||++.+.+
T Consensus 233 ~~p~~R~~~~~~~ 245 (325)
T cd05604 233 KDRQRRLGAKEDF 245 (325)
T ss_pred cCHHhcCCCCCCH
Confidence 9999999886433
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-41 Score=323.84 Aligned_cols=251 Identities=21% Similarity=0.334 Sum_probs=214.5
Q ss_pred cccccCCCCCccEEEEEEECC-CCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCC
Q 011184 60 NIVSEHGEKAPNVVYKGKLEN-QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 138 (491)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~g 138 (491)
.+..+||-|-||.||.|+|+. .-.||||.++.+. ...++|+.|+.+|+.++|||+|+++|+|.....+|||+|||.+|
T Consensus 270 tMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yG 348 (1157)
T KOG4278|consen 270 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYG 348 (1157)
T ss_pred eeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCc
Confidence 344688999999999999765 6789999998765 35789999999999999999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC--cccc--
Q 011184 139 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYST-- 214 (491)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--~~~~-- 214 (491)
+|.+||+..+...++.-..+.++.||..||+||..++ +|||||-..|+|+.++..+||+|||+++...... ...|
T Consensus 349 NLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn-FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAK 427 (1157)
T KOG4278|consen 349 NLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAK 427 (1157)
T ss_pred cHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh-hhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCcc
Confidence 9999999876677888888999999999999999998 9999999999999999999999999999865443 2223
Q ss_pred -CCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 011184 215 -NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 292 (491)
Q Consensus 215 -t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 292 (491)
.+.|.|||.+....++.|+|||+|||+|||+.| |..|+++-....+. .+........-|..+++.+.+||..|
T Consensus 428 FPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY-----~LLEkgyRM~~PeGCPpkVYeLMraC 502 (1157)
T KOG4278|consen 428 FPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-----GLLEKGYRMDGPEGCPPKVYELMRAC 502 (1157)
T ss_pred CcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHH-----HHHhccccccCCCCCCHHHHHHHHHH
Confidence 467999999999999999999999999999999 66677765433221 22222233345677889999999999
Q ss_pred ccCCCCCCCChhHHHHHhccccccC
Q 011184 293 LQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 293 l~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
|++.|.+||++.||-+.++.+....
T Consensus 503 W~WsPsDRPsFaeiHqafEtmf~~s 527 (1157)
T KOG4278|consen 503 WNWSPSDRPSFAEIHQAFETMFSSS 527 (1157)
T ss_pred hcCCcccCccHHHHHHHHHHHhccc
Confidence 9999999999999999998877654
|
|
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-40 Score=313.75 Aligned_cols=245 Identities=18% Similarity=0.246 Sum_probs=198.0
Q ss_pred ccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC---ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 61 IVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
..+.||.|+||+||++.. .+++.||+|.+...... ....+.+|+++++.++|+||+.+.+++..++..++||||++
T Consensus 4 ~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 83 (285)
T cd05632 4 QYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMN 83 (285)
T ss_pred EEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEecc
Confidence 345569999999999995 56899999998653322 23457889999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC---Cccc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYS 213 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~ 213 (491)
+++|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||++...... ....
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 162 (285)
T cd05632 84 GGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN-TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGRV 162 (285)
T ss_pred CccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccCCC
Confidence 999998886544457999999999999999999999999 999999999999999999999999998654322 2346
Q ss_pred cCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhc
Q 011184 214 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 293 (491)
Q Consensus 214 ~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 293 (491)
|+..|+|||.+.+..++.++|+||||+++|+|++|..||...............+... ...++...+..+.+|+..||
T Consensus 163 g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l 240 (285)
T cd05632 163 GTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLET--EEVYSAKFSEEAKSICKMLL 240 (285)
T ss_pred CCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcc--ccccCccCCHHHHHHHHHHc
Confidence 7899999999998889999999999999999999999886543221111111111111 11234456678999999999
Q ss_pred cCCCCCCCC-----hhHHHH
Q 011184 294 QYEPRERPN-----PKSLVT 308 (491)
Q Consensus 294 ~~dp~~Rps-----~~~il~ 308 (491)
+.||++||+ +.+++.
T Consensus 241 ~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 241 TKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred cCCHhHcCCCcccChHHHHc
Confidence 999999999 556665
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=306.90 Aligned_cols=242 Identities=20% Similarity=0.264 Sum_probs=195.1
Q ss_pred cCCCCCccEEEEEEEC---CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCC
Q 011184 64 EHGEKAPNVVYKGKLE---NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 139 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gs 139 (491)
+||+|+||.||+|.+. .+..||+|++...... ..+.+.+|+.++++++||||+++++++. .+..++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 4799999999999853 3557999998754322 2456899999999999999999999885 457899999999999
Q ss_pred HHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCCc-------c
Q 011184 140 LAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-------Y 212 (491)
Q Consensus 140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-------~ 212 (491)
|.+++.. ....+++..+++++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++........ .
T Consensus 81 L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 158 (257)
T cd05115 81 LNKFLSG-KKDEITVSNVVELMHQVSMGMKYLEGKN-FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG 158 (257)
T ss_pred HHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhcC-eeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCC
Confidence 9999864 2457899999999999999999999998 99999999999999999999999999875432211 1
Q ss_pred ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
.++..|+|||.+.+..++.++||||||+++|++++ |..|+.......+..... .......+...++++.+++.+
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~li~~ 233 (257)
T cd05115 159 KWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIE-----QGKRLDCPAECPPEMYALMKD 233 (257)
T ss_pred CCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHH-----CCCCCCCCCCCCHHHHHHHHH
Confidence 22467999999988889999999999999999997 887775443222211111 111123445567899999999
Q ss_pred hccCCCCCCCChhHHHHHhccc
Q 011184 292 CLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~~L~~~ 313 (491)
||..+|++||++.+|.+.|+.+
T Consensus 234 c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 234 CWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HcCCChhhCcCHHHHHHHHhhh
Confidence 9999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-40 Score=315.39 Aligned_cols=250 Identities=20% Similarity=0.262 Sum_probs=206.7
Q ss_pred HhcCCccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEE
Q 011184 52 ATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 52 ~~~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
..+....+.+++.||.|++|.||++.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++..++..++
T Consensus 14 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l 93 (297)
T cd06656 14 VGDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 93 (297)
T ss_pred cCChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEE
Confidence 334446678888999999999999994 5789999999976555556778899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 209 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 209 (491)
||||+++++|.+++. ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.++|+|||++......
T Consensus 94 v~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~l~~~L~~LH~~~-i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~ 169 (297)
T cd06656 94 VMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALDFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (297)
T ss_pred eecccCCCCHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEECcCccceEccCCc
Confidence 999999999999985 356889999999999999999999998 999999999999999999999999998754332
Q ss_pred ---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHH
Q 011184 210 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
....+++.|+|||.+.+..++.++|+||||+++|+|++|..||......... .............+...+..+.
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 246 (297)
T cd06656 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL---YLIATNGTPELQNPERLSAVFR 246 (297)
T ss_pred cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhe---eeeccCCCCCCCCccccCHHHH
Confidence 2345788999999999888999999999999999999999888543221110 0001111111123445667899
Q ss_pred HHHHHhccCCCCCCCChhHHHH
Q 011184 287 RLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~ 308 (491)
+++.+||+.+|++||++.+++.
T Consensus 247 ~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 247 DFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred HHHHHHccCChhhCcCHHHHhc
Confidence 9999999999999999999998
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-40 Score=314.51 Aligned_cols=257 Identities=18% Similarity=0.211 Sum_probs=206.4
Q ss_pred HHHHHHhcCCccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecC
Q 011184 47 EQLKNATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG 125 (491)
Q Consensus 47 ~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~ 125 (491)
+++.+.....+.+++++.+|.|+||.||++.. .++..|++|.+..........+.+|+.+++.++||||+++++++..+
T Consensus 2 ~~~~~~~~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 81 (292)
T cd06644 2 EHVRRDLDPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWD 81 (292)
T ss_pred chhhcccCcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeC
Confidence 34555555567788999999999999999995 45899999999765544456788999999999999999999999999
Q ss_pred CeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCccc
Q 011184 126 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 205 (491)
Q Consensus 126 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 205 (491)
+..++||||+++++|..++.. ....+++..+..++.|++.+|.|||+.+ ++||||||+||+++.++.++|+|||++..
T Consensus 82 ~~~~lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~ 159 (292)
T cd06644 82 GKLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQVICRQMLEALQYLHSMK-IIHRDLKAGNVLLTLDGDIKLADFGVSAK 159 (292)
T ss_pred CeEEEEEecCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhcCC-eeecCCCcceEEEcCCCCEEEccCcccee
Confidence 999999999999999887754 2356899999999999999999999998 99999999999999999999999998765
Q ss_pred CCCC----CccccCCCCCCcccccC-----CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCC
Q 011184 206 SRDG----KSYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 276 (491)
Q Consensus 206 ~~~~----~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (491)
.... ....+++.|+|||++.+ ..++.++|||||||++|+|++|..|+............... ......
T Consensus 160 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---~~~~~~ 236 (292)
T cd06644 160 NVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS---EPPTLS 236 (292)
T ss_pred ccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcC---CCccCC
Confidence 3222 23457789999999853 34688999999999999999999887543221111111111 011112
Q ss_pred CCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 277 FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 277 ~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.+...+.++.+++.+||..+|++||++.++++
T Consensus 237 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 237 QPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred CCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 23455678999999999999999999999987
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=324.77 Aligned_cols=195 Identities=17% Similarity=0.201 Sum_probs=172.9
Q ss_pred cccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccC-C-----CCcceEEeEeecCCeeEE
Q 011184 58 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-N-----NRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H-----~niv~~~~~~~~~~~~~l 130 (491)
.|.+++.||+|+||.|-+|. ..+++.||||+++... .-..+-..|+.+|..|+ | -|+|+++++|...++.||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 56778999999999999999 5679999999997543 23556778999999996 4 379999999999999999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCC--CCeEEccCCCcccCCC
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED--GNPRLSTFGLMKNSRD 208 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~--~~~kl~Dfgla~~~~~ 208 (491)
|+|.+. -+|.+++...+...++...++.|+.||+.||.+||+.+ |||+||||+||||.+. ..+||+|||.+.....
T Consensus 266 VfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~-IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q 343 (586)
T KOG0667|consen 266 VFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG-IIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQ 343 (586)
T ss_pred eehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCChhheeeccCCcCceeEEecccccccCC
Confidence 999996 89999998766778999999999999999999999998 9999999999999643 3699999999887654
Q ss_pred C-CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCc
Q 011184 209 G-KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH 255 (491)
Q Consensus 209 ~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~ 255 (491)
. ..+..+..|.|||++.|.+|+.+.||||||||+.||++|.+.|+++
T Consensus 344 ~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 344 RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 3 3566789999999999999999999999999999999999888775
|
|
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=304.81 Aligned_cols=241 Identities=25% Similarity=0.404 Sum_probs=198.4
Q ss_pred cCCCCCccEEEEEEECCCCEEEEEEeCCCCCCC-hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCCHHH
Q 011184 64 EHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 142 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gsL~~ 142 (491)
.||.|+||.||+|...++..||+|.+....... ...+.+|+++++.++||||+++++++...+..++||||+++++|.+
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 81 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS 81 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence 469999999999998788999999987544222 3468899999999999999999999999999999999999999999
Q ss_pred HhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-----ccccCCC
Q 011184 143 HLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLA 217 (491)
Q Consensus 143 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~~~t~~ 217 (491)
++.. ....+++..+..++.|++.+|.|||+.+ ++||||||+||+++.++.++|+|||++....... ...++..
T Consensus 82 ~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~ 159 (250)
T cd05085 82 FLRK-KKDELKTKQLVKFALDAAAGMAYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIK 159 (250)
T ss_pred HHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCccc
Confidence 8864 2346889999999999999999999998 9999999999999999999999999986543221 1233567
Q ss_pred CCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCC
Q 011184 218 FTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 296 (491)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d 296 (491)
|+|||++.+..++.++||||||+++|++++ |..|+............... .....+..++..+.+++.+||+.+
T Consensus 160 y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~ 234 (250)
T cd05085 160 WTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKG-----YRMSCPQKCPDDVYKVMQRCWDYK 234 (250)
T ss_pred ccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHHHHHHHcccC
Confidence 999999998889999999999999999998 88777654333222111111 112234456789999999999999
Q ss_pred CCCCCChhHHHHHhc
Q 011184 297 PRERPNPKSLVTALS 311 (491)
Q Consensus 297 p~~Rps~~~il~~L~ 311 (491)
|++||++.++++.|.
T Consensus 235 p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 235 PENRPKFSELQKELA 249 (250)
T ss_pred cccCCCHHHHHHHhc
Confidence 999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=314.94 Aligned_cols=245 Identities=18% Similarity=0.274 Sum_probs=198.6
Q ss_pred ccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCC---hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 61 IVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
+.+.||+|+||+||++.. .+++.||||.+....... ...+.+|+.++++++|+||+.+++.+...+..++||||++
T Consensus 4 ~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 83 (285)
T cd05630 4 QYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMN 83 (285)
T ss_pred eeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecC
Confidence 445569999999999994 468999999986543222 3457789999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC---ccc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYS 213 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---~~~ 213 (491)
|++|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... ...
T Consensus 84 g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 162 (285)
T cd05630 84 GGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV 162 (285)
T ss_pred CCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccCCC
Confidence 999999886544456899999999999999999999998 9999999999999999999999999987644332 246
Q ss_pred cCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhc
Q 011184 214 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 293 (491)
Q Consensus 214 ~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 293 (491)
|+..|+|||++.+..++.++||||||+++|+|++|..||......... ......... ....++...++++.+|+.+||
T Consensus 163 g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l 240 (285)
T cd05630 163 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR-EEVERLVKE-VQEEYSEKFSPDARSLCKMLL 240 (285)
T ss_pred CCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchH-HHHHhhhhh-hhhhcCccCCHHHHHHHHHHh
Confidence 789999999999888999999999999999999999988653211000 001111111 111234456678999999999
Q ss_pred cCCCCCCCC-----hhHHHH
Q 011184 294 QYEPRERPN-----PKSLVT 308 (491)
Q Consensus 294 ~~dp~~Rps-----~~~il~ 308 (491)
+.||.+||| ++++++
T Consensus 241 ~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 241 CKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred hcCHHHccCCCCCchHHHHc
Confidence 999999999 788887
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-41 Score=294.80 Aligned_cols=251 Identities=20% Similarity=0.210 Sum_probs=202.6
Q ss_pred cCCccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCC----CCh----hHHHHHHHHHhcc-CCCCcceEEeEee
Q 011184 54 SGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW----PDP----RQFLEEARSVGQL-RNNRLTNLLGCCC 123 (491)
Q Consensus 54 ~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~----~~~----~~~~~E~~~l~~l-~H~niv~~~~~~~ 123 (491)
..|..++-...+|.|..++|-++. ..+|..+|+|++..... ... +.-.+|+.+|+++ .||+|+.+.+++.
T Consensus 14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye 93 (411)
T KOG0599|consen 14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE 93 (411)
T ss_pred hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence 344445555566999999999988 55688999999854221 112 3456899999999 6999999999999
Q ss_pred cCCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCc
Q 011184 124 EGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLM 203 (491)
Q Consensus 124 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 203 (491)
.+..+++|+|.|+.|.|.++|. ..-.+++....+|++|+..|++|||..+ ||||||||+|||++++.++||+|||++
T Consensus 94 s~sF~FlVFdl~prGELFDyLt--s~VtlSEK~tR~iMrqlfegVeylHa~~-IVHRDLKpENILlddn~~i~isDFGFa 170 (411)
T KOG0599|consen 94 SDAFVFLVFDLMPRGELFDYLT--SKVTLSEKETRRIMRQLFEGVEYLHARN-IVHRDLKPENILLDDNMNIKISDFGFA 170 (411)
T ss_pred CcchhhhhhhhcccchHHHHhh--hheeecHHHHHHHHHHHHHHHHHHHHhh-hhhcccChhheeeccccceEEecccee
Confidence 9999999999999999999996 3457999999999999999999999998 999999999999999999999999999
Q ss_pred ccCCCCC---ccccCCCCCCcccccC------CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccccccccccc
Q 011184 204 KNSRDGK---SYSTNLAFTPPEYLRT------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE 274 (491)
Q Consensus 204 ~~~~~~~---~~~~t~~y~aPE~~~~------~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (491)
+....+. ..+||++|+|||.+.. ..|+...|+|++||++|.|+.|.+||+-...-.+...+....- ...
T Consensus 171 ~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGky--qF~ 248 (411)
T KOG0599|consen 171 CQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKY--QFR 248 (411)
T ss_pred eccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhccc--ccC
Confidence 9877664 5689999999998864 3488899999999999999999988864322211111111110 111
Q ss_pred CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 275 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 275 ~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
..-+.+.+....+||.+||+.||.+|.|++|+|+.
T Consensus 249 speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 249 SPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred CcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 22245677889999999999999999999999974
|
|
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-40 Score=326.33 Aligned_cols=252 Identities=18% Similarity=0.174 Sum_probs=199.1
Q ss_pred hcCCccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCee
Q 011184 53 TSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 128 (491)
Q Consensus 53 ~~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~ 128 (491)
.-....+++++.||+|+||.||++.. .+++.||+|++.... ......+.+|+.+++.++||||+++++++..++..
T Consensus 39 ~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (371)
T cd05622 39 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL 118 (371)
T ss_pred CcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence 33345677788889999999999995 458899999986422 12244578899999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC
Q 011184 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 208 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 208 (491)
++||||++||+|.+++. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 119 ~lv~Ey~~gg~L~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~ 194 (371)
T cd05622 119 YMVMEYMPGGDLVNLMS---NYDVPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK 194 (371)
T ss_pred EEEEcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHEEECCCCCEEEEeCCceeEcCc
Confidence 99999999999999985 346888999999999999999999999 99999999999999999999999999876432
Q ss_pred C-----CccccCCCCCCcccccCCC----CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCc
Q 011184 209 G-----KSYSTNLAFTPPEYLRTGR----VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 279 (491)
Q Consensus 209 ~-----~~~~~t~~y~aPE~~~~~~----~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (491)
. ....||+.|+|||++.+.. ++.++|||||||++|||++|..||.................. .......
T Consensus 195 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~ 272 (371)
T cd05622 195 EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNS--LTFPDDN 272 (371)
T ss_pred CCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCc--ccCCCcC
Confidence 2 2456899999999987543 788999999999999999999998765433222221111100 0001123
Q ss_pred hhHHHHHHHHHHhccCCCCC--CCChhHHHHHh
Q 011184 280 DDGTELVRLASRCLQYEPRE--RPNPKSLVTAL 310 (491)
Q Consensus 280 ~~~~~~~~li~~cl~~dp~~--Rps~~~il~~L 310 (491)
..+..+.+++.+||..++.+ |++++++++..
T Consensus 273 ~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 273 DISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred CCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 46788999999999844433 67899988754
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=322.17 Aligned_cols=236 Identities=20% Similarity=0.229 Sum_probs=190.6
Q ss_pred cCCCCCccEEEEEEEC-CCCEEEEEEeCCCCC---CChhHHHHHHH-HHhccCCCCcceEEeEeecCCeeEEEEecCCCC
Q 011184 64 EHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW---PDPRQFLEEAR-SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 138 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~g 138 (491)
.||+|+||+||++... +++.||+|++..... .....+..|.. +++.++||||+++++++...+..++||||++|+
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG 81 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCC
Confidence 5799999999999954 578899999864321 12234444444 567889999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----CCcccc
Q 011184 139 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYST 214 (491)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 214 (491)
+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~g-iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~g 158 (325)
T cd05602 82 ELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCG 158 (325)
T ss_pred cHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccC
Confidence 99998863 456888889999999999999999999 99999999999999999999999999875322 234568
Q ss_pred CCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhcc
Q 011184 215 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 294 (491)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 294 (491)
|+.|+|||++.+..++.++|||||||++|+|++|..||............... ...++...+..+.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l~ 232 (325)
T cd05602 159 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK------PLQLKPNITNSARHLLEGLLQ 232 (325)
T ss_pred CccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhC------CcCCCCCCCHHHHHHHHHHcc
Confidence 99999999999888999999999999999999999998765433222211111 112334567889999999999
Q ss_pred CCCCCCCChhHHHH
Q 011184 295 YEPRERPNPKSLVT 308 (491)
Q Consensus 295 ~dp~~Rps~~~il~ 308 (491)
.||.+||++.+.+.
T Consensus 233 ~~p~~R~~~~~~~~ 246 (325)
T cd05602 233 KDRTKRLGAKDDFM 246 (325)
T ss_pred cCHHHCCCCCCCHH
Confidence 99999998875443
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=325.78 Aligned_cols=246 Identities=17% Similarity=0.171 Sum_probs=198.5
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC---CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
.++++..||+|+||+||++.. .+|+.||||+++.... .....+.+|+.+++.++||||+++++++...+..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME 81 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence 356677889999999999994 4689999999975322 234568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC---
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--- 210 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 210 (491)
|+++|+|.+++... ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~-i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 159 (330)
T cd05601 82 YQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQMG-YVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVN 159 (330)
T ss_pred CCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEcccCchHheEECCCCCEEeccCCCCeECCCCCcee
Confidence 99999999999642 357899999999999999999999999 9999999999999999999999999987654322
Q ss_pred --ccccCCCCCCccccc------CCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhH
Q 011184 211 --SYSTNLAFTPPEYLR------TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 282 (491)
Q Consensus 211 --~~~~t~~y~aPE~~~------~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (491)
...||+.|+|||++. ...++.++|||||||++|+|++|+.||................. ..........+
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~ 237 (330)
T cd05601 160 SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQR--FLKFPEDPKVS 237 (330)
T ss_pred eecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCC--ccCCCCCCCCC
Confidence 235789999999986 45578899999999999999999998865433222111111100 00001112356
Q ss_pred HHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 283 TELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 283 ~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.++.+|+.+||. +|.+|||+.+++.
T Consensus 238 ~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 238 SDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred HHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 789999999998 9999999999986
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-40 Score=320.50 Aligned_cols=235 Identities=17% Similarity=0.255 Sum_probs=193.4
Q ss_pred cccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC---CCChhHHHHHHHHHhccC-CCCcceEEeEeecCCeeEEEEec
Q 011184 60 NIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
+.++.||+|+||+||++.. .+|+.||||++.... ......+..|..++..+. |++|+++++++...+..++||||
T Consensus 3 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey 82 (323)
T cd05615 3 NFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEY 82 (323)
T ss_pred eEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcC
Confidence 4556779999999999994 568999999987532 223456788999998885 57788899999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----CC
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GK 210 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~ 210 (491)
++||+|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++..... ..
T Consensus 83 ~~~g~L~~~i~~--~~~l~~~~~~~i~~qi~~al~~lH~~~-ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~ 159 (323)
T cd05615 83 VNGGDLMYHIQQ--VGKFKEPQAVFYAAEISVGLFFLHRRG-IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTR 159 (323)
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEeccccccccCCCCcccc
Confidence 999999998863 457899999999999999999999999 99999999999999999999999999875322 22
Q ss_pred ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 211 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
...||+.|+|||++.+..++.++|||||||++|+|++|+.|+............... ...++...+.++.+++.
T Consensus 160 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~ 233 (323)
T cd05615 160 TFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEH------NVSYPKSLSKEAVSICK 233 (323)
T ss_pred CccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCccCCHHHHHHHH
Confidence 445899999999999888999999999999999999999988765433222211111 11344556788999999
Q ss_pred HhccCCCCCCCCh
Q 011184 291 RCLQYEPRERPNP 303 (491)
Q Consensus 291 ~cl~~dp~~Rps~ 303 (491)
+||+.+|.+|++.
T Consensus 234 ~~l~~~p~~R~~~ 246 (323)
T cd05615 234 GLMTKHPSKRLGC 246 (323)
T ss_pred HHcccCHhhCCCC
Confidence 9999999999975
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-40 Score=311.37 Aligned_cols=247 Identities=21% Similarity=0.333 Sum_probs=196.8
Q ss_pred ccccccCCCCCccEEEEEEEC------CCCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 59 ENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
+++...+|+|++|.||+|... .+..||||++..... .....+.+|+.+++.++||||+++++++..+...++|
T Consensus 8 ~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv 87 (277)
T cd05062 8 ITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 87 (277)
T ss_pred ceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEE
Confidence 456677799999999998753 246799999864322 2244688999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCc
Q 011184 132 AEYMPNETLAKHLFHWE--------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLM 203 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 203 (491)
|||+++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++
T Consensus 88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~vH~dlkp~Nil~~~~~~~~l~dfg~~ 166 (277)
T cd05062 88 MELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGMT 166 (277)
T ss_pred EecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCcchheEEEcCCCCEEECCCCCc
Confidence 99999999999986421 123577889999999999999999998 999999999999999999999999998
Q ss_pred ccCCCCC------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCC
Q 011184 204 KNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQ 276 (491)
Q Consensus 204 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (491)
....... ...+++.|+|||.+.+..++.++||||||+++|||++ |..|+............... ....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-----~~~~ 241 (277)
T cd05062 167 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEG-----GLLD 241 (277)
T ss_pred cccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-----CcCC
Confidence 7543221 2234678999999998889999999999999999999 56666544332221111111 1112
Q ss_pred CCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhc
Q 011184 277 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 311 (491)
Q Consensus 277 ~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~ 311 (491)
.+...+..+.+++.+||+.||++|||+.++++.|+
T Consensus 242 ~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 242 KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 33455678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-40 Score=307.86 Aligned_cols=245 Identities=16% Similarity=0.207 Sum_probs=203.4
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC-CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
+++++.+|.|+||.||++.. .++..+|+|.++... ....+.+.+|+.+++.++||||+++++++..++..++||||++
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 81 (255)
T cd08219 2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCD 81 (255)
T ss_pred ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCC
Confidence 45678889999999999994 468999999986432 2345678899999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----Ccc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSY 212 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 212 (491)
+++|.+++.......+++.....++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... ...
T Consensus 82 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 160 (255)
T cd08219 82 GGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR-VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTY 160 (255)
T ss_pred CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCcceEEECCCCcEEEcccCcceeecccccccccc
Confidence 999999886544556899999999999999999999998 999999999999999999999999998765432 234
Q ss_pred ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 011184 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 292 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 292 (491)
.+++.|+|||++.+..++.++|+||||+++|+|++|..|+................ ....+...+..+.+++.+|
T Consensus 161 ~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~~ 235 (255)
T cd08219 161 VGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGS-----YKPLPSHYSYELRSLIKQM 235 (255)
T ss_pred cCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCC-----CCCCCcccCHHHHHHHHHH
Confidence 57889999999998889999999999999999999999886544322211111111 1123345667899999999
Q ss_pred ccCCCCCCCChhHHHHH
Q 011184 293 LQYEPRERPNPKSLVTA 309 (491)
Q Consensus 293 l~~dp~~Rps~~~il~~ 309 (491)
|+.||.+|||+.+++..
T Consensus 236 l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 236 FKRNPRSRPSATTILSR 252 (255)
T ss_pred HhCCcccCCCHHHHhhc
Confidence 99999999999999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=327.64 Aligned_cols=245 Identities=13% Similarity=0.130 Sum_probs=195.9
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
.+++++.||+|+||+||++.. .+++.||||++.... ......+..|+.++..++||||+++++.+..++..++|||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E 81 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME 81 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 356677889999999999995 468999999996422 2234568889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 209 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 209 (491)
|++||+|.+++.. ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.++|+|||++......
T Consensus 82 ~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~~L~~lH~~g-ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~ 158 (360)
T cd05627 82 FLPGGDMMTLLMK--KDTLSEEATQFYIAETVLAIDAIHQLG-FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTE 158 (360)
T ss_pred CCCCccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEccCCCHHHEEECCCCCEEEeeccCCcccccccccc
Confidence 9999999999863 457899999999999999999999999 999999999999999999999999997643210
Q ss_pred -----------------------------------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCC
Q 011184 210 -----------------------------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 254 (491)
Q Consensus 210 -----------------------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~ 254 (491)
....||+.|+|||++.+..++.++|||||||++|||++|..||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~ 238 (360)
T cd05627 159 FYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (360)
T ss_pred cccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence 123588999999999988999999999999999999999999876
Q ss_pred chhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCC---hhHHHH
Q 011184 255 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN---PKSLVT 308 (491)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps---~~~il~ 308 (491)
..................... ....+.++.+++.+|+. ||.+|++ +++++.
T Consensus 239 ~~~~~~~~~i~~~~~~~~~p~--~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 239 ETPQETYRKVMNWKETLVFPP--EVPISEKAKDLILRFCT-DSENRIGSNGVEEIKS 292 (360)
T ss_pred CCHHHHHHHHHcCCCceecCC--CCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhc
Confidence 543322221111000000000 11245789999999875 9999985 566665
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=333.60 Aligned_cols=246 Identities=22% Similarity=0.286 Sum_probs=190.9
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecC--------Cee
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--------DER 128 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--------~~~ 128 (491)
.|.+++.||+|+||+||+|.. .+++.||||++... .....+|+.+++.++||||+++++++... ...
T Consensus 67 ~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~----~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 142 (440)
T PTZ00036 67 SYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD----PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFL 142 (440)
T ss_pred eEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC----cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEE
Confidence 477788889999999999995 56899999998543 23456799999999999999999886432 246
Q ss_pred EEEEecCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC-CeEEccCCCccc
Q 011184 129 LLVAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKN 205 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~ 205 (491)
++||||++ ++|.+++... ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++.
T Consensus 143 ~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~-IiHrDLKp~NILl~~~~~~vkL~DFGla~~ 220 (440)
T PTZ00036 143 NVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF-ICHRDLKPQNLLIDPNTHTLKLCDFGSAKN 220 (440)
T ss_pred EEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCcCHHHEEEcCCCCceeeeccccchh
Confidence 79999998 5777766431 3457899999999999999999999999 99999999999998654 799999999986
Q ss_pred CCCC---CccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccc---------------
Q 011184 206 SRDG---KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--------------- 266 (491)
Q Consensus 206 ~~~~---~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~--------------- 266 (491)
.... ....+|+.|+|||++.+. .++.++|||||||++|||++|.+||.+............
T Consensus 221 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~ 300 (440)
T PTZ00036 221 LLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNP 300 (440)
T ss_pred ccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhch
Confidence 5332 345678999999998764 589999999999999999999988876432111000000
Q ss_pred --------ccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 267 --------MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 267 --------~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
.+....+...++...+.++.+|+.+||+.||.+|||+.+++..
T Consensus 301 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 301 NYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred hhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 0000011112334456789999999999999999999999863
|
|
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-40 Score=319.36 Aligned_cols=232 Identities=21% Similarity=0.246 Sum_probs=189.4
Q ss_pred cCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC---CChhHHHHHHH-HHhccCCCCcceEEeEeecCCeeEEEEecCCCC
Q 011184 64 EHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEAR-SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 138 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~g 138 (491)
.||+|+||.||++.. .+++.||+|++..... .....+..|.. +++.++||||+++++++...+..++||||++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGG 81 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 569999999999995 4588999999864321 12334555554 678889999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----CCcccc
Q 011184 139 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYST 214 (491)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 214 (491)
+|..++.. ...+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++..... .....|
T Consensus 82 ~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (321)
T cd05603 82 ELFFHLQR--ERCFLEPRARFYAAEVASAIGYLHSLN-IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCG 158 (321)
T ss_pred CHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccC
Confidence 99988863 456888999999999999999999998 99999999999999999999999999875322 223468
Q ss_pred CCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhcc
Q 011184 215 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 294 (491)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 294 (491)
|+.|+|||++.+..++.++|||||||++|||++|..||............... ...++...+..+.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l~ 232 (321)
T cd05603 159 TPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK------PLQLPGGKTVAACDLLVGLLH 232 (321)
T ss_pred CcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHHHHHcc
Confidence 89999999999888999999999999999999999998765433322222111 112344566789999999999
Q ss_pred CCCCCCCChh
Q 011184 295 YEPRERPNPK 304 (491)
Q Consensus 295 ~dp~~Rps~~ 304 (491)
.||.+||+..
T Consensus 233 ~~p~~R~~~~ 242 (321)
T cd05603 233 KDQRRRLGAK 242 (321)
T ss_pred CCHhhcCCCC
Confidence 9999999764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-40 Score=311.67 Aligned_cols=245 Identities=16% Similarity=0.199 Sum_probs=198.8
Q ss_pred ccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCC
Q 011184 59 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 137 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~ 137 (491)
+++++.||.|+||.||++... ++..+++|.+..........+.+|+++++.++||||+++++++..++..++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 466788999999999999954 5788899998765544456788999999999999999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----Cccc
Q 011184 138 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYS 213 (491)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~ 213 (491)
++|..++.. ...++++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....
T Consensus 87 ~~l~~~~~~-~~~~l~~~~~~~~~~qi~~~L~~LH~~~-i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 164 (282)
T cd06643 87 GAVDAVMLE-LERPLTEPQIRVVCKQTLEALNYLHENK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI 164 (282)
T ss_pred CcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCcccEEEccCCCEEEcccccccccccccccccccc
Confidence 999988754 3457899999999999999999999999 999999999999999999999999998654322 2345
Q ss_pred cCCCCCCccccc-----CCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHH
Q 011184 214 TNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 288 (491)
Q Consensus 214 ~t~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (491)
++..|+|||++. +..++.++|||||||++|+|++|+.|+................. .....+..++.++.++
T Consensus 165 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l 241 (282)
T cd06643 165 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEP---PTLAQPSRWSSEFKDF 241 (282)
T ss_pred ccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCC---CCCCCccccCHHHHHH
Confidence 788999999984 34578899999999999999999988754322111111111100 0111233456789999
Q ss_pred HHHhccCCCCCCCChhHHHH
Q 011184 289 ASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~ 308 (491)
+.+||+.||.+||++.++++
T Consensus 242 i~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 242 LKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred HHHHccCChhhCcCHHHHhc
Confidence 99999999999999999987
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-40 Score=312.85 Aligned_cols=248 Identities=16% Similarity=0.199 Sum_probs=193.1
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhcc---CCCCcceEEeEeec-----CCe
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQL---RNNRLTNLLGCCCE-----GDE 127 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~H~niv~~~~~~~~-----~~~ 127 (491)
|++++.||+|+||+||++.. .+++.||+|.++..... ....+.+|+.+++.+ +||||+++++++.. ...
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~ 81 (288)
T cd07863 2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK 81 (288)
T ss_pred ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence 56678889999999999994 46899999998753322 234566788887766 69999999998864 245
Q ss_pred eEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC
Q 011184 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 207 (491)
Q Consensus 128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 207 (491)
.++||||++ ++|.+++.......+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++....
T Consensus 82 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dikp~Nili~~~~~~kl~dfg~~~~~~ 159 (288)
T cd07863 82 VTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGQVKLADFGLARIYS 159 (288)
T ss_pred EEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECccCcccccc
Confidence 799999998 58988886544456899999999999999999999999 9999999999999999999999999987654
Q ss_pred CC---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccc--------c------cc
Q 011184 208 DG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM--------L------TD 270 (491)
Q Consensus 208 ~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~--------~------~~ 270 (491)
.. ....+|..|+|||++.+..++.++|||||||++|+|++|.+||............... . ..
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T cd07863 160 CQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPR 239 (288)
T ss_pred CcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccc
Confidence 32 2345788999999999888999999999999999999999887544221111000000 0 00
Q ss_pred ccc-------cCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 271 SCL-------EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 271 ~~~-------~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
... ........+..+.+++.+||+.||++|||+.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 240 GAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred cccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000 00112345678899999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=304.84 Aligned_cols=242 Identities=30% Similarity=0.424 Sum_probs=201.9
Q ss_pred cCCCCCccEEEEEEEC-C---CCEEEEEEeCCCCCCC-hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCC
Q 011184 64 EHGEKAPNVVYKGKLE-N---QRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 138 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~g 138 (491)
.||.|+||.||++... . +..|++|.++...... ...+.+|++++..++|+||+++++++......++||||++++
T Consensus 2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (262)
T cd00192 2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGG 81 (262)
T ss_pred ccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCC
Confidence 4699999999999954 3 7899999997654333 578999999999999999999999999999999999999999
Q ss_pred CHHHHhcccC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC--
Q 011184 139 TLAKHLFHWE-------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 139 sL~~~l~~~~-------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 209 (491)
+|.+++.... ...+++..++.++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||.+......
T Consensus 82 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~ 160 (262)
T cd00192 82 DLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK-FVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY 160 (262)
T ss_pred cHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC-cccCccCcceEEECCCCcEEEcccccccccccccc
Confidence 9999997531 367899999999999999999999998 999999999999999999999999998865542
Q ss_pred ----CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHH
Q 011184 210 ----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 284 (491)
Q Consensus 210 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (491)
....++..|+|||.+....++.++||||||+++++|++ |..|+.......+...... ......+..++.+
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 235 (262)
T cd00192 161 YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK-----GYRLPKPEYCPDE 235 (262)
T ss_pred cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-----CCCCCCCccCChH
Confidence 23346788999999988889999999999999999999 5777765433222221111 1122334556789
Q ss_pred HHHHHHHhccCCCCCCCChhHHHHHhc
Q 011184 285 LVRLASRCLQYEPRERPNPKSLVTALS 311 (491)
Q Consensus 285 ~~~li~~cl~~dp~~Rps~~~il~~L~ 311 (491)
+.+++.+||..+|.+|||+.+++..|+
T Consensus 236 ~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 236 LYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred HHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=312.39 Aligned_cols=251 Identities=20% Similarity=0.281 Sum_probs=201.8
Q ss_pred ccccccCCCCCccEEEEEEEC------CCCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 59 ENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
+++...||+|+||.||+|+.. ....+++|.+..... .....+.+|+.+++.++||||+++++.+...+..++|
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI 81 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence 355677899999999999842 235688998865432 1245788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccC----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceee
Q 011184 132 AEYMPNETLAKHLFHWE----------------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 189 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill 189 (491)
|||+++++|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+|||+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-ivH~dikp~nill 160 (290)
T cd05045 82 VEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK-LVHRDLAARNVLV 160 (290)
T ss_pred EEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC-eehhhhhhheEEE
Confidence 99999999999885321 135788999999999999999999998 9999999999999
Q ss_pred CCCCCeEEccCCCcccCCCCC------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhh
Q 011184 190 DEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRD 262 (491)
Q Consensus 190 ~~~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~ 262 (491)
++++.+||+|||+++...... ...++..|+|||.+.+..++.++||||||+++++|++ |..|+.......+..
T Consensus 161 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~ 240 (290)
T cd05045 161 AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFN 240 (290)
T ss_pred cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 999999999999987543221 2234678999999988889999999999999999998 887776543332222
Q ss_pred ccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 263 RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
.... ......+...+.++.+++.+||+.+|++||++.++++.|+.+..
T Consensus 241 ~~~~-----~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 241 LLKT-----GYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred HHhC-----CCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 1111 11122344566789999999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-40 Score=316.55 Aligned_cols=252 Identities=21% Similarity=0.294 Sum_probs=202.5
Q ss_pred cccccccCCCCCccEEEEEEEC--------CCCEEEEEEeCCCC-CCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCe
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE--------NQRRIAVKRFNRMA-WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDE 127 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~ 127 (491)
.+.+...||+|+||.||++... ++..||+|.+.... ......+.+|+.+++.+ +||||+++++++...+.
T Consensus 16 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 95 (304)
T cd05101 16 KLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 95 (304)
T ss_pred HeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCc
Confidence 4566788899999999999731 24579999986432 22346788999999999 89999999999999999
Q ss_pred eEEEEecCCCCCHHHHhcccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC
Q 011184 128 RLLVAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 193 (491)
Q Consensus 128 ~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~ 193 (491)
.++||||+++++|.+++.... ...+++..+..++.||+.||.|||+++ ++||||||+||+++.++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g-ivH~dlkp~Nili~~~~ 174 (304)
T cd05101 96 LYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK-CIHRDLAARNVLVTENN 174 (304)
T ss_pred eEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC-eeecccccceEEEcCCC
Confidence 999999999999999986431 134788889999999999999999999 99999999999999999
Q ss_pred CeEEccCCCcccCCCCC------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhcccc
Q 011184 194 NPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQ 266 (491)
Q Consensus 194 ~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~ 266 (491)
.+||+|||+++...... ...+++.|+|||++.+..++.++||||||+++|+|++ |..|+.......+......
T Consensus 175 ~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 254 (304)
T cd05101 175 VMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 254 (304)
T ss_pred cEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHc
Confidence 99999999987654321 2234567999999988889999999999999999998 6666655433332221111
Q ss_pred ccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 267 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
. .....+...+..+.+++.+||+.+|.+|||+.++++.|+.+..
T Consensus 255 ~-----~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~ 298 (304)
T cd05101 255 G-----HRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298 (304)
T ss_pred C-----CcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence 1 1112344566889999999999999999999999999987754
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=306.45 Aligned_cols=246 Identities=21% Similarity=0.247 Sum_probs=189.8
Q ss_pred cCCCCCccEEEEEEECC---CCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCC
Q 011184 64 EHGEKAPNVVYKGKLEN---QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 139 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gs 139 (491)
.||+|+||.||+|...+ +..+|+|.++..... ....+.+|+.++++++||||+++++++......++||||+++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 57999999999998533 457999998654422 23478899999999999999999999999889999999999999
Q ss_pred HHHHhcccC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC------C
Q 011184 140 LAKHLFHWE---THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------K 210 (491)
Q Consensus 140 L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------~ 210 (491)
|.+++.... ....++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... .
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~ 160 (269)
T cd05087 82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN-FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPD 160 (269)
T ss_pred HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC-EeccccCcceEEEcCCCcEEECCccccccccCcceeecCC
Confidence 999986422 224567788899999999999999998 999999999999999999999999998653322 1
Q ss_pred ccccCCCCCCcccccCC-------CCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhH
Q 011184 211 SYSTNLAFTPPEYLRTG-------RVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 282 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~-------~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (491)
...++..|+|||++.+. .++.++||||||+++|||++ |..|+.............................+
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (269)
T cd05087 161 QLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLS 240 (269)
T ss_pred CcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCC
Confidence 23456789999998642 35789999999999999996 98887543322211111111111111122223455
Q ss_pred HHHHHHHHHhccCCCCCCCChhHHHHHhc
Q 011184 283 TELVRLASRCLQYEPRERPNPKSLVTALS 311 (491)
Q Consensus 283 ~~~~~li~~cl~~dp~~Rps~~~il~~L~ 311 (491)
..+.+++..|| .+|++|||+++|+..|.
T Consensus 241 ~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 241 DRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred hHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 78899999999 68999999999998774
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=305.50 Aligned_cols=242 Identities=21% Similarity=0.291 Sum_probs=197.2
Q ss_pred cCCCCCccEEEEEEECC--C--CEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCC
Q 011184 64 EHGEKAPNVVYKGKLEN--Q--RRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 138 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~g 138 (491)
.+|+|++|+||+|.+.+ + ..||||.+..... ...+.+.+|+.++++++||||+++++++.. ...++||||++++
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~ 80 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLG 80 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCC
Confidence 46999999999999533 3 3689999977654 345679999999999999999999999988 8899999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-------Cc
Q 011184 139 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-------KS 211 (491)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-------~~ 211 (491)
+|.+++.......+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++...... ..
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 159 (257)
T cd05040 81 SLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR-FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEH 159 (257)
T ss_pred cHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC-ccccccCcccEEEecCCEEEeccccccccccccccceecccC
Confidence 9999997533256899999999999999999999998 999999999999999999999999998765432 12
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
..++..|+|||.+.+..++.++||||||+++|+|++ |..|+.............. .......+...+..+.+++.
T Consensus 160 ~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~ 235 (257)
T cd05040 160 LKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDK----EGERLERPEACPQDIYNVML 235 (257)
T ss_pred CCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh----cCCcCCCCccCCHHHHHHHH
Confidence 345678999999998889999999999999999999 8887754322221111111 01111123345678999999
Q ss_pred HhccCCCCCCCChhHHHHHhc
Q 011184 291 RCLQYEPRERPNPKSLVTALS 311 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~L~ 311 (491)
+||+.+|++|||+.++++.|.
T Consensus 236 ~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 236 QCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred HHCCCCcccCCCHHHHHHHhc
Confidence 999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=305.89 Aligned_cols=251 Identities=20% Similarity=0.265 Sum_probs=204.2
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCC---CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
.+.+.+.+|.|++|.||+|... +|+.||+|.++.... .....+.+|++++++++|+||+++++++..++..++|||
T Consensus 3 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 82 (267)
T cd08224 3 NFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLE 82 (267)
T ss_pred ceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEe
Confidence 3455667799999999999965 789999999864222 225578999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC--
Q 011184 134 YMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 134 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 209 (491)
|+++++|.+++... ....+++..+..++.+++.||.|||+.+ ++||||+|+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~ 161 (267)
T cd08224 83 LADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR-IMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT 161 (267)
T ss_pred cCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC-EecCCcChhhEEECCCCcEEEeccceeeeccCCCc
Confidence 99999999988642 2345889999999999999999999999 999999999999999999999999998754332
Q ss_pred --CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhH--hhhccccccccccccCCCCc-hhHHH
Q 011184 210 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL--IRDRNLQMLTDSCLEGQFTD-DDGTE 284 (491)
Q Consensus 210 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~ 284 (491)
....++..|+|||.+.+..++.++||||||+++|+|++|+.|+....... ........ .....+. ..+..
T Consensus 162 ~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 236 (267)
T cd08224 162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKC-----DYPPLPADHYSEE 236 (267)
T ss_pred ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcC-----CCCCCChhhcCHH
Confidence 23457888999999988889999999999999999999998875432211 11111111 1111222 45678
Q ss_pred HHHHHHHhccCCCCCCCChhHHHHHhcccc
Q 011184 285 LVRLASRCLQYEPRERPNPKSLVTALSPLQ 314 (491)
Q Consensus 285 ~~~li~~cl~~dp~~Rps~~~il~~L~~~~ 314 (491)
+.+++.+||..+|++|||+.+|++.|+.+.
T Consensus 237 ~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 237 LRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred HHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 999999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=307.83 Aligned_cols=246 Identities=20% Similarity=0.261 Sum_probs=188.1
Q ss_pred cCCCCCccEEEEEEECC---CCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCC
Q 011184 64 EHGEKAPNVVYKGKLEN---QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 139 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gs 139 (491)
+||+|+||.||+|...+ ...+++|.+...... ....+.+|+.+++.++||||+++++.+...+..++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 57999999999997433 356888887643322 23568899999999999999999999999999999999999999
Q ss_pred HHHHhcccCC---CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC------C
Q 011184 140 LAKHLFHWET---HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------K 210 (491)
Q Consensus 140 L~~~l~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------~ 210 (491)
|.+++..... ...++.....++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++...... .
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~ 160 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD-FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKD 160 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC-EecccccHhheEecCCCcEEEeccccccccccchheeccC
Confidence 9999864321 23467788999999999999999998 999999999999999999999999998653221 1
Q ss_pred ccccCCCCCCcccccC-------CCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhH
Q 011184 211 SYSTNLAFTPPEYLRT-------GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 282 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~-------~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (491)
...+++.|+|||++.. ..++.++|||||||++|||++ |..|+.........................+...+
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (269)
T cd05042 161 CHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYS 240 (269)
T ss_pred CCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCC
Confidence 2234667999998743 346889999999999999999 56665543222111111111111111223344566
Q ss_pred HHHHHHHHHhccCCCCCCCChhHHHHHhc
Q 011184 283 TELVRLASRCLQYEPRERPNPKSLVTALS 311 (491)
Q Consensus 283 ~~~~~li~~cl~~dp~~Rps~~~il~~L~ 311 (491)
..+..++..|| .||++|||+++|++.|.
T Consensus 241 ~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 241 DRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred HHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 78899999999 59999999999999763
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-41 Score=325.75 Aligned_cols=248 Identities=18% Similarity=0.210 Sum_probs=203.9
Q ss_pred ccccccccCCCCCccEEEEEEECC-CCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLEN-QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
+..+||++||.|+||.||++..+. +-..|.|++........++|+-|++||..++||+||++++.|...+.+||+.|||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence 346889999999999999999544 5556789887766667889999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC----CCCc
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR----DGKS 211 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~----~~~~ 211 (491)
.||-....+.. -...+++.++..+++|++.||.|||+++ |||||||..|||++-+|.++|+|||.+.... ...+
T Consensus 112 ~GGAVDaimlE-L~r~LtE~QIqvvc~q~ldALn~LHs~~-iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDs 189 (1187)
T KOG0579|consen 112 GGGAVDAIMLE-LGRVLTEDQIQVVCYQVLDALNWLHSQN-IIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDS 189 (1187)
T ss_pred CCchHhHHHHH-hccccchHHHHHHHHHHHHHHHHHhhcc-hhhhhccccceEEEecCcEeeecccccccchhHHhhhcc
Confidence 99999887765 3578999999999999999999999998 9999999999999999999999999865432 2347
Q ss_pred cccCCCCCCccccc-----CCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHH
Q 011184 212 YSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 212 ~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
+.||+.|||||+.. ..+|+.++||||||++|.||..+.+|-.....-.+.-.....-+ +...-|..++..+.
T Consensus 190 FIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSeP---PTLlqPS~Ws~~F~ 266 (1187)
T KOG0579|consen 190 FIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEP---PTLLQPSHWSRSFS 266 (1187)
T ss_pred ccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCC---CcccCcchhhhHHH
Confidence 88999999999875 45699999999999999999999966433221111111111111 11123556778999
Q ss_pred HHHHHhccCCCCCCCChhHHHHH
Q 011184 287 RLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~ 309 (491)
+|+.+||.+||..||++.++++.
T Consensus 267 DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 267 DFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred HHHHHHHhcCCccCCCHHHHhhC
Confidence 99999999999999999998863
|
|
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-39 Score=306.36 Aligned_cols=248 Identities=22% Similarity=0.327 Sum_probs=198.3
Q ss_pred cccccCCCCCccEEEEEEEC-C---CCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecCCe------
Q 011184 60 NIVSEHGEKAPNVVYKGKLE-N---QRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE------ 127 (491)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~------ 127 (491)
.+.+.+|+|+||.||+|... + +..||||.++..... ....+.+|++.++.++||||+++++++.....
T Consensus 2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 81 (273)
T cd05035 2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPK 81 (273)
T ss_pred ccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcc
Confidence 45677899999999999853 2 367999998754322 23578999999999999999999998876554
Q ss_pred eEEEEecCCCCCHHHHhccc----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCc
Q 011184 128 RLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLM 203 (491)
Q Consensus 128 ~~lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 203 (491)
.++||||+++++|..++... ....+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||++
T Consensus 82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~ 160 (273)
T cd05035 82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN-FIHRDLAARNCMLREDMTVCVADFGLS 160 (273)
T ss_pred cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-eeccccchheEEECCCCeEEECCccce
Confidence 79999999999999988532 1236889999999999999999999998 999999999999999999999999998
Q ss_pred ccCCCCC------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCC
Q 011184 204 KNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQ 276 (491)
Q Consensus 204 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (491)
+...... ....+..|+|||.+.+..++.++||||||+++|||++ |..|+.......+....... ....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~ 235 (273)
T cd05035 161 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHG-----NRLK 235 (273)
T ss_pred eeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCC
Confidence 7654322 1234568999999988889999999999999999999 77666543322221111111 1122
Q ss_pred CCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccc
Q 011184 277 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 277 ~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~ 313 (491)
.+...+..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 236 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 236 QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 3455678999999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=312.60 Aligned_cols=250 Identities=23% Similarity=0.311 Sum_probs=201.5
Q ss_pred ccccccCCCCCccEEEEEEEC------CCCEEEEEEeCCCCC-CChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEE
Q 011184 59 ENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~l 130 (491)
++++..||+|++|.||++... ....+|+|.+..... .....+.+|++++.++ +||||+++++++..++..++
T Consensus 14 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 93 (293)
T cd05053 14 LTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYV 93 (293)
T ss_pred eEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEE
Confidence 456677899999999999853 236799999875332 2234688999999999 89999999999999999999
Q ss_pred EEecCCCCCHHHHhccc--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeE
Q 011184 131 VAEYMPNETLAKHLFHW--------------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPR 196 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~k 196 (491)
||||+++++|..++... ....+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+|
T Consensus 94 i~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivH~dlkp~Nil~~~~~~~k 172 (293)
T cd05053 94 VVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK-CIHRDLAARNVLVTEDHVMK 172 (293)
T ss_pred EEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC-ccccccceeeEEEcCCCeEE
Confidence 99999999999998532 2356889999999999999999999998 99999999999999999999
Q ss_pred EccCCCcccCCCCC------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccc
Q 011184 197 LSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLT 269 (491)
Q Consensus 197 l~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~ 269 (491)
|+|||+++...... ...++..|+|||.+.+..++.++|||||||++|+|++ |..|++..............
T Consensus 173 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-- 250 (293)
T cd05053 173 IADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEG-- 250 (293)
T ss_pred eCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcC--
Confidence 99999987654321 1224567999999988889999999999999999998 87777654332222111111
Q ss_pred cccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccc
Q 011184 270 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 314 (491)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~ 314 (491)
.....+...+..+.+|+.+||..||++|||+.++++.|+.+.
T Consensus 251 ---~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 251 ---YRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred ---CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 111234455678999999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=315.30 Aligned_cols=250 Identities=18% Similarity=0.303 Sum_probs=197.4
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
...|.+++.||+|+||+||+|+. .+++.||+|.++..... ....+.+|++++++++||||+++++++..++..++|||
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 84 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFE 84 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEe
Confidence 34578888999999999999995 45889999998754322 34467899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 209 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 209 (491)
|++ ++|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 85 ~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 161 (309)
T cd07872 85 YLD-KDLKQYMDD-CGNIMSMHNVKIFLYQILRGLAYCHRRK-VLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTY 161 (309)
T ss_pred CCC-CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECccccceecCCCcccc
Confidence 997 588888754 2345788999999999999999999999 999999999999999999999999998754322
Q ss_pred CccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccc-----------c------ccc
Q 011184 210 KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM-----------L------TDS 271 (491)
Q Consensus 210 ~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~-----------~------~~~ 271 (491)
....+++.|+|||.+.+ ..++.++||||||+++|+|+||+.||............... + .+.
T Consensus 162 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
T cd07872 162 SNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNY 241 (309)
T ss_pred ccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhh
Confidence 23356889999998865 45889999999999999999999888654322111100000 0 000
Q ss_pred cccC-------CCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 272 CLEG-------QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 272 ~~~~-------~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.... .....++.++.+++.+||+.||.+|||+.+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 242 NFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 0000 011235678999999999999999999999987
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=315.04 Aligned_cols=253 Identities=21% Similarity=0.299 Sum_probs=203.7
Q ss_pred cccccccCCCCCccEEEEEEEC--------CCCEEEEEEeCCCCC-CChhHHHHHHHHHhcc-CCCCcceEEeEeecCCe
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE--------NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDE 127 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~ 127 (491)
.+.+.+.||+|+||.||++... ++..+|+|.++.... .....+.+|+.++..+ +||||+++++++...+.
T Consensus 19 ~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 98 (307)
T cd05098 19 RLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGP 98 (307)
T ss_pred HeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCc
Confidence 4677788899999999999742 234699999975432 2345688899999999 79999999999999999
Q ss_pred eEEEEecCCCCCHHHHhcccCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC
Q 011184 128 RLLVAEYMPNETLAKHLFHWET--------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 193 (491)
Q Consensus 128 ~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~ 193 (491)
.++||||+++++|.+++..... ..+++..++.++.|++.||.|||+.+ ++||||||+||+++.++
T Consensus 99 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g-i~H~dlkp~Nill~~~~ 177 (307)
T cd05098 99 LYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTEDN 177 (307)
T ss_pred eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC-cccccccHHheEEcCCC
Confidence 9999999999999999964321 24788999999999999999999998 99999999999999999
Q ss_pred CeEEccCCCcccCCCCC------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhcccc
Q 011184 194 NPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQ 266 (491)
Q Consensus 194 ~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~ 266 (491)
.++|+|||++....... ...+++.|+|||.+.+..++.++|||||||++|+|++ |..|+.......+......
T Consensus 178 ~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 257 (307)
T cd05098 178 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 257 (307)
T ss_pred cEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHc
Confidence 99999999987543211 1223467999999988889999999999999999998 7777655433322211111
Q ss_pred ccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 267 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
......+...+.++.+++.+||..+|.+|||+.++++.|+.+...
T Consensus 258 -----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 258 -----GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred -----CCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 111223445668999999999999999999999999999887653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-40 Score=320.92 Aligned_cols=236 Identities=19% Similarity=0.256 Sum_probs=190.9
Q ss_pred cCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC---CChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEEecCCCC
Q 011184 64 EHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPNE 138 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~g 138 (491)
.||+|+||.||++.. .+++.||||+++.... .....+.+|+.++.++ +||||+.+++++...+..++||||++||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGG 81 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence 469999999999995 4688999999975432 2245678899999888 6999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----CCcccc
Q 011184 139 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYST 214 (491)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~ 214 (491)
+|..++.. .+.+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~~--~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (327)
T cd05617 82 DLMFHMQR--QRKLPEEHARFYAAEICIALNFLHERG-IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCG 158 (327)
T ss_pred cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccC
Confidence 99988863 457999999999999999999999999 99999999999999999999999999875321 234568
Q ss_pred CCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhH---hhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 215 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL---IRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
|+.|+|||++.+..++.++|||||||++|+|++|..||....... ........+.. ....++...+..+.+++.+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~~li~~ 236 (327)
T cd05617 159 TPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILE--KPIRIPRFLSVKASHVLKG 236 (327)
T ss_pred CcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHh--CCCCCCCCCCHHHHHHHHH
Confidence 999999999998899999999999999999999999884321100 00000011111 1123455567889999999
Q ss_pred hccCCCCCCCChh
Q 011184 292 CLQYEPRERPNPK 304 (491)
Q Consensus 292 cl~~dp~~Rps~~ 304 (491)
||+.||.+|+++.
T Consensus 237 ~L~~dP~~R~~~~ 249 (327)
T cd05617 237 FLNKDPKERLGCQ 249 (327)
T ss_pred HhccCHHHcCCCC
Confidence 9999999999853
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=311.02 Aligned_cols=252 Identities=19% Similarity=0.330 Sum_probs=198.3
Q ss_pred ccccccCCCCCccEEEEEEE-----CCCCEEEEEEeCCCC-CCChhHHHHHHHHHhccCCCCcceEEeEeecC--CeeEE
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-----ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLL 130 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--~~~~l 130 (491)
+.+++.||+|+||.||++.. .++..||+|.++... ......+.+|+++++.++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (284)
T cd05079 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 85 (284)
T ss_pred hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEE
Confidence 46678889999999999974 247889999987543 22345789999999999999999999998775 56899
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 210 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 210 (491)
||||++|++|.+++.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 86 v~e~~~g~~L~~~l~~-~~~~~~~~~~~~i~~~i~~aL~~lH~~g-i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~ 163 (284)
T cd05079 86 IMEFLPSGSLKEYLPR-NKNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 163 (284)
T ss_pred EEEccCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccchheEEEcCCCCEEECCCccccccccCc
Confidence 9999999999999864 2346899999999999999999999999 9999999999999999999999999987643321
Q ss_pred -------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhh-----------hcccccccccc
Q 011184 211 -------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR-----------DRNLQMLTDSC 272 (491)
Q Consensus 211 -------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~-----------~~~~~~~~~~~ 272 (491)
...++..|+|||.+.+..++.++||||||+++|+|++++.|.......... ......+...
T Consensus 164 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 242 (284)
T cd05079 164 EYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEG- 242 (284)
T ss_pred cceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcC-
Confidence 234566799999998888999999999999999999987543221100000 0000000000
Q ss_pred ccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccc
Q 011184 273 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 273 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~ 313 (491)
.....+..++..+.+|+.+||+.+|++|||+.++++.|+.+
T Consensus 243 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 243 KRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred ccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 01112345678999999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=308.63 Aligned_cols=251 Identities=19% Similarity=0.257 Sum_probs=199.4
Q ss_pred cccccccCCCCCccEEEEEEE-CCCC----EEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQR----RIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
+++++..||.|+||+||+|.+ .++. .||+|.++..... ....+.+|+.++..++||||+++++++.. ...+++
T Consensus 8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~ 86 (279)
T cd05109 8 ELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLV 86 (279)
T ss_pred heeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEE
Confidence 356677889999999999984 4454 4899998654322 24578899999999999999999999875 457899
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 210 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 210 (491)
+||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||+++++.+||+|||+++......
T Consensus 87 ~~~~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~ 164 (279)
T cd05109 87 TQLMPYGCLLDYVRE-NKDRIGSQDLLNWCVQIAKGMSYLEEVR-LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET 164 (279)
T ss_pred EEcCCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccccceEEEcCCCcEEECCCCceeecccccc
Confidence 999999999999864 2356899999999999999999999998 9999999999999999999999999987654321
Q ss_pred -----ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHH
Q 011184 211 -----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 284 (491)
Q Consensus 211 -----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (491)
...++..|+|||.+.+..++.++||||||+++|||++ |..|+.............. ......+...+.+
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 239 (279)
T cd05109 165 EYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEK-----GERLPQPPICTID 239 (279)
T ss_pred eeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-----CCcCCCCccCCHH
Confidence 1223567999999988889999999999999999998 7777654332221111111 1111223345678
Q ss_pred HHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 285 LVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 285 ~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
+.+++.+||..||+.||++.+++..|..+...
T Consensus 240 ~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 240 VYMIMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 99999999999999999999999998877554
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=313.83 Aligned_cols=250 Identities=20% Similarity=0.305 Sum_probs=199.9
Q ss_pred ccccccCCCCCccEEEEEEE-C-----CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEE
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-E-----NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~l 130 (491)
+.+...||+|+||.||++.. . .+..||||.++..... ..+.+.+|+.+++++ +||||+++++++...+..++
T Consensus 37 ~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 116 (302)
T cd05055 37 LSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILV 116 (302)
T ss_pred eEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEE
Confidence 45566779999999999973 1 2457999998754322 245688999999999 79999999999999999999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 210 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 210 (491)
||||+++++|.+++.......+++.++..++.|++.||.|||+.+ ++|+||||+|||++.++.++|+|||++.......
T Consensus 117 v~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~ 195 (302)
T cd05055 117 ITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNVLLTHGKIVKICDFGLARDIMNDS 195 (302)
T ss_pred EEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eehhhhccceEEEcCCCeEEECCCcccccccCCC
Confidence 999999999999996533344899999999999999999999998 9999999999999999999999999987543322
Q ss_pred ------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHH
Q 011184 211 ------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 283 (491)
Q Consensus 211 ------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (491)
...++..|+|||.+.+..++.++|||||||++|+|++ |..|+............ .........+...+.
T Consensus 196 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 271 (302)
T cd05055 196 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKL----IKEGYRMAQPEHAPA 271 (302)
T ss_pred ceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHH----HHcCCcCCCCCCCCH
Confidence 1234678999999998889999999999999999998 88776543321111000 011111122334567
Q ss_pred HHHHHHHHhccCCCCCCCChhHHHHHhccc
Q 011184 284 ELVRLASRCLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 284 ~~~~li~~cl~~dp~~Rps~~~il~~L~~~ 313 (491)
.+.+++.+||..+|++|||+.++++.|+.+
T Consensus 272 ~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 272 EIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred HHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=309.07 Aligned_cols=248 Identities=23% Similarity=0.362 Sum_probs=200.6
Q ss_pred cccccccCCCCCccEEEEEEECC------CCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLEN------QRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
.+.+++.||.|+||.||++...+ +..||+|.+..... .....+.+|+.++..++||||+++++++......++
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~ 86 (277)
T cd05032 7 KITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLV 86 (277)
T ss_pred HeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEE
Confidence 45667888999999999998532 36899999865432 224568899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhcccC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCC
Q 011184 131 VAEYMPNETLAKHLFHWE--------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 202 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 202 (491)
||||+++++|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~di~p~nill~~~~~~kl~dfg~ 165 (277)
T cd05032 87 VMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK-FVHRDLAARNCMVAEDLTVKIGDFGM 165 (277)
T ss_pred EEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccChheEEEcCCCCEEECCccc
Confidence 999999999999986422 124678899999999999999999998 99999999999999999999999999
Q ss_pred cccCCCC------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccC
Q 011184 203 MKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEG 275 (491)
Q Consensus 203 a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (491)
++..... ....++..|+|||.+.+..++.++||||||+++||+++ |..|+............. . ....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~----~-~~~~ 240 (277)
T cd05032 166 TRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI----D-GGHL 240 (277)
T ss_pred chhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHh----c-CCCC
Confidence 8754322 22345678999999988889999999999999999998 887775543322221111 1 1112
Q ss_pred CCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhc
Q 011184 276 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 311 (491)
Q Consensus 276 ~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~ 311 (491)
..+...+..+.+++.+||+.+|++|||+.++++.|+
T Consensus 241 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 241 DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 234455789999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=310.60 Aligned_cols=245 Identities=20% Similarity=0.278 Sum_probs=203.6
Q ss_pred ccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 57 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
..+.++..+|.|++|+||++. ..+++.|++|.+..........+.+|+.+++.++||||+++++++..++..++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 347778888999999999999 4568999999997655555677899999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----Cc
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 211 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 211 (491)
++++|.+++. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ..
T Consensus 99 ~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~~-i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 174 (296)
T cd06655 99 AGGSLTDVVT---ETCMDEAQIAAVCRECLQALEFLHANQ-VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRST 174 (296)
T ss_pred CCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEccCccchhcccccccCCC
Confidence 9999999885 346899999999999999999999999 999999999999999999999999987754332 23
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
..++..|+|||.+.+..++.++|||||||++|+|++|+.||.............. ........+...+..+.+++.+
T Consensus 175 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~ 251 (296)
T cd06655 175 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT---NGTPELQNPEKLSPIFRDFLNR 251 (296)
T ss_pred cCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---cCCcccCCcccCCHHHHHHHHH
Confidence 4577899999999988899999999999999999999988865432111100000 0111112344566789999999
Q ss_pred hccCCCCCCCChhHHHH
Q 011184 292 CLQYEPRERPNPKSLVT 308 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~ 308 (491)
||..||.+||++.+++.
T Consensus 252 ~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 252 CLEMDVEKRGSAKELLQ 268 (296)
T ss_pred HhhcChhhCCCHHHHhh
Confidence 99999999999999997
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=307.72 Aligned_cols=246 Identities=17% Similarity=0.189 Sum_probs=197.7
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
.+.++..||.|+||.||++.. .+++.||+|.++.........+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 10 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~ 89 (267)
T cd06645 10 DFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCG 89 (267)
T ss_pred HHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccC
Confidence 455667789999999999994 5689999999876554445678899999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----CCcc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSY 212 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~ 212 (491)
+++|.+++.. .+.+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++..... ....
T Consensus 90 ~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 166 (267)
T cd06645 90 GGSLQDIYHV--TGPLSESQIAYVSRETLQGLYYLHSKG-KMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSF 166 (267)
T ss_pred CCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccc
Confidence 9999998863 457899999999999999999999999 99999999999999999999999999865432 2344
Q ss_pred ccCCCCCCccccc---CCCCCCCccchhHHHHHHHHHhCCCCCCCchhhH-hhhccccccccccccCCCCchhHHHHHHH
Q 011184 213 STNLAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-IRDRNLQMLTDSCLEGQFTDDDGTELVRL 288 (491)
Q Consensus 213 ~~t~~y~aPE~~~---~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (491)
.|+..|+|||++. ...++.++|||||||++|+|++|..|+....... ...........+... ....++..+.++
T Consensus 167 ~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l 244 (267)
T cd06645 167 IGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLK--DKMKWSNSFHHF 244 (267)
T ss_pred cCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCccc--ccCCCCHHHHHH
Confidence 6789999999874 4558889999999999999999998875332111 110000011111000 111345689999
Q ss_pred HHHhccCCCCCCCChhHHHH
Q 011184 289 ASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~ 308 (491)
+.+||+.+|++|||++++++
T Consensus 245 i~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 245 VKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred HHHHccCCchhCcCHHHHhc
Confidence 99999999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=323.63 Aligned_cols=251 Identities=20% Similarity=0.293 Sum_probs=199.6
Q ss_pred cccccccCCCCCccEEEEEEEC------CCCEEEEEEeCCCCCCC-hhHHHHHHHHHhccC-CCCcceEEeEeecCCeeE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERL 129 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~~ 129 (491)
.+.+.+.||+|+||.||+|++. .+..||||+++...... ...+.+|+.+|.++. ||||++++++|...+..+
T Consensus 38 ~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~ 117 (401)
T cd05107 38 NLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIY 117 (401)
T ss_pred HeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcE
Confidence 3456678899999999999853 24679999997543222 346889999999997 999999999999999999
Q ss_pred EEEecCCCCCHHHHhcccCC------------------------------------------------------------
Q 011184 130 LVAEYMPNETLAKHLFHWET------------------------------------------------------------ 149 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~------------------------------------------------------------ 149 (491)
+||||+++|+|.+++.....
T Consensus 118 iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (401)
T cd05107 118 IITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKG 197 (401)
T ss_pred EEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchh
Confidence 99999999999999864211
Q ss_pred ------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC
Q 011184 150 ------------------------------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 193 (491)
Q Consensus 150 ------------------------------------~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~ 193 (491)
..+++..+..++.||+.||.|||+.+ ++||||||+|||+++++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrdlkp~NiLl~~~~ 276 (401)
T cd05107 198 TVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN-CVHRDLAARNVLICEGK 276 (401)
T ss_pred hhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-cCcccCCcceEEEeCCC
Confidence 13567788899999999999999998 99999999999999999
Q ss_pred CeEEccCCCcccCCCC------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhcccc
Q 011184 194 NPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQ 266 (491)
Q Consensus 194 ~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~ 266 (491)
.+||+|||+++..... ....++..|+|||.+.+..++.++||||||+++|||++ |..|+.............
T Consensus 277 ~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~- 355 (401)
T cd05107 277 LVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAI- 355 (401)
T ss_pred EEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHH-
Confidence 9999999998754221 12345678999999998889999999999999999998 777765432211111100
Q ss_pred ccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccc
Q 011184 267 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~ 313 (491)
........+...+.++.+|+.+||..+|.+||++++|+..|+.+
T Consensus 356 ---~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 356 ---KRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred ---HcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 00111123445668999999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=320.24 Aligned_cols=247 Identities=16% Similarity=0.197 Sum_probs=192.9
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC--CChhHHHHHHHHHhccCCCCcceEEeEeecCC------e
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD------E 127 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~------~ 127 (491)
..|.+++.||+|+||.||++.. .+|..||||++..... .....+.+|+.+++.++||||+++++++...+ .
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 100 (359)
T cd07876 21 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQD 100 (359)
T ss_pred hceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccce
Confidence 4567788889999999999994 4689999999965322 23456889999999999999999999986543 4
Q ss_pred eEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC
Q 011184 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 207 (491)
Q Consensus 128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 207 (491)
.++||||++ ++|...+. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 101 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~-ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~ 174 (359)
T cd07876 101 VYLVMELMD-ANLCQVIH----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAC 174 (359)
T ss_pred eEEEEeCCC-cCHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEecCCCccccc
Confidence 799999997 56766663 34788899999999999999999999 9999999999999999999999999987543
Q ss_pred CC---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccc-----------------
Q 011184 208 DG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM----------------- 267 (491)
Q Consensus 208 ~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~----------------- 267 (491)
.. ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||...............
T Consensus 175 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (359)
T cd07876 175 TNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVR 254 (359)
T ss_pred cCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 22 2346789999999999889999999999999999999999888643211100000000
Q ss_pred -ccc--c-----cc-----------cCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 268 -LTD--S-----CL-----------EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 268 -~~~--~-----~~-----------~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
... + .. ........+..+.+|+.+||..||++|||+.+++..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 255 NYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000 0 00 000111234678999999999999999999999983
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-40 Score=322.57 Aligned_cols=248 Identities=16% Similarity=0.225 Sum_probs=194.3
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecC------C
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEG------D 126 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~------~ 126 (491)
...|++++.||+|+||.||++.. ..++.||||++...... ....+.+|+.+++.++||||+++++++... .
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 95 (355)
T cd07874 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQ 95 (355)
T ss_pred hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccc
Confidence 34677788889999999999994 45889999999754322 245688899999999999999999988643 3
Q ss_pred eeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccC
Q 011184 127 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 206 (491)
Q Consensus 127 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 206 (491)
..++||||++ ++|.+.+. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 96 ~~~lv~e~~~-~~l~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDikp~Nill~~~~~~kl~Dfg~~~~~ 169 (355)
T cd07874 96 DVYLVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTA 169 (355)
T ss_pred eeEEEhhhhc-ccHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHHEEECCCCCEEEeeCcccccC
Confidence 4799999997 56777663 35888999999999999999999999 999999999999999999999999998765
Q ss_pred CCC---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccc--------------
Q 011184 207 RDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT-------------- 269 (491)
Q Consensus 207 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~-------------- 269 (491)
... ....+|..|+|||++.+..++.++|||||||++|+|++|+.||.+.............+.
T Consensus 170 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (355)
T cd07874 170 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 249 (355)
T ss_pred CCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHH
Confidence 432 234678999999999988899999999999999999999998865432111000000000
Q ss_pred --------------------cccc--cCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 270 --------------------DSCL--EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 270 --------------------~~~~--~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
+... ....+...+..+.+|+.+||+.||++|||+.++++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 250 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 0000 001112234678999999999999999999999984
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=308.31 Aligned_cols=247 Identities=20% Similarity=0.305 Sum_probs=197.8
Q ss_pred ccccccCCCCCccEEEEEEEC------CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 59 ENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
+.+++.||+|++|.||+|... .+..|++|.+...... ....+.+|+.+++.++|+||+++++++...+..++|
T Consensus 8 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 87 (277)
T cd05036 8 ITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFIL 87 (277)
T ss_pred cEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEE
Confidence 455667799999999999954 3567999988644322 234689999999999999999999999998899999
Q ss_pred EecCCCCCHHHHhcccCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC---CeEEccCCCc
Q 011184 132 AEYMPNETLAKHLFHWET-----HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG---NPRLSTFGLM 203 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~---~~kl~Dfgla 203 (491)
|||++|++|.+++..... ..+++..+..++.||+.||.|||+.+ ++||||||+||+++.++ .+||+|||++
T Consensus 88 ~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~nil~~~~~~~~~~kl~dfg~~ 166 (277)
T cd05036 88 LELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH-FIHRDIAARNCLLTCKGPGRVAKIADFGMA 166 (277)
T ss_pred EecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccchheEEEeccCCCcceEeccCccc
Confidence 999999999999864321 25889999999999999999999998 99999999999998654 5999999998
Q ss_pred ccCCCCC------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCC
Q 011184 204 KNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQ 276 (491)
Q Consensus 204 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (491)
+...... ....+..|+|||++.+..++.++|||||||++|+|++ |..||.......+..... ......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~-----~~~~~~ 241 (277)
T cd05036 167 RDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVT-----GGGRLD 241 (277)
T ss_pred cccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-----cCCcCC
Confidence 7653221 1123457999999998889999999999999999997 887776543332221111 111123
Q ss_pred CCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhc
Q 011184 277 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 311 (491)
Q Consensus 277 ~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~ 311 (491)
.+..++..+.+++.+||+.+|++|||+.++++.|.
T Consensus 242 ~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 242 PPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 34556788999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-39 Score=305.59 Aligned_cols=247 Identities=23% Similarity=0.320 Sum_probs=194.7
Q ss_pred ccccCCCCCccEEEEEEECC-CC--EEEEEEeCCCCC--CChhHHHHHHHHHhccCCCCcceEEeEeecC------CeeE
Q 011184 61 IVSEHGEKAPNVVYKGKLEN-QR--RIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEG------DERL 129 (491)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~~~~-~~--~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~------~~~~ 129 (491)
+...||+|+||.||+|...+ +. .||+|.++.... ...+.+.+|+.+++.++||||+++++++... ...+
T Consensus 3 i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 82 (272)
T cd05075 3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPV 82 (272)
T ss_pred cccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcE
Confidence 34677999999999999644 33 689999875432 2345788999999999999999999987532 2468
Q ss_pred EEEecCCCCCHHHHhccc----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCccc
Q 011184 130 LVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 205 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 205 (491)
+||||+++|+|.+++... ....+++.....++.|++.||.|||+++ |+||||||+|||++.++.++|+|||+++.
T Consensus 83 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 161 (272)
T cd05075 83 VILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS-FIHRDLAARNCMLNENMNVCVADFGLSKK 161 (272)
T ss_pred EEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhheEEcCCCCEEECCCCcccc
Confidence 999999999999887421 2245889999999999999999999998 99999999999999999999999999876
Q ss_pred CCCCC------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCC
Q 011184 206 SRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 278 (491)
Q Consensus 206 ~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (491)
..... ...+++.|++||.+.+..++.++||||||+++|+|++ |..|+.......+....... .....+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~ 236 (272)
T cd05075 162 IYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQG-----NRLKQP 236 (272)
T ss_pred cCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-----CCCCCC
Confidence 54321 2234668999999998889999999999999999999 67777553322221111110 011223
Q ss_pred chhHHHHHHHHHHhccCCCCCCCChhHHHHHhccc
Q 011184 279 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 279 ~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~ 313 (491)
...+..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 237 ~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 237 PDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 45667899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=318.00 Aligned_cols=249 Identities=19% Similarity=0.170 Sum_probs=195.9
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
.|++++.||+|+||+||++.. .+++.||||++.... ......+.+|+.++..++|+||+++++++..++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD 81 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence 466788889999999999995 458999999986421 1234568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC---
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--- 210 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 210 (491)
|++||+|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~g~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (331)
T cd05597 82 YYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVLAIDSVHQLG-YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQ 159 (331)
T ss_pred cCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEECCCCHHHEEECCCCCEEEEECCceeecCCCCCcc
Confidence 9999999999864 2356899999999999999999999999 9999999999999999999999999986543321
Q ss_pred --ccccCCCCCCcccccC-----CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHH
Q 011184 211 --SYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 283 (491)
Q Consensus 211 --~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (491)
...||+.|+|||++.. ..++.++|||||||++|+|++|+.||.................... ........+.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~ 238 (331)
T cd05597 160 SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQ-FPPDVTDVSE 238 (331)
T ss_pred ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCccc-CCCccCCCCH
Confidence 2358999999999863 4578899999999999999999999866433222111111100000 0111223567
Q ss_pred HHHHHHHHhccCCCC--CCCChhHHHHH
Q 011184 284 ELVRLASRCLQYEPR--ERPNPKSLVTA 309 (491)
Q Consensus 284 ~~~~li~~cl~~dp~--~Rps~~~il~~ 309 (491)
.+.+++.+||..+++ .||++++++..
T Consensus 239 ~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 239 EAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred HHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 899999998865443 37899999875
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-39 Score=304.90 Aligned_cols=243 Identities=18% Similarity=0.234 Sum_probs=198.7
Q ss_pred cccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC-----ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 60 NIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-----DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
.+.+.+|.|++|.||++.. .+++.||+|.+...... ....+.+|++++++++||||+++++++..++..++|+|
T Consensus 5 ~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 84 (263)
T cd06625 5 RRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFME 84 (263)
T ss_pred cccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEE
Confidence 3445669999999999994 56899999998643321 23468889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 209 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 209 (491)
|+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++......
T Consensus 85 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~ 161 (263)
T cd06625 85 YMPGGSVKDQLKA--YGALTETVTRKYTRQILEGVEYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSG 161 (263)
T ss_pred ECCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccceecccccccc
Confidence 9999999998863 456889999999999999999999999 999999999999999999999999998654321
Q ss_pred ---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHH
Q 011184 210 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
....++..|+|||.+.+..++.++||||||+++|+|++|+.|+........... .........++...+..+.
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 237 (263)
T cd06625 162 TGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFK----IATQPTNPQLPSHVSPDAR 237 (263)
T ss_pred ccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHH----HhccCCCCCCCccCCHHHH
Confidence 234567889999999988899999999999999999999988754322111111 1111112234556678999
Q ss_pred HHHHHhccCCCCCCCChhHHHHH
Q 011184 287 RLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~ 309 (491)
+++.+||..+|.+|||+.+++..
T Consensus 238 ~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 238 NFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred HHHHHHhhcCcccCCCHHHHhhC
Confidence 99999999999999999999874
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-39 Score=303.99 Aligned_cols=248 Identities=20% Similarity=0.308 Sum_probs=202.4
Q ss_pred cccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCC
Q 011184 58 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 137 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~ 137 (491)
.+++.+.+|+|+||.||++...++..+|+|.+.... .....+.+|+++++.++|+||+++++++.. ...+++|||+++
T Consensus 7 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~ 84 (260)
T cd05073 7 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAK 84 (260)
T ss_pred ceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCC
Confidence 456777889999999999997777889999887543 235678999999999999999999999887 778999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-----cc
Q 011184 138 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SY 212 (491)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~ 212 (491)
++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++....... ..
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 163 (260)
T cd05073 85 GSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGA 163 (260)
T ss_pred CcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC-ccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCC
Confidence 99999997544556888999999999999999999998 9999999999999999999999999887543321 12
Q ss_pred ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
.++..|+|||++.+..++.++|+||||++++++++ |..|+............... .....+...+.++.+++.+
T Consensus 164 ~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~ 238 (260)
T cd05073 164 KFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-----YRMPRPENCPEELYNIMMR 238 (260)
T ss_pred cccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCC-----CCCCCcccCCHHHHHHHHH
Confidence 34567999999998889999999999999999999 78777654332222111111 1112234556789999999
Q ss_pred hccCCCCCCCChhHHHHHhccc
Q 011184 292 CLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~~L~~~ 313 (491)
||+.+|++||++.+++..|+.+
T Consensus 239 ~l~~~p~~Rp~~~~l~~~L~~~ 260 (260)
T cd05073 239 CWKNRPEERPTFEYIQSVLDDF 260 (260)
T ss_pred HcccCcccCcCHHHHHHHHhcC
Confidence 9999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=312.12 Aligned_cols=253 Identities=20% Similarity=0.273 Sum_probs=196.3
Q ss_pred cccccccCCCCCccEEEEEEECC---------------CCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLEN---------------QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGC 121 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~ 121 (491)
.+++.+.||+|+||.||++...+ ...||+|.++..... ....+.+|++++++++||||++++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~ 85 (295)
T cd05097 6 QLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGV 85 (295)
T ss_pred hCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEE
Confidence 56778889999999999987532 235899998754322 23568899999999999999999999
Q ss_pred eecCCeeEEEEecCCCCCHHHHhcccC----------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC
Q 011184 122 CCEGDERLLVAEYMPNETLAKHLFHWE----------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 191 (491)
Q Consensus 122 ~~~~~~~~lv~e~~~~gsL~~~l~~~~----------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~ 191 (491)
+...+..++||||+++++|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+||++++
T Consensus 86 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~Nill~~ 164 (295)
T cd05097 86 CVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN-FVHRDLATRNCLVGN 164 (295)
T ss_pred EcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC-eeccccChhhEEEcC
Confidence 999999999999999999999985321 123678899999999999999999999 999999999999999
Q ss_pred CCCeEEccCCCcccCCCCC------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhC--CCCCCCchhhHhhhc
Q 011184 192 DGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG--KHIPPSHALDLIRDR 263 (491)
Q Consensus 192 ~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg--~~~~~~~~~~~~~~~ 263 (491)
++.+||+|||++....... ...++..|+|||.+.+..++.++||||||+++++|+++ ..|+...........
T Consensus 165 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~ 244 (295)
T cd05097 165 HYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIEN 244 (295)
T ss_pred CCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHH
Confidence 9999999999987543221 12335689999999888899999999999999999984 444443222111111
Q ss_pred cccccc--cccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhc
Q 011184 264 NLQMLT--DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 311 (491)
Q Consensus 264 ~~~~~~--~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~ 311 (491)
...... ........+...+..+.+|+.+||+.||++|||+.+|++.|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 245 TGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 000000 000111123345678999999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=303.79 Aligned_cols=246 Identities=25% Similarity=0.379 Sum_probs=200.8
Q ss_pred CccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
+..+++...+|+|+||.||++.. +++.||+|.++... ....+.+|+.+++.++||||+++++++..+ ..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~ 80 (254)
T cd05083 5 LQKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELM 80 (254)
T ss_pred HHHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECC
Confidence 34567778889999999999975 57889999986432 346789999999999999999999998764 479999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-Ccccc
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYST 214 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~~ 214 (491)
++++|.+++.......+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... .....
T Consensus 81 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 159 (254)
T cd05083 81 SKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK-LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKL 159 (254)
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccCcceEEEcCCCcEEECCCccceeccccCCCCCC
Confidence 9999999997544456899999999999999999999998 999999999999999999999999998764432 22234
Q ss_pred CCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhc
Q 011184 215 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 293 (491)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 293 (491)
+..|+|||.+.+..++.++|+||||+++|+|++ |+.|+............... .....+...+..+.+++.+||
T Consensus 160 ~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l 234 (254)
T cd05083 160 PVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKG-----YRMEPPEGCPADVYVLMTSCW 234 (254)
T ss_pred CceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCC-----CCCCCCCcCCHHHHHHHHHHc
Confidence 567999999988889999999999999999998 88777654333222211111 111223456678999999999
Q ss_pred cCCCCCCCChhHHHHHhc
Q 011184 294 QYEPRERPNPKSLVTALS 311 (491)
Q Consensus 294 ~~dp~~Rps~~~il~~L~ 311 (491)
+.+|+.||++.+++..|+
T Consensus 235 ~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 235 ETEPKKRPSFHKLREKLE 252 (254)
T ss_pred CCChhhCcCHHHHHHHHc
Confidence 999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-39 Score=303.53 Aligned_cols=246 Identities=18% Similarity=0.214 Sum_probs=203.2
Q ss_pred ccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCC--CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 59 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
|++++.+|.|+||.||.+. ..++..+++|.+.... ......+.+|++++++++|+||+++++++...+..+++|||+
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~ 81 (256)
T cd08221 2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYA 81 (256)
T ss_pred ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEec
Confidence 4567788999999999998 4568999999986433 233567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----Cc
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 211 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 211 (491)
++++|.+++.......+++..+..++.|++.+|.|||+.+ ++|+||+|+||+++.++.+||+|||++...... ..
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (256)
T cd08221 82 NGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG-ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAET 160 (256)
T ss_pred CCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCChHhEEEeCCCCEEECcCcceEEcccccccccc
Confidence 9999999997543456899999999999999999999998 999999999999999999999999998764332 23
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
..+++.|+|||.+.+..++.++||||||+++++|++|..|+................. ...+...+.++.+++.+
T Consensus 161 ~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~ 235 (256)
T cd08221 161 VVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNY-----TPVVSVYSSELISLVHS 235 (256)
T ss_pred cCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC-----CCCccccCHHHHHHHHH
Confidence 4578899999999888889999999999999999999988765433222211111111 11224456789999999
Q ss_pred hccCCCCCCCChhHHHHHh
Q 011184 292 CLQYEPRERPNPKSLVTAL 310 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~~L 310 (491)
||..+|.+||++.++++.+
T Consensus 236 ~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 236 LLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred HcccCcccCCCHHHHhhCc
Confidence 9999999999999998853
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-39 Score=302.16 Aligned_cols=241 Identities=28% Similarity=0.422 Sum_probs=198.0
Q ss_pred cCCCCCccEEEEEEECCCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCCHHH
Q 011184 64 EHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 142 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gsL~~ 142 (491)
.||.|++|.||++...+++.|++|.+...... ....+.+|++++++++||||+++++++......++||||+++++|.+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~ 81 (251)
T cd05041 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLT 81 (251)
T ss_pred ccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHH
Confidence 57999999999999766899999998765433 34578999999999999999999999999999999999999999999
Q ss_pred HhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC------ccccCC
Q 011184 143 HLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNL 216 (491)
Q Consensus 143 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------~~~~t~ 216 (491)
++.. ....+++..+..++.+++.+|.|||+.+ ++||||||+||+++.++.++|+|||++....... ....+.
T Consensus 82 ~l~~-~~~~~~~~~~~~~~~~~~~~l~~lH~~~-i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~ 159 (251)
T cd05041 82 FLRK-KKNRLTVKKLLQMSLDAAAGMEYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPI 159 (251)
T ss_pred HHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-EehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCccee
Confidence 9864 2346889999999999999999999998 9999999999999999999999999987654221 112345
Q ss_pred CCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccC
Q 011184 217 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 295 (491)
Q Consensus 217 ~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~ 295 (491)
.|+|||.+.++.++.++|+||||+++|+|+| |..|+.............. ......+...+..+.+++.+||..
T Consensus 160 ~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~ 234 (251)
T cd05041 160 KWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIES-----GYRMPAPQLCPEEIYRLMLQCWAY 234 (251)
T ss_pred ccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhc-----CCCCCCCccCCHHHHHHHHHHhcc
Confidence 7999999988889999999999999999999 6666654332222211111 111123445667999999999999
Q ss_pred CCCCCCChhHHHHHhc
Q 011184 296 EPRERPNPKSLVTALS 311 (491)
Q Consensus 296 dp~~Rps~~~il~~L~ 311 (491)
+|++|||+.++++.|+
T Consensus 235 ~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 235 DPENRPSFSEIYNELQ 250 (251)
T ss_pred ChhhCcCHHHHHHHhh
Confidence 9999999999999885
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=307.70 Aligned_cols=250 Identities=22% Similarity=0.288 Sum_probs=200.8
Q ss_pred ccccccccCCCCCccEEEEEEEC-CC---CEEEEEEeCCCC-CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE-NQ---RRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
..+++...+|.|+||.||+|... ++ ..||||.++... ......|..|+.+++.++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 34567788899999999999954 33 369999987542 22345799999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCCc
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 211 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~ 211 (491)
|||+++++|.+++.. ..+.+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++........
T Consensus 84 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~~l~~al~~lH~~g-~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~ 161 (269)
T cd05065 84 TEFMENGALDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 161 (269)
T ss_pred EecCCCCcHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccChheEEEcCCCcEEECCCccccccccCcc
Confidence 999999999999864 2356899999999999999999999998 99999999999999999999999998865432211
Q ss_pred -------cc--cCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchh
Q 011184 212 -------YS--TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 281 (491)
Q Consensus 212 -------~~--~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (491)
.. .+..|+|||.+.+..++.++||||||+++||+++ |..|+............... .....+..+
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~~ 236 (269)
T cd05065 162 DPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQD-----YRLPPPMDC 236 (269)
T ss_pred ccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-----CcCCCcccC
Confidence 11 1346999999998889999999999999999886 88887654332222211111 111123345
Q ss_pred HHHHHHHHHHhccCCCCCCCChhHHHHHhccc
Q 011184 282 GTELVRLASRCLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 282 ~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~ 313 (491)
+..+.+++.+||+.+|.+||++.+++..|+.+
T Consensus 237 ~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 237 PTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 67899999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=316.27 Aligned_cols=247 Identities=17% Similarity=0.201 Sum_probs=191.7
Q ss_pred ccccCCCC--CccEEEEEEE-CCCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 61 IVSEHGEK--APNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 61 ~i~~lG~G--~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
+++.||+| +|++||++.. .+|+.||||++....... ...+.+|+++++.++||||++++++|..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45677888 7789999994 568999999997543222 346778999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC-------
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------- 208 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~------- 208 (491)
++++|.+++.......+++..++.++.|++.||.|||+++ ++||||||+|||++.++.++++||+.......
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~ 160 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRV 160 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCChhhEEEecCCcEEEcccchhhccccccccccc
Confidence 9999999986533456899999999999999999999999 99999999999999999999999986432211
Q ss_pred ----CCccccCCCCCCcccccC--CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhh----ccccccccc-------
Q 011184 209 ----GKSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD----RNLQMLTDS------- 271 (491)
Q Consensus 209 ----~~~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~----~~~~~~~~~------- 271 (491)
.....++..|+|||++.+ ..++.++|||||||++|+|++|+.||.......... .......+.
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (327)
T cd08227 161 VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEE 240 (327)
T ss_pred cccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhh
Confidence 112235677999999976 358899999999999999999999885432111000 000000000
Q ss_pred -----------------------------cccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 272 -----------------------------CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 272 -----------------------------~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
..........++.+.+|+.+||+.||++|||++++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 241 LTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred cccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 0000112234578999999999999999999999987
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=312.28 Aligned_cols=248 Identities=19% Similarity=0.236 Sum_probs=197.9
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
+++++.||.|+||.||++.. .++..+|+|.+...... ....+.+|++++++++||||+++++++..++..++||||++
T Consensus 3 ~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~ 82 (308)
T cd06615 3 FEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMD 82 (308)
T ss_pred ceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccC
Confidence 56677889999999999994 46888999998654322 23468899999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccccceeeCCCCCeEEccCCCcccCCC--CCccc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSYS 213 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--~~~~~ 213 (491)
|++|.+++.. ...+++..+..++.|++.||.|||+ .+ ++||||||+|||++.++.++|+|||++..... .....
T Consensus 83 ~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (308)
T cd06615 83 GGSLDQVLKK--AGRIPENILGKISIAVLRGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 159 (308)
T ss_pred CCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhhCC-EEECCCChHHEEEecCCcEEEccCCCcccccccccccCC
Confidence 9999999963 3678999999999999999999998 46 99999999999999999999999999875433 23456
Q ss_pred cCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcc---ccccccc-------------------
Q 011184 214 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN---LQMLTDS------------------- 271 (491)
Q Consensus 214 ~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~---~~~~~~~------------------- 271 (491)
++..|+|||.+.+..++.++||||||+++++|++|+.|+............ .......
T Consensus 160 ~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (308)
T cd06615 160 GTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAI 239 (308)
T ss_pred CCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhH
Confidence 788999999998888999999999999999999999887543221111000 0000000
Q ss_pred ---------cccCCCC-chhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 272 ---------CLEGQFT-DDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 272 ---------~~~~~~~-~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
......+ ...+.++.+++.+||..+|++|||+.+++..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 240 FELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred HHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000111 1245689999999999999999999999984
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=310.74 Aligned_cols=253 Identities=18% Similarity=0.266 Sum_probs=198.6
Q ss_pred cccccccCCCCCccEEEEEEECC-----------------CCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLEN-----------------QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLL 119 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~ 119 (491)
.++++++||+|+||.||++.... +..||+|.+...... ....+.+|++++.+++||||++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 85 (296)
T cd05051 6 PLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLL 85 (296)
T ss_pred hCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 56788899999999999988432 245899998754322 355788999999999999999999
Q ss_pred eEeecCCeeEEEEecCCCCCHHHHhcccC---------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeC
Q 011184 120 GCCCEGDERLLVAEYMPNETLAKHLFHWE---------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 190 (491)
Q Consensus 120 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~ 190 (491)
+++..++..++||||+++++|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+||+++
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~-i~H~dlkp~Nili~ 164 (296)
T cd05051 86 GVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN-FVHRDLATRNCLVG 164 (296)
T ss_pred EEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC-ccccccchhceeec
Confidence 99999999999999999999999986432 126899999999999999999999998 99999999999999
Q ss_pred CCCCeEEccCCCcccCCCC------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh--CCCCCCCchhhHhhh
Q 011184 191 EDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS--GKHIPPSHALDLIRD 262 (491)
Q Consensus 191 ~~~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt--g~~~~~~~~~~~~~~ 262 (491)
.++.++|+|||++...... ....+++.|+|||.+.+..++.++||||||+++|+|++ +..|+..........
T Consensus 165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~ 244 (296)
T cd05051 165 KNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIE 244 (296)
T ss_pred CCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHH
Confidence 9999999999998754322 12234678999999988889999999999999999998 444543322111111
Q ss_pred ccccccc--cccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhc
Q 011184 263 RNLQMLT--DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 311 (491)
Q Consensus 263 ~~~~~~~--~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~ 311 (491)
....... ........+...+.++.+++.+||+.||++|||+.+|++.|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 245 NAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 1110000 001111223345678999999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-40 Score=324.77 Aligned_cols=247 Identities=18% Similarity=0.236 Sum_probs=194.5
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC--CChhHHHHHHHHHhccCCCCcceEEeEeecCC-----eeEE
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD-----ERLL 130 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~-----~~~l 130 (491)
+++++.||+|+||+||++.. .+++.||||++..... ...+.+.+|+++++.++||||+++++++...+ ..++
T Consensus 2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 81 (372)
T cd07853 2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYV 81 (372)
T ss_pred CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEE
Confidence 35667789999999999994 5689999999864321 23457889999999999999999999998776 7899
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 209 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 209 (491)
||||+. ++|.+.+. ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 82 v~e~~~-~~l~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~ 157 (372)
T cd07853 82 VTELMQ-SDLHKIIV--SPQPLSSDHVKVFLYQILRGLKYLHSAG-ILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE 157 (372)
T ss_pred Eeeccc-cCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChHHEEECCCCCEEeccccceeecccCc
Confidence 999997 68888775 3467899999999999999999999999 999999999999999999999999998754322
Q ss_pred ----CccccCCCCCCcccccCCC-CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccc------------------
Q 011184 210 ----KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ------------------ 266 (491)
Q Consensus 210 ----~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~------------------ 266 (491)
....++..|+|||++.+.. ++.++|||||||++|||++|+.||..............
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 237 (372)
T cd07853 158 SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGAR 237 (372)
T ss_pred cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHH
Confidence 2235688899999988744 78999999999999999999998865432111000000
Q ss_pred -----cccc-ccc--cCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 267 -----MLTD-SCL--EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 267 -----~~~~-~~~--~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
.... +.. ........+.++.+|+.+||+.||.+|||+.+++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 238 AHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 0000 000 001223346789999999999999999999999874
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=308.61 Aligned_cols=244 Identities=20% Similarity=0.273 Sum_probs=195.4
Q ss_pred ccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 59 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
+++++.||+|+||.||++. ..++..||+|.+..... .....+.+|++++.+++||||+++++++...+..++||||++
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 82 (279)
T cd06619 3 IQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMD 82 (279)
T ss_pred chheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCC
Confidence 4667788999999999999 45689999999865432 223568899999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC--Ccccc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYST 214 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~~~~ 214 (491)
+++|..+. .+++..+..++.|++.||.|||+.+ ++|+||||+|||++.++.++|+|||++...... ....+
T Consensus 83 ~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~ 155 (279)
T cd06619 83 GGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLK-ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVG 155 (279)
T ss_pred CCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCC-EeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCC
Confidence 99997543 4678889999999999999999999 999999999999999999999999998754332 34568
Q ss_pred CCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhH---hhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 215 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL---IRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
+..|+|||++.+..++.++||||||+++|+|++|+.||....... ........+.............++++.+++.+
T Consensus 156 ~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 235 (279)
T cd06619 156 TNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQ 235 (279)
T ss_pred ChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHH
Confidence 899999999998889999999999999999999998875321100 00000011111111111122355789999999
Q ss_pred hccCCCCCCCChhHHHHH
Q 011184 292 CLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~~ 309 (491)
||+.+|.+||++++++..
T Consensus 236 ~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 236 CMRKQPKERPAPENLMDH 253 (279)
T ss_pred HhhCChhhCCCHHHHhcC
Confidence 999999999999999873
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=300.56 Aligned_cols=244 Identities=18% Similarity=0.241 Sum_probs=207.5
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCC
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 137 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~ 137 (491)
..++++||+|++|.||++.+ .+|..+|||.+.... +.+++..|+.++++++.|++|+++|.+.....+|||||||-.
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 35678899999999999994 569999999987654 788999999999999999999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----CCccc
Q 011184 138 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYS 213 (491)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~ 213 (491)
|+..+.++- .++++++.++..++...+.||+|||... -||||||..|||++.+|.+||+|||.|....+ ..+..
T Consensus 113 GSiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH~~~-KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVI 190 (502)
T KOG0574|consen 113 GSISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLHDLK-KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVI 190 (502)
T ss_pred CcHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHHHHH-HHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccc
Confidence 999998875 5689999999999999999999999986 89999999999999999999999999876543 35678
Q ss_pred cCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhc
Q 011184 214 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 293 (491)
Q Consensus 214 ~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 293 (491)
||+.|||||++..-.|+.++||||||++..||..|++|+..-.. ....+.....+.+...-|...+.++-+++++||
T Consensus 191 GTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHP---MRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CL 267 (502)
T KOG0574|consen 191 GTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHP---MRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCL 267 (502)
T ss_pred cCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccc---cceeEeccCCCCCCCCChHhhhhHHHHHHHHHh
Confidence 99999999999988999999999999999999999987643210 011111122222233346678899999999999
Q ss_pred cCCCCCCCChhHHHHH
Q 011184 294 QYEPRERPNPKSLVTA 309 (491)
Q Consensus 294 ~~dp~~Rps~~~il~~ 309 (491)
-+.|++|.|+-.+++.
T Consensus 268 iK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 268 IKKPEERKTALRLCEH 283 (502)
T ss_pred cCCHHHHHHHHHHhhh
Confidence 9999999999888763
|
|
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=329.54 Aligned_cols=251 Identities=18% Similarity=0.177 Sum_probs=205.0
Q ss_pred cccccccCCCCCccEEEEEEECCC-CEEEEEEeCCCCCCChhHHHHHHHHHhccC-CCCcceEEeE-eec---C---Cee
Q 011184 58 VENIVSEHGEKAPNVVYKGKLENQ-RRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNRLTNLLGC-CCE---G---DER 128 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~-~~~---~---~~~ 128 (491)
..++.+.|.+|||+.||++....+ ..||+|++-.....+.+...+|+++|+.|+ |+|||.+++. ... . -.+
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Ev 117 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEV 117 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEE
Confidence 345667779999999999996554 999999997766666788999999999996 9999999993 221 1 247
Q ss_pred EEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccccceeeCCCCCeEEccCCCcccCC
Q 011184 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 207 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 207 (491)
+|.||||.||+|-+++..+....|++.++++|+.++|+|+.+||... +|||||||-+||||+.+|+.||||||-+....
T Consensus 118 llLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~ 197 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKI 197 (738)
T ss_pred EeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccccccc
Confidence 89999999999999998766677999999999999999999999875 59999999999999999999999999876422
Q ss_pred CCC-------------ccccCCCCCCcccc---cCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccc
Q 011184 208 DGK-------------SYSTNLAFTPPEYL---RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 271 (491)
Q Consensus 208 ~~~-------------~~~~t~~y~aPE~~---~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~ 271 (491)
... ...+|+-|+|||++ .+.+.+.|+|||+|||+||-|+....||.....-.+....+.-
T Consensus 198 ~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng~Y~~---- 273 (738)
T KOG1989|consen 198 LSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNGNYSF---- 273 (738)
T ss_pred CCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEeccccC----
Confidence 111 22468999999987 4567899999999999999999999999765333222222211
Q ss_pred cccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 272 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 272 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
...+..+..+.+||..||+.||.+||++-+++..+-.+...
T Consensus 274 ----P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 274 ----PPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred ----CCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 11246788999999999999999999999999887666543
|
|
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=308.81 Aligned_cols=251 Identities=20% Similarity=0.294 Sum_probs=202.8
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
..+++++.||+|++|+||++.. .+++.||+|++..... .....+.+|+++++.++||||+++++++...+..++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 4567788899999999999994 4688999999865432 2356789999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccccceeeCCCCCeEEccCCCcccCCC--CCc
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKS 211 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--~~~ 211 (491)
+++++|.+++.. .+++++..+..++.+++.+|.|||+ .+ ++||||+|+||+++.++.++|+|||++..... ...
T Consensus 85 ~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~~-i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~ 161 (284)
T cd06620 85 MDCGSLDRIYKK--GGPIPVEILGKIAVAVVEGLTYLYNVHR-IMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADT 161 (284)
T ss_pred CCCCCHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHhcC-eeccCCCHHHEEECCCCcEEEccCCcccchhhhccCc
Confidence 999999998863 4578999999999999999999997 56 99999999999999999999999999765422 223
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhH--------hhhccccccccccccCCCC-chhH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL--------IRDRNLQMLTDSCLEGQFT-DDDG 282 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~-~~~~ 282 (491)
..++..|+|||++.+..++.++|||||||++|+|++|+.|+....... +.. .......... ..++ ...+
T Consensus 162 ~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~ 239 (284)
T cd06620 162 FVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILD-LLQQIVQEPP-PRLPSSDFP 239 (284)
T ss_pred cccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHH-HHHHHhhccC-CCCCchhcC
Confidence 467899999999988889999999999999999999999886433210 000 0111111111 1111 2256
Q ss_pred HHHHHHHHHhccCCCCCCCChhHHHHHhcc
Q 011184 283 TELVRLASRCLQYEPRERPNPKSLVTALSP 312 (491)
Q Consensus 283 ~~~~~li~~cl~~dp~~Rps~~~il~~L~~ 312 (491)
.++.+|+.+||+.||.+|||+.++++...-
T Consensus 240 ~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~ 269 (284)
T cd06620 240 EDLRDFVDACLLKDPTERPTPQQLCAMPPF 269 (284)
T ss_pred HHHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence 789999999999999999999999986433
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-39 Score=303.89 Aligned_cols=237 Identities=25% Similarity=0.369 Sum_probs=189.8
Q ss_pred cCCCCCccEEEEEEECC-C----------CEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 64 EHGEKAPNVVYKGKLEN-Q----------RRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~-~----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
.||+|+||.||+|...+ + ..|++|.+...... ...+.+|+.+++.++||||+++++++.. ...++||
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 56999999999999654 3 25788887654432 6789999999999999999999999988 7789999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC-------CeEEccCCCccc
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-------NPRLSTFGLMKN 205 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-------~~kl~Dfgla~~ 205 (491)
||+++++|.+++... ...+++..+..++.||+.||.|||+++ ++||||||+|||++.++ .+||+|||++..
T Consensus 80 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~ 157 (259)
T cd05037 80 EYVKFGPLDVFLHRE-KNNVSLHWKLDVAKQLASALHYLEDKK-LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPIT 157 (259)
T ss_pred EcCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhhCC-eecccCccceEEEecCccccCCceeEEeCCCCcccc
Confidence 999999999999742 236899999999999999999999998 99999999999999887 799999999887
Q ss_pred CCCCCccccCCCCCCcccccCC--CCCCCccchhHHHHHHHHHhC-CCCCCCchhhHhhhccccccccccccCCCCchhH
Q 011184 206 SRDGKSYSTNLAFTPPEYLRTG--RVTPESVIYSFGTLLLDLLSG-KHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 282 (491)
Q Consensus 206 ~~~~~~~~~t~~y~aPE~~~~~--~~~~~~Dv~slG~vl~elltg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (491)
........++..|+|||++.+. .++.++||||||+++|+|++| ..|+.......... ... . ....+....
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~-~~~-~-----~~~~~~~~~ 230 (259)
T cd05037 158 VLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKER-FYQ-D-----QHRLPMPDC 230 (259)
T ss_pred cccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHH-HHh-c-----CCCCCCCCc
Confidence 6554455677889999999876 689999999999999999996 44443221111100 000 0 011111222
Q ss_pred HHHHHHHHHhccCCCCCCCChhHHHHHhc
Q 011184 283 TELVRLASRCLQYEPRERPNPKSLVTALS 311 (491)
Q Consensus 283 ~~~~~li~~cl~~dp~~Rps~~~il~~L~ 311 (491)
..+.+++.+||..+|.+|||+.++++.|.
T Consensus 231 ~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 231 AELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred hHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 68999999999999999999999998773
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-39 Score=304.68 Aligned_cols=245 Identities=23% Similarity=0.305 Sum_probs=194.8
Q ss_pred cCCCCCccEEEEEEEC-CCC--EEEEEEeCCCCC-CChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEEecCCCC
Q 011184 64 EHGEKAPNVVYKGKLE-NQR--RIAVKRFNRMAW-PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPNE 138 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~g 138 (491)
.||+|+||.||+|... ++. .+++|.++.... .....+.+|++++.++ +||||+++++++...+..++||||++++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 81 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence 4699999999999964 343 468888874332 2345788999999999 7999999999999999999999999999
Q ss_pred CHHHHhcccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcc
Q 011184 139 TLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 204 (491)
Q Consensus 139 sL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 204 (491)
+|.+++.... ...+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||++.
T Consensus 82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~-i~H~dikp~nili~~~~~~kl~dfgl~~ 160 (270)
T cd05047 82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADFGLSR 160 (270)
T ss_pred cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccccceEEEcCCCeEEECCCCCcc
Confidence 9999986421 124789999999999999999999998 9999999999999999999999999975
Q ss_pred cCCCC---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCch
Q 011184 205 NSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 280 (491)
Q Consensus 205 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (491)
..... .....+..|+|||++.+..++.++||||||++++||++ |..||.............. ......+..
T Consensus 161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~-----~~~~~~~~~ 235 (270)
T cd05047 161 GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-----GYRLEKPLN 235 (270)
T ss_pred ccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhC-----CCCCCCCCc
Confidence 32211 11223567999999988889999999999999999997 8887754332221111111 011122334
Q ss_pred hHHHHHHHHHHhccCCCCCCCChhHHHHHhcccc
Q 011184 281 DGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 314 (491)
Q Consensus 281 ~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~ 314 (491)
.+.++.+++.+||..+|.+|||+.+++..|..+.
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 236 CDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 5678999999999999999999999999997663
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-39 Score=301.41 Aligned_cols=247 Identities=22% Similarity=0.339 Sum_probs=200.9
Q ss_pred ccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
+++++.+.+|.|++|.||++...++..+|+|.+.... .....+.+|++++++++||||+++++++......++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 3456778889999999999997668899999986543 235679999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-----c
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----S 211 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~ 211 (491)
+++|.+++.. ....+++..+..++.|++.+|.|||+.+ ++|+||||+||+++.++.++|+|||++....... .
T Consensus 83 ~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05112 83 HGCLSDYLRA-QRGKFSQETLLGMCLDVCEGMAYLESSN-VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTG 160 (256)
T ss_pred CCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccccceEEEcCCCeEEECCCcceeecccCcccccCC
Confidence 9999999864 2346889999999999999999999998 9999999999999999999999999887543221 2
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
..++..|+|||.+.+..++.++||||||+++|+|++ |..|+............... .....+...+..+.+|+.
T Consensus 161 ~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~ 235 (256)
T cd05112 161 TKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAG-----FRLYKPRLASQSVYELMQ 235 (256)
T ss_pred CccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCC-----CCCCCCCCCCHHHHHHHH
Confidence 234568999999998889999999999999999998 88776544322222111111 011112234578999999
Q ss_pred HhccCCCCCCCChhHHHHHhc
Q 011184 291 RCLQYEPRERPNPKSLVTALS 311 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~L~ 311 (491)
+||+.+|++|||+.++++.|.
T Consensus 236 ~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 236 HCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred HHcccChhhCCCHHHHHHhhC
Confidence 999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=306.31 Aligned_cols=251 Identities=18% Similarity=0.255 Sum_probs=199.9
Q ss_pred HHHhcCCccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCee
Q 011184 50 KNATSGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 128 (491)
Q Consensus 50 ~~~~~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~ 128 (491)
..++++++...++ |+|+||.||+|. ..++..|++|.+........+.+.+|+.+++.++|+||+++++++..++..
T Consensus 4 ~~~~~~~~~~~~l---g~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (268)
T cd06624 4 EYEYDENGERVVL---GKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFF 80 (268)
T ss_pred ccccccCCceEEE---ecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEE
Confidence 3455666666544 999999999999 446788999998766544566899999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHhcccCCCCC--CHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC-CCCeEEccCCCccc
Q 011184 129 LLVAEYMPNETLAKHLFHWETHPM--KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKN 205 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~~~l--~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla~~ 205 (491)
++|+||+++++|.+++... ...+ ++..+..++.||+.||.|||+.+ |+||||||+||+++. ++.++|+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~h~dl~p~nil~~~~~~~~~l~dfg~~~~ 158 (268)
T cd06624 81 KIFMEQVPGGSLSALLRSK-WGPLKDNEQTIIFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLVNTYSGVVKISDFGTSKR 158 (268)
T ss_pred EEEEecCCCCCHHHHHHHh-cccCCCcHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence 9999999999999998642 2344 78888999999999999999998 999999999999976 67999999998865
Q ss_pred CCC----CCccccCCCCCCcccccCCC--CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCc
Q 011184 206 SRD----GKSYSTNLAFTPPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 279 (491)
Q Consensus 206 ~~~----~~~~~~t~~y~aPE~~~~~~--~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (491)
... .....++..|+|||++.+.. ++.++||||||+++|+|++|..|+........... ..........++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~ 235 (268)
T cd06624 159 LAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMF---KVGMFKIHPEIPE 235 (268)
T ss_pred cccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHh---hhhhhccCCCCCc
Confidence 432 12345788999999987644 78899999999999999999988753221110000 0000011223455
Q ss_pred hhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 280 DDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 280 ~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
..+.++.+++.+||+.+|.+|||+.+++.
T Consensus 236 ~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 236 SLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred ccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 66788999999999999999999999987
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=309.29 Aligned_cols=255 Identities=22% Similarity=0.327 Sum_probs=202.0
Q ss_pred ccccccccCCCCCccEEEEEEEC-----CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeec--CCee
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE-----NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCE--GDER 128 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~--~~~~ 128 (491)
..+++++.+|+|+||.||++.+. ++..||||+++..... ....+.+|+++++.++||||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 34566788899999999999853 3678999999765533 35679999999999999999999999877 5578
Q ss_pred EEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC
Q 011184 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 208 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 208 (491)
++||||+++++|.+++... ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 84 ~lv~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRH-RDQINLKRLLLFSSQICKGMDYLGSQR-YIHRDLAARNILVESEDLVKISDFGLAKVLPE 161 (284)
T ss_pred EEEEecCCCCCHHHHHHhC-ccccCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHhEEEcCCCCEEEccccccccccc
Confidence 9999999999999999642 235899999999999999999999999 99999999999999999999999999876553
Q ss_pred CC-------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhh----------hccccccccc
Q 011184 209 GK-------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR----------DRNLQMLTDS 271 (491)
Q Consensus 209 ~~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~----------~~~~~~~~~~ 271 (491)
.. ...++..|++||.+.+..++.++||||||+++++|++|..|+......... ..........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (284)
T cd05038 162 DKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKE 241 (284)
T ss_pred CCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHc
Confidence 21 122345699999998888999999999999999999999876432211100 0000000011
Q ss_pred cccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccc
Q 011184 272 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 272 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~ 313 (491)
......+..++.++.+++.+||+.+|.+|||+.++++.|+.+
T Consensus 242 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 242 GERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred CCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 111122334557899999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-39 Score=324.69 Aligned_cols=242 Identities=19% Similarity=0.207 Sum_probs=190.3
Q ss_pred ccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCC
Q 011184 59 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 137 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~ 137 (491)
+.+.+.||.|+||.||++... .++.||||... ...+.+|+++|++++|+||+++++++..++..++|||++.
T Consensus 171 y~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~- 243 (461)
T PHA03211 171 FAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR- 243 (461)
T ss_pred eEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-
Confidence 567788899999999999954 48899999642 2346789999999999999999999999999999999995
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC------Cc
Q 011184 138 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KS 211 (491)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------~~ 211 (491)
++|.+++.. ....+++..++.|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++..... ..
T Consensus 244 ~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~g-IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 321 (461)
T PHA03211 244 SDLYTYLGA-RLRPLGLAQVTAVARQLLSAIDYIHGEG-IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYG 321 (461)
T ss_pred CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EEECcCCHHHEEECCCCCEEEcccCCceecccccccccccc
Confidence 788888854 2347999999999999999999999999 999999999999999999999999998754322 13
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCch------------hhHhhhcccc--ccccc------
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA------------LDLIRDRNLQ--MLTDS------ 271 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~------------~~~~~~~~~~--~~~~~------ 271 (491)
..||+.|+|||++.+..++.++|||||||++|||++|..++.... ...+...... .....
T Consensus 322 ~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~ 401 (461)
T PHA03211 322 IAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLV 401 (461)
T ss_pred cCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHH
Confidence 458999999999998889999999999999999999875432211 0111110000 00000
Q ss_pred -----------cccCCC-----CchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 272 -----------CLEGQF-----TDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 272 -----------~~~~~~-----~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
...... ....+.++.+||.+||+.||.+|||+.|+|+.
T Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 402 SQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 000000 01234578999999999999999999999983
|
|
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-39 Score=303.27 Aligned_cols=240 Identities=20% Similarity=0.322 Sum_probs=197.5
Q ss_pred ccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCCh---------hHHHHHHHHHhccCCCCcceEEeEeecCCeeEE
Q 011184 61 IVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDP---------RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~---------~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
+...||.|++|.||+|.. .+++.||+|.+........ +.+.+|+.++++++||||+++++++...+..++
T Consensus 4 ~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (267)
T cd06628 4 KGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNI 83 (267)
T ss_pred ccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEE
Confidence 446679999999999994 4688999999865433221 458899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 209 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 209 (491)
||||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||+++.....
T Consensus 84 v~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lH~~~-ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06628 84 FLEYVPGGSVAALLNN--YGAFEETLVRNFVRQILKGLNYLHNRG-IIHRDIKGANILVDNKGGIKISDFGISKKLEANS 160 (267)
T ss_pred EEEecCCCCHHHHHHh--ccCccHHHHHHHHHHHHHHHHHHHhcC-cccccCCHHHEEEcCCCCEEecccCCCccccccc
Confidence 9999999999999963 356889999999999999999999998 999999999999999999999999988765421
Q ss_pred ---------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCch
Q 011184 210 ---------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 280 (491)
Q Consensus 210 ---------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (491)
....++..|+|||.+.+..++.++|+||||+++|+|++|..|+.......... .+.. ......+..
T Consensus 161 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~----~~~~-~~~~~~~~~ 235 (267)
T cd06628 161 LSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIF----KIGE-NASPEIPSN 235 (267)
T ss_pred ccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHH----HHhc-cCCCcCCcc
Confidence 12346788999999998889999999999999999999998886532211100 0001 112234455
Q ss_pred hHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 281 DGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 281 ~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.+..+.+++.+||+.||.+||++.++++
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 236 ISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred cCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 6789999999999999999999999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-39 Score=304.34 Aligned_cols=249 Identities=22% Similarity=0.298 Sum_probs=200.3
Q ss_pred cccccccCCCCCccEEEEEEEC-C---CCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-N---QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
.+++...||+|+||.||+|... + +..+|+|.++..... ....+.+|+.++++++||||+++++++..++..++||
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (267)
T cd05066 5 CIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVT 84 (267)
T ss_pred HeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEE
Confidence 3566778899999999999853 2 337999998654322 2457899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCCc-
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS- 211 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~- 211 (491)
||+++++|.+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+|||++.++.++|+|||++........
T Consensus 85 e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~ 162 (267)
T cd05066 85 EYMENGSLDAFLRK-HDGQFTVIQLVGMLRGIASGMKYLSDMG-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 162 (267)
T ss_pred EcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeehhhchhcEEECCCCeEEeCCCCcccccccccce
Confidence 99999999999964 2356899999999999999999999998 99999999999999999999999999876543211
Q ss_pred ------cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHH
Q 011184 212 ------YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 284 (491)
Q Consensus 212 ------~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (491)
..++..|++||.+.+..++.++|+||||+++|++++ |..|+................ ....+...++.
T Consensus 163 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 237 (267)
T cd05066 163 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGY-----RLPAPMDCPAA 237 (267)
T ss_pred eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCC-----cCCCCCCCCHH
Confidence 112457999999998889999999999999999887 888875443222111111111 11123345678
Q ss_pred HHHHHHHhccCCCCCCCChhHHHHHhccc
Q 011184 285 LVRLASRCLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 285 ~~~li~~cl~~dp~~Rps~~~il~~L~~~ 313 (491)
+.+++.+||+.+|.+||++.++++.|+.+
T Consensus 238 ~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 238 LHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred HHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 99999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=308.10 Aligned_cols=248 Identities=17% Similarity=0.227 Sum_probs=201.7
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
...+++++.||.|++|.||++.. .++..||+|.+........+.+.+|++++++++||||+++++++..++..++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 34577888999999999999995 46889999999765544556789999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----C
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 210 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 210 (491)
+++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... .
T Consensus 84 ~~~~~L~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 161 (280)
T cd06611 84 CDGGALDSIMLE-LERGLTEPQIRYVCRQMLEALNFLHSHK-VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRD 161 (280)
T ss_pred cCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEECCCCCEEEccCccchhhcccccccc
Confidence 999999998864 2357899999999999999999999999 999999999999999999999999987654322 2
Q ss_pred ccccCCCCCCccccc-----CCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHH
Q 011184 211 SYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 285 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (491)
...+++.|++||.+. ...++.++||||||+++|+|++|+.|+............... .......+...+.++
T Consensus 162 ~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 238 (280)
T cd06611 162 TFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKS---EPPTLDQPSKWSSSF 238 (280)
T ss_pred eeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcC---CCCCcCCcccCCHHH
Confidence 345788999999875 344778999999999999999999887643222111111110 001111234456789
Q ss_pred HHHHHHhccCCCCCCCChhHHHH
Q 011184 286 VRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.+++.+||+.+|.+||++.++++
T Consensus 239 ~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 239 NDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred HHHHHHHhccChhhCcCHHHHhc
Confidence 99999999999999999999987
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-39 Score=301.47 Aligned_cols=242 Identities=22% Similarity=0.309 Sum_probs=195.4
Q ss_pred cCCCCCccEEEEEEEC-CC---CEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCC
Q 011184 64 EHGEKAPNVVYKGKLE-NQ---RRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 138 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~g 138 (491)
+||+|+||.||+|... .+ ..||+|.+...... ..+.+.+|+++++.++||||+++++++. .+..++||||++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~ 80 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPLG 80 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCCC
Confidence 5799999999999842 22 68999998765432 3457899999999999999999999875 45689999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCCc-------
Q 011184 139 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS------- 211 (491)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~------- 211 (491)
+|.+++.. ...+++..+..++.|++.||.|||..+ ++|+||||+|||++.++.+||+|||+++.......
T Consensus 81 ~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lh~~~-i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~ 157 (257)
T cd05060 81 PLLKYLKK--RREIPVSDLKELAHQVAMGMAYLESKH-FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTA 157 (257)
T ss_pred cHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHhhcC-eeccCcccceEEEcCCCcEEeccccccceeecCCcccccccC
Confidence 99999974 346899999999999999999999998 99999999999999999999999999876533221
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
..++..|+|||.+.+..++.++||||||+++|+|++ |..|+.............. ......+...+..+.+++.
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~ 232 (257)
T cd05060 158 GRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLES-----GERLPRPEECPQEIYSIML 232 (257)
T ss_pred ccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHc-----CCcCCCCCCCCHHHHHHHH
Confidence 112457999999998889999999999999999998 8877654322211111111 1111234456678999999
Q ss_pred HhccCCCCCCCChhHHHHHhcccc
Q 011184 291 RCLQYEPRERPNPKSLVTALSPLQ 314 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~L~~~~ 314 (491)
+||..+|++||++.++++.|+.+.
T Consensus 233 ~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 233 SCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred HHhcCChhhCcCHHHHHHHHHhcc
Confidence 999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-39 Score=311.02 Aligned_cols=252 Identities=22% Similarity=0.312 Sum_probs=201.4
Q ss_pred ccccccCCCCCccEEEEEEEC--------CCCEEEEEEeCCCCC-CChhHHHHHHHHHhcc-CCCCcceEEeEeecCCee
Q 011184 59 ENIVSEHGEKAPNVVYKGKLE--------NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDER 128 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~ 128 (491)
+.+...+|+|+||.||++... ....+|+|.++.... .....+.+|+.+++++ +||||+++++++...+..
T Consensus 14 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 93 (314)
T cd05099 14 LVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPL 93 (314)
T ss_pred eeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCce
Confidence 456788899999999999731 245799999875432 2245688999999999 699999999999998999
Q ss_pred EEEEecCCCCCHHHHhcccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCC
Q 011184 129 LLVAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 194 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~ 194 (491)
++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+++ ++||||||+|||++.++.
T Consensus 94 ~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g-i~H~dlkp~Nill~~~~~ 172 (314)
T cd05099 94 YVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR-CIHRDLAARNVLVTEDNV 172 (314)
T ss_pred EEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC-eeeccccceeEEEcCCCc
Confidence 99999999999999996422 235788999999999999999999999 999999999999999999
Q ss_pred eEEccCCCcccCCCCC------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccc
Q 011184 195 PRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQM 267 (491)
Q Consensus 195 ~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~ 267 (491)
+||+|||+++...... ...++..|+|||.+.+..++.++||||||+++|+|++ |..|+..............
T Consensus 173 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~- 251 (314)
T cd05099 173 MKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLRE- 251 (314)
T ss_pred EEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-
Confidence 9999999987654321 1123457999999988889999999999999999999 7777654432222111111
Q ss_pred cccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 268 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
......+...+.++.+++.+||..+|++|||+.++++.|+.+...
T Consensus 252 ----~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 252 ----GHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred ----CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence 111123445567899999999999999999999999999887653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=319.55 Aligned_cols=247 Identities=15% Similarity=0.225 Sum_probs=193.8
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC--CChhHHHHHHHHHhccCCCCcceEEeEeecC------Ce
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEG------DE 127 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~------~~ 127 (491)
..|.+++.||+|+||.||++.. ..++.||||++..... .....+.+|+.+++.++||||+++++++... ..
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~ 103 (364)
T cd07875 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 103 (364)
T ss_pred cceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCe
Confidence 4567778889999999999994 4588999999975332 2345688999999999999999999987543 35
Q ss_pred eEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC
Q 011184 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 207 (491)
Q Consensus 128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 207 (491)
.++||||++ ++|.+.+. ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 104 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 177 (364)
T cd07875 104 VYIVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177 (364)
T ss_pred EEEEEeCCC-CCHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhhCC-eecCCCCHHHEEECCCCcEEEEeCCCccccC
Confidence 799999997 57777773 35788899999999999999999999 9999999999999999999999999997654
Q ss_pred CC---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccccccccc------------
Q 011184 208 DG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC------------ 272 (491)
Q Consensus 208 ~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~------------ 272 (491)
.. ....+|..|+|||++.+..++.++|||||||++|+|++|+.||...............+..++
T Consensus 178 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (364)
T cd07875 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVR 257 (364)
T ss_pred CCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHH
Confidence 32 234678999999999988899999999999999999999998865432111111100000000
Q ss_pred -----------------c-------cCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 273 -----------------L-------EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 273 -----------------~-------~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
. ........+..+.+|+.+||+.||.+|||+.++++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 258 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0 000111124578999999999999999999999884
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-39 Score=304.72 Aligned_cols=246 Identities=21% Similarity=0.279 Sum_probs=198.1
Q ss_pred ccccCCCCCccEEEEEEEC-CC---CEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 61 IVSEHGEKAPNVVYKGKLE-NQ---RRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
....+|+|++|.||+|... ++ ..+++|.+..... .....+..|+++++.++||||+++.+++...+..++||||+
T Consensus 9 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (268)
T cd05063 9 KQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYM 88 (268)
T ss_pred EeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcC
Confidence 3456699999999999954 33 3799999865432 22457889999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCCc----
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS---- 211 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~---- 211 (491)
++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++........
T Consensus 89 ~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 166 (268)
T cd05063 89 ENGALDKYLRD-HDGEFSSYQLVGMLRGIAAGMKYLSDMN-YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYT 166 (268)
T ss_pred CCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhhEEEcCCCcEEECCCccceeccccccccee
Confidence 99999999864 2357899999999999999999999999 99999999999999999999999999875433211
Q ss_pred ---cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHH
Q 011184 212 ---YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 287 (491)
Q Consensus 212 ---~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (491)
...+..|+|||++.+..++.++||||||+++|||++ |..|+............... .....+...+..+.+
T Consensus 167 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~~~~ 241 (268)
T cd05063 167 TSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDG-----FRLPAPMDCPSAVYQ 241 (268)
T ss_pred ccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcC-----CCCCCCCCCCHHHHH
Confidence 112356999999988889999999999999999998 88887654332222111111 111123345678999
Q ss_pred HHHHhccCCCCCCCChhHHHHHhccc
Q 011184 288 LASRCLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~L~~~ 313 (491)
++.+||+.+|++||++.++++.|+.+
T Consensus 242 li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 242 LMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred HHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 99999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-39 Score=303.80 Aligned_cols=244 Identities=14% Similarity=0.200 Sum_probs=194.6
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhcc-CCCCcceEEeEeecC------CeeEE
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEG------DERLL 130 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~------~~~~l 130 (491)
++++..+|.|+||.||+|.. .+++.||+|++.... .....+.+|+.++.++ +||||+++++++... ...++
T Consensus 8 y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~i 86 (272)
T cd06637 8 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWL 86 (272)
T ss_pred hhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEE
Confidence 34556679999999999995 458899999986543 3456788999999998 799999999998753 45899
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC--
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-- 208 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 208 (491)
||||+++++|.+++.......+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++.....
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~ 165 (272)
T cd06637 87 VMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV 165 (272)
T ss_pred EEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHEEECCCCCEEEccCCCceeccccc
Confidence 999999999999987544457899999999999999999999998 99999999999999999999999999875432
Q ss_pred --CCccccCCCCCCcccccC-----CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchh
Q 011184 209 --GKSYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 281 (491)
Q Consensus 209 --~~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (491)
.....|+..|+|||++.+ ..++.++|||||||++|+|++|..|+........... ..............
T Consensus 166 ~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~ 241 (272)
T cd06637 166 GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL----IPRNPAPRLKSKKW 241 (272)
T ss_pred ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHH----HhcCCCCCCCCCCc
Confidence 233467889999999863 3578899999999999999999988753321111100 01111111122345
Q ss_pred HHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 282 GTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 282 ~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
+..+.+|+.+||..+|.+|||+.++++
T Consensus 242 ~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 242 SKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred CHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 678999999999999999999999986
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-39 Score=304.88 Aligned_cols=242 Identities=18% Similarity=0.266 Sum_probs=200.3
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC-CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
.++++..+|.|++|.||+|.. .+++.||+|.+.... ......+.+|+++++.++|+||+++++++..+...++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 356677889999999999995 468999999986543 333567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----Cc
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 211 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 211 (491)
++++|.+++.. .++++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++...... ..
T Consensus 82 ~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (274)
T cd06609 82 GGGSCLDLLKP---GKLDETYIAFILREVLLGLEYLHEEG-KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNT 157 (274)
T ss_pred CCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEcccccceeeccccccccc
Confidence 99999999853 47899999999999999999999998 999999999999999999999999998765432 23
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCch-hHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD-DGTELVRLAS 290 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~ 290 (491)
..++..|+|||.+.+..++.++||||||+++|+|++|..|+............... .....+.. .+.++.+++.
T Consensus 158 ~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~ 232 (274)
T cd06609 158 FVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKN-----NPPSLEGNKFSKPFKDFVS 232 (274)
T ss_pred ccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhc-----CCCCCcccccCHHHHHHHH
Confidence 45778899999999888999999999999999999999887543221111111111 11112222 5678999999
Q ss_pred HhccCCCCCCCChhHHHH
Q 011184 291 RCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~ 308 (491)
+||..+|++|||+++++.
T Consensus 233 ~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 233 LCLNKDPKERPSAKELLK 250 (274)
T ss_pred HHhhCChhhCcCHHHHhh
Confidence 999999999999999987
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-39 Score=307.87 Aligned_cols=249 Identities=23% Similarity=0.319 Sum_probs=199.3
Q ss_pred cccccccCCCCCccEEEEEEEC------CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
++++++.||.|+||.||++... ++..||+|.+...... ....+.+|+.++++++||||+++++++..++..++
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~l 85 (288)
T cd05050 6 NIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCL 85 (288)
T ss_pred hceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEE
Confidence 4567788899999999999853 4678999998754322 24568899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhcccC--------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeC
Q 011184 131 VAEYMPNETLAKHLFHWE--------------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 190 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~--------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~ 190 (491)
||||+++++|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+||+++
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~-i~H~dl~p~nil~~ 164 (288)
T cd05050 86 LFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK-FVHRDLATRNCLVG 164 (288)
T ss_pred EEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-eecccccHhheEec
Confidence 999999999999996321 124678889999999999999999998 99999999999999
Q ss_pred CCCCeEEccCCCcccCCCC------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhc
Q 011184 191 EDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDR 263 (491)
Q Consensus 191 ~~~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~ 263 (491)
.++.++|+|||++...... .....+..|+|||.+.+..++.++|||||||++|+|++ |..|+...........
T Consensus 165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~ 244 (288)
T cd05050 165 ENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYY 244 (288)
T ss_pred CCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 9999999999998753221 12234567999999988889999999999999999998 7666654332222111
Q ss_pred cccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcc
Q 011184 264 NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 312 (491)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~ 312 (491)
... .. ....+...+.++.+++.+||+.+|++|||+.++++.|+.
T Consensus 245 ~~~----~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 245 VRD----GN-VLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred Hhc----CC-CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 111 10 111234566789999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-39 Score=301.52 Aligned_cols=247 Identities=17% Similarity=0.208 Sum_probs=201.6
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
.+++...+|.|++|.||++.. .+++.+++|++........+.+.+|++++++++||||+++++++...+..+++|||++
T Consensus 4 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~ 83 (262)
T cd06613 4 DYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCG 83 (262)
T ss_pred ceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCC
Confidence 355667789999999999995 4578999999976655556789999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----Ccc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSY 212 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 212 (491)
+++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ...
T Consensus 84 ~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~ 161 (262)
T cd06613 84 GGSLQDIYQV-TRGPLSELQIAYVCRETLKGLAYLHETG-KIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSF 161 (262)
T ss_pred CCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCC-ceecCCChhhEEECCCCCEEECccccchhhhhhhhccccc
Confidence 9999998864 2357899999999999999999999998 999999999999999999999999998754432 234
Q ss_pred ccCCCCCCcccccCC---CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhh-ccccccccccccCCCCchhHHHHHHH
Q 011184 213 STNLAFTPPEYLRTG---RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD-RNLQMLTDSCLEGQFTDDDGTELVRL 288 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~---~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (491)
.++..|+|||.+.+. .++.++||||||+++|+|++|..|+.......... ......... ....+...+.++.++
T Consensus 162 ~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l 239 (262)
T cd06613 162 IGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPP--KLKDKEKWSPVFHDF 239 (262)
T ss_pred cCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCc--cccchhhhhHHHHHH
Confidence 577889999999776 78899999999999999999998876432211111 001101111 111233456789999
Q ss_pred HHHhccCCCCCCCChhHHHH
Q 011184 289 ASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~ 308 (491)
+.+||..+|.+|||+.+++.
T Consensus 240 i~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 240 IKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred HHHHcCCChhhCCCHHHHhc
Confidence 99999999999999999976
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-39 Score=307.81 Aligned_cols=251 Identities=22% Similarity=0.318 Sum_probs=198.6
Q ss_pred cccccccCCCCCccEEEEEEEC------CCCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
.+++++.||+|+||.||+|... .+..||+|.+..... .....+.+|+.+++.++||||+++++++...+..++
T Consensus 7 ~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 86 (288)
T cd05061 7 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLV 86 (288)
T ss_pred HceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEE
Confidence 4567788899999999999743 245799999864432 123467889999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhcccC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCC
Q 011184 131 VAEYMPNETLAKHLFHWE--------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 202 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 202 (491)
||||+++|+|.+++.... ...+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||+
T Consensus 87 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dikp~nili~~~~~~~L~Dfg~ 165 (288)
T cd05061 87 VMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK-FVHRDLAARNCMVAHDFTVKIGDFGM 165 (288)
T ss_pred EEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcCCCCChheEEEcCCCcEEECcCCc
Confidence 999999999999996421 123467788999999999999999998 99999999999999999999999999
Q ss_pred cccCCCC------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccC
Q 011184 203 MKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEG 275 (491)
Q Consensus 203 a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (491)
++..... ....++..|+|||.+.+..++.++|||||||++|||++ |..|+.......+....... ...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-----~~~ 240 (288)
T cd05061 166 TRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG-----GYL 240 (288)
T ss_pred cccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCC
Confidence 8754321 12234567999999998889999999999999999999 56666543332222111111 011
Q ss_pred CCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccc
Q 011184 276 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 314 (491)
Q Consensus 276 ~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~ 314 (491)
..+...+..+.+++.+||+.||++|||+.++++.|+...
T Consensus 241 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 241 DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 223345678999999999999999999999999887653
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-39 Score=316.71 Aligned_cols=253 Identities=23% Similarity=0.307 Sum_probs=197.9
Q ss_pred cccccccCCCCCccEEEEEEE------CCCCEEEEEEeCCCCCC-ChhHHHHHHHHHhcc-CCCCcceEEeEeecC-Cee
Q 011184 58 VENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEG-DER 128 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~-~~~ 128 (491)
.+++++.||.|+||.||+|.. .+++.||||.++..... ....+.+|+.++.++ +||||+++++++... ...
T Consensus 8 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 87 (343)
T cd05103 8 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL 87 (343)
T ss_pred HhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCce
Confidence 467788899999999999973 34678999999754322 245688999999999 689999999988654 467
Q ss_pred EEEEecCCCCCHHHHhcccC------------------------------------------------------------
Q 011184 129 LLVAEYMPNETLAKHLFHWE------------------------------------------------------------ 148 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~------------------------------------------------------------ 148 (491)
++||||+++|+|.+++....
T Consensus 88 ~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (343)
T cd05103 88 MVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAE 167 (343)
T ss_pred EEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhh
Confidence 89999999999999986421
Q ss_pred -----CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC------ccccCCC
Q 011184 149 -----THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLA 217 (491)
Q Consensus 149 -----~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~------~~~~t~~ 217 (491)
...+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++....... ...++..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~ 246 (343)
T cd05103 168 QEDLYKKVLTLEDLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK 246 (343)
T ss_pred hhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcc
Confidence 123678888999999999999999998 9999999999999999999999999987643221 2234567
Q ss_pred CCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCC
Q 011184 218 FTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 296 (491)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d 296 (491)
|+|||.+.+..++.++||||||+++|+|++ |..|++........... +. .......+...++++.+++..||+.|
T Consensus 247 y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~cl~~~ 322 (343)
T cd05103 247 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR---LK-EGTRMRAPDYTTPEMYQTMLDCWHGE 322 (343)
T ss_pred eECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHH---Hh-ccCCCCCCCCCCHHHHHHHHHHccCC
Confidence 999999988889999999999999999997 77776543211100000 00 00111123334578999999999999
Q ss_pred CCCCCChhHHHHHhccccc
Q 011184 297 PRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 297 p~~Rps~~~il~~L~~~~~ 315 (491)
|++|||+.+|++.|+.+.+
T Consensus 323 p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 323 PSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred hhhCcCHHHHHHHHHHHHh
Confidence 9999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-39 Score=308.08 Aligned_cols=253 Identities=19% Similarity=0.274 Sum_probs=195.8
Q ss_pred cccccccCCCCCccEEEEEEEC-----------------CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-----------------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLL 119 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~ 119 (491)
.+++.+.||+|+||.||++... ++..||+|.+...... ....+.+|+.+++.++|+||++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~ 85 (296)
T cd05095 6 RLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLL 85 (296)
T ss_pred hceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEE
Confidence 3567788899999999998532 2446899998754322 245789999999999999999999
Q ss_pred eEeecCCeeEEEEecCCCCCHHHHhcccCC---------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeC
Q 011184 120 GCCCEGDERLLVAEYMPNETLAKHLFHWET---------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 190 (491)
Q Consensus 120 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~---------~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~ 190 (491)
+++..++..++||||+++++|.+++..... ..+++..+..++.|++.||.|||+.+ ++||||||+|||++
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dlkp~Nili~ 164 (296)
T cd05095 86 AVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN-FVHRDLATRNCLVG 164 (296)
T ss_pred EEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC-eecccCChheEEEc
Confidence 999999999999999999999999864221 23677889999999999999999999 99999999999999
Q ss_pred CCCCeEEccCCCcccCCCCC------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh--CCCCCCCchhhHhhh
Q 011184 191 EDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS--GKHIPPSHALDLIRD 262 (491)
Q Consensus 191 ~~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt--g~~~~~~~~~~~~~~ 262 (491)
.++.++|+|||++....... ...+++.|++||...++.++.++|||||||++|||++ |..|+.......+..
T Consensus 165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~ 244 (296)
T cd05095 165 KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIE 244 (296)
T ss_pred CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHH
Confidence 99999999999987543221 1223568999999888889999999999999999998 555554322211111
Q ss_pred ccccccc--cccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhc
Q 011184 263 RNLQMLT--DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 311 (491)
Q Consensus 263 ~~~~~~~--~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~ 311 (491)
....... ........+..++..+.+|+.+||+.||.+||++.+|++.|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 245 NTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 0000000 000001123345678999999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=311.81 Aligned_cols=254 Identities=21% Similarity=0.296 Sum_probs=203.2
Q ss_pred cccccccCCCCCccEEEEEEECC--------CCEEEEEEeCCCCC-CChhHHHHHHHHHhcc-CCCCcceEEeEeecCCe
Q 011184 58 VENIVSEHGEKAPNVVYKGKLEN--------QRRIAVKRFNRMAW-PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDE 127 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~ 127 (491)
.+++++.||+|+||.||++.... +..||+|.++.... .....+.+|+++++++ +||||++++++|..++.
T Consensus 13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 92 (334)
T cd05100 13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 92 (334)
T ss_pred HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCc
Confidence 35678889999999999997321 23689998874332 2245788999999999 79999999999999999
Q ss_pred eEEEEecCCCCCHHHHhcccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC
Q 011184 128 RLLVAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 193 (491)
Q Consensus 128 ~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~ 193 (491)
.+++|||+++|+|.+++.... ...+++..+..++.|++.||.|||+++ ++||||||+|||++.++
T Consensus 93 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g-ivH~dlkp~Nill~~~~ 171 (334)
T cd05100 93 LYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK-CIHRDLAARNVLVTEDN 171 (334)
T ss_pred eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC-eeccccccceEEEcCCC
Confidence 999999999999999986421 134788899999999999999999999 99999999999999999
Q ss_pred CeEEccCCCcccCCCCC------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhcccc
Q 011184 194 NPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQ 266 (491)
Q Consensus 194 ~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~ 266 (491)
.+||+|||+++...... ...++..|+|||.+.+..++.++||||||+++|||++ |..|+..............
T Consensus 172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~ 251 (334)
T cd05100 172 VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKE 251 (334)
T ss_pred cEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence 99999999987644321 1223467999999998889999999999999999998 7777665433322221111
Q ss_pred ccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccC
Q 011184 267 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
. .....+...+..+.+++.+||+.+|.+|||+.+++..|+.+....
T Consensus 252 ~-----~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 252 G-----HRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred C-----CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 1 111233455678999999999999999999999999999887543
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-39 Score=301.27 Aligned_cols=245 Identities=16% Similarity=0.196 Sum_probs=200.6
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC--CChhHHHHHHHHHhccCCCCcceEEeEeec-CCeeEEEEec
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCE-GDERLLVAEY 134 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~~~~~~~~-~~~~~lv~e~ 134 (491)
|++++.+|.|++|.||++.. .+++.||+|++..... ...+.+.+|++++++++|+||+++++.+.. ++..++||||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGF 81 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecc
Confidence 56778889999999999994 4578999999865332 234568899999999999999999998764 4467999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----C
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 210 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 210 (491)
+++++|.+++.......+++.++..++.|++.||.+||+.+ ++||||||+||+++.++.++|+|||++...... .
T Consensus 82 ~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~-i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 160 (257)
T cd08223 82 CEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH-ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAS 160 (257)
T ss_pred cCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCchhEEEecCCcEEEecccceEEecccCCccc
Confidence 99999999997544556899999999999999999999999 999999999999999999999999998754322 2
Q ss_pred ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 211 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
...+++.|+|||++.+..++.++||||||+++++|++|+.|+................ ....+...+..+.+++.
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~ 235 (257)
T cd08223 161 TLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGK-----LPPMPKDYSPELGELIA 235 (257)
T ss_pred cccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcC-----CCCCccccCHHHHHHHH
Confidence 3457889999999998889999999999999999999998876543322211111111 11234456789999999
Q ss_pred HhccCCCCCCCChhHHHHH
Q 011184 291 RCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~ 309 (491)
+||+.+|++|||+.++++.
T Consensus 236 ~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 236 TMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred HHhccCcccCCCHHHHhcC
Confidence 9999999999999999873
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-39 Score=302.52 Aligned_cols=246 Identities=17% Similarity=0.214 Sum_probs=186.4
Q ss_pred cCCCCCccEEEEEEECCC---CEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCC
Q 011184 64 EHGEKAPNVVYKGKLENQ---RRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 139 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gs 139 (491)
+||+|+||.||++...++ ..+++|.+..... ...+.+.+|+.+++.++||||+++++.|......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 579999999999974332 3466777654332 235679999999999999999999999999999999999999999
Q ss_pred HHHHhcccC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC------CCCc
Q 011184 140 LAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR------DGKS 211 (491)
Q Consensus 140 L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~------~~~~ 211 (491)
|.+++.... ....++..+..++.||+.||.|||+.+ ++||||||+|||++.++.++|+|||++.... ....
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 160 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN-FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDD 160 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC-eeccCCccceEEEcCCccEEecccccccccCcchhhhcccC
Confidence 999986422 234667778899999999999999998 9999999999999999999999999876421 1223
Q ss_pred cccCCCCCCcccccC-------CCCCCCccchhHHHHHHHHHhCC-CCCCCchhhHhhhccccccccccccCCCCchhHH
Q 011184 212 YSTNLAFTPPEYLRT-------GRVTPESVIYSFGTLLLDLLSGK-HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 283 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~-------~~~~~~~Dv~slG~vl~elltg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (491)
..++..|+|||++.. ..++.++||||||+++|||+++. .|+.........................+...+.
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (268)
T cd05086 161 KCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSE 240 (268)
T ss_pred CcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcH
Confidence 456789999998753 23578999999999999999864 4543322211111111111111112223344667
Q ss_pred HHHHHHHHhccCCCCCCCChhHHHHHhc
Q 011184 284 ELVRLASRCLQYEPRERPNPKSLVTALS 311 (491)
Q Consensus 284 ~~~~li~~cl~~dp~~Rps~~~il~~L~ 311 (491)
.+.+++..|| .+|.+||++++|++.|.
T Consensus 241 ~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 241 RWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred HHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 8999999999 67999999999998773
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=315.60 Aligned_cols=249 Identities=18% Similarity=0.166 Sum_probs=196.1
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
.+++++.||+|+||.||++.. .+++.||+|++.... ......+.+|+.++..++|+||+++++++..++..++|||
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~E 81 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMD 81 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 466778889999999999995 468899999986421 1223457889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 209 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 209 (491)
|++||+|.+++.. ....+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 82 y~~gg~L~~~l~~-~~~~l~~~~~~~~~~qi~~~L~~lH~~~-iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 159 (331)
T cd05624 82 YYVGGDLLTLLSK-FEDRLPEDMARFYIAEMVLAIHSIHQLH-YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQ 159 (331)
T ss_pred CCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCchHHEEEcCCCCEEEEeccceeeccCCCcee
Confidence 9999999999964 2357899999999999999999999999 999999999999999999999999998754332
Q ss_pred -CccccCCCCCCcccccC-----CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHH
Q 011184 210 -KSYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 283 (491)
Q Consensus 210 -~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (491)
....||+.|+|||++.+ +.++.++|||||||++|+|++|+.||................... ........++.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~-~~p~~~~~~~~ 238 (331)
T cd05624 160 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF-QFPSHITDVSE 238 (331)
T ss_pred eccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcc-cCCCccccCCH
Confidence 12458999999999875 457889999999999999999999986543322221111110000 01111234567
Q ss_pred HHHHHHHHhccCCCCC--CCChhHHHHH
Q 011184 284 ELVRLASRCLQYEPRE--RPNPKSLVTA 309 (491)
Q Consensus 284 ~~~~li~~cl~~dp~~--Rps~~~il~~ 309 (491)
++.+++.+||..++.+ |++++++++.
T Consensus 239 ~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 239 EAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred HHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 8999999999876544 4678888764
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-39 Score=301.47 Aligned_cols=244 Identities=26% Similarity=0.326 Sum_probs=190.5
Q ss_pred cCCCCCccEEEEEEEC----CCCEEEEEEeCCCC-CCChhHHHHHHHHHhccCCCCcceEEeEee-cCCeeEEEEecCCC
Q 011184 64 EHGEKAPNVVYKGKLE----NQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCC-EGDERLLVAEYMPN 137 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~~~~~~~-~~~~~~lv~e~~~~ 137 (491)
.||+|+||.||+|... .+..||||.+.... ......+.+|+.+++.++||||+++++++. .++..++||||+++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~ 81 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKH 81 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCC
Confidence 4699999999999842 23579999985432 223467889999999999999999999775 45568999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC--------
Q 011184 138 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-------- 209 (491)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-------- 209 (491)
++|.+++.. ....+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||++......
T Consensus 82 ~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 159 (262)
T cd05058 82 GDLRNFIRS-ETHNPTVKDLIGFGLQVAKGMEYLASKK-FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNH 159 (262)
T ss_pred CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccCcceEEEcCCCcEEECCccccccccCCcceeeccc
Confidence 999999864 2345677888999999999999999998 999999999999999999999999998754321
Q ss_pred CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCC-CCCchhhHhhhccccccccccccCCCCchhHHHHHHH
Q 011184 210 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI-PPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 288 (491)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (491)
....++..|+|||.+.+..++.++||||||+++|||++|..| +............... .....+...+..+.++
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l 234 (262)
T cd05058 160 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQG-----RRLLQPEYCPDPLYEV 234 (262)
T ss_pred ccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC-----CCCCCCCcCCHHHHHH
Confidence 122346689999999888899999999999999999996544 4332221111111110 0111123345789999
Q ss_pred HHHhccCCCCCCCChhHHHHHhcccc
Q 011184 289 ASRCLQYEPRERPNPKSLVTALSPLQ 314 (491)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~L~~~~ 314 (491)
+.+||+.+|++||++.+++..|+.+.
T Consensus 235 i~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 235 MLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred HHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 99999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-39 Score=304.80 Aligned_cols=251 Identities=18% Similarity=0.238 Sum_probs=201.1
Q ss_pred ccccccCCCCCccEEEEEEECC-----CCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeec-CCeeEEE
Q 011184 59 ENIVSEHGEKAPNVVYKGKLEN-----QRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCE-GDERLLV 131 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~-~~~~~lv 131 (491)
+.+...+|+|+||.||+|.... +..|++|.+..... .....+.+|+.+++.++||||+++++++.. +...+++
T Consensus 8 ~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 87 (280)
T cd05043 8 VTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVL 87 (280)
T ss_pred eEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEE
Confidence 4455667999999999999654 68899999864432 224568899999999999999999998766 4678999
Q ss_pred EecCCCCCHHHHhcccCC------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCccc
Q 011184 132 AEYMPNETLAKHLFHWET------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 205 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~------~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 205 (491)
+||+++++|.+++..... ..+++..++.++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+++.
T Consensus 88 ~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-i~H~di~p~nil~~~~~~~kl~d~g~~~~ 166 (280)
T cd05043 88 YPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG-VIHKDIAARNCVIDEELQVKITDNALSRD 166 (280)
T ss_pred EEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccCHhhEEEcCCCcEEECCCCCccc
Confidence 999999999999864321 45889999999999999999999998 99999999999999999999999999875
Q ss_pred CCCCC------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCC
Q 011184 206 SRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 278 (491)
Q Consensus 206 ~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (491)
..... ...++..|+|||++.+..++.++||||||+++|++++ |+.|+.......+....... .....+
T Consensus 167 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~ 241 (280)
T cd05043 167 LFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDG-----YRLAQP 241 (280)
T ss_pred ccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcC-----CCCCCC
Confidence 43221 2235667999999988889999999999999999999 88877654332222111111 111123
Q ss_pred chhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 279 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 279 ~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
..++..+.+++.+||..||++|||+.+++..|+.+..
T Consensus 242 ~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 242 INCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 3456789999999999999999999999999987754
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-39 Score=337.11 Aligned_cols=247 Identities=17% Similarity=0.230 Sum_probs=194.5
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeec--CCeeEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCE--GDERLL 130 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~--~~~~~l 130 (491)
+..|.++..||.|+||+||++.. .++..||+|++...... ....+..|+.++..|+|||||+++++|.. ...+||
T Consensus 12 l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyI 91 (1021)
T PTZ00266 12 LNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYI 91 (1021)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEE
Confidence 45678889999999999999994 45788999998754322 24578899999999999999999998854 356899
Q ss_pred EEecCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhCC------CcccccccccceeeCC-----------
Q 011184 131 VAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKG------RALYHDLNAYRILFDE----------- 191 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~------~iiH~Dlkp~Nill~~----------- 191 (491)
||||+++++|.++|... ....+++..++.|+.||+.||.|||+.+ .||||||||+||||+.
T Consensus 92 VMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~ 171 (1021)
T PTZ00266 92 LMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQ 171 (1021)
T ss_pred EEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccccc
Confidence 99999999999988642 1356999999999999999999999832 2999999999999964
Q ss_pred ------CCCeEEccCCCcccCCCC---CccccCCCCCCcccccC--CCCCCCccchhHHHHHHHHHhCCCCCCCchh-hH
Q 011184 192 ------DGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DL 259 (491)
Q Consensus 192 ------~~~~kl~Dfgla~~~~~~---~~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~vl~elltg~~~~~~~~~-~~ 259 (491)
.+.+||+|||++...... ....||+.|+|||++.+ ..++.++||||||||||+|++|..||..... ..
T Consensus 172 ~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~q 251 (1021)
T PTZ00266 172 ANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQ 251 (1021)
T ss_pred ccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHH
Confidence 345899999998765332 23468999999999864 3488999999999999999999998864321 11
Q ss_pred hhhccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 260 IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
+.. .+.... .......+.++.+||..||+.+|.+||++.+++.
T Consensus 252 li~-~lk~~p-----~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 252 LIS-ELKRGP-----DLPIKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred HHH-HHhcCC-----CCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 111 011100 0111234578999999999999999999999985
|
|
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-39 Score=309.24 Aligned_cols=239 Identities=19% Similarity=0.272 Sum_probs=196.3
Q ss_pred ccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCCHH
Q 011184 63 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLA 141 (491)
Q Consensus 63 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 141 (491)
..||.|+||.||++.. .++..||||.+........+.+.+|+.+++.++||||+++++.+..++..++||||+++++|.
T Consensus 28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (292)
T cd06658 28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALT 107 (292)
T ss_pred hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHH
Confidence 5679999999999995 468899999987554444567889999999999999999999999999999999999999999
Q ss_pred HHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----CCccccCCC
Q 011184 142 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTNLA 217 (491)
Q Consensus 142 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~t~~ 217 (491)
+++. ...+++..+..++.||+.||.|||+++ ++||||||+||+++.++.++|+|||++..... .....++..
T Consensus 108 ~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~ 183 (292)
T cd06658 108 DIVT---HTRMNEEQIATVCLSVLRALSYLHNQG-VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPY 183 (292)
T ss_pred HHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCcc
Confidence 9884 346899999999999999999999998 99999999999999999999999998865322 123457889
Q ss_pred CCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCCC
Q 011184 218 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 297 (491)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp 297 (491)
|+|||.+.+..++.++||||||+++|||++|..|+................ .... ......+..+.+++.+||..||
T Consensus 184 y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~li~~~l~~~P 260 (292)
T cd06658 184 WMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNL-PPRV--KDSHKVSSVLRGFLDLMLVREP 260 (292)
T ss_pred ccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC-CCcc--ccccccCHHHHHHHHHHccCCh
Confidence 999999988889999999999999999999999876543221111111111 1111 1122345689999999999999
Q ss_pred CCCCChhHHHH
Q 011184 298 RERPNPKSLVT 308 (491)
Q Consensus 298 ~~Rps~~~il~ 308 (491)
.+|||++++++
T Consensus 261 ~~Rpt~~~il~ 271 (292)
T cd06658 261 SQRATAQELLQ 271 (292)
T ss_pred hHCcCHHHHhh
Confidence 99999999998
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-39 Score=308.32 Aligned_cols=251 Identities=18% Similarity=0.276 Sum_probs=198.7
Q ss_pred CCccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 55 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
.+..+.+++.||.|+||.||++.. .++..||+|.+..... .....+.+|+.+++.++||||+++++++..++..++||
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 83 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 83 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence 356688889999999999999995 4588999999865432 23456789999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC---
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 209 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 209 (491)
||++ ++|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 84 e~~~-~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 160 (301)
T cd07873 84 EYLD-KDLKQYLDD-CGNSINMHNVKLFLFQLLRGLNYCHRRK-VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT 160 (301)
T ss_pred eccc-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCc
Confidence 9997 689888864 2356889999999999999999999998 999999999999999999999999998754322
Q ss_pred -CccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcc-----------ccccccc-----
Q 011184 210 -KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------LQMLTDS----- 271 (491)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~-----------~~~~~~~----- 271 (491)
....+++.|+|||.+.+. .++.++||||||+++|+|++|+.||............ ...+...
T Consensus 161 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (301)
T cd07873 161 YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKS 240 (301)
T ss_pred ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccc
Confidence 223467899999998754 4788999999999999999999888654322111000 0000000
Q ss_pred -ccc-------CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 272 -CLE-------GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 272 -~~~-------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
... ......++..+.+||.+||+.||.+|||+.+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 241 YNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred cccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000 0112245678999999999999999999999987
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=300.74 Aligned_cols=242 Identities=18% Similarity=0.275 Sum_probs=205.5
Q ss_pred ccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 59 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
|.+-+.||+|-|.+|-+++ .-+|..||||++.+..... ...+.+|++.|+.++|||||++|.+......+|||+|.=
T Consensus 20 YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELG 99 (864)
T KOG4717|consen 20 YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELG 99 (864)
T ss_pred ehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEec
Confidence 3344567999999999998 4589999999997655443 457889999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeC-CCCCeEEccCCCcccCCCCC---c
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDGK---S 211 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~~~---~ 211 (491)
++|+|.+|+.+. ...+.+....+++.||+.|+.|+|... +|||||||+||++- .-|-+||.|||++-.+.++. +
T Consensus 100 D~GDl~DyImKH-e~Gl~E~La~kYF~QI~~AI~YCHqLH-VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~T 177 (864)
T KOG4717|consen 100 DGGDLFDYIMKH-EEGLNEDLAKKYFAQIVHAISYCHQLH-VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTT 177 (864)
T ss_pred CCchHHHHHHhh-hccccHHHHHHHHHHHHHHHHHHhhhh-hhcccCCcceeEEeeecCceEeeeccccccCCCcchhhc
Confidence 999999999763 356899999999999999999999996 99999999998875 67899999999988776653 6
Q ss_pred cccCCCCCCcccccCCCCC-CCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVT-PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~-~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
.+|++.|.|||++.|..|+ ++.||||||||||.|.+|++||......... ..+.+. .-..|..++.++.+||.
T Consensus 178 sCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETL----TmImDC--KYtvPshvS~eCrdLI~ 251 (864)
T KOG4717|consen 178 SCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETL----TMIMDC--KYTVPSHVSKECRDLIQ 251 (864)
T ss_pred ccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhh----hhhhcc--cccCchhhhHHHHHHHH
Confidence 6899999999999998875 5899999999999999999998654332222 222221 12457788899999999
Q ss_pred HhccCCCCCCCChhHHHH
Q 011184 291 RCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~ 308 (491)
.||..||++|.+.++|..
T Consensus 252 sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 252 SMLVRDPKKRASLEEIVS 269 (864)
T ss_pred HHHhcCchhhccHHHHhc
Confidence 999999999999999986
|
|
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=313.14 Aligned_cols=242 Identities=12% Similarity=0.138 Sum_probs=188.9
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
.|++++.||+|+||.||+|... ++..||+|+.... ....|+.++++++||||+++++++...+..++|||++.
T Consensus 67 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 140 (357)
T PHA03209 67 GYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS 140 (357)
T ss_pred CcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC
Confidence 4677888899999999999954 5788999985432 34579999999999999999999999999999999996
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC---CCccc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---GKSYS 213 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---~~~~~ 213 (491)
++|.+++.. ....+++..+..|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .....
T Consensus 141 -~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 217 (357)
T PHA03209 141 -SDLYTYLTK-RSRPLPIDQALIIEKQILEGLRYLHAQR-IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLA 217 (357)
T ss_pred -CcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEecCccccccccCccccccc
Confidence 788888864 3457899999999999999999999998 99999999999999999999999999875332 23456
Q ss_pred cCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchh----hH-------hhhc-ccccccccccc-------
Q 011184 214 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL----DL-------IRDR-NLQMLTDSCLE------- 274 (491)
Q Consensus 214 ~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~----~~-------~~~~-~~~~~~~~~~~------- 274 (491)
||+.|+|||++.+..++.++|||||||++|||+++..++..... .. +... ...........
T Consensus 218 gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 297 (357)
T PHA03209 218 GTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRL 297 (357)
T ss_pred ccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHH
Confidence 88999999999988999999999999999999997655422100 00 0000 00000000000
Q ss_pred ---------------CC----CCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 275 ---------------GQ----FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 275 ---------------~~----~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.. -....+.++..||.+||+.||.+|||+.+++.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~ 350 (357)
T PHA03209 298 VRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILN 350 (357)
T ss_pred HHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhc
Confidence 00 00123456778999999999999999999987
|
|
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=302.98 Aligned_cols=243 Identities=18% Similarity=0.271 Sum_probs=201.2
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
.+..++.||.|+||.||+|.. .++..||||.+..... .....+.+|+.+++.+.||||+++++++..++..++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 355667889999999999995 4588999999875432 23457889999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----Cc
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 211 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 211 (491)
+|++|.+++. ..++++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 85 ~~~~L~~~i~---~~~l~~~~~~~~~~~l~~~l~~lh~~~-ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (277)
T cd06640 85 GGGSALDLLR---AGPFDEFQIATMLKEILKGLDYLHSEK-KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT 160 (277)
T ss_pred CCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCcCCChhhEEEcCCCCEEEcccccceeccCCcccccc
Confidence 9999999985 356889999999999999999999998 999999999999999999999999998654332 22
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
..++..|+|||++.+..++.++|+||||+++|+|++|..|+........... .........+...+..+.+++.+
T Consensus 161 ~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~li~~ 235 (277)
T cd06640 161 FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFL-----IPKNNPPTLTGEFSKPFKEFIDA 235 (277)
T ss_pred ccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhh-----hhcCCCCCCchhhhHHHHHHHHH
Confidence 3567889999999888899999999999999999999988754332211111 11111223445677899999999
Q ss_pred hccCCCCCCCChhHHHHH
Q 011184 292 CLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~~ 309 (491)
||+.+|++||++.+++..
T Consensus 236 ~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 236 CLNKDPSFRPTAKELLKH 253 (277)
T ss_pred HcccCcccCcCHHHHHhC
Confidence 999999999999999874
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=308.66 Aligned_cols=245 Identities=20% Similarity=0.208 Sum_probs=199.3
Q ss_pred ccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCC---ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 59 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
+++++.+|.|++|+||++... +++.||+|.+...... ..+.+..|+++++.++||||+++++++..++..++||||
T Consensus 3 y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 82 (316)
T cd05574 3 FKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDY 82 (316)
T ss_pred eEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEe
Confidence 456677899999999999954 5899999999764432 345688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-----
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 209 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----- 209 (491)
+.|++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 83 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (316)
T cd05574 83 CPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG-IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVS 161 (316)
T ss_pred cCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC-eeccCCChHHeEEcCCCCEEEeecchhhcccccccccc
Confidence 99999999987544467899999999999999999999998 999999999999999999999999987643211
Q ss_pred ----------------------------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhh
Q 011184 210 ----------------------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR 261 (491)
Q Consensus 210 ----------------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~ 261 (491)
....|+..|+|||++.+..++.++||||||+++|+|++|..|+.........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~ 241 (316)
T cd05574 162 KALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETF 241 (316)
T ss_pred cccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHH
Confidence 1235678899999999888999999999999999999999988654332211
Q ss_pred hccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCC----hhHHHH
Q 011184 262 DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN----PKSLVT 308 (491)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps----~~~il~ 308 (491)
.... ............+..+.+++.+||..||++||| +++++.
T Consensus 242 ~~~~----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 242 SNIL----KKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred HHHh----cCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 1111 111111111125689999999999999999999 777776
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-39 Score=318.74 Aligned_cols=243 Identities=16% Similarity=0.195 Sum_probs=194.4
Q ss_pred cccccccCCCCCccEEEEEEEC---CCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE---NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
.++++..||.|+||.||++... .+..||+|.+... ....+|+++++.++||||+++++++...+..++|||+
T Consensus 93 ~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~ 167 (392)
T PHA03207 93 QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPK 167 (392)
T ss_pred ceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehh
Confidence 4788899999999999999843 3578999988543 2456899999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-----
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 209 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----- 209 (491)
+. ++|.+++. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.++|+|||++......
T Consensus 168 ~~-~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH~~g-ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~ 243 (392)
T PHA03207 168 YK-CDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLHGRG-IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQ 243 (392)
T ss_pred cC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEcCCCCEEEccCccccccCccccccc
Confidence 96 78888884 3467999999999999999999999999 999999999999999999999999998754332
Q ss_pred -CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhH----hh---hc-c-----c----------
Q 011184 210 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL----IR---DR-N-----L---------- 265 (491)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~----~~---~~-~-----~---------- 265 (491)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.+..... +. .. . .
T Consensus 244 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~ 323 (392)
T PHA03207 244 CYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCK 323 (392)
T ss_pred ccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHH
Confidence 23468999999999998889999999999999999999999886532110 00 00 0 0
Q ss_pred --cccccc-cccCCC-----CchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 266 --QMLTDS-CLEGQF-----TDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 266 --~~~~~~-~~~~~~-----~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
...... ...... ....+.++.++|.+||..||++|||+.+++..
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 324 HFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000 000000 11245678899999999999999999999984
|
|
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=300.68 Aligned_cols=250 Identities=23% Similarity=0.320 Sum_probs=200.5
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
.++++..+|.|++|+||++.. .++..+++|++..... .....+.+|+++++.++|+||+++++.+..++..++|||++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~ 81 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYL 81 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEecc
Confidence 356677789999999999994 4688999999865432 24567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-----
Q 011184 136 PNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 209 (491)
Q Consensus 136 ~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----- 209 (491)
++++|.+++..... ..+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||++......
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~-i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~ 160 (267)
T cd06610 82 SGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG-QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTR 160 (267)
T ss_pred CCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccc
Confidence 99999999964322 46899999999999999999999998 999999999999999999999999987654332
Q ss_pred ---CccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHH
Q 011184 210 ---KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 285 (491)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (491)
....++..|++||.+... .++.++|+||||+++++|++|+.|+.............................+..+
T Consensus 161 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (267)
T cd06610 161 KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSF 240 (267)
T ss_pred cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHHH
Confidence 223578899999998876 6899999999999999999999887543221111111111111111111123566889
Q ss_pred HHHHHHhccCCCCCCCChhHHHH
Q 011184 286 VRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.+++.+||..||++|||+.+++.
T Consensus 241 ~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 241 RKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred HHHHHHHcCCChhhCcCHHHHhh
Confidence 99999999999999999999987
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-40 Score=318.36 Aligned_cols=242 Identities=19% Similarity=0.266 Sum_probs=202.8
Q ss_pred ccccCCCCCccEEEEEEECC--CC--EEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 61 IVSEHGEKAPNVVYKGKLEN--QR--RIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~~~~--~~--~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
+.+.||+|.||+|++|.|.. |+ .||||+++.+... ....|++|+.+|.+|+|||++++||+..+ ....||||++
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELa 192 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELA 192 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhc
Confidence 34677999999999999743 43 5899999876655 46789999999999999999999999877 7789999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCCccc--
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS-- 213 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~-- 213 (491)
+.|||.+.|++.....+.......++.||+.||.||.+++ +|||||-..|+|+-....+||+||||.+.......+.
T Consensus 193 plGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr-lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm 271 (1039)
T KOG0199|consen 193 PLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR-LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVM 271 (1039)
T ss_pred ccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh-hhhhhhhhhhheecccceeeeecccceeccCCCCcceEe
Confidence 9999999998755567888899999999999999999998 9999999999999999999999999998766544322
Q ss_pred -----cCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCC-CCCCCchhhHhhhccccccccccccCCCCchhHHHHHH
Q 011184 214 -----TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK-HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 287 (491)
Q Consensus 214 -----~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (491)
....|+|||.+...+++.+||||+|||+||||+|+. .|+.+.....+.. .++.......++.+++++++
T Consensus 272 ~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~-----~iD~~erLpRPk~csedIY~ 346 (1039)
T KOG0199|consen 272 APQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILK-----NIDAGERLPRPKYCSEDIYQ 346 (1039)
T ss_pred cCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHH-----hccccccCCCCCCChHHHHH
Confidence 246899999999999999999999999999999965 4555543322221 12233333457788999999
Q ss_pred HHHHhccCCCCCCCChhHHHHH
Q 011184 288 LASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~ 309 (491)
++..||..+|.+||||..|.+.
T Consensus 347 imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 347 IMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred HHHHhccCCccccccHHHHHHh
Confidence 9999999999999999999743
|
|
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=301.11 Aligned_cols=244 Identities=18% Similarity=0.252 Sum_probs=198.5
Q ss_pred ccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCC------ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 59 ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP------DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
+.+...+|.|+||.||+|...+++.+|||.+...... ....+.+|+++++.++|+||+++++++...+..++||
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM 81 (265)
T ss_pred ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence 3455677999999999999878899999998643321 1245889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---- 208 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---- 208 (491)
||+++++|.+++.. ..++++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 158 (265)
T cd06631 82 EFVPGGSISSILNR--FGPLPEPVFCKYTKQILDGVAYLHNNC-VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLH 158 (265)
T ss_pred ecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcCHHhEEECCCCeEEeccchhhHhhhhcccc
Confidence 99999999999963 356889999999999999999999998 99999999999999999999999998764321
Q ss_pred ------CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhH
Q 011184 209 ------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 282 (491)
Q Consensus 209 ------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (491)
.....++..|+|||.+.+..++.++||||||+++++|++|..|+........... .. .........+...+
T Consensus 159 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~ 235 (265)
T cd06631 159 GTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFY-IG--AHRGLMPRLPDSFS 235 (265)
T ss_pred ccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHH-hh--hccCCCCCCCCCCC
Confidence 1234578899999999988899999999999999999999988754221110000 00 00011123345567
Q ss_pred HHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 283 TELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 283 ~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.++.+++.+||+.+|.+||++.+++.
T Consensus 236 ~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 236 AAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred HHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 88999999999999999999999986
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=317.32 Aligned_cols=235 Identities=19% Similarity=0.210 Sum_probs=187.8
Q ss_pred CCCCCccEEEEEEE-CCCCEEEEEEeCCCCC---CChhHHHHHHHHHhcc---CCCCcceEEeEeecCCeeEEEEecCCC
Q 011184 65 HGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQL---RNNRLTNLLGCCCEGDERLLVAEYMPN 137 (491)
Q Consensus 65 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l---~H~niv~~~~~~~~~~~~~lv~e~~~~ 137 (491)
||+|+||+||++.. .+++.||||++..... .....+..|..++..+ +||||+.+++++..++..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 59999999999994 4689999999864321 1233455677777665 699999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----CCccc
Q 011184 138 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYS 213 (491)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~ 213 (491)
|+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.++|+|||++..... .....
T Consensus 81 g~L~~~l~~--~~~~~~~~~~~~~~qil~al~~LH~~~-ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 157 (330)
T cd05586 81 GELFWHLQK--EGRFSEDRAKFYIAELVLALEHLHKYD-IVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFC 157 (330)
T ss_pred ChHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCcc
Confidence 999998863 457899999999999999999999999 99999999999999999999999999875322 22456
Q ss_pred cCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCC-chhHHHHHHHHHH
Q 011184 214 TNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT-DDDGTELVRLASR 291 (491)
Q Consensus 214 ~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~ 291 (491)
||+.|+|||++.+. .++.++|||||||++|+|++|..||................. .++ ...+.++.+++.+
T Consensus 158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~------~~~~~~~~~~~~~li~~ 231 (330)
T cd05586 158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKV------RFPKNVLSDEGRQFVKG 231 (330)
T ss_pred CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCC------CCCCccCCHHHHHHHHH
Confidence 89999999998764 478999999999999999999999876543322211111100 111 2356789999999
Q ss_pred hccCCCCCCCC----hhHHHH
Q 011184 292 CLQYEPRERPN----PKSLVT 308 (491)
Q Consensus 292 cl~~dp~~Rps----~~~il~ 308 (491)
||+.||.+||+ +.++++
T Consensus 232 ~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 232 LLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred HcCCCHHHCCCCCCCHHHHhc
Confidence 99999999984 556654
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=299.35 Aligned_cols=244 Identities=16% Similarity=0.215 Sum_probs=202.3
Q ss_pred ccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCC--CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 59 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
|.+++.+|.|+||.||++. ..+|+.||+|.+..... .....+.+|+.++++++||||+++++++...+..++||||+
T Consensus 2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08218 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYC 81 (256)
T ss_pred ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecC
Confidence 4567788999999999999 45689999999864322 23457899999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC----c
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----S 211 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~ 211 (491)
++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... .
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~ 160 (256)
T cd08218 82 EGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELART 160 (256)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhh
Confidence 9999999986534446889999999999999999999998 9999999999999999999999999987654322 2
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
..+++.|+|||.+.+..++.++|+||||+++++|++|+.|+................ ....+...+.++.+++.+
T Consensus 161 ~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~ 235 (256)
T cd08218 161 CIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGS-----YPPVSSHYSYDLRNLVSQ 235 (256)
T ss_pred ccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCC-----CCCCcccCCHHHHHHHHH
Confidence 357788999999988889999999999999999999998876443322221111111 112344566789999999
Q ss_pred hccCCCCCCCChhHHHH
Q 011184 292 CLQYEPRERPNPKSLVT 308 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~ 308 (491)
||+.+|.+||++.++++
T Consensus 236 ~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 236 LFKRNPRDRPSVNSILE 252 (256)
T ss_pred HhhCChhhCcCHHHHhh
Confidence 99999999999999987
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-39 Score=304.67 Aligned_cols=242 Identities=18% Similarity=0.292 Sum_probs=198.3
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
+.++..||.|+||.||+|.. .++..||+|.+..... .....+.+|+++++.++||||+++++++..++..++||||++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence 34556779999999999985 4578999999864432 224568899999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC----cc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SY 212 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~~ 212 (491)
+++|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... ..
T Consensus 86 ~~~L~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~-ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (277)
T cd06642 86 GGSALDLLK---PGPLEETYIATILREILKGLDYLHSER-KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF 161 (277)
T ss_pred CCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcCC-eeccCCChheEEEeCCCCEEEccccccccccCcchhhhcc
Confidence 999999884 457899999999999999999999998 9999999999999999999999999987644322 23
Q ss_pred ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 011184 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 292 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 292 (491)
.++..|+|||++.+..++.++||||||+++++|++|+.|+.......... .+ ............+.++.+++.+|
T Consensus 162 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~li~~~ 236 (277)
T cd06642 162 VGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF----LI-PKNSPPTLEGQYSKPFKEFVEAC 236 (277)
T ss_pred cCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHh----hh-hcCCCCCCCcccCHHHHHHHHHH
Confidence 46788999999998889999999999999999999998765332111111 11 11111223345667899999999
Q ss_pred ccCCCCCCCChhHHHHH
Q 011184 293 LQYEPRERPNPKSLVTA 309 (491)
Q Consensus 293 l~~dp~~Rps~~~il~~ 309 (491)
|+.+|.+||++.+++..
T Consensus 237 l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 237 LNKDPRFRPTAKELLKH 253 (277)
T ss_pred ccCCcccCcCHHHHHHh
Confidence 99999999999999984
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-39 Score=306.66 Aligned_cols=248 Identities=18% Similarity=0.259 Sum_probs=200.0
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
++++++.||+|+||.||++... ++..||+|.+..... .....+.+|++++++++||||+++++++..++..++||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 4678889999999999999964 689999999865321 22457889999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccC-CCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccccceeeCCCCCeEEccCCCcccCCC--CCc
Q 011184 136 PNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKS 211 (491)
Q Consensus 136 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--~~~ 211 (491)
++++|..++.... ...+++..+..++.|++.||.|||+ .+ ++|+||||+||+++.++.++|+|||++..... ...
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 160 (286)
T cd06622 82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN-IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKT 160 (286)
T ss_pred CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC-EeeCCCCHHHEEECCCCCEEEeecCCcccccCCcccc
Confidence 9999998886421 2378999999999999999999997 47 99999999999999999999999999875432 223
Q ss_pred cccCCCCCCcccccCCC------CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHH
Q 011184 212 YSTNLAFTPPEYLRTGR------VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 285 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~------~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (491)
..++..|+|||.+.+.. ++.++|+|||||++|+|++|+.||........... ...+.. ......+..++.++
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~ 238 (286)
T cd06622 161 NIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQ-LSAIVD-GDPPTLPSGYSDDA 238 (286)
T ss_pred CCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHH-HHHHhh-cCCCCCCcccCHHH
Confidence 45778899999986543 48899999999999999999998864432221111 111111 11223455577899
Q ss_pred HHHHHHhccCCCCCCCChhHHHH
Q 011184 286 VRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.+++.+||+.+|++||++.+++.
T Consensus 239 ~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 239 QDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred HHHHHHHcccCcccCCCHHHHhc
Confidence 99999999999999999999987
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-39 Score=313.90 Aligned_cols=249 Identities=18% Similarity=0.168 Sum_probs=196.1
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
.+++++.||+|+||+||++... +++.||+|++.... ......+..|+.++..++|+||+++++++...+..++|||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD 81 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence 3567788899999999999954 57889999985421 1123458889999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 209 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 209 (491)
|+++|+|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 82 y~~~g~L~~~l~~-~~~~l~~~~~~~~~~qi~~al~~lH~~~-iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~ 159 (332)
T cd05623 82 YYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ 159 (332)
T ss_pred ccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEECCCCCEEEeecchheecccCCcce
Confidence 9999999999964 2356899999999999999999999999 999999999999999999999999998654222
Q ss_pred -CccccCCCCCCccccc-----CCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHH
Q 011184 210 -KSYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 283 (491)
Q Consensus 210 -~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (491)
....||+.|+|||++. ...++.++|||||||++|||++|+.||................... ........++.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~-~~p~~~~~~s~ 238 (332)
T cd05623 160 SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERF-QFPAQVTDVSE 238 (332)
T ss_pred ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccc-cCCCccccCCH
Confidence 2246899999999986 2457889999999999999999999987654322222211111000 01111234678
Q ss_pred HHHHHHHHhccCCCCC--CCChhHHHHH
Q 011184 284 ELVRLASRCLQYEPRE--RPNPKSLVTA 309 (491)
Q Consensus 284 ~~~~li~~cl~~dp~~--Rps~~~il~~ 309 (491)
++.+|+.+||..++.+ |+++.++++.
T Consensus 239 ~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 239 DAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred HHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 8999999999765544 6889999875
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=304.96 Aligned_cols=248 Identities=20% Similarity=0.247 Sum_probs=194.5
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
+.+++.||.|++|.||+|+. .++..||||+++..... ....+.+|+.++++++||||+++++++..++..++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (285)
T cd07861 2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFL 81 (285)
T ss_pred ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecC
Confidence 46677889999999999995 46899999998653322 2456889999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----C
Q 011184 136 PNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 210 (491)
Q Consensus 136 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 210 (491)
+ ++|.+++.... ...+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||++...... .
T Consensus 82 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (285)
T cd07861 82 S-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR-VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYT 159 (285)
T ss_pred C-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCCHHHEEEcCCCcEEECcccceeecCCCccccc
Confidence 7 68888886433 256899999999999999999999998 999999999999999999999999998754322 2
Q ss_pred ccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccc--------------------ccc
Q 011184 211 SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--------------------MLT 269 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~--------------------~~~ 269 (491)
...+++.|+|||.+.+. .++.++||||||+++++|+||+.|+.............. ...
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (285)
T cd07861 160 HEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTF 239 (285)
T ss_pred CCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhc
Confidence 23457889999988654 478899999999999999999988764321110000000 000
Q ss_pred cc---cccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 270 DS---CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 270 ~~---~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.. ..........++++.+++.+||..||.+|||+.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 240 PKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred cccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00 0000112235678899999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-39 Score=315.16 Aligned_cols=247 Identities=19% Similarity=0.272 Sum_probs=193.4
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC--CChhHHHHHHHHHhccCCCCcceEEeEeecC------Ce
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEG------DE 127 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~------~~ 127 (491)
..|.+++.||.|+||+||++.. .+++.||||++..... .....+.+|+.+++.++||||+++++++... ..
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07878 15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNE 94 (343)
T ss_pred hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCc
Confidence 4567788889999999999994 5688999999875332 1245678899999999999999999987543 34
Q ss_pred eEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC
Q 011184 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 207 (491)
Q Consensus 128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 207 (491)
.+++++++ +++|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 95 ~~~~~~~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~ 169 (343)
T cd07878 95 VYLVTNLM-GADLNNIVK---CQKLSDEHVQFLIYQLLRGLKYIHSAG-IIHRDLKPSNVAVNEDCELRILDFGLARQAD 169 (343)
T ss_pred EEEEeecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecccCChhhEEECCCCCEEEcCCccceecC
Confidence 68999998 789988874 457999999999999999999999999 9999999999999999999999999987654
Q ss_pred CC-CccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccc-----------ccc-----
Q 011184 208 DG-KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-----------MLT----- 269 (491)
Q Consensus 208 ~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~-----------~~~----- 269 (491)
.. ....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.............. .+.
T Consensus 170 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (343)
T cd07878 170 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHAR 249 (343)
T ss_pred CCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHH
Confidence 33 34568899999999876 4688999999999999999999988865422110000000 000
Q ss_pred ---cc---ccc---CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 270 ---DS---CLE---GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 270 ---~~---~~~---~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.. ... .......++.+.+|+.+||..||.+|||+.+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 250 KYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred HHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00 000 0001123456889999999999999999999997
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=298.64 Aligned_cols=244 Identities=18% Similarity=0.231 Sum_probs=200.4
Q ss_pred cccccccCCCCCccEEEEEEECC-CCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 58 VENIVSEHGEKAPNVVYKGKLEN-QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
.+++...+|.|++|.||++.... +..+++|.+..... ...+.+|+++++.++||||+++++++..+...++++||++
T Consensus 4 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 81 (256)
T cd06612 4 VFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCG 81 (256)
T ss_pred cchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCC
Confidence 34566777999999999999654 88999999865432 6789999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC----cc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SY 212 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~~ 212 (491)
+++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... ..
T Consensus 82 ~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~~l~~lh~~~-i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 159 (256)
T cd06612 82 AGSVSDIMKI-TNKTLTEEEIAAILYQTLKGLEYLHSNK-KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTV 159 (256)
T ss_pred CCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEECCCCcEEEcccccchhcccCccccccc
Confidence 9999999864 2457899999999999999999999998 9999999999999999999999999987654322 33
Q ss_pred ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 011184 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 292 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 292 (491)
.++..|+|||++.+..++.++||||||+++|+|++|+.|+.............. ........+...+..+.+++.+|
T Consensus 160 ~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~ 236 (256)
T cd06612 160 IGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPN---KPPPTLSDPEKWSPEFNDFVKKC 236 (256)
T ss_pred cCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhcc---CCCCCCCchhhcCHHHHHHHHHH
Confidence 467899999999988899999999999999999999988754322111100000 00111112334567899999999
Q ss_pred ccCCCCCCCChhHHHH
Q 011184 293 LQYEPRERPNPKSLVT 308 (491)
Q Consensus 293 l~~dp~~Rps~~~il~ 308 (491)
|+.||++|||+.+++.
T Consensus 237 l~~~P~~Rps~~~il~ 252 (256)
T cd06612 237 LVKDPEERPSAIQLLQ 252 (256)
T ss_pred HhcChhhCcCHHHHhc
Confidence 9999999999999987
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=307.91 Aligned_cols=242 Identities=17% Similarity=0.252 Sum_probs=183.4
Q ss_pred ccCCCCCccEEEEEEEC---CCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeec--CCeeEEEEecCCC
Q 011184 63 SEHGEKAPNVVYKGKLE---NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE--GDERLLVAEYMPN 137 (491)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~--~~~~~lv~e~~~~ 137 (491)
.+||+|+||+||+|... +++.||+|.+.... ....+.+|+.++++++||||+++++++.. +...++||||+.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~- 83 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE- 83 (317)
T ss_pred cccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-
Confidence 57899999999999853 46789999986543 23467899999999999999999999854 456899999996
Q ss_pred CCHHHHhccc-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceee----CCCCCeEEccCCCcccC
Q 011184 138 ETLAKHLFHW-------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF----DEDGNPRLSTFGLMKNS 206 (491)
Q Consensus 138 gsL~~~l~~~-------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill----~~~~~~kl~Dfgla~~~ 206 (491)
++|.+++... ....+++..+..++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++..
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~ 162 (317)
T cd07868 84 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLF 162 (317)
T ss_pred CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-EEcCCCCHHHEEEecCCCCcCcEEEeecCceecc
Confidence 6888876421 1235889999999999999999999999 9999999999999 45678999999998764
Q ss_pred CCC-------CccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHh---------hhcc-----
Q 011184 207 RDG-------KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI---------RDRN----- 264 (491)
Q Consensus 207 ~~~-------~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~---------~~~~----- 264 (491)
... ....+|+.|+|||++.+. .++.++|||||||++|+|++|++||........ ....
T Consensus 163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T cd07868 163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMG 242 (317)
T ss_pred CCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcC
Confidence 322 234678999999999774 488999999999999999999988753211000 0000
Q ss_pred ---------cccccc----------cccc--------CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 265 ---------LQMLTD----------SCLE--------GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 265 ---------~~~~~~----------~~~~--------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
...... .... .......+..+.+|+.+||+.||.+|||++++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~ 313 (317)
T cd07868 243 FPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 313 (317)
T ss_pred CCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000000 0000 0000112346889999999999999999999987
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=301.76 Aligned_cols=242 Identities=23% Similarity=0.355 Sum_probs=195.0
Q ss_pred cCCCCCccEEEEEEECC-------CCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 64 EHGEKAPNVVYKGKLEN-------QRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
.+|.|+||.||+|+..+ +..+|||.+..... .....+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 46999999999998532 25799998865432 23567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC-----CeEEccCCCccc
Q 011184 136 PNETLAKHLFHWE-----THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-----NPRLSTFGLMKN 205 (491)
Q Consensus 136 ~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-----~~kl~Dfgla~~ 205 (491)
++++|.+++.... ...+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++ .++|+|||++..
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~ 160 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH-FIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD 160 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC-cccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence 9999999986421 234788999999999999999999998 99999999999999877 899999999875
Q ss_pred CCCC------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCC
Q 011184 206 SRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 278 (491)
Q Consensus 206 ~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (491)
.... ....++..|+|||.+.++.++.++||||||+++|+|++ |..|+............ ........+
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~-----~~~~~~~~~ 235 (269)
T cd05044 161 IYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHV-----TAGGRLQKP 235 (269)
T ss_pred cccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHH-----hcCCccCCc
Confidence 4322 12234678999999998899999999999999999998 88777644322211111 011111234
Q ss_pred chhHHHHHHHHHHhccCCCCCCCChhHHHHHhc
Q 011184 279 DDDGTELVRLASRCLQYEPRERPNPKSLVTALS 311 (491)
Q Consensus 279 ~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~ 311 (491)
...+..+.+++.+||+.+|.+||++.++++.|+
T Consensus 236 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 236 ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 456788999999999999999999999999875
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-38 Score=297.52 Aligned_cols=244 Identities=18% Similarity=0.217 Sum_probs=201.0
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
|+++..||.|++|.||++.. .+++.+|||.+...... ....+.+|++++++++||||+++++.+..++..++||||+
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08220 2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYA 81 (256)
T ss_pred ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecC
Confidence 45677789999999999994 56889999998654322 3457889999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCC-CCeEEccCCCcccCCCC---Cc
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSRDG---KS 211 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~~~---~~ 211 (491)
++++|.+++.......+++..+..++.|++.+|.|||+++ ++|+||+|+||+++.+ +.++|+|||++...... ..
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~ 160 (256)
T cd08220 82 PGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL-ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYT 160 (256)
T ss_pred CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccc
Confidence 9999999997544456899999999999999999999998 9999999999999854 46899999998765432 23
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
..++..|+|||.+.+..++.++||||||+++|+|++|+.|+............... .....+...+.++.+++.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~ 235 (256)
T cd08220 161 VVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSG-----TFAPISDRYSPDLRQLILS 235 (256)
T ss_pred cccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhc-----CCCCCCCCcCHHHHHHHHH
Confidence 45788999999999888999999999999999999999887654332222111111 1112334566789999999
Q ss_pred hccCCCCCCCChhHHHH
Q 011184 292 CLQYEPRERPNPKSLVT 308 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~ 308 (491)
||+.+|.+|||+.+++.
T Consensus 236 ~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 236 MLNLDPSKRPQLSQIMA 252 (256)
T ss_pred HccCChhhCCCHHHHhh
Confidence 99999999999999987
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=301.90 Aligned_cols=251 Identities=19% Similarity=0.257 Sum_probs=202.6
Q ss_pred cccccccCCCCCccEEEEEEEC-CCC----EEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQR----RIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
.++++..||+|+||+||+|... +|. .+|+|.+...... ....+.+|+.++++++||||+++++++.. ...++|
T Consensus 8 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v 86 (279)
T cd05057 8 ELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLI 86 (279)
T ss_pred HcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEE
Confidence 3566788899999999999953 333 5899988755432 24578899999999999999999999987 788999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCCc
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 211 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~ 211 (491)
|||+++|+|.+++.. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||+++.......
T Consensus 87 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~ 164 (279)
T cd05057 87 TQLMPLGCLLDYVRN-HKDNIGSQYLLNWCVQIAKGMSYLEEKR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEK 164 (279)
T ss_pred EecCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-EEecccCcceEEEcCCCeEEECCCcccccccCccc
Confidence 999999999999864 2346899999999999999999999998 99999999999999999999999999876543221
Q ss_pred ------cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHH
Q 011184 212 ------YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 284 (491)
Q Consensus 212 ------~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (491)
..++..|+|||.+....++.++|+||||+++||+++ |+.|+.......+....... .....+...+..
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 239 (279)
T cd05057 165 EYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKG-----ERLPQPPICTID 239 (279)
T ss_pred ceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCC-----CCCCCCCCCCHH
Confidence 112467999999988889999999999999999999 88887654433332221111 111223345578
Q ss_pred HHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 285 LVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 285 ~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
+.+++.+||..+|+.||++.++++.|..+...
T Consensus 240 ~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 240 VYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred HHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 99999999999999999999999999887553
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=300.99 Aligned_cols=247 Identities=19% Similarity=0.241 Sum_probs=196.0
Q ss_pred cccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--C--------hhHHHHHHHHHhccCCCCcceEEeEeecCCee
Q 011184 60 NIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--D--------PRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 128 (491)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~--------~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~ 128 (491)
.+.+.||.|++|.||+|.. .+|+.||||.++..... . .+.+.+|+.+++.++||||+++++++...+..
T Consensus 4 ~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (272)
T cd06629 4 VKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYL 83 (272)
T ss_pred eecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCce
Confidence 4456779999999999984 46899999988532111 0 23577899999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC
Q 011184 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 208 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 208 (491)
++||||+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++||||+|+||+++.++.++|+|||++.....
T Consensus 84 ~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 160 (272)
T cd06629 84 SIFLEYVPGGSIGSCLRT--YGRFEEQLVRFFTEQVLEGLAYLHSKG-ILHRDLKADNLLVDADGICKISDFGISKKSDD 160 (272)
T ss_pred EEEEecCCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhhCC-eeecCCChhhEEEcCCCeEEEeeccccccccc
Confidence 999999999999999974 357899999999999999999999998 99999999999999999999999999875432
Q ss_pred C------CccccCCCCCCcccccCCC--CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCch
Q 011184 209 G------KSYSTNLAFTPPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 280 (491)
Q Consensus 209 ~------~~~~~t~~y~aPE~~~~~~--~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (491)
. ....++..|+|||.+.... ++.++|+||||++++++++|..|+............................
T Consensus 161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (272)
T cd06629 161 IYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMN 240 (272)
T ss_pred cccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCcccccc
Confidence 2 2335778999999987654 7899999999999999999998875332211111111111111111222334
Q ss_pred hHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 281 DGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 281 ~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
++..+.+++.+||..+|.+|||+.+++..
T Consensus 241 ~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 241 LSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred CCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 56899999999999999999999999873
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-39 Score=306.98 Aligned_cols=240 Identities=20% Similarity=0.263 Sum_probs=197.8
Q ss_pred ccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCCHH
Q 011184 63 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLA 141 (491)
Q Consensus 63 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 141 (491)
..+|.|+||.||++.. .+++.||||.+........+.+.+|+.++..++||||+++++++..++..++||||+++++|.
T Consensus 27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~ 106 (297)
T cd06659 27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALT 106 (297)
T ss_pred hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHH
Confidence 4679999999999994 468999999997655445667889999999999999999999999999999999999999999
Q ss_pred HHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----CCccccCCC
Q 011184 142 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTNLA 217 (491)
Q Consensus 142 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~~~t~~ 217 (491)
+++. ...+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++..... .....++..
T Consensus 107 ~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~ 182 (297)
T cd06659 107 DIVS---QTRLNEEQIATVCESVLQALCYLHSQG-VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPY 182 (297)
T ss_pred HHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCcc
Confidence 9874 356899999999999999999999998 99999999999999999999999998865432 223457889
Q ss_pred CCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCCC
Q 011184 218 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 297 (491)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp 297 (491)
|+|||++.+..++.++||||||+++++|++|..|+........... ..... ..........+..+.+++.+||+.+|
T Consensus 183 y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~l~~~i~~~l~~~P 259 (297)
T cd06659 183 WMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR-LRDSP--PPKLKNAHKISPVLRDFLERMLTREP 259 (297)
T ss_pred ccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HhccC--CCCccccCCCCHHHHHHHHHHhcCCc
Confidence 9999999988899999999999999999999988754322111110 00000 01111223456789999999999999
Q ss_pred CCCCChhHHHHH
Q 011184 298 RERPNPKSLVTA 309 (491)
Q Consensus 298 ~~Rps~~~il~~ 309 (491)
++||++.++++.
T Consensus 260 ~~Rps~~~ll~~ 271 (297)
T cd06659 260 QERATAQELLDH 271 (297)
T ss_pred ccCcCHHHHhhC
Confidence 999999999984
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=303.88 Aligned_cols=248 Identities=21% Similarity=0.290 Sum_probs=196.4
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCC--CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
.++++..+|.|++|.||++... +|+.||+|++..... ...+.+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~ 81 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY 81 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence 3567788899999999999965 589999999864332 2235688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC----
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 210 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 210 (491)
+++++|..++. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~ql~~~l~~LH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (286)
T cd07847 82 CDHTVLNELEK--NPRGVPEHLIKKIIWQTLQAVNFCHKHN-CIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYT 158 (286)
T ss_pred cCccHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCChhhEEEcCCCcEEECccccceecCCCccccc
Confidence 99988887765 3456899999999999999999999998 9999999999999999999999999987654332
Q ss_pred ccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhh---ccc-----------------cccc
Q 011184 211 SYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD---RNL-----------------QMLT 269 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~---~~~-----------------~~~~ 269 (491)
...++..|+|||.+.+ ..++.++||||||+++|+|++|..||.+........ ... ....
T Consensus 159 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07847 159 DYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLS 238 (286)
T ss_pred CcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccccccc
Confidence 3456788999999876 457889999999999999999998876432211000 000 0000
Q ss_pred cccccC-----CCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 270 DSCLEG-----QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 270 ~~~~~~-----~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.+.... ......+..+.+|+.+||+.+|++||++.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 239 IPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred CCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 000000 011234678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=300.74 Aligned_cols=249 Identities=20% Similarity=0.306 Sum_probs=198.6
Q ss_pred cccccccCCCCCccEEEEEEEC------CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
.+.++..+|.|+||.||+++.. +...|++|.+...... ....+.+|++++++++||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 85 (275)
T cd05046 6 NLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYM 85 (275)
T ss_pred hceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceE
Confidence 4556778899999999999953 2467999988654432 24579999999999999999999999999899999
Q ss_pred EEecCCCCCHHHHhcccCC-------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCc
Q 011184 131 VAEYMPNETLAKHLFHWET-------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLM 203 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~-------~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 203 (491)
||||+++++|.+++..... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++++|||++
T Consensus 86 v~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~-i~H~dlkp~Nili~~~~~~~l~~~~~~ 164 (275)
T cd05046 86 ILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR-FVHRDLAARNCLVSSQREVKVSLLSLS 164 (275)
T ss_pred EEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC-cccCcCccceEEEeCCCcEEEcccccc
Confidence 9999999999999974331 15899999999999999999999999 999999999999999999999999997
Q ss_pred ccCCCC-----CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCC
Q 011184 204 KNSRDG-----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQF 277 (491)
Q Consensus 204 ~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (491)
...... ....++..|+|||.+.+...+.++||||||+++++|++ |..|+............ .........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~----~~~~~~~~~ 240 (275)
T cd05046 165 KDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRL----QAGKLELPV 240 (275)
T ss_pred cccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHH----HcCCcCCCC
Confidence 643221 22345677999999988888999999999999999999 56565432221111111 111111122
Q ss_pred CchhHHHHHHHHHHhccCCCCCCCChhHHHHHhc
Q 011184 278 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 311 (491)
Q Consensus 278 ~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~ 311 (491)
+..++..+.+++.+||+.+|.+|||+.+++..|.
T Consensus 241 ~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 241 PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 3456678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=297.33 Aligned_cols=245 Identities=28% Similarity=0.416 Sum_probs=198.9
Q ss_pred cccccCCCCCccEEEEEEECC-C----CEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 60 NIVSEHGEKAPNVVYKGKLEN-Q----RRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~~~-~----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
.++..+|.|+||.||++.... + ..||+|++...... ....+..|+.++..++|+||+++++++...+..+++||
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e 81 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME 81 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence 355778999999999999543 3 88999999765433 46689999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCCc--
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-- 211 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~-- 211 (491)
|+++++|.+++.......+++..+..++.|++.||.+||+.+ ++|+||||+||+++.++.++|+|||++........
T Consensus 82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~-~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 160 (258)
T smart00219 82 YMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN-FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYK 160 (258)
T ss_pred ccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC-eeecccccceEEEccCCeEEEcccCCceecccccccc
Confidence 999999999996433223899999999999999999999998 99999999999999999999999999876543311
Q ss_pred ---cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHH
Q 011184 212 ---YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 287 (491)
Q Consensus 212 ---~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (491)
..++..|+|||.+.+..++.++||||||+++++|++ |..|+............... .....+...+..+.+
T Consensus 161 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 235 (258)
T smart00219 161 KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKG-----YRLPKPENCPPEIYK 235 (258)
T ss_pred cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC-----CCCCCCCcCCHHHHH
Confidence 225678999999988889999999999999999999 66665543222221111111 111223346778999
Q ss_pred HHHHhccCCCCCCCChhHHHHHh
Q 011184 288 LASRCLQYEPRERPNPKSLVTAL 310 (491)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~L 310 (491)
++.+||..||++|||+.++++.|
T Consensus 236 ~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 236 LMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHHHHCcCChhhCcCHHHHHhhC
Confidence 99999999999999999998864
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=306.51 Aligned_cols=248 Identities=18% Similarity=0.167 Sum_probs=198.8
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC---CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
+++++.+|+|+||.||++.. .+++.|++|.+..... .....+.+|+++++.++||||+++++.+..++..++||||
T Consensus 3 y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 82 (305)
T cd05609 3 FETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEY 82 (305)
T ss_pred ceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEec
Confidence 45667789999999999995 4578999999875432 2245688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC------
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------ 208 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~------ 208 (491)
++|++|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++....
T Consensus 83 ~~g~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (305)
T cd05609 83 VEGGDCATLLKN--IGALPVDMARMYFAETVLALEYLHNYG-IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNL 159 (305)
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchHHEEECCCCCEEEeeCCCccccCcCccccc
Confidence 999999999963 356899999999999999999999998 99999999999999999999999998763110
Q ss_pred -------------CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccC
Q 011184 209 -------------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 275 (491)
Q Consensus 209 -------------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (491)
.....++..|+|||.+.+..++.++|+||||+++|+|++|..|+.+.....+.......... ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~---~~ 236 (305)
T cd05609 160 YEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIE---WP 236 (305)
T ss_pred cccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC---CC
Confidence 01234677899999998888999999999999999999999988755433322221111100 01
Q ss_pred CCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcc
Q 011184 276 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 312 (491)
Q Consensus 276 ~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~ 312 (491)
......+.++.+++.+||+.||++||++.++.+.|+.
T Consensus 237 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 237 EGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred CccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 1112456789999999999999999997666665543
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=301.20 Aligned_cols=250 Identities=23% Similarity=0.281 Sum_probs=199.6
Q ss_pred ccccccCCCCCccEEEEEEECC----CCEEEEEEeCCCC-CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 59 ENIVSEHGEKAPNVVYKGKLEN----QRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
+.+...+|.|+||.||+|...+ ...|+||...... ....+.+.+|+.+++.++||||+++++++.. +..++|||
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e 86 (270)
T cd05056 8 ITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVME 86 (270)
T ss_pred ceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEE
Confidence 4456777999999999998533 2468999886544 2234578999999999999999999998865 55789999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC---
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--- 210 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 210 (491)
|+++++|.+++... ...+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 87 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 164 (270)
T cd05056 87 LAPLGELRSYLQVN-KYSLDLASLILYSYQLSTALAYLESKR-FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYK 164 (270)
T ss_pred cCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccChheEEEecCCCeEEccCceeeeccccccee
Confidence 99999999999642 345899999999999999999999998 9999999999999999999999999987643322
Q ss_pred --ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHH
Q 011184 211 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 287 (491)
Q Consensus 211 --~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (491)
...++..|+|||.+....++.++||||||++++++++ |..||............... .....+..++..+.+
T Consensus 165 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 239 (270)
T cd05056 165 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENG-----ERLPMPPNCPPTLYS 239 (270)
T ss_pred cCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-----CcCCCCCCCCHHHHH
Confidence 1223467999999988889999999999999999996 88887654322211111111 111234456679999
Q ss_pred HHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 288 LASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
++.+||..+|.+|||+.+++..|+.+..+
T Consensus 240 li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 240 LMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred HHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 99999999999999999999999887543
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=306.67 Aligned_cols=247 Identities=25% Similarity=0.387 Sum_probs=197.2
Q ss_pred ccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCChh--HHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 59 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPR--QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
|++++.||+|+||+||++... +++.||+|++......... ...+|+.++++++||||+++++++......++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 467788999999999999954 4678999999765432221 2356999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccC----CCCCc
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS----RDGKS 211 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~----~~~~~ 211 (491)
++++|.+++. ....+++..+..++.||+.||.+||+.+ ++|+||||+||+++.++.++|+|||.+... .....
T Consensus 81 ~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~~-i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 157 (260)
T PF00069_consen 81 PGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSKG-IVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNP 157 (260)
T ss_dssp TTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHTT-EEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSS
T ss_pred cccccccccc--cccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccc
Confidence 9889999996 3467899999999999999999999998 999999999999999999999999998742 12234
Q ss_pred cccCCCCCCccccc-CCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccc-cccCCCCchhHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLR-TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS-CLEGQFTDDDGTELVRLA 289 (491)
Q Consensus 212 ~~~t~~y~aPE~~~-~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li 289 (491)
..++..|+|||++. +...+.++||||+|+++++|++|..|+................... ..........+..+.+++
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 237 (260)
T PF00069_consen 158 FVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLI 237 (260)
T ss_dssp SSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHH
Confidence 56788999999998 7789999999999999999999998887651111111100000000 000011112237899999
Q ss_pred HHhccCCCCCCCChhHHHH
Q 011184 290 SRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~ 308 (491)
.+||+.||++|||+.++++
T Consensus 238 ~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 238 KKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHHSSSSGGGSTTHHHHHT
T ss_pred HHHccCChhHCcCHHHHhc
Confidence 9999999999999999986
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=304.45 Aligned_cols=250 Identities=20% Similarity=0.295 Sum_probs=197.5
Q ss_pred ccccccCCCCCccEEEEEEE-CCCC----EEEEEEeCCCCCCC-hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQR----RIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
++.+..||+|+||.||++.. .+|. .||+|.+....... ...+.+|+.+++.++||||+++++++... ..++++
T Consensus 9 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~ 87 (303)
T cd05110 9 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVT 87 (303)
T ss_pred ceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cceeee
Confidence 34567789999999999984 3444 57899886543222 33688999999999999999999998654 467999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC--
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-- 210 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 210 (491)
||+++|+|.+++.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 88 e~~~~g~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~ 165 (303)
T cd05110 88 QLMPHGCLLDYVHE-HKDNIGSQLLLNWCVQIAKGMMYLEERR-LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE 165 (303)
T ss_pred hhcCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHhhcC-eeccccccceeeecCCCceEEccccccccccCcccc
Confidence 99999999999864 2346889999999999999999999998 9999999999999999999999999987643221
Q ss_pred ----ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHH
Q 011184 211 ----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 285 (491)
Q Consensus 211 ----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (491)
...++..|++||.+.+..++.++||||||+++|||++ |..|+............... .....+...+..+
T Consensus 166 ~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 240 (303)
T cd05110 166 YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKG-----ERLPQPPICTIDV 240 (303)
T ss_pred cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCC-----CCCCCCCCCCHHH
Confidence 2234568999999988889999999999999999998 77777654322221111100 0111123345789
Q ss_pred HHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 286 VRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
.+++.+||..+|++||++.++++.|..+...
T Consensus 241 ~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 241 YMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-38 Score=303.25 Aligned_cols=242 Identities=20% Similarity=0.252 Sum_probs=200.7
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC---CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
.+.+++.||.|++|.||++.. .+++.||+|++..... .....+.+|++++++++||||+++++++..++..++|||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME 81 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence 356678889999999999995 4689999999865322 234568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-Ccc
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSY 212 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~ 212 (491)
|+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++...... ...
T Consensus 82 ~~~~~~L~~~~~~--~~~l~~~~~~~~~~qil~~l~~lH~~~-i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~ 158 (290)
T cd05580 82 YVPGGELFSHLRK--SGRFPEPVARFYAAQVVLALEYLHSLD-IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTL 158 (290)
T ss_pred cCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCC
Confidence 9999999999864 367899999999999999999999998 999999999999999999999999998765443 334
Q ss_pred ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 011184 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 292 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 292 (491)
.+++.|+|||.+.+...+.++||||||+++|+|++|..|+............... ...++...+..+.+++.+|
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~ 232 (290)
T cd05580 159 CGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEG------KVRFPSFFSPDAKDLIRNL 232 (290)
T ss_pred CCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC------CccCCccCCHHHHHHHHHH
Confidence 5788999999998888899999999999999999999887654322211111111 1123445578999999999
Q ss_pred ccCCCCCCC-----ChhHHHH
Q 011184 293 LQYEPRERP-----NPKSLVT 308 (491)
Q Consensus 293 l~~dp~~Rp-----s~~~il~ 308 (491)
|..||.+|+ ++++++.
T Consensus 233 l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 233 LQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred ccCCHHHccCcccCCHHHHHc
Confidence 999999998 6677765
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-38 Score=303.73 Aligned_cols=245 Identities=20% Similarity=0.240 Sum_probs=197.8
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCC---hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
.+.++..+|.|++|+||++.. .+++.||+|++....... ...+.+|+++++.++||||++++++|..++..++|||
T Consensus 16 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e 95 (307)
T cd06607 16 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVME 95 (307)
T ss_pred hhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHH
Confidence 355667789999999999995 468999999986443222 3468899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCCccc
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS 213 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 213 (491)
|++ |+|.+++.. ....+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++..........
T Consensus 96 ~~~-g~l~~~~~~-~~~~l~~~~~~~~~~ql~~~L~~LH~~~-i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~~ 172 (307)
T cd06607 96 YCL-GSASDILEV-HKKPLQEVEIAAICHGALQGLAYLHSHE-RIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFV 172 (307)
T ss_pred hhC-CCHHHHHHH-cccCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcccEEECCCCCEEEeecCcceecCCCCCcc
Confidence 997 677776643 2456899999999999999999999998 9999999999999999999999999988766666667
Q ss_pred cCCCCCCccccc---CCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 214 TNLAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 214 ~t~~y~aPE~~~---~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
++..|+|||++. ...++.++||||||+++|+|++|..|+............... ......+...+..+.+++.
T Consensus 173 ~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~ 248 (307)
T cd06607 173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----DSPTLSSNDWSDYFRNFVD 248 (307)
T ss_pred CCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC----CCCCCCchhhCHHHHHHHH
Confidence 888999999874 355888999999999999999999887543221111110000 0011112345678999999
Q ss_pred HhccCCCCCCCChhHHHHH
Q 011184 291 RCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~ 309 (491)
+||+.+|++||++.+++..
T Consensus 249 ~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 249 SCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred HHhcCChhhCcCHHHHhcC
Confidence 9999999999999999873
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-38 Score=298.36 Aligned_cols=253 Identities=16% Similarity=0.171 Sum_probs=198.4
Q ss_pred CHHHHHHHhcCCccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhcc-CCCCcceEEeEe
Q 011184 45 TLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCC 122 (491)
Q Consensus 45 ~~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~ 122 (491)
+..++....++|...+.+. +|.|+||.||++.. .++..+|+|.+....... .|+.....+ +||||+++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~-lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~ 78 (267)
T PHA03390 5 SLSELVQFLKNCEIVKKLK-LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSV 78 (267)
T ss_pred HHHHHHHHHHhhcccccee-ecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEE
Confidence 3444555555665555554 69999999999994 568899999986543221 123333223 799999999999
Q ss_pred ecCCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC-CeEEccCC
Q 011184 123 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFG 201 (491)
Q Consensus 123 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfg 201 (491)
..++..++||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++.++ .++|+|||
T Consensus 79 ~~~~~~~iv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~~l~dfg 155 (267)
T PHA03390 79 TTLKGHVLIMDYIKDGDLFDLLKK--EGKLSEAEVKKIIRQLVEALNDLHKHN-IIHNDIKLENVLYDRAKDRIYLCDYG 155 (267)
T ss_pred ecCCeeEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEEeCCCCeEEEecCc
Confidence 999999999999999999999963 348999999999999999999999999 99999999999999888 99999999
Q ss_pred CcccCCCCCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchh
Q 011184 202 LMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 281 (491)
Q Consensus 202 la~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (491)
++..........++..|+|||++.+..++.++||||||+++++|++|+.|+.................. .....+...
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 233 (267)
T PHA03390 156 LCKIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQ--KKLPFIKNV 233 (267)
T ss_pred cceecCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhc--ccCCccccc
Confidence 988766666667899999999999888999999999999999999999888643222111111111111 111233457
Q ss_pred HHHHHHHHHHhccCCCCCCCC-hhHHHH
Q 011184 282 GTELVRLASRCLQYEPRERPN-PKSLVT 308 (491)
Q Consensus 282 ~~~~~~li~~cl~~dp~~Rps-~~~il~ 308 (491)
++.+.+++.+||+.+|.+||+ ++++++
T Consensus 234 ~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 234 SKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred CHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 789999999999999999995 699886
|
|
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-38 Score=302.16 Aligned_cols=240 Identities=20% Similarity=0.280 Sum_probs=197.1
Q ss_pred cccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCCH
Q 011184 62 VSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL 140 (491)
Q Consensus 62 i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gsL 140 (491)
...||.|++|.||++.. .+++.+++|++........+.+.+|+.+++.++||||+++++++..++..++|+||++|++|
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L 103 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGAL 103 (285)
T ss_pred ceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCH
Confidence 35669999999999994 56889999998755444456788999999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----CccccCC
Q 011184 141 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNL 216 (491)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~t~ 216 (491)
.+++.. .++++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++...... ....++.
T Consensus 104 ~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 179 (285)
T cd06648 104 TDIVTH---TRMNEEQIATVCLAVLKALSFLHAQG-VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTP 179 (285)
T ss_pred HHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCCc
Confidence 999853 56899999999999999999999999 999999999999999999999999987654322 2345788
Q ss_pred CCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCC
Q 011184 217 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 296 (491)
Q Consensus 217 ~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d 296 (491)
.|+|||.+.+..++.++||||||+++++|++|..|+................ .+ ....+...+..+.+++.+||+.+
T Consensus 180 ~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~l~~li~~~l~~~ 256 (285)
T cd06648 180 YWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNL-PP--KLKNLHKVSPRLRSFLDRMLVRD 256 (285)
T ss_pred cccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcC-CC--CCcccccCCHHHHHHHHHHcccC
Confidence 9999999988889999999999999999999998875433221111111110 00 11112235678999999999999
Q ss_pred CCCCCChhHHHH
Q 011184 297 PRERPNPKSLVT 308 (491)
Q Consensus 297 p~~Rps~~~il~ 308 (491)
|++|||+.++++
T Consensus 257 p~~Rpt~~~il~ 268 (285)
T cd06648 257 PAQRATAAELLN 268 (285)
T ss_pred hhhCcCHHHHcc
Confidence 999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=284.26 Aligned_cols=247 Identities=20% Similarity=0.289 Sum_probs=196.2
Q ss_pred ccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCC-CChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEEe
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e 133 (491)
.+.+.++.+|.|+.|+|++++.+ +|...|||.+.+... ...++++..++++..- +.|.||+.+|+|..+..+++.||
T Consensus 92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe 171 (391)
T KOG0983|consen 92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME 171 (391)
T ss_pred HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence 34567789999999999999954 589999999976542 2345677777776665 48999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC---
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--- 210 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 210 (491)
.|. ..+..++.. -.+++++..+-++...+..||.||..+..|||||+||+|||+|+.|++||||||++....+..
T Consensus 172 lMs-~C~ekLlkr-ik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAht 249 (391)
T KOG0983|consen 172 LMS-TCAEKLLKR-IKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHT 249 (391)
T ss_pred HHH-HHHHHHHHH-hcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccccc
Confidence 994 455555543 457899999999999999999999876449999999999999999999999999987765543
Q ss_pred ccccCCCCCCcccccC---CCCCCCccchhHHHHHHHHHhCCCCCCCchhhH-hhhccccccccccccCCCCchhHHHHH
Q 011184 211 SYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-IRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~---~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
...|-+.|||||.+.- ..|+.++||||||++++||.||+.|+.+...+. .....+...+ +++.. ...+++.++
T Consensus 250 rsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~eP-P~L~~--~~gFSp~F~ 326 (391)
T KOG0983|consen 250 RSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEP-PLLPG--HMGFSPDFQ 326 (391)
T ss_pred cccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCC-CCCCc--ccCcCHHHH
Confidence 3457789999998854 358899999999999999999999998743322 1122222222 22221 123778999
Q ss_pred HHHHHhccCCCCCCCChhHHHH
Q 011184 287 RLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~ 308 (491)
+|+..||++|+.+||.+.++++
T Consensus 327 ~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 327 SFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred HHHHHHhhcCcccCcchHHHhc
Confidence 9999999999999999999998
|
|
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=304.09 Aligned_cols=246 Identities=20% Similarity=0.268 Sum_probs=201.5
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
..+.+++.+|.|+||.||++.. .++..|++|.+........+.+.+|+.+++.++||||+++++++..++..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 4566778889999999999984 568899999987554445667899999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----Cc
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 211 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 211 (491)
++++|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 99 ~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~g-i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~ 174 (293)
T cd06647 99 AGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST 174 (293)
T ss_pred CCCcHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCC-EeeccCCHHHEEEcCCCCEEEccCcceeccccccccccc
Confidence 9999999985 346789999999999999999999999 999999999999999999999999987654332 23
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
..+++.|++||.+.+..++.++|+||||+++|++++|..||.......... ............+...+..+.+++.+
T Consensus 175 ~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~li~~ 251 (293)
T cd06647 175 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY---LIATNGTPELQNPEKLSAIFRDFLNR 251 (293)
T ss_pred ccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee---ehhcCCCCCCCCccccCHHHHHHHHH
Confidence 357788999999988889999999999999999999998886543211100 00001111111233456789999999
Q ss_pred hccCCCCCCCChhHHHHH
Q 011184 292 CLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~~ 309 (491)
||..+|++||++.+++..
T Consensus 252 ~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 252 CLEMDVEKRGSAKELLQH 269 (293)
T ss_pred HccCChhhCcCHHHHhcC
Confidence 999999999999999973
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=302.28 Aligned_cols=248 Identities=22% Similarity=0.305 Sum_probs=197.5
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC--CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
|++++.+|.|++|.||+|.. .+|+.||||++..... .....+.+|+.++++++||||+++++++..++..++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (286)
T cd07832 2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM 81 (286)
T ss_pred ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc
Confidence 56778889999999999995 4689999999975442 23567999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-----
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----- 210 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----- 210 (491)
+++|.+++... ..++++..++.++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 82 -~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (286)
T cd07832 82 -PSDLSEVLRDE-ERPLPEAQVKSYMRMLLKGVAYMHANG-IMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYS 158 (286)
T ss_pred -CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccc
Confidence 99999998642 367899999999999999999999999 9999999999999999999999999987654322
Q ss_pred ccccCCCCCCcccccCCC-CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccc--------------------cc
Q 011184 211 SYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM--------------------LT 269 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~--------------------~~ 269 (491)
...++..|+|||.+.+.. ++.++||||||+++++|++|.+++............... +.
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07832 159 HQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKIT 238 (286)
T ss_pred cccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhccc
Confidence 345788999999987544 688999999999999999997666543211100000000 00
Q ss_pred cc----cccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 270 DS----CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 270 ~~----~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
.. ........+.+..+.+++.+||..+|.+|||+++++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 239 FPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred CCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00 00001112445889999999999999999999999873
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-38 Score=301.17 Aligned_cols=245 Identities=14% Similarity=0.207 Sum_probs=194.6
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhcc-CCCCcceEEeEeec------CCeeE
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCE------GDERL 129 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~------~~~~~ 129 (491)
.++++..+|.|+||.||+|.. .+++.+|+|++.... .....+..|+.++.++ +||||+++++++.. .+..+
T Consensus 17 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 95 (282)
T cd06636 17 IFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLW 95 (282)
T ss_pred hhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEE
Confidence 345556779999999999995 568899999986543 2345688899999998 79999999999853 45789
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC-
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD- 208 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~- 208 (491)
++|||+++|+|.+++.......+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 96 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~-ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~ 174 (282)
T cd06636 96 LVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 174 (282)
T ss_pred EEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEeeCcchhhhhcc
Confidence 9999999999999997544556888899999999999999999999 99999999999999999999999999875432
Q ss_pred ---CCccccCCCCCCccccc-----CCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCch
Q 011184 209 ---GKSYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 280 (491)
Q Consensus 209 ---~~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (491)
.....+++.|+|||.+. ...++.++|||||||++|+|++|..|+......... ...............
T Consensus 175 ~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~ 250 (282)
T cd06636 175 VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL----FLIPRNPPPKLKSKK 250 (282)
T ss_pred ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh----hhHhhCCCCCCcccc
Confidence 23345788999999886 345788999999999999999999887543211100 011111111112234
Q ss_pred hHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 281 DGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 281 ~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
++.++.++|.+||+.||.+|||+.+|++
T Consensus 251 ~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 251 WSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred cCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 6678999999999999999999999976
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-38 Score=299.75 Aligned_cols=247 Identities=15% Similarity=0.176 Sum_probs=193.0
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhcc-CCCCcceEEeEee-----cCCeeEEE
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCC-----EGDERLLV 131 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~-----~~~~~~lv 131 (491)
+++++.||+|+||.||++.. .+++.+|+|++.... .....+.+|+.+++.+ +||||+++++++. .++..++|
T Consensus 20 ~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv 98 (286)
T cd06638 20 WEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLV 98 (286)
T ss_pred eeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEE
Confidence 45667789999999999995 458899999886432 2345688899999999 6999999999884 34568999
Q ss_pred EecCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC
Q 011184 132 AEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 209 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 209 (491)
|||++|++|.+++... ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++......
T Consensus 99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~ 177 (286)
T cd06638 99 LELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK-TIHRDVKGNNILLTTEGGVKLVDFGVSAQLTST 177 (286)
T ss_pred EeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC-ccccCCCHHhEEECCCCCEEEccCCceeecccC
Confidence 9999999999887532 2356889999999999999999999998 999999999999999999999999998754322
Q ss_pred ----CccccCCCCCCcccccC-----CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCch
Q 011184 210 ----KSYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 280 (491)
Q Consensus 210 ----~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (491)
....+++.|+|||++.. ..++.++|||||||++|+|++|+.|+............... . ......+..
T Consensus 178 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~-~--~~~~~~~~~ 254 (286)
T cd06638 178 RLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN-P--PPTLHQPEL 254 (286)
T ss_pred CCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcccc-C--CCcccCCCC
Confidence 23457889999998853 34788999999999999999999887543221110000000 0 001112233
Q ss_pred hHHHHHHHHHHhccCCCCCCCChhHHHHHh
Q 011184 281 DGTELVRLASRCLQYEPRERPNPKSLVTAL 310 (491)
Q Consensus 281 ~~~~~~~li~~cl~~dp~~Rps~~~il~~L 310 (491)
.+..+.+++.+||+.||++|||+.++++.+
T Consensus 255 ~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 255 WSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred cCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 456899999999999999999999999853
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=303.65 Aligned_cols=247 Identities=19% Similarity=0.237 Sum_probs=193.2
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
+++++.||.|++|.||++.. .+|..||+|.++..... ....+.+|+.++++++||||+++++++...+..++|+||+
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC 81 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence 45667889999999999995 46899999998653221 2356788999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----Cc
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 211 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 211 (491)
+ ++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ..
T Consensus 82 ~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (284)
T cd07839 82 D-QDLKKYFDS-CNGDIDPEIVKSFMFQLLKGLAFCHSHN-VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSA 158 (284)
T ss_pred C-CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCC
Confidence 7 688887754 2456899999999999999999999998 999999999999999999999999998764332 22
Q ss_pred cccCCCCCCcccccCCC-CCCCccchhHHHHHHHHHhCCCCCCC-chhhHhhhcc--------------cccccccccc-
Q 011184 212 YSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPS-HALDLIRDRN--------------LQMLTDSCLE- 274 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~-~~~~~~~~~~--------------~~~~~~~~~~- 274 (491)
..++..|+|||.+.+.. ++.++|||||||++|+|+||..|+.. .......... .....+....
T Consensus 159 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd07839 159 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYP 238 (284)
T ss_pred CccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccC
Confidence 34678899999987654 68999999999999999999887532 2111100000 0000000000
Q ss_pred --------CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 275 --------GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 275 --------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
......++.++.+++.+||+.||.+|||+++++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 239 MYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred CCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 1112345678999999999999999999999987
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-38 Score=297.34 Aligned_cols=242 Identities=18% Similarity=0.199 Sum_probs=193.6
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC-----ChhHHHHHHHHHhccCCCCcceEEeEeecC--CeeEE
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-----DPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLL 130 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--~~~~l 130 (491)
+.+...+|+|+||.||++.. .+++.||||.+...... ....+.+|+.++++++||||+++++++.+. ..+++
T Consensus 4 ~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (265)
T cd06652 4 WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSI 83 (265)
T ss_pred ceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEE
Confidence 44556679999999999995 55899999998532211 134688899999999999999999998764 46789
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC--
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-- 208 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 208 (491)
||||++|++|.+++.. ...+++.....++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 84 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~ 160 (265)
T cd06652 84 FMEHMPGGSIKDQLKS--YGALTENVTRKYTRQILEGVSYLHSNM-IVHRDIKGANILRDSVGNVKLGDFGASKRLQTIC 160 (265)
T ss_pred EEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEecCCCCEEECcCcccccccccc
Confidence 9999999999999863 346788899999999999999999998 99999999999999999999999998875431
Q ss_pred -----CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHH
Q 011184 209 -----GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 283 (491)
Q Consensus 209 -----~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (491)
.....++..|+|||.+.+..++.++||||||+++|+|++|+.|+........... ..........+...+.
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 236 (265)
T cd06652 161 LSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFK----IATQPTNPVLPPHVSD 236 (265)
T ss_pred ccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHH----HhcCCCCCCCchhhCH
Confidence 2234578899999999888899999999999999999999988754321111111 1111112234556667
Q ss_pred HHHHHHHHhccCCCCCCCChhHHHH
Q 011184 284 ELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 284 ~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.+.+++.+||. +|++||++++++.
T Consensus 237 ~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 237 HCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred HHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 89999999995 9999999999986
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-38 Score=297.71 Aligned_cols=241 Identities=18% Similarity=0.239 Sum_probs=192.0
Q ss_pred cccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC-----ChhHHHHHHHHHhccCCCCcceEEeEeec--CCeeEEE
Q 011184 60 NIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-----DPRQFLEEARSVGQLRNNRLTNLLGCCCE--GDERLLV 131 (491)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~H~niv~~~~~~~~--~~~~~lv 131 (491)
...+.+|+|+||.||++.. .++..|++|++...... ....+.+|+.+++.++||||+++++++.. +...+++
T Consensus 5 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~ 84 (266)
T cd06651 5 RRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIF 84 (266)
T ss_pred cccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEE
Confidence 3445669999999999995 56899999998643221 13468889999999999999999998865 3578899
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC--
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 209 (491)
+||+++++|.+++.. ...+++...+.++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++......
T Consensus 85 ~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~-i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 161 (266)
T cd06651 85 MEYMPGGSVKDQLKA--YGALTESVTRKYTRQILEGMSYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM 161 (266)
T ss_pred EeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEccCCCccccccccc
Confidence 999999999999863 356889999999999999999999998 999999999999999999999999998754321
Q ss_pred -----CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHH
Q 011184 210 -----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 284 (491)
Q Consensus 210 -----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (491)
....++..|+|||.+.+..++.++|||||||++|+|++|+.||........... .........++...++.
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 237 (266)
T cd06651 162 SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFK----IATQPTNPQLPSHISEH 237 (266)
T ss_pred cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHH----HhcCCCCCCCchhcCHH
Confidence 123477889999999988899999999999999999999988754321111111 11111123344556677
Q ss_pred HHHHHHHhccCCCCCCCChhHHHH
Q 011184 285 LVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 285 ~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
+..++ +||..+|++||++++++.
T Consensus 238 ~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 238 ARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred HHHHH-HHhcCChhhCcCHHHHhc
Confidence 88888 688889999999999986
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-39 Score=305.44 Aligned_cols=245 Identities=19% Similarity=0.257 Sum_probs=197.0
Q ss_pred ccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCC--CChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEEe
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e 133 (491)
..|+++++||.|+.+.||++...+.+.+|+|++..... .....|.+|+..|.+| .|.+|+++++|-..++.+|||||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 56889999999999999999987778899888754332 2356799999999999 59999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC---
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--- 210 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 210 (491)
|=+ .+|..+|.........| .++.+..|++.++.++|.+| |||.||||.|+|+- .|.+||+|||+|......+
T Consensus 441 ~Gd-~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~g-IVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI 516 (677)
T KOG0596|consen 441 CGD-IDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQHG-IVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSI 516 (677)
T ss_pred ccc-ccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHhc-eeecCCCcccEEEE-eeeEEeeeechhcccCccccce
Confidence 875 89999997644333334 77889999999999999999 99999999999986 4689999999998765543
Q ss_pred ---ccccCCCCCCcccccCC-----------CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCC
Q 011184 211 ---SYSTNLAFTPPEYLRTG-----------RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 276 (491)
Q Consensus 211 ---~~~~t~~y~aPE~~~~~-----------~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (491)
+.+||+.||+||.+... +.+.+|||||||||||+|+-|+.||..-. . ....+..+.++...-+
T Consensus 517 ~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~-n--~~aKl~aI~~P~~~Ie 593 (677)
T KOG0596|consen 517 VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII-N--QIAKLHAITDPNHEIE 593 (677)
T ss_pred eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH-H--HHHHHHhhcCCCcccc
Confidence 45799999999988532 26789999999999999999998764321 1 1223344555533333
Q ss_pred CCchhH-HHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 277 FTDDDG-TELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 277 ~~~~~~-~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
|+.--+ .++.+++..||+.||++|||..++|+
T Consensus 594 fp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 594 FPDIPENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred ccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 333222 23999999999999999999999998
|
|
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-38 Score=295.71 Aligned_cols=241 Identities=22% Similarity=0.248 Sum_probs=197.5
Q ss_pred ccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCC-----CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 61 IVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW-----PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
....||.|++|.||+|... ++..|++|.+..... ...+.+.+|+++++.++|+||+++++++..++..++|+||
T Consensus 4 ~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 83 (258)
T cd06632 4 KGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLEL 83 (258)
T ss_pred ccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEe
Confidence 3456799999999999965 789999999864331 1245788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC---Cc
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KS 211 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~ 211 (491)
+++++|.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||++...... ..
T Consensus 84 ~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~ 160 (258)
T cd06632 84 VPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYLHDRN-TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKS 160 (258)
T ss_pred cCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEccCccceeccccccccc
Confidence 999999999963 356889999999999999999999998 999999999999999999999999988764332 24
Q ss_pred cccCCCCCCcccccCCC-CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
..++..|++||.+.... ++.++|+||||+++|+|++|+.|+........... ..........+...++.+.+++.
T Consensus 161 ~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~li~ 236 (258)
T cd06632 161 FKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFK----IGRSKELPPIPDHLSDEAKDFIL 236 (258)
T ss_pred cCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHH----HHhcccCCCcCCCcCHHHHHHHH
Confidence 45788899999987766 89999999999999999999988754321111100 01101112334556788999999
Q ss_pred HhccCCCCCCCChhHHHH
Q 011184 291 RCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~ 308 (491)
+||+.+|.+||++.+++.
T Consensus 237 ~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 237 KCLQRDPSLRPTAAELLE 254 (258)
T ss_pred HHhhcCcccCcCHHHHhc
Confidence 999999999999999986
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-38 Score=319.50 Aligned_cols=246 Identities=17% Similarity=0.205 Sum_probs=186.8
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCC------CCcceEEeEeecC-CeeE
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRN------NRLTNLLGCCCEG-DERL 129 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H------~niv~~~~~~~~~-~~~~ 129 (491)
.|++++.||+|+||+||+|.. .+++.||||+++... .....+..|+++++.++| ++|+.+++++... ...+
T Consensus 130 ~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~ 208 (467)
T PTZ00284 130 RFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMC 208 (467)
T ss_pred cEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEE
Confidence 466778889999999999995 458899999996432 223456678888877755 4588898888765 5789
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccccceeeCCCC---------------
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDG--------------- 193 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~--------------- 193 (491)
+|||++ |++|.+++.. ...+++..+..|+.||+.||.|||+ .+ ||||||||+|||++.++
T Consensus 209 iv~~~~-g~~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~yLH~~~g-IiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~ 284 (467)
T PTZ00284 209 IVMPKY-GPCLLDWIMK--HGPFSHRHLAQIIFQTGVALDYFHTELH-LMHTDLKPENILMETSDTVVDPVTNRALPPDP 284 (467)
T ss_pred EEEecc-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcCC-eecCCCCHHHEEEecCCcccccccccccCCCC
Confidence 999998 6889888863 4579999999999999999999998 48 99999999999998665
Q ss_pred -CeEEccCCCcccCCC-CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhh---cccccc
Q 011184 194 -NPRLSTFGLMKNSRD-GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD---RNLQML 268 (491)
Q Consensus 194 -~~kl~Dfgla~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~---~~~~~~ 268 (491)
.+||+|||++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .....+
T Consensus 285 ~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~ 364 (467)
T PTZ00284 285 CRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRL 364 (467)
T ss_pred ceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCC
Confidence 499999998765332 335678999999999999999999999999999999999999886542211000 000000
Q ss_pred ----------------c------cccccC---------C-C-CchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 269 ----------------T------DSCLEG---------Q-F-TDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 269 ----------------~------~~~~~~---------~-~-~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
. .++... . . .......+.+||.+||+.||.+|||++++++
T Consensus 365 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 365 PSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred CHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence 0 000000 0 0 0011356789999999999999999999997
|
|
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-38 Score=304.22 Aligned_cols=242 Identities=16% Similarity=0.247 Sum_probs=182.5
Q ss_pred ccCCCCCccEEEEEEEC---CCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeec--CCeeEEEEecCCC
Q 011184 63 SEHGEKAPNVVYKGKLE---NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE--GDERLLVAEYMPN 137 (491)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~--~~~~~lv~e~~~~ 137 (491)
.+||+|+||+||+|... ++..||+|.+.... ....+.+|+++++.++||||+++++++.. +...++||||+.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~- 83 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE- 83 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-
Confidence 46799999999999954 35789999986543 23467899999999999999999999854 467899999997
Q ss_pred CCHHHHhccc-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceee----CCCCCeEEccCCCcccC
Q 011184 138 ETLAKHLFHW-------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF----DEDGNPRLSTFGLMKNS 206 (491)
Q Consensus 138 gsL~~~l~~~-------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill----~~~~~~kl~Dfgla~~~ 206 (491)
++|.+++... ....+++..+..++.||+.||.|||+.+ ++||||||+|||+ +.++.+||+|||+++..
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~ 162 (317)
T cd07867 84 HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLF 162 (317)
T ss_pred CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC-EEcCCCCHHHEEEccCCCCCCcEEEeeccceecc
Confidence 5787776421 1235788999999999999999999999 9999999999999 56678999999998764
Q ss_pred CCC-------CccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhh----------------
Q 011184 207 RDG-------KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD---------------- 262 (491)
Q Consensus 207 ~~~-------~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~---------------- 262 (491)
... ....+|+.|+|||++.+. .++.++|||||||++|||+||+.||..........
T Consensus 163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T cd07867 163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMG 242 (317)
T ss_pred CCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcC
Confidence 322 234578899999998764 47899999999999999999998875321110000
Q ss_pred ----cc------c---cccccccc------------cCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 263 ----RN------L---QMLTDSCL------------EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 263 ----~~------~---~~~~~~~~------------~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.. . ........ ........+..+.+|+.+||+.||.+|||+.++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~ 313 (317)
T cd07867 243 FPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQ 313 (317)
T ss_pred CCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhc
Confidence 00 0 00000000 00001122356889999999999999999999986
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=294.03 Aligned_cols=243 Identities=20% Similarity=0.296 Sum_probs=197.8
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
|.+...||.|++|.||++.. .+++.|++|.++..... ..+.+..|+++++.++|+||+++++++...+..++|+||+
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYC 81 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecC
Confidence 45567789999999999995 46899999999765443 4567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-----
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----- 210 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----- 210 (491)
++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++.......
T Consensus 82 ~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~-i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~ 158 (264)
T cd06626 82 SGGTLEELLEH--GRILDEHVIRVYTLQLLEGLAYLHSHG-IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGE 158 (264)
T ss_pred CCCcHHHHHhh--cCCCChHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccc
Confidence 99999999863 345888999999999999999999999 9999999999999999999999999987653321
Q ss_pred ---ccccCCCCCCcccccCCC---CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCc--hhH
Q 011184 211 ---SYSTNLAFTPPEYLRTGR---VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD--DDG 282 (491)
Q Consensus 211 ---~~~~t~~y~aPE~~~~~~---~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 282 (491)
...++..|+|||++.+.. .+.++||||||++++++++|+.||............... .....++. ..+
T Consensus 159 ~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 234 (264)
T cd06626 159 EVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA----GHKPPIPDSLQLS 234 (264)
T ss_pred cccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc----CCCCCCCcccccC
Confidence 234678999999998766 889999999999999999999887543111100000000 11112222 236
Q ss_pred HHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 283 TELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 283 ~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
..+.+++.+||+.+|.+|||+.+++.
T Consensus 235 ~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 235 PEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHhc
Confidence 78999999999999999999999876
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=298.27 Aligned_cols=244 Identities=19% Similarity=0.266 Sum_probs=199.4
Q ss_pred ccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCC
Q 011184 59 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 137 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~ 137 (491)
+++...+|.|++|.||++... ++..|++|++..... ....+.+|+++++.++|+||+++++++...+..++|+||+++
T Consensus 21 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 99 (286)
T cd06614 21 YKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDG 99 (286)
T ss_pred chHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCC
Confidence 455567799999999999965 688999999976543 466788999999999999999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----Cccc
Q 011184 138 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYS 213 (491)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~ 213 (491)
++|.+++.... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....
T Consensus 100 ~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~g-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 177 (286)
T cd06614 100 GSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQN-VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVV 177 (286)
T ss_pred CcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhcccc
Confidence 99999997522 37999999999999999999999998 999999999999999999999999987654322 2334
Q ss_pred cCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhc
Q 011184 214 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 293 (491)
Q Consensus 214 ~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 293 (491)
++..|++||.+.+..++.++|+||||+++|+|++|..|+............... .......+..++..+.+++.+||
T Consensus 178 ~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~li~~~l 254 (286)
T cd06614 178 GTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTK---GIPPLKNPEKWSPEFKDFLNKCL 254 (286)
T ss_pred CCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc---CCCCCcchhhCCHHHHHHHHHHh
Confidence 678899999998888999999999999999999999887543221111110000 00111112235678999999999
Q ss_pred cCCCCCCCChhHHHH
Q 011184 294 QYEPRERPNPKSLVT 308 (491)
Q Consensus 294 ~~dp~~Rps~~~il~ 308 (491)
+.+|..|||+.+++.
T Consensus 255 ~~~p~~Rpt~~~il~ 269 (286)
T cd06614 255 VKDPEKRPSAEELLQ 269 (286)
T ss_pred ccChhhCcCHHHHhh
Confidence 999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=295.21 Aligned_cols=248 Identities=17% Similarity=0.276 Sum_probs=197.6
Q ss_pred ccccccCCCCCccEEEEEEECC--CCEEEEEEeCCCCC----------CChhHHHHHHHHHhc-cCCCCcceEEeEeecC
Q 011184 59 ENIVSEHGEKAPNVVYKGKLEN--QRRIAVKRFNRMAW----------PDPRQFLEEARSVGQ-LRNNRLTNLLGCCCEG 125 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~-l~H~niv~~~~~~~~~ 125 (491)
+.++..||.|+||.||++.... ++.+|+|.+..... .....+.+|+.++.+ ++||||+++++++..+
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 81 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN 81 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence 3456677999999999999644 78899998853221 123457788888875 6999999999999999
Q ss_pred CeeEEEEecCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccccceeeCCCCCeEEccCCC
Q 011184 126 DERLLVAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGL 202 (491)
Q Consensus 126 ~~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 202 (491)
+..++||||++|++|.+++... ....+++..++.++.|++.||.|||+ .+ ++|+||+|+||+++.++.++|+|||+
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~-i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 82 DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR-IVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc-eeecCCCHHHEEECCCCcEEEecccc
Confidence 9999999999999999887431 23568999999999999999999996 66 99999999999999999999999999
Q ss_pred cccCCCC---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCc
Q 011184 203 MKNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 279 (491)
Q Consensus 203 a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (491)
+...... ....++..|++||.+.+..++.++||||||+++|+|++|..|+..................+ ....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~ 236 (269)
T cd08528 161 AKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEP----LPEG 236 (269)
T ss_pred eeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCc----CCcc
Confidence 8765433 23457889999999998889999999999999999999998875443222221111111111 1112
Q ss_pred hhHHHHHHHHHHhccCCCCCCCChhHHHHHhc
Q 011184 280 DDGTELVRLASRCLQYEPRERPNPKSLVTALS 311 (491)
Q Consensus 280 ~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~ 311 (491)
..+..+.+++.+||+.||++||++.++.++++
T Consensus 237 ~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 237 MYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred cCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 34578999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=296.81 Aligned_cols=242 Identities=18% Similarity=0.267 Sum_probs=199.3
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
+.++..||.|+||.||+|.. .++..||||.+..... .....+.+|+.++.+++||||+++++++..++..++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 45667789999999999985 4688999999864332 224578899999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----Ccc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSY 212 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 212 (491)
+++|.+++. ...+++..+..++.|++.+|.+||+.+ ++|+||+|+||+++.++.++|+|||++...... ...
T Consensus 86 ~~~l~~~i~---~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (277)
T cd06641 86 GGSALDLLE---PGPLDETQIATILREILKGLDYLHSEK-KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF 161 (277)
T ss_pred CCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHccCC-eecCCCCHHhEEECCCCCEEEeecccceecccchhhhccc
Confidence 999999884 456899999999999999999999998 999999999999999999999999998654332 223
Q ss_pred ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 011184 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 292 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 292 (491)
.++..|+|||.+.+..++.++|+|||||++++|++|..|+............ ........+...+.++.+++.+|
T Consensus 162 ~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~ 236 (277)
T cd06641 162 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLI-----PKNNPPTLEGNYSKPLKEFVEAC 236 (277)
T ss_pred cCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHH-----hcCCCCCCCcccCHHHHHHHHHH
Confidence 5678899999998888899999999999999999999887543222111111 01111223445667899999999
Q ss_pred ccCCCCCCCChhHHHHH
Q 011184 293 LQYEPRERPNPKSLVTA 309 (491)
Q Consensus 293 l~~dp~~Rps~~~il~~ 309 (491)
|+.+|.+||++.+++..
T Consensus 237 l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 237 LNKEPSFRPTAKELLKH 253 (277)
T ss_pred ccCChhhCcCHHHHHhC
Confidence 99999999999999983
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-38 Score=295.05 Aligned_cols=242 Identities=18% Similarity=0.188 Sum_probs=192.3
Q ss_pred ccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCC---hhHHHHHHHHH-hccCCCCcceEEeEeecCCeeEEEEecCCC
Q 011184 63 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSV-GQLRNNRLTNLLGCCCEGDERLLVAEYMPN 137 (491)
Q Consensus 63 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l-~~l~H~niv~~~~~~~~~~~~~lv~e~~~~ 137 (491)
+.+|.|++|.||+|.. .+++.||||.+....... ...+..|..++ ...+|+||+++++++..++..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 4579999999999995 468999999986543211 22344555444 445899999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCCccccCCC
Q 011184 138 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 217 (491)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t~~ 217 (491)
++|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++..........++..
T Consensus 82 ~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 158 (260)
T cd05611 82 GDCASLIKT--LGGLPEDWAKQYIAEVVLGVEDLHQRG-IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPD 158 (260)
T ss_pred CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcC
Confidence 999999863 356899999999999999999999998 99999999999999999999999999887655556678899
Q ss_pred CCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCCC
Q 011184 218 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 297 (491)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp 297 (491)
|++||.+.+..++.++||||||+++|+|++|..|+................. .........++..+.+++.+||+.+|
T Consensus 159 y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p 236 (260)
T cd05611 159 YLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRI--NWPEEVKEFCSPEAVDLINRLLCMDP 236 (260)
T ss_pred ccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhccc--CCCCcccccCCHHHHHHHHHHccCCH
Confidence 9999999888889999999999999999999998865433322111111111 01112233466889999999999999
Q ss_pred CCCCChhHHHHH
Q 011184 298 RERPNPKSLVTA 309 (491)
Q Consensus 298 ~~Rps~~~il~~ 309 (491)
++||++.++.+.
T Consensus 237 ~~R~~~~~~~~~ 248 (260)
T cd05611 237 AKRLGANGYQEI 248 (260)
T ss_pred HHccCCCcHHHH
Confidence 999977655443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=301.43 Aligned_cols=248 Identities=18% Similarity=0.242 Sum_probs=199.6
Q ss_pred cccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC---ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 60 NIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
..+..||+|+||.||+++. .++..||+|++...... ....+.+|+++++.++|||++++++++..++..++||||+
T Consensus 28 ~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 107 (317)
T cd06635 28 TDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYC 107 (317)
T ss_pred hhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCC
Confidence 4556779999999999994 46889999998644322 2346889999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCCccccC
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN 215 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t 215 (491)
+ |+|.+.+.. ...++++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++..........++
T Consensus 108 ~-g~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~-i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 184 (317)
T cd06635 108 L-GSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-MIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGT 184 (317)
T ss_pred C-CCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcccEEECCCCCEEEecCCCccccCCcccccCC
Confidence 7 577777653 3456899999999999999999999998 999999999999999999999999998876666666788
Q ss_pred CCCCCccccc---CCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 011184 216 LAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 292 (491)
Q Consensus 216 ~~y~aPE~~~---~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 292 (491)
..|+|||.+. .+.++.++|||||||++|+|++|..|+.............. ...........+..+.+++.+|
T Consensus 185 ~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~li~~~ 260 (317)
T cd06635 185 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ----NESPTLQSNEWSDYFRNFVDSC 260 (317)
T ss_pred ccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHh----ccCCCCCCccccHHHHHHHHHH
Confidence 9999999974 35688999999999999999999988754322111111111 0111111234567899999999
Q ss_pred ccCCCCCCCChhHHHHHhcccc
Q 011184 293 LQYEPRERPNPKSLVTALSPLQ 314 (491)
Q Consensus 293 l~~dp~~Rps~~~il~~L~~~~ 314 (491)
|+.+|.+||++.+++..+..+.
T Consensus 261 l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 261 LQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred ccCCcccCcCHHHHHhChhhhc
Confidence 9999999999999998655543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-38 Score=301.69 Aligned_cols=246 Identities=19% Similarity=0.254 Sum_probs=192.6
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccC-CCCcceEEeEeecCCeeEEEEecC
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
+..++.||+|+||.||++.. .+++.||+|.+...... ....+.+|+.++.++. ||||+++++++..++..+++|||+
T Consensus 6 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~ 85 (288)
T cd06616 6 LKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELM 85 (288)
T ss_pred hHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecc
Confidence 34456789999999999994 45899999998754322 3456889999999996 999999999999999999999998
Q ss_pred CCCCHHHHh---cccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccccceeeCCCCCeEEccCCCcccCCCC--
Q 011184 136 PNETLAKHL---FHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 136 ~~gsL~~~l---~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 209 (491)
. ++|.++. .......+++..+..++.|++.||+|||+. + ++||||||+||+++.++.++|+|||++......
T Consensus 86 ~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 163 (288)
T cd06616 86 D-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK-IIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIA 163 (288)
T ss_pred c-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC-eeccCCCHHHEEEccCCcEEEeecchhHHhccCCc
Confidence 6 5665533 222346789999999999999999999975 7 999999999999999999999999998654322
Q ss_pred -CccccCCCCCCcccccCC---CCCCCccchhHHHHHHHHHhCCCCCCCchh--hHhhhccccccccccccCCCCchhHH
Q 011184 210 -KSYSTNLAFTPPEYLRTG---RVTPESVIYSFGTLLLDLLSGKHIPPSHAL--DLIRDRNLQMLTDSCLEGQFTDDDGT 283 (491)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~---~~~~~~Dv~slG~vl~elltg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (491)
....++..|+|||.+.+. .++.++||||||+++|+|++|+.||..... ...... .. ...+......+...+.
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~ 241 (288)
T cd06616 164 KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQV-VK-GDPPILSNSEEREFSP 241 (288)
T ss_pred cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhh-cC-CCCCcCCCcCCCccCH
Confidence 234578899999999876 588999999999999999999988754321 111110 00 0111111222234678
Q ss_pred HHHHHHHHhccCCCCCCCChhHHHH
Q 011184 284 ELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 284 ~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
++.+|+.+||+.+|++|||+.+|+.
T Consensus 242 ~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 242 SFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhc
Confidence 8999999999999999999999987
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-38 Score=299.59 Aligned_cols=249 Identities=20% Similarity=0.292 Sum_probs=193.2
Q ss_pred ccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
..+++++.||.|++|.||+|... +++.||||.+...... ....+.+|+++++.++||||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 45677888899999999999954 6899999998654322 234577899999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----C
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 210 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 210 (491)
++ ++|.+++... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... .
T Consensus 85 ~~-~~L~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 161 (291)
T cd07844 85 LD-TDLKQYMDDC-GGGLSMHNVRLFLFQLLRGLAYCHQRR-VLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYS 161 (291)
T ss_pred CC-CCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccCCHHHEEEcCCCCEEECccccccccCCCCcccc
Confidence 98 5999988642 346889999999999999999999998 999999999999999999999999998653221 2
Q ss_pred ccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchh--hHhhh--c--------cccccc--------
Q 011184 211 SYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHAL--DLIRD--R--------NLQMLT-------- 269 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~--~~~~~--~--------~~~~~~-------- 269 (491)
...++..|+|||++.+ ..++.++||||||+++|+|++|..|+..... ..... . ......
T Consensus 162 ~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (291)
T cd07844 162 NEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPY 241 (291)
T ss_pred ccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccc
Confidence 2245788999999875 4578899999999999999999988754321 00000 0 000000
Q ss_pred -----cccccCCCCchhH--HHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 270 -----DSCLEGQFTDDDG--TELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 270 -----~~~~~~~~~~~~~--~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
............. .++.+++.+||+.+|.+|||+.+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 242 SFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred cccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0000000001122 67889999999999999999999886
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=298.45 Aligned_cols=246 Identities=21% Similarity=0.299 Sum_probs=199.1
Q ss_pred ccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 59 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
+++++.||.|++|.||++... +++.|++|.+..... .....+.+|++++++++||||+++++.+...+..++|+||++
T Consensus 3 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (265)
T cd06605 3 LEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMD 82 (265)
T ss_pred chHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecC
Confidence 455677899999999999964 589999999876542 234578899999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccccceeeCCCCCeEEccCCCcccCCCC--Cccc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYS 213 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~~~ 213 (491)
+++|.+++... ...+++..+..++.|++.||.|||+ .+ ++|+||||+||+++.++.++|+|||.+...... ....
T Consensus 83 ~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~-i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 160 (265)
T cd06605 83 GGSLDKILKEV-QGRIPERILGKIAVAVLKGLTYLHEKHK-IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFV 160 (265)
T ss_pred CCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHcCCCC-eecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhccc
Confidence 99999998642 2678999999999999999999999 88 999999999999999999999999988654321 2256
Q ss_pred cCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchh--hHhhhccccccccccccCCCCch-hHHHHHHHHH
Q 011184 214 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL--DLIRDRNLQMLTDSCLEGQFTDD-DGTELVRLAS 290 (491)
Q Consensus 214 ~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~ 290 (491)
++..|+|||.+.+..++.++||||||+++++|++|..|+..... .... .......... ....+.. .+.++.++|.
T Consensus 161 ~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~li~ 238 (265)
T cd06605 161 GTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIF-ELLQYIVNEP-PPRLPSGKFSPDFQDFVN 238 (265)
T ss_pred CChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHH-HHHHHHhcCC-CCCCChhhcCHHHHHHHH
Confidence 78899999999988899999999999999999999988754310 0000 0000111111 1112222 6678999999
Q ss_pred HhccCCCCCCCChhHHHH
Q 011184 291 RCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~ 308 (491)
+||..||++|||+.+++.
T Consensus 239 ~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 239 LCLIKDPRERPSYKELLE 256 (265)
T ss_pred HHcCCCchhCcCHHHHhh
Confidence 999999999999999986
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-38 Score=301.90 Aligned_cols=247 Identities=19% Similarity=0.279 Sum_probs=195.1
Q ss_pred ccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 59 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
++++..||.|++|.||++... +++.||+|++...... ..+.+.+|+++++.++||||+++++++..++..++||||+
T Consensus 3 y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 82 (286)
T cd07846 3 YENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFV 82 (286)
T ss_pred eeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecC
Confidence 566788899999999999964 5899999998653322 2456889999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----Cc
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 211 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 211 (491)
++++|.++... ...+++..+..++.||+.||.|||+.+ ++|+||+|+||++++++.++|+|||++...... ..
T Consensus 83 ~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (286)
T cd07846 83 DHTVLDDLEKY--PNGLDESRVRKYLFQILRGIEFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTD 159 (286)
T ss_pred CccHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCc
Confidence 99999887652 345899999999999999999999998 999999999999999999999999998754332 22
Q ss_pred cccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccc----------------c----cccc
Q 011184 212 YSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL----------------Q----MLTD 270 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~----------------~----~~~~ 270 (491)
..++..|+|||++.+. .++.++||||||+++++|++|++|+............. . ....
T Consensus 160 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (286)
T cd07846 160 YVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRL 239 (286)
T ss_pred ccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhcccc
Confidence 3467889999998753 47889999999999999999998775432111000000 0 0000
Q ss_pred cc-----ccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 271 SC-----LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 271 ~~-----~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
+. ......+.++..+.+++.+||..+|.+||++.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 240 PEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred ccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 00 000112345678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-38 Score=295.32 Aligned_cols=245 Identities=19% Similarity=0.257 Sum_probs=200.8
Q ss_pred ccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeec--CCeeEEEEe
Q 011184 59 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCE--GDERLLVAE 133 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~--~~~~~lv~e 133 (491)
|+++..+|.|++|.||++. ..++..||+|.+...... ..+.+..|+++++.++||||+++++++.. +...+++||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e 81 (265)
T cd08217 2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVME 81 (265)
T ss_pred ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEeh
Confidence 5667888999999999999 456889999998754332 24568889999999999999999998754 456899999
Q ss_pred cCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHH-----hCCCcccccccccceeeCCCCCeEEccCCCcccC
Q 011184 134 YMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCT-----SKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 206 (491)
Q Consensus 134 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH-----~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 206 (491)
|+++++|.+++... ...++++..++.++.||+.||.||| +.+ ++|+||+|+||+++.++.+||+|||++...
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~-i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 82 YCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT-VLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc-ceecCCCHHHEEEecCCCEEEecccccccc
Confidence 99999999998642 2357899999999999999999999 887 999999999999999999999999998865
Q ss_pred CCCC----ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhH
Q 011184 207 RDGK----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 282 (491)
Q Consensus 207 ~~~~----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (491)
.... ...++..|+|||.+.+..++.++|+||||+++++|++|..|+.............. .....++...+
T Consensus 161 ~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 235 (265)
T cd08217 161 GHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKE-----GKFRRIPYRYS 235 (265)
T ss_pred cCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhc-----CCCCCCccccC
Confidence 4432 34678899999999988899999999999999999999988765432222211111 11223445667
Q ss_pred HHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 283 TELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 283 ~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
..+.+++.+||+.+|.+||++.+|++.
T Consensus 236 ~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 236 SELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 899999999999999999999999873
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-38 Score=297.33 Aligned_cols=244 Identities=19% Similarity=0.305 Sum_probs=196.7
Q ss_pred ccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCC------ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 61 IVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP------DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
....+|.|++|.||++. ..+++.||+|++...... ....+.+|+.++++++|+||+++++++..++..++|||
T Consensus 4 ~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e 83 (268)
T cd06630 4 KGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVE 83 (268)
T ss_pred ccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEe
Confidence 34556999999999999 467899999998643321 13568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC-CeEEccCCCcccCCCC---
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDG--- 209 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~~--- 209 (491)
|+++++|.+++.. ..++++..+..++.||+.||.|||+++ ++|+||+|+||+++.++ .++|+|||++......
T Consensus 84 ~~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~al~~LH~~~-i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 160 (268)
T cd06630 84 WMAGGSVSHLLSK--YGAFKEAVIINYTEQLLRGLSYLHENQ-IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTG 160 (268)
T ss_pred ccCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEccccccccccccccc
Confidence 9999999999863 457899999999999999999999998 99999999999998776 5999999998654321
Q ss_pred -----CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHH
Q 011184 210 -----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 284 (491)
Q Consensus 210 -----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (491)
....++..|+|||.+.+..++.++||||+|+++++|++|..|+.......... ..............+...+++
T Consensus 161 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 239 (268)
T cd06630 161 AGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLA-LIFKIASATTAPSIPEHLSPG 239 (268)
T ss_pred CCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHH-HHHHHhccCCCCCCchhhCHH
Confidence 12356789999999988889999999999999999999998875332111000 001111111123345567789
Q ss_pred HHHHHHHhccCCCCCCCChhHHHH
Q 011184 285 LVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 285 ~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
+.+++.+||..+|.+||++.+++.
T Consensus 240 ~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 240 LRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred HHHHHHHHcCCCcccCcCHHHHhc
Confidence 999999999999999999999986
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=297.28 Aligned_cols=241 Identities=22% Similarity=0.273 Sum_probs=201.0
Q ss_pred ccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCC---CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 59 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
+++++.+|.|+||.||++... ++..||+|.+..... ...+.+.+|++++++++||||+++++++..++..++|+||
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (258)
T cd05578 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDL 81 (258)
T ss_pred ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeC
Confidence 456677899999999999954 589999999975432 2356789999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC---Cc
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KS 211 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~ 211 (491)
+.|++|.+++.. ..++++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++...... ..
T Consensus 82 ~~~~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~ 158 (258)
T cd05578 82 LLGGDLRYHLSQ--KVKFSEEQVKFWICEIVLALEYLHSKG-IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTS 158 (258)
T ss_pred CCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeEEcCCCCEEEeecccccccCCCccccc
Confidence 999999999963 357899999999999999999999998 999999999999999999999999988765433 23
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchh---hHhhhccccccccccccCCCCchhHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL---DLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 288 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (491)
..++..|+|||.+.+..++.++|+||||+++|+|++|..|+..... ...... ... .....+...+..+.++
T Consensus 159 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~ 232 (258)
T cd05578 159 TSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAK----QET--ADVLYPATWSTEAIDA 232 (258)
T ss_pred cCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHH----hcc--ccccCcccCcHHHHHH
Confidence 4577889999999888899999999999999999999988765432 111111 110 1223455567899999
Q ss_pred HHHhccCCCCCCCCh--hHHHH
Q 011184 289 ASRCLQYEPRERPNP--KSLVT 308 (491)
Q Consensus 289 i~~cl~~dp~~Rps~--~~il~ 308 (491)
+.+||+.||.+||++ +++++
T Consensus 233 i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 233 INKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred HHHHccCChhHcCCccHHHHhc
Confidence 999999999999999 66654
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-38 Score=297.07 Aligned_cols=241 Identities=17% Similarity=0.247 Sum_probs=193.5
Q ss_pred CCCCCccEEEEEE-ECCCCEEEEEEeCCCCC---CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCCH
Q 011184 65 HGEKAPNVVYKGK-LENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL 140 (491)
Q Consensus 65 lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gsL 140 (491)
||.|+||+||++. ..+|+.||+|.+..... .....+..|+++++.++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 5899999999998 44689999999864321 2244677899999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC---CccccCCC
Q 011184 141 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLA 217 (491)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~~t~~ 217 (491)
.+++.......+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++...... ....++..
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 159 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR-IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPG 159 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCC
Confidence 99987544447899999999999999999999999 999999999999999999999999988754322 23356788
Q ss_pred CCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCCC
Q 011184 218 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 297 (491)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp 297 (491)
|+|||.+.+..++.++||||||+++++|++|+.|+.................. .....+...++.+.+++.+||+.||
T Consensus 160 y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p 237 (277)
T cd05577 160 YMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE--MAVEYPDKFSPEAKDLCEALLQKDP 237 (277)
T ss_pred cCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc--ccccCCccCCHHHHHHHHHHccCCh
Confidence 99999998888999999999999999999999887543221000000011110 1122344567899999999999999
Q ss_pred CCCC-----ChhHHHH
Q 011184 298 RERP-----NPKSLVT 308 (491)
Q Consensus 298 ~~Rp-----s~~~il~ 308 (491)
.+|| ++.+++.
T Consensus 238 ~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 238 EKRLGCRGGSADEVRE 253 (277)
T ss_pred hHccCCCcccHHHHHh
Confidence 9999 5555664
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-38 Score=299.93 Aligned_cols=250 Identities=18% Similarity=0.245 Sum_probs=196.1
Q ss_pred CccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecC--CeeEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLL 130 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~--~~~~l 130 (491)
+..++++..||.|++|.||+|... +++.+++|.++...... ...+.+|+.++.+++||||+++++++... +..++
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence 345667788899999999999964 58899999997543222 34577899999999999999999998877 88999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 209 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 209 (491)
||||++ ++|.+++... ...+++..+..++.||+.||.|||+++ ++|+||||+||+++.++.++|+|||++......
T Consensus 84 v~e~~~-~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~-i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 160 (293)
T cd07843 84 VMEYVE-HDLKSLMETM-KQPFLQSEVKCLMLQLLSGVAHLHDNW-ILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL 160 (293)
T ss_pred EehhcC-cCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence 999997 5999888642 346899999999999999999999999 999999999999999999999999998765443
Q ss_pred ---CccccCCCCCCcccccCCC-CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcc---------------------
Q 011184 210 ---KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN--------------------- 264 (491)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~--------------------- 264 (491)
....+++.|+|||.+.+.. ++.++|+||||+++++|++|..|+............
T Consensus 161 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (293)
T cd07843 161 KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGA 240 (293)
T ss_pred cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchh
Confidence 2234678899999987644 688999999999999999999887543211110000
Q ss_pred ----ccccccccccCCCCch-hHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 265 ----LQMLTDSCLEGQFTDD-DGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 265 ----~~~~~~~~~~~~~~~~-~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
............++.. +++.+.+++.+||+.+|++|||+.+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 241 KKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred cccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 0000000111222322 4678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=295.12 Aligned_cols=241 Identities=21% Similarity=0.287 Sum_probs=196.7
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC-CCChhHHHHHHHHHhccC---CCCcceEEeEeecCCeeEEEEe
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLR---NNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~---H~niv~~~~~~~~~~~~~lv~e 133 (491)
|+++..+|.|+||.||+|.. .+++.||+|.+.... ......+.+|+.+++.++ |||++++++++..+...++|||
T Consensus 3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e 82 (277)
T cd06917 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME 82 (277)
T ss_pred hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence 45567789999999999995 568999999986543 234567889999999996 9999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 209 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 209 (491)
|++|++|.+++. ...+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~~~---~~~l~~~~~~~i~~~i~~~l~~lh~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06917 83 YAEGGSVRTLMK---AGPIAEKYISVIIREVLVALKYIHKVG-VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKR 158 (277)
T ss_pred cCCCCcHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcCHHHEEEcCCCCEEEccCCceeecCCCcccc
Confidence 999999999985 347899999999999999999999999 999999999999999999999999998765432
Q ss_pred CccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCc-hhHHHHHH
Q 011184 210 KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD-DDGTELVR 287 (491)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 287 (491)
....++..|+|||.+.++ .++.++|+||||+++|+|++|..|+............... ....++. ..+.++.+
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 233 (277)
T cd06917 159 STFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS-----KPPRLEDNGYSKLLRE 233 (277)
T ss_pred ccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccC-----CCCCCCcccCCHHHHH
Confidence 234578889999998754 4688999999999999999999887544322111110000 1111222 25678999
Q ss_pred HHHHhccCCCCCCCChhHHHH
Q 011184 288 LASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~ 308 (491)
++.+||+.||++||++.+++.
T Consensus 234 ~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 234 FVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred HHHHHcCCCcccCcCHHHHhh
Confidence 999999999999999999987
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-38 Score=299.96 Aligned_cols=247 Identities=20% Similarity=0.270 Sum_probs=195.1
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
++++..||.|++|.||+|+. .++..||||.+...... ....+.+|++++++++||||+++++++..++..++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (284)
T cd07860 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 81 (284)
T ss_pred ceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeecc
Confidence 45667789999999999995 46899999998643322 2357889999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----Cc
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 211 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 211 (491)
. ++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 82 ~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~-i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (284)
T cd07860 82 H-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 159 (284)
T ss_pred c-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEeeccchhhcccCcccccc
Confidence 6 68999886544567899999999999999999999998 999999999999999999999999998754322 22
Q ss_pred cccCCCCCCcccccCCC-CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccc-----------------------
Q 011184 212 YSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM----------------------- 267 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~----------------------- 267 (491)
..++..|+|||.+.+.. ++.++||||||+++|+|+||+.|+...............
T Consensus 160 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd07860 160 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFP 239 (284)
T ss_pred ccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcc
Confidence 34578899999887654 688999999999999999999888654321110000000
Q ss_pred -cccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 268 -LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 268 -~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
..... ........+.++.++|.+||+.||.+|||+++++.
T Consensus 240 ~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 240 KWARQD-FSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred cccccC-HHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 00000 00011234578899999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=299.06 Aligned_cols=257 Identities=16% Similarity=0.170 Sum_probs=198.7
Q ss_pred cCHHHHHHHhcCCccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhcc-CCCCcceEEeE
Q 011184 44 FTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGC 121 (491)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~ 121 (491)
++.+++...+++| .++..+|.|+||.||++.. .+++.+|+|++.... .....+.+|+.++.++ +||||++++++
T Consensus 12 ~~~~~~~~~~~~y---~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~ 87 (291)
T cd06639 12 LGLESLGDPTDTW---EIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGM 87 (291)
T ss_pred hhcccCCCCCCCe---EEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEE
Confidence 4445555555555 4556669999999999995 568899999986532 2345678899999999 89999999999
Q ss_pred eecC-----CeeEEEEecCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCC
Q 011184 122 CCEG-----DERLLVAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 194 (491)
Q Consensus 122 ~~~~-----~~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~ 194 (491)
+... +..++||||+++++|.+++... ....+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.
T Consensus 88 ~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~nili~~~~~ 166 (291)
T cd06639 88 FYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR-IIHRDVKGNNILLTTEGG 166 (291)
T ss_pred EEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEEcCCCC
Confidence 8753 3589999999999999987531 2456899999999999999999999998 999999999999999999
Q ss_pred eEEccCCCcccCCCC----CccccCCCCCCcccccCC-----CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccc
Q 011184 195 PRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG-----RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL 265 (491)
Q Consensus 195 ~kl~Dfgla~~~~~~----~~~~~t~~y~aPE~~~~~-----~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~ 265 (491)
++|+|||++...... ....++..|+|||.+... .++.++|||||||++|+|++|+.|+.............
T Consensus 167 ~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~ 246 (291)
T cd06639 167 VKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIP 246 (291)
T ss_pred EEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHh
Confidence 999999998754322 234578889999988643 26889999999999999999998875432211110000
Q ss_pred cccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 266 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.. .......+...+..+.+++.+||+.+|++||++.++++
T Consensus 247 ~~---~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 247 RN---PPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred cC---CCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 00 00011123345568999999999999999999999987
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=297.90 Aligned_cols=239 Identities=19% Similarity=0.262 Sum_probs=196.0
Q ss_pred ccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCCHH
Q 011184 63 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLA 141 (491)
Q Consensus 63 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 141 (491)
..||+|+||.||++.. .++..||||++..........+.+|+.+++.++|+||+++++++..++..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 4579999999999995 568999999986544334567889999999999999999999999999999999999999999
Q ss_pred HHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----CccccCCC
Q 011184 142 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLA 217 (491)
Q Consensus 142 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~t~~ 217 (491)
+++. ...+++..+..++.|++.+|.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++..
T Consensus 106 ~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~g-ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 181 (292)
T cd06657 106 DIVT---HTRMNEEQIAAVCLAVLKALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPY 181 (292)
T ss_pred HHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCcc
Confidence 9874 356899999999999999999999998 999999999999999999999999987654322 23457889
Q ss_pred CCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCCC
Q 011184 218 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 297 (491)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp 297 (491)
|++||.+.+..++.++|+||||+++|+|++|..|+................... .......+..+.+++.+||+.+|
T Consensus 182 y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~~P 258 (292)
T cd06657 182 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPK---LKNLHKVSPSLKGFLDRLLVRDP 258 (292)
T ss_pred ccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcc---cCCcccCCHHHHHHHHHHHhCCc
Confidence 999999988889999999999999999999998876543221111111111110 01123456789999999999999
Q ss_pred CCCCChhHHHH
Q 011184 298 RERPNPKSLVT 308 (491)
Q Consensus 298 ~~Rps~~~il~ 308 (491)
.+||++.+++.
T Consensus 259 ~~R~~~~~ll~ 269 (292)
T cd06657 259 AQRATAAELLK 269 (292)
T ss_pred ccCcCHHHHhc
Confidence 99999999988
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=295.94 Aligned_cols=249 Identities=17% Similarity=0.222 Sum_probs=196.5
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecC--CeeEEEEec
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLLVAEY 134 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--~~~~lv~e~ 134 (491)
++.+.++|.|++|.||++.. .+++.+|+|.+..... .....+.+|++++++++||||++++++|... +.+++||||
T Consensus 3 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 82 (287)
T cd06621 3 IVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEY 82 (287)
T ss_pred eEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEe
Confidence 45567789999999999995 4588999999875432 2345789999999999999999999998653 468999999
Q ss_pred CCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC--C
Q 011184 135 MPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--K 210 (491)
Q Consensus 135 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~ 210 (491)
+++++|.+++... ....+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... .
T Consensus 83 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 161 (287)
T cd06621 83 CEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK-IIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAG 161 (287)
T ss_pred cCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEecCCeEEEeeccccccccccccc
Confidence 9999999876532 2356889999999999999999999999 999999999999999999999999998754332 2
Q ss_pred ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchh-----hHhhhccccccccccccCCCC--chhHH
Q 011184 211 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-----DLIRDRNLQMLTDSCLEGQFT--DDDGT 283 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~~ 283 (491)
...++..|++||.+.+..++.++||||||+++|+|++|..|+..... ........ ....+....... ...++
T Consensus 162 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 240 (287)
T cd06621 162 TFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIV-NMPNPELKDEPGNGIKWSE 240 (287)
T ss_pred cccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHh-cCCchhhccCCCCCCchHH
Confidence 34567889999999988899999999999999999999988764411 01111000 000111111111 23467
Q ss_pred HHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 284 ELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 284 ~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
.+.+++.+||+.+|.+|||+.++++.
T Consensus 241 ~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 241 EFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 89999999999999999999999983
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=298.84 Aligned_cols=253 Identities=21% Similarity=0.221 Sum_probs=196.6
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC-----ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-----DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
++++..||.|++|.||+|.. .+++.||||.+...... ....+..|+++++.++|+||+++++++...+..++||
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF 81 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence 44566789999999999995 46899999999765432 2345678999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC---
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 209 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 209 (491)
||+ +++|.+++.... ..+++..+..++.||+.||.|||+++ ++|+||+|+||+++.++.++|+|||++......
T Consensus 82 e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~ 158 (298)
T cd07841 82 EFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNW-ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRK 158 (298)
T ss_pred ccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCChhhEEEcCCCCEEEccceeeeeccCCCcc
Confidence 999 899999996422 36899999999999999999999999 999999999999999999999999998765432
Q ss_pred -CccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccc--------------cccc--
Q 011184 210 -KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM--------------LTDS-- 271 (491)
Q Consensus 210 -~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~--------------~~~~-- 271 (491)
....+++.|+|||.+.+ ..++.++|||||||++++|++|.+++............... ....
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (298)
T cd07841 159 MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVE 238 (298)
T ss_pred ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccccccc
Confidence 12245678999998865 35788999999999999999997666543211100000000 0000
Q ss_pred ------cccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 272 ------CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 272 ------~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
..........+..+.+++.+||+.||++|||+.+++. ..+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~--~~~~~~ 287 (298)
T cd07841 239 FKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE--HPYFSN 287 (298)
T ss_pred ccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh--CccccC
Confidence 0001112345678999999999999999999999998 444443
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=293.79 Aligned_cols=248 Identities=20% Similarity=0.303 Sum_probs=193.9
Q ss_pred cccccCCCCCccEEEEEEEC----CCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecCC------e
Q 011184 60 NIVSEHGEKAPNVVYKGKLE----NQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGD------E 127 (491)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~------~ 127 (491)
.+.+.||+|+||.||+|.+. ++..||||++...... ..+++.+|+++++.++||||+++++++.... .
T Consensus 2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 81 (273)
T cd05074 2 TLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPI 81 (273)
T ss_pred cchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccc
Confidence 34567799999999999843 3688999998754322 2456889999999999999999999886542 2
Q ss_pred eEEEEecCCCCCHHHHhccc----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCc
Q 011184 128 RLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLM 203 (491)
Q Consensus 128 ~~lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 203 (491)
.+++++|+++|+|.+++... ....+++.....++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~nili~~~~~~kl~dfg~~ 160 (273)
T cd05074 82 PMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN-FIHRDLAARNCMLNENMTVCVADFGLS 160 (273)
T ss_pred eEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccchhhEEEcCCCCEEECccccc
Confidence 47889999999999887421 1235788999999999999999999998 999999999999999999999999998
Q ss_pred ccCCCCC------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCC
Q 011184 204 KNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQ 276 (491)
Q Consensus 204 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (491)
+...... ...+++.|++||.+.+..++.++||||||+++|+|++ |..|+............... ....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~ 235 (273)
T cd05074 161 KKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKG-----NRLK 235 (273)
T ss_pred ccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcC-----CcCC
Confidence 7653221 2234567999999988889999999999999999999 77666543322211111110 0111
Q ss_pred CCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccc
Q 011184 277 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 277 ~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~ 313 (491)
.+...+..+.+++.+||+.+|++|||+.+++..|+.+
T Consensus 236 ~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 236 QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 2234567899999999999999999999999999765
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=293.40 Aligned_cols=237 Identities=19% Similarity=0.225 Sum_probs=196.0
Q ss_pred CCCCCccEEEEEEEC-CCCEEEEEEeCCCCCC---ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCCH
Q 011184 65 HGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL 140 (491)
Q Consensus 65 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gsL 140 (491)
||.|++|.||+++.. +++.||+|++...... ..+.+.+|+.+++.++||||+++++.+..++..++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 589999999999954 5899999998654322 345789999999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC---CccccCCC
Q 011184 141 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLA 217 (491)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~~t~~ 217 (491)
.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++..
T Consensus 81 ~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~-~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~ 157 (262)
T cd05572 81 WTILRD--RGLFDEYTARFYIACVVLAFEYLHNRG-IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPE 157 (262)
T ss_pred HHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcC
Confidence 999963 356899999999999999999999998 999999999999999999999999998765443 23457889
Q ss_pred CCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCch--hhHhhhccccccccccccCCCCchhHHHHHHHHHHhccC
Q 011184 218 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA--LDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 295 (491)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~ 295 (491)
|++||.+.+..++.++|+||||+++|+|++|..|+.... ....... +........++...+.++.+++.+||+.
T Consensus 158 ~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 233 (262)
T cd05572 158 YVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYND----ILKGNGKLEFPNYIDKAAKDLIKQLLRR 233 (262)
T ss_pred ccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHH----HhccCCCCCCCcccCHHHHHHHHHHccC
Confidence 999999988889999999999999999999998876543 1111111 1111112234444578999999999999
Q ss_pred CCCCCCC-----hhHHHH
Q 011184 296 EPRERPN-----PKSLVT 308 (491)
Q Consensus 296 dp~~Rps-----~~~il~ 308 (491)
+|.+||+ +.++++
T Consensus 234 ~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 234 NPEERLGNLKGGIKDIKK 251 (262)
T ss_pred ChhhCcCCcccCHHHHhc
Confidence 9999999 777776
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=292.78 Aligned_cols=242 Identities=19% Similarity=0.306 Sum_probs=201.5
Q ss_pred ccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 59 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
++++..||.|++|.||+++.. +++.|+||++..... .....+.+|+..+.+++|+||+++++++..++..++||||++
T Consensus 3 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (264)
T cd06623 3 LERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMD 82 (264)
T ss_pred ceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecC
Confidence 456677799999999999955 589999999876543 235679999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccccceeeCCCCCeEEccCCCcccCCCCC----c
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----S 211 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~ 211 (491)
+++|.+++.. ...+++..+..++.|++.||.|||+ .+ ++|+||+|+||+++.++.++|+|||++....... .
T Consensus 83 ~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lh~~~~-~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~ 159 (264)
T cd06623 83 GGSLADLLKK--VGKIPEPVLAYIARQILKGLDYLHTKRH-IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNT 159 (264)
T ss_pred CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhccCC-CccCCCCHHHEEECCCCCEEEccCccceecccCCCcccc
Confidence 9999999964 3678999999999999999999999 98 9999999999999999999999999987654322 3
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCch---hhHhhhccccccccccccCCCCch-hHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA---LDLIRDRNLQMLTDSCLEGQFTDD-DGTELVR 287 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 287 (491)
..++..|+|||.+.+..++.++|+||||+++|+|++|..|+.... ....... +.... ....+.. .+..+.+
T Consensus 160 ~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~l~~ 234 (264)
T cd06623 160 FVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQA----ICDGP-PPSLPAEEFSPEFRD 234 (264)
T ss_pred eeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHH----HhcCC-CCCCCcccCCHHHHH
Confidence 356789999999998889999999999999999999998875442 1111111 11111 1122333 6689999
Q ss_pred HHHHhccCCCCCCCChhHHHH
Q 011184 288 LASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~ 308 (491)
++.+||..+|++||++.++++
T Consensus 235 li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 235 FISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred HHHHHccCChhhCCCHHHHHh
Confidence 999999999999999999987
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=294.45 Aligned_cols=246 Identities=15% Similarity=0.197 Sum_probs=195.3
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCChhHHHHHHHHHhcc-CCCCcceEEeEeecCC------eeE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGD------ERL 129 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~------~~~ 129 (491)
.+++++.+|.|++|.||+|... +++.+++|++..... ....+.+|+.+++++ .|+||+++++++.... ..+
T Consensus 7 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 85 (275)
T cd06608 7 IFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLW 85 (275)
T ss_pred heeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEE
Confidence 4566778899999999999964 578999999875442 346789999999999 7999999999997644 489
Q ss_pred EEEecCCCCCHHHHhcccC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC
Q 011184 130 LVAEYMPNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 207 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 207 (491)
+||||+++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....
T Consensus 86 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~-i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~ 164 (275)
T cd06608 86 LVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK-VIHRDIKGQNILLTKNAEVKLVDFGVSAQLD 164 (275)
T ss_pred EEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHHHEEEccCCeEEECCCccceecc
Confidence 9999999999999886432 457899999999999999999999998 9999999999999999999999999886543
Q ss_pred CC----CccccCCCCCCcccccC-----CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCC
Q 011184 208 DG----KSYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 278 (491)
Q Consensus 208 ~~----~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (491)
.. ....++..|+|||.+.. ..++.++||||||+++++|++|..|+............... .......+
T Consensus 165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~ 241 (275)
T cd06608 165 STLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRN---PPPTLKSP 241 (275)
T ss_pred cchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhcc---CCCCCCch
Confidence 22 23457889999998754 23678999999999999999999887543211111111111 11111122
Q ss_pred chhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 279 DDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 279 ~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
...+..+.+++.+||..||++|||+.++++
T Consensus 242 ~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 242 ENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred hhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 335678999999999999999999999987
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=298.41 Aligned_cols=248 Identities=21% Similarity=0.314 Sum_probs=196.8
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCC--CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
.+++++.+|.|++|.||+|... +++.||||+++.... .....+.+|++++++++|+||+++++++..++..++||||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 3567778899999999999954 588999999865322 2346789999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC----
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 210 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 210 (491)
++++.+..+.. ....+++..+..++.||+.||.|||+.+ ++|+||+|+||++++++.+||+|||++.......
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (288)
T cd07833 82 VERTLLELLEA--SPGGLPPDAVRSYIWQLLQAIAYCHSHN-IIHRDIKPENILVSESGVLKLCDFGFARALRARPASPL 158 (288)
T ss_pred CCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEEeeecccccCCCccccc
Confidence 99877766554 3456899999999999999999999998 9999999999999999999999999987654322
Q ss_pred -ccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhc--------------------ccc--
Q 011184 211 -SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR--------------------NLQ-- 266 (491)
Q Consensus 211 -~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~--------------------~~~-- 266 (491)
...++..|+|||++.+. .++.++||||||+++|+|++|..|+........... ...
T Consensus 159 ~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07833 159 TDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGV 238 (288)
T ss_pred cCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccccc
Confidence 34567889999999887 789999999999999999999987764321110000 000
Q ss_pred ccccc----cccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 267 MLTDS----CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 267 ~~~~~----~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
..... .....++..++.++.+++.+||..+|++|||+++++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 239 AFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred ccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 00000 0011123344788999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-39 Score=312.58 Aligned_cols=238 Identities=17% Similarity=0.223 Sum_probs=193.4
Q ss_pred ccCCCCCccEEEEEEE-CCCCEEEEEEeCC----CCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCe--eEEEEecC
Q 011184 63 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNR----MAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE--RLLVAEYM 135 (491)
Q Consensus 63 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~----~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~--~~lv~e~~ 135 (491)
.+||+|+|-+||+|.. .+|-.||--.++. ......++|..|+.+|+.|+||||++++.+|.+... +.+|+|.+
T Consensus 46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~ 125 (632)
T KOG0584|consen 46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELF 125 (632)
T ss_pred hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecc
Confidence 3569999999999995 4577777433321 112234789999999999999999999999988755 78999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccccceeeC-CCCCeEEccCCCcccCCC--CCc
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRD--GKS 211 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~--~~~ 211 (491)
..|+|..|+.+ -+.+....+..|++||+.||.|||++. +|||||||.+||+|+ ..|.|||+|+|||..... ...
T Consensus 126 TSGtLr~Y~kk--~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aks 203 (632)
T KOG0584|consen 126 TSGTLREYRKK--HRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKS 203 (632)
T ss_pred cCCcHHHHHHH--hccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccccce
Confidence 99999999974 467888999999999999999999986 599999999999997 568999999999987544 345
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchh-hHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
..|||.|||||+.. ..|+...||||||++++||+|+..|+..... ..+..+...++ .+..+...-.+++++||.
T Consensus 204 vIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGi----KP~sl~kV~dPevr~fIe 278 (632)
T KOG0584|consen 204 VIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGI----KPAALSKVKDPEVREFIE 278 (632)
T ss_pred eccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCC----CHHHhhccCCHHHHHHHH
Confidence 68999999999998 7899999999999999999999988764322 22222222222 222333334579999999
Q ss_pred HhccCCCCCCCChhHHHH
Q 011184 291 RCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~ 308 (491)
+||.. ..+|||+.|+|.
T Consensus 279 kCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 279 KCLAT-KSERLSAKELLK 295 (632)
T ss_pred HHhcC-chhccCHHHHhh
Confidence 99999 999999999997
|
|
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=296.17 Aligned_cols=244 Identities=18% Similarity=0.278 Sum_probs=190.7
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC-CChhHHHHHHHH-HhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-PDPRQFLEEARS-VGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
++++++.+|+|+||.||++.. .+|+.||||+++.... .....+..|+.+ ++.++||||+++++++..++..++||||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 81 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV 81 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence 356677889999999999995 4699999999875432 223456667665 5566899999999999999999999999
Q ss_pred CCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccccceeeCCCCCeEEccCCCcccCCCC--
Q 011184 135 MPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 135 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 209 (491)
++ ++|.+++... ....+++..++.++.||+.||.|||++ + ++||||||+||+++.++.+||+|||++......
T Consensus 82 ~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~-i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~ 159 (283)
T cd06617 82 MD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS-VIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVA 159 (283)
T ss_pred hc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeecccccccccccc
Confidence 97 7888877542 234689999999999999999999997 7 999999999999999999999999998765332
Q ss_pred -CccccCCCCCCcccccC----CCCCCCccchhHHHHHHHHHhCCCCCCCch--hhHhhhccccccccccccCCCCchhH
Q 011184 210 -KSYSTNLAFTPPEYLRT----GRVTPESVIYSFGTLLLDLLSGKHIPPSHA--LDLIRDRNLQMLTDSCLEGQFTDDDG 282 (491)
Q Consensus 210 -~~~~~t~~y~aPE~~~~----~~~~~~~Dv~slG~vl~elltg~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (491)
....++..|+|||.+.+ ..++.++|+||||+++|+|++|+.|+.... ...... ..............+
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 234 (283)
T cd06617 160 KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQ-----VVEEPSPQLPAEKFS 234 (283)
T ss_pred cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHH-----HHhcCCCCCCccccC
Confidence 22457888999998865 346889999999999999999998875321 111111 011111111122356
Q ss_pred HHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 283 TELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 283 ~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.++.+++.+||..+|.+||++.+++.
T Consensus 235 ~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 235 PEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 78999999999999999999999987
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=291.74 Aligned_cols=244 Identities=17% Similarity=0.269 Sum_probs=199.0
Q ss_pred cccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC--CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 60 NIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
.+...+|.|+||.||++.. .+|..||+|.+..... ...+.+.+|+++++.++|+||+++++.+..++..++|+||++
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (257)
T cd08225 3 EIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCD 82 (257)
T ss_pred eEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCC
Confidence 4556679999999999995 4588999999865422 234578899999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC-CeEEccCCCcccCCCCC----c
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDGK----S 211 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~~~----~ 211 (491)
+++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||++++++ .++|+|||.+....... .
T Consensus 83 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~ 161 (257)
T cd08225 83 GGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK-ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYT 161 (257)
T ss_pred CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEEcCCCCeEEecccccchhccCCcccccc
Confidence 999999997544446899999999999999999999998 99999999999999875 46999999887654332 2
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
..+++.|+|||.+.+..++.++|+||||+++++|++|..|+................ ........+..+.+++.+
T Consensus 162 ~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~ 236 (257)
T cd08225 162 CVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGY-----FAPISPNFSRDLRSLISQ 236 (257)
T ss_pred cCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccc-----CCCCCCCCCHHHHHHHHH
Confidence 347888999999988889999999999999999999998876543322221111111 112233456789999999
Q ss_pred hccCCCCCCCChhHHHHH
Q 011184 292 CLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~~ 309 (491)
||..+|++|||+.+++..
T Consensus 237 ~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 237 LFKVSPRDRPSITSILKR 254 (257)
T ss_pred HhccChhhCcCHHHHhhC
Confidence 999999999999999873
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-37 Score=288.25 Aligned_cols=245 Identities=20% Similarity=0.272 Sum_probs=201.7
Q ss_pred ccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCC
Q 011184 59 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 137 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~ 137 (491)
+.+...+|.|++|.||++... ++..+++|++..........+.+|+++++.++|+||+++++++..++..++++||+++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~ 81 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG 81 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence 445677899999999999964 6889999999766544567899999999999999999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC---Ccccc
Q 011184 138 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYST 214 (491)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~~ 214 (491)
++|.+++... ...+++..+..++.|++.+|.+||+.+ ++||||+|+||+++.++.++|+|||.+...... ....+
T Consensus 82 ~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 159 (253)
T cd05122 82 GSLKDLLKST-NQTLTESQIAYVCKELLKGLEYLHSNG-IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVG 159 (253)
T ss_pred CcHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhcCC-EecCCCCHHHEEEccCCeEEEeeccccccccccccccceec
Confidence 9999998642 257899999999999999999999998 999999999999999999999999998765543 34567
Q ss_pred CCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhcc
Q 011184 215 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 294 (491)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 294 (491)
+..|++||.+.+...+.++||||||+++++|++|+.|+.................. ........+..+.+++.+||+
T Consensus 160 ~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~ 236 (253)
T cd05122 160 TPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPP---GLRNPEKWSDEFKDFLKKCLQ 236 (253)
T ss_pred CCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCC---CcCcccccCHHHHHHHHHHcc
Confidence 88999999998888999999999999999999999887654211111111000000 001111235789999999999
Q ss_pred CCCCCCCChhHHHH
Q 011184 295 YEPRERPNPKSLVT 308 (491)
Q Consensus 295 ~dp~~Rps~~~il~ 308 (491)
.||++|||+.+++.
T Consensus 237 ~~p~~R~t~~~~l~ 250 (253)
T cd05122 237 KNPEKRPTAEQLLK 250 (253)
T ss_pred CChhhCCCHHHHhc
Confidence 99999999999986
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=294.50 Aligned_cols=239 Identities=18% Similarity=0.200 Sum_probs=188.3
Q ss_pred CCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC---ChhHHHHHHHHHhc---cCCCCcceEEeEeecCCeeEEEEecCCC
Q 011184 65 HGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQ---LRNNRLTNLLGCCCEGDERLLVAEYMPN 137 (491)
Q Consensus 65 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~---l~H~niv~~~~~~~~~~~~~lv~e~~~~ 137 (491)
||+|+||.||++.. .+++.+|+|.+...... ....+.+|..+++. .+||||+.+++++..++..++||||+++
T Consensus 2 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (279)
T cd05633 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNG 81 (279)
T ss_pred cccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCC
Confidence 69999999999995 56899999998654322 12334555544444 4799999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC--CccccC
Q 011184 138 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYSTN 215 (491)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~~~~t 215 (491)
++|.+++.. .+.+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.++|+|||++...... ....++
T Consensus 82 ~~L~~~i~~--~~~l~~~~~~~i~~qi~~al~~lH~~~-ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 158 (279)
T cd05633 82 GDLHYHLSQ--HGVFSEKEMRFYATEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT 158 (279)
T ss_pred CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCC
Confidence 999998863 456999999999999999999999999 999999999999999999999999998654322 234578
Q ss_pred CCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhcc
Q 011184 216 LAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 294 (491)
Q Consensus 216 ~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 294 (491)
..|+|||.+.. ..++.++|||||||++++|++|..||.......... ..... ......++...+.++.+++.+||.
T Consensus 159 ~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~li~~~l~ 235 (279)
T cd05633 159 HGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE--IDRMT-LTVNVELPDSFSPELKSLLEGLLQ 235 (279)
T ss_pred cCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH--HHHHh-hcCCcCCccccCHHHHHHHHHHhc
Confidence 99999999864 458899999999999999999999885432111100 00000 011223455667899999999999
Q ss_pred CCCCCCC-----ChhHHHHH
Q 011184 295 YEPRERP-----NPKSLVTA 309 (491)
Q Consensus 295 ~dp~~Rp-----s~~~il~~ 309 (491)
.||.+|| |++++++.
T Consensus 236 ~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 236 RDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred CCHHHhcCCCCCCHHHHHhC
Confidence 9999999 58888874
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-38 Score=304.01 Aligned_cols=247 Identities=21% Similarity=0.278 Sum_probs=211.8
Q ss_pred cCCccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEE
Q 011184 54 SGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 54 ~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
..+..+.++..||+|.|+.|.+++ ..++..||||.+.+..... ...+.+|++++..|.|||||+++.+......+|+
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL 132 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence 335567788899999999999999 4569999999997765433 3458899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 209 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 209 (491)
||||+.+|.+++++.. .+.+.+.....++.|+.++++|||+++ |||||||++|||++.+.++||+|||++..+..+
T Consensus 133 V~eya~~ge~~~yl~~--~gr~~e~~ar~~F~q~vsaveYcH~k~-ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~ 209 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVK--HGRMKEKEARAKFRQIVSAVEYCHSKN-IVHRDLKAENILLDENMNIKIADFGFSTFFDYGL 209 (596)
T ss_pred EEEeccCchhHHHHHh--cccchhhhhhhhhHHHHHHHHHHhhcc-eeccccchhhcccccccceeeeccccceeecccc
Confidence 9999999999999974 455667888999999999999999998 999999999999999999999999998876543
Q ss_pred --CccccCCCCCCcccccCCCC-CCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHH
Q 011184 210 --KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 210 --~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
.+.+|++.|.|||++.+..+ ++.+|+||+|+++|-|+.|..||.+......+...+.... .++-.++.++.
T Consensus 210 ~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~------rIp~~ms~dce 283 (596)
T KOG0586|consen 210 MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKY------RIPFYMSCDCE 283 (596)
T ss_pred cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeee------cccceeechhH
Confidence 57789999999999998775 6799999999999999999999987665544433332221 23445667899
Q ss_pred HHHHHhccCCCCCCCChhHHHHH
Q 011184 287 RLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~ 309 (491)
++|+++|-.+|.+|++.++|.+.
T Consensus 284 ~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 284 DLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred HHHHHhhccCccccCCHHHhhhh
Confidence 99999999999999999999874
|
|
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-37 Score=299.76 Aligned_cols=243 Identities=19% Similarity=0.229 Sum_probs=188.2
Q ss_pred CCCCccEEEEEEE-CCCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCCHHH
Q 011184 66 GEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 142 (491)
Q Consensus 66 G~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gsL~~ 142 (491)
|.|+||+||++.. .+|+.||||++....... .+.+.+|+.+++.++||||++++++|..++..++||||+.+++|.+
T Consensus 9 g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~ 88 (328)
T cd08226 9 GFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANS 88 (328)
T ss_pred cccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHHH
Confidence 4559999999995 579999999987543222 3568899999999999999999999999999999999999999999
Q ss_pred HhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----C-------Cc
Q 011184 143 HLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----G-------KS 211 (491)
Q Consensus 143 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~-------~~ 211 (491)
++.......+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.++++||+.+..... . ..
T Consensus 89 ~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (328)
T cd08226 89 LLKTYFPEGMSEALIGNILFGALRGLNYLHQNG-YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQF 167 (328)
T ss_pred HHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccccccccc
Confidence 987544456899999999999999999999998 99999999999999999999999985432211 0 11
Q ss_pred cccCCCCCCcccccCC--CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccc-----------------------
Q 011184 212 YSTNLAFTPPEYLRTG--RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ----------------------- 266 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~--~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~----------------------- 266 (491)
..++..|++||++.+. .++.++|||||||++|+|++|..|+..............
T Consensus 168 ~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (328)
T cd08226 168 STSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQ 247 (328)
T ss_pred ccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccch
Confidence 1245679999999764 478899999999999999999988754321111000000
Q ss_pred ------------------ccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 267 ------------------MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 267 ------------------~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
..............++..+.+|+.+||+.||++|||+.++++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 248 SGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred hhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 0000000111123466789999999999999999999999863
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-37 Score=296.38 Aligned_cols=260 Identities=22% Similarity=0.265 Sum_probs=197.9
Q ss_pred CCccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecC--CeeE
Q 011184 55 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERL 129 (491)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~--~~~~ 129 (491)
+...+++++.||.|+||.||+|.. .+|+.||+|+++...... ...+.+|+.++++++|+||+++++++... +..+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 345677888889999999999995 468999999986443222 33567899999999999999999998765 5689
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 209 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 209 (491)
+||||+. ++|.+++.. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||++......
T Consensus 85 lv~e~~~-~~l~~~l~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 85 LVMEYCE-QDLASLLDN-MPTPFSESQVKCLMLQLLRGLQYLHENF-IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP 161 (309)
T ss_pred EEEecCC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence 9999997 588888864 2357899999999999999999999999 999999999999999999999999998765432
Q ss_pred ----CccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccc---------------
Q 011184 210 ----KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT--------------- 269 (491)
Q Consensus 210 ----~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~--------------- 269 (491)
....++..|+|||.+.+ ..++.++||||||+++|+|++|..|+...............+.
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
T cd07845 162 AKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPL 241 (309)
T ss_pred cCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccc
Confidence 12234678999999875 4578999999999999999999988764432211110000000
Q ss_pred --ccccc-CC------CCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccCCC
Q 011184 270 --DSCLE-GQ------FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 319 (491)
Q Consensus 270 --~~~~~-~~------~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~ 319 (491)
..... .. .....++.+.++|.+||+.||++|||+.+++. ..+......
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~--h~~f~~~~~ 298 (309)
T cd07845 242 VGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE--SSYFKEKPL 298 (309)
T ss_pred cccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc--ChhhccCCC
Confidence 00000 00 01124678899999999999999999999997 444443333
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-37 Score=294.16 Aligned_cols=248 Identities=21% Similarity=0.239 Sum_probs=191.0
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCC-hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
.|.+++.||+|+||.||+|.. .++..||+|++....... ...+.+|+.+++.++|+||+++++++..++..++||||+
T Consensus 6 ~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 85 (291)
T cd07870 6 SYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYM 85 (291)
T ss_pred eeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEecc
Confidence 456677889999999999994 468899999986543322 346789999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----Cc
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 211 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 211 (491)
. ++|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.+++++|+|||+++..... ..
T Consensus 86 ~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 162 (291)
T cd07870 86 H-TDLAQYMIQ-HPGGLHPYNVRLFMFQLLRGLAYIHGQH-ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSS 162 (291)
T ss_pred c-CCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCC
Confidence 6 677776653 2346788889999999999999999998 999999999999999999999999998753321 22
Q ss_pred cccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhh--Hhhhc----------------cc----ccc
Q 011184 212 YSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALD--LIRDR----------------NL----QML 268 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~--~~~~~----------------~~----~~~ 268 (491)
..+++.|+|||.+.+. .++.++||||||+++|+|++|..||...... .+... .. ...
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (291)
T cd07870 163 EVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEW 242 (291)
T ss_pred ccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchh
Confidence 3467899999998764 4788999999999999999999887543211 00000 00 000
Q ss_pred ccccccCCC---C--chhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 269 TDSCLEGQF---T--DDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 269 ~~~~~~~~~---~--~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
......... . ...+..+.+++.+||..||.+|||+.+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 243 FLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred ccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 000000000 0 012467899999999999999999999976
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-37 Score=294.44 Aligned_cols=247 Identities=21% Similarity=0.272 Sum_probs=194.4
Q ss_pred cccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC--CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 60 NIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
++++.+|.|++|.||+|.. .+|..||||++..... .....+.+|+++++.++||||+++++++..++..++||||++
T Consensus 2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~ 81 (283)
T cd07835 2 QKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD 81 (283)
T ss_pred chheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC
Confidence 4567789999999999995 4699999999865432 223568899999999999999999999999999999999995
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----Ccc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSY 212 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 212 (491)
++|.+++.......+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++...... ...
T Consensus 82 -~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~-~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~ 159 (283)
T cd07835 82 -LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR-VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHE 159 (283)
T ss_pred -cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCcc
Confidence 79999986533346899999999999999999999998 999999999999999999999999998754322 122
Q ss_pred ccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccc--------------cc-------cc
Q 011184 213 STNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--------------ML-------TD 270 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~--------------~~-------~~ 270 (491)
.++..|+|||++.+. .++.++||||||+++|+|++|..||.............. .+ ..
T Consensus 160 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (283)
T cd07835 160 VVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPK 239 (283)
T ss_pred ccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhccc
Confidence 457889999988764 478899999999999999999988754322110000000 00 00
Q ss_pred --ccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 271 --SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 271 --~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
...........+..+.+++.+||+.||.+|||+++++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 240 WARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred ccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00001122345578999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-37 Score=294.95 Aligned_cols=250 Identities=19% Similarity=0.235 Sum_probs=193.6
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC--CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
..++++..||.|++|+||+|.. .+|+.||+|.+..... .....+.+|++++++++||||+++++++..++..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 3567778889999999999995 4688999999865432 224568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC-CCCeEEccCCCcccCCCC---
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRDG--- 209 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla~~~~~~--- 209 (491)
|++ ++|.+++.......+++..+..++.||+.||.|||+++ ++||||+|+||+++. ++.+||+|||++......
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~-i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~ 159 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR-VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRT 159 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCcceEEEECCCCEEEEcccccccccCCCccc
Confidence 996 68888876434445678888999999999999999998 999999999999985 567999999998754322
Q ss_pred -CccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccc-------cc-------cc---
Q 011184 210 -KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-------ML-------TD--- 270 (491)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~-------~~-------~~--- 270 (491)
....+++.|+|||.+.+. .++.++||||||+++|+|+||..|+.............. .. .+
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (294)
T PLN00009 160 FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKS 239 (294)
T ss_pred cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhh
Confidence 233467889999988764 478899999999999999999988754322111000000 00 00
Q ss_pred ------ccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 271 ------SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 271 ------~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
...........+..+.+++.+||+.+|++||++.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 240 AFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred hcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000012345678999999999999999999999987
|
|
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-37 Score=295.48 Aligned_cols=241 Identities=20% Similarity=0.243 Sum_probs=194.6
Q ss_pred ccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCC---hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 61 IVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
.+.++|.|++|+||+|+. .++..|++|++....... ...+.+|+++++.++|||++++++++...+..++||||+.
T Consensus 25 ~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 104 (313)
T cd06633 25 GLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL 104 (313)
T ss_pred cceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC
Confidence 345689999999999995 468899999986543222 3467889999999999999999999999999999999996
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCCccccCC
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL 216 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t~ 216 (491)
++|.+++.. ...++++..+..++.||+.+|.|||+.+ ++|+||+|+||+++.++.++|+|||++..........++.
T Consensus 105 -~~l~~~l~~-~~~~l~~~~~~~~~~qi~~al~~LH~~g-i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~~~ 181 (313)
T cd06633 105 -GSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-MIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTP 181 (313)
T ss_pred -CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccccc
Confidence 678777753 3457899999999999999999999999 9999999999999999999999999987665555667889
Q ss_pred CCCCccccc---CCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhc
Q 011184 217 AFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 293 (491)
Q Consensus 217 ~y~aPE~~~---~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 293 (491)
.|+|||++. ...++.++||||||+++|+|++|..|+................ .........+..+.+++.+||
T Consensus 182 ~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~li~~~l 257 (313)
T cd06633 182 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQND----SPTLQSNEWTDSFRGFVDYCL 257 (313)
T ss_pred cccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC----CCCCCccccCHHHHHHHHHHc
Confidence 999999984 3558889999999999999999998875432211111111100 111112234567999999999
Q ss_pred cCCCCCCCChhHHHH
Q 011184 294 QYEPRERPNPKSLVT 308 (491)
Q Consensus 294 ~~dp~~Rps~~~il~ 308 (491)
+.+|.+||++.+++.
T Consensus 258 ~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 258 QKIPQERPASAELLR 272 (313)
T ss_pred cCChhhCcCHHHHhc
Confidence 999999999999986
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=303.02 Aligned_cols=247 Identities=17% Similarity=0.253 Sum_probs=191.2
Q ss_pred cccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecC-----CeeEE
Q 011184 58 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEG-----DERLL 130 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~-----~~~~l 130 (491)
.+++++.||+|++|+||+|. ..+|+.||||++..... .....+.+|+.+++.++||||+++++++... ...++
T Consensus 6 ~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 85 (336)
T cd07849 6 RYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYI 85 (336)
T ss_pred ceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEE
Confidence 45677788999999999999 45689999999864322 2345688899999999999999999987654 35799
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 209 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 209 (491)
|+||+. ++|.+.+. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++......
T Consensus 86 v~e~~~-~~l~~~~~---~~~l~~~~~~~i~~ql~~aL~~LH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~ 160 (336)
T cd07849 86 VQELME-TDLYKLIK---TQHLSNDHIQYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTNCDLKICDFGLARIADPEH 160 (336)
T ss_pred Eehhcc-cCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEECCCCCEEECcccceeeccccc
Confidence 999997 68888774 467999999999999999999999999 999999999999999999999999998754322
Q ss_pred ------CccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcc-----------cccccc-
Q 011184 210 ------KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------LQMLTD- 270 (491)
Q Consensus 210 ------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~-----------~~~~~~- 270 (491)
....++..|+|||.+.+ ..++.++||||||+++|+|++|+.|+............ ...+..
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (336)
T cd07849 161 DHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISL 240 (336)
T ss_pred cccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhch
Confidence 12356888999998754 45889999999999999999999888653211100000 000000
Q ss_pred ----------cccc---CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 271 ----------SCLE---GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 271 ----------~~~~---~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
.... .......+.++.+++.+||+.+|++|||+.+++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 241 RARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred hhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000 00112345679999999999999999999999985
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-37 Score=294.68 Aligned_cols=247 Identities=13% Similarity=0.089 Sum_probs=182.7
Q ss_pred cccccccCCCCCccEEEEEEECC----CCEEEEEEeCCCCCCCh-----------hHHHHHHHHHhccCCCCcceEEeEe
Q 011184 58 VENIVSEHGEKAPNVVYKGKLEN----QRRIAVKRFNRMAWPDP-----------RQFLEEARSVGQLRNNRLTNLLGCC 122 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~H~niv~~~~~~ 122 (491)
.+++.+.||+|+||+||+|...+ +..+|+|+......... .....+...+..++|+||+++++++
T Consensus 13 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~ 92 (294)
T PHA02882 13 EWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCG 92 (294)
T ss_pred ceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEee
Confidence 56778888999999999999543 45667776432221110 1122334455667899999999987
Q ss_pred ecCC----eeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEc
Q 011184 123 CEGD----ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLS 198 (491)
Q Consensus 123 ~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~ 198 (491)
.... ..++++|++. .++.+.+.. ....++..+..++.|++.||.|||+.+ ++||||||+|||++.++.++|+
T Consensus 93 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiHrDiKp~Nill~~~~~~~l~ 168 (294)
T PHA02882 93 SFKRCRMYYRFILLEKLV-ENTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIHEHG-ISHGDIKPENIMVDGNNRGYII 168 (294)
T ss_pred eEecCCceEEEEEEehhc-cCHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCcEEEE
Confidence 6543 3478888875 577766642 234678888999999999999999998 9999999999999999999999
Q ss_pred cCCCcccCCC-----------CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchh-hH-h---hh
Q 011184 199 TFGLMKNSRD-----------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DL-I---RD 262 (491)
Q Consensus 199 Dfgla~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~-~~-~---~~ 262 (491)
|||+++.... .....||+.|+|||++.+..++.++|||||||+++||++|+.||..... .. + ..
T Consensus 169 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~ 248 (294)
T PHA02882 169 DYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKC 248 (294)
T ss_pred EcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHH
Confidence 9999875421 1223589999999999998999999999999999999999988865421 11 1 01
Q ss_pred ccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhc
Q 011184 263 RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 311 (491)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~ 311 (491)
.....+.... .....+++.+.+++..||+.+|++||++.++++.|+
T Consensus 249 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 249 DFIKRLHEGK---IKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HHHHHhhhhh---hccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 1111111111 112345678999999999999999999999998763
|
|
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-37 Score=287.03 Aligned_cols=244 Identities=20% Similarity=0.263 Sum_probs=203.6
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC--CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
+.+++.+|.|++|.||++.. .++..|++|++..... .....+.+|+++++.++|||++++.+.+..++..++|+||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd08215 2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYA 81 (258)
T ss_pred ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEec
Confidence 45567789999999999995 4689999999976543 34567889999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC---
Q 011184 136 PNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--- 210 (491)
Q Consensus 136 ~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~--- 210 (491)
++++|.+++.... ...+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~-~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~ 160 (258)
T cd08215 82 DGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK-ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLA 160 (258)
T ss_pred CCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC-EecccCChHHeEEcCCCcEEECCccceeecccCccee
Confidence 9999999987532 367899999999999999999999998 9999999999999999999999999987654432
Q ss_pred -ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHH
Q 011184 211 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 289 (491)
Q Consensus 211 -~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 289 (491)
...+++.|+|||.+.+..++.++|+||||+++++|++|..|+.......+........ ....+...+..+.+++
T Consensus 161 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i 235 (258)
T cd08215 161 KTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQ-----YPPIPSQYSSELRNLV 235 (258)
T ss_pred cceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCC-----CCCCCCCCCHHHHHHH
Confidence 3457788999999988889999999999999999999998875543322222211111 1233445668899999
Q ss_pred HHhccCCCCCCCChhHHHH
Q 011184 290 SRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~ 308 (491)
.+||..+|++|||+.+++.
T Consensus 236 ~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 236 SSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred HHHcCCChhhCcCHHHHhc
Confidence 9999999999999999987
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-37 Score=292.31 Aligned_cols=246 Identities=19% Similarity=0.242 Sum_probs=190.5
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccC-CCCcceEEeEeecC--CeeEEEEe
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLR-NNRLTNLLGCCCEG--DERLLVAE 133 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~--~~~~lv~e 133 (491)
+++++.+|+|+||.||++.. .+++.||+|+++..... ......+|+.++.++. |+||+++++++.++ +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 35677889999999999994 56899999998754322 2234567899999985 99999999999887 88999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC---C
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---K 210 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~ 210 (491)
|++ ++|.+.+.. ....+++..+..++.|++.||.|||+.+ ++||||+|+||+++. +.+||+|||++...... .
T Consensus 81 ~~~-~~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~ 156 (282)
T cd07831 81 LMD-MNLYELIKG-RKRPLPEKRVKSYMYQLLKSLDHMHRNG-IFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYT 156 (282)
T ss_pred cCC-ccHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecccCHHHEEEcC-CCeEEEecccccccccCCCcC
Confidence 997 688888764 2356899999999999999999999999 999999999999999 99999999998765332 2
Q ss_pred ccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccc-------c---------ccccccc
Q 011184 211 SYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL-------Q---------MLTDSCL 273 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~-------~---------~~~~~~~ 273 (491)
...++..|+|||.+.+ ..++.++|||||||++|||++|..|++............ . .......
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (282)
T cd07831 157 EYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNF 236 (282)
T ss_pred CCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccC
Confidence 3456889999997654 457889999999999999999998886542211000000 0 0000000
Q ss_pred cC-------CCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 274 EG-------QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 274 ~~-------~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.. ......+..+.+++.+||+.+|++||++++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 237 PSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 00 011245689999999999999999999999987
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=296.11 Aligned_cols=245 Identities=18% Similarity=0.242 Sum_probs=205.1
Q ss_pred cCCccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeE
Q 011184 54 SGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 129 (491)
Q Consensus 54 ~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~ 129 (491)
+.|..++++ |+|+||.||-+. -.+|+-+|.|++.+.. .......+.|..+|++++.+.||.+--.|...+.+|
T Consensus 185 n~F~~~Rvl---GkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LC 261 (591)
T KOG0986|consen 185 NTFRVYRVL---GKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALC 261 (591)
T ss_pred cceeeeEEE---ecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceE
Confidence 447777766 999999999999 4569999999985422 223456788999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 209 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 209 (491)
+|+..|.||+|.-+|....+..+++.....++.+|+.||++||+.+ ||+|||||+|||+|+.|+++|+|+|+|.....+
T Consensus 262 lVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~-iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 262 LVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR-IVYRDLKPENILLDDHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred EEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc-eeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence 9999999999999998766678999999999999999999999998 999999999999999999999999999987765
Q ss_pred Cc---cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHH
Q 011184 210 KS---YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 210 ~~---~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
.. ..||.+|||||++....|+...|.|||||+||||+.|+.||............-..+.. ....++...++++.
T Consensus 341 ~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~--~~~ey~~kFS~eak 418 (591)
T KOG0986|consen 341 KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLE--DPEEYSDKFSEEAK 418 (591)
T ss_pred CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhc--chhhcccccCHHHH
Confidence 43 37899999999999999999999999999999999999998654222111111111111 12356778889999
Q ss_pred HHHHHhccCCCCCCCChh
Q 011184 287 RLASRCLQYEPRERPNPK 304 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~~ 304 (491)
+|....|++||.+|...+
T Consensus 419 slc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 419 SLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred HHHHHHHccCHHHhccCC
Confidence 999999999999996543
|
|
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=317.79 Aligned_cols=250 Identities=16% Similarity=0.188 Sum_probs=183.2
Q ss_pred ccccccccCCCCCccEEEEEEECC--CCEEEEEEeC--------------C---CCCCChhHHHHHHHHHhccCCCCcce
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLEN--QRRIAVKRFN--------------R---MAWPDPRQFLEEARSVGQLRNNRLTN 117 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~--~~~vavK~~~--------------~---~~~~~~~~~~~E~~~l~~l~H~niv~ 117 (491)
..|++++.||+|+||+||++..+. +..+++|.+. + ........+.+|+.+|++++||||++
T Consensus 148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~ 227 (501)
T PHA03210 148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILK 227 (501)
T ss_pred hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCc
Confidence 467888999999999999987432 2222222111 0 01112346889999999999999999
Q ss_pred EEeEeecCCeeEEEEecCCCCCHHHHhcccC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCC
Q 011184 118 LLGCCCEGDERLLVAEYMPNETLAKHLFHWE---THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 194 (491)
Q Consensus 118 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~ 194 (491)
+++++...+..++|++++. ++|.+++.... ...........++.||+.||.|||+++ ||||||||+|||++.++.
T Consensus 228 l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g-IiHrDLKP~NILl~~~~~ 305 (501)
T PHA03210 228 IEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK-LIHRDIKLENIFLNCDGK 305 (501)
T ss_pred EeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCC
Confidence 9999999999999999995 67777764321 122345667889999999999999999 999999999999999999
Q ss_pred eEEccCCCcccCCCC-----CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchh----hHhhh-cc
Q 011184 195 PRLSTFGLMKNSRDG-----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL----DLIRD-RN 264 (491)
Q Consensus 195 ~kl~Dfgla~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~----~~~~~-~~ 264 (491)
+||+|||++...... ....||+.|+|||++.+..++.++|||||||++|||++|..++..... ..+.. ..
T Consensus 306 vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~ 385 (501)
T PHA03210 306 IVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIID 385 (501)
T ss_pred EEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHH
Confidence 999999999765432 234689999999999998999999999999999999999865432211 00000 00
Q ss_pred c-----ccccc----------cc----ccCCC-----CchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 265 L-----QMLTD----------SC----LEGQF-----TDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 265 ~-----~~~~~----------~~----~~~~~-----~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
. ..+.+ .. ....+ ...++.++.+++.+||+.||++|||+.+++.
T Consensus 386 ~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 386 SLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred hcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0 00000 00 00000 0123456788899999999999999999997
|
|
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-37 Score=294.95 Aligned_cols=244 Identities=20% Similarity=0.225 Sum_probs=196.0
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC---ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
+..++.+|.|++|.||+|+. .++..||+|.+...... ....+.+|+++++.++|+|++++++++......++||||
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 96 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence 34456779999999999994 46889999998643221 234678899999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCCcccc
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST 214 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 214 (491)
+. |+|.+.+.. ...++++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++..........+
T Consensus 97 ~~-~~l~~~~~~-~~~~l~~~~~~~~~~~l~~~l~~LH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 173 (308)
T cd06634 97 CL-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVG 173 (308)
T ss_pred cC-CCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHhEEECCCCcEEECCcccceeecCcccccC
Confidence 97 688777653 2456899999999999999999999998 99999999999999999999999999887666666678
Q ss_pred CCCCCCccccc---CCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 215 NLAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 215 t~~y~aPE~~~---~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
+..|+|||.+. ...++.++|||||||++|+|++|..|+............... ..........+..+.++|.+
T Consensus 174 ~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~ 249 (308)
T cd06634 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----ESPALQSGHWSEYFRNFVDS 249 (308)
T ss_pred CccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhc----CCCCcCcccccHHHHHHHHH
Confidence 89999999975 345788999999999999999999887543221111111111 11111123456789999999
Q ss_pred hccCCCCCCCChhHHHHH
Q 011184 292 CLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~~ 309 (491)
||+.+|.+||++.+++..
T Consensus 250 cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 250 CLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred HhhCCcccCCCHHHHhhC
Confidence 999999999999999984
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-37 Score=300.35 Aligned_cols=247 Identities=15% Similarity=0.213 Sum_probs=192.9
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC--CCChhHHHHHHHHHhccCCCCcceEEeEeecC------Ce
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG------DE 127 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~------~~ 127 (491)
..+++++.||+|+||.||++.. .+++.||||.+.... ......+.+|+.++++++||||+++++++... ..
T Consensus 16 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 95 (353)
T cd07850 16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQD 95 (353)
T ss_pred cceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCc
Confidence 3466778889999999999994 568999999986432 22245677899999999999999999988644 34
Q ss_pred eEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC
Q 011184 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 207 (491)
Q Consensus 128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 207 (491)
.++||||+. ++|.+.+.. .++...+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++....
T Consensus 96 ~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~g-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 169 (353)
T cd07850 96 VYLVMELMD-ANLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 169 (353)
T ss_pred EEEEEeccC-CCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEccCccceeCC
Confidence 799999996 688888742 2888999999999999999999998 9999999999999999999999999987654
Q ss_pred CC---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccc------------------
Q 011184 208 DG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ------------------ 266 (491)
Q Consensus 208 ~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~------------------ 266 (491)
.. ....++..|+|||.+.+..++.++|||||||++++|++|+.||..............
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (353)
T cd07850 170 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVR 249 (353)
T ss_pred CCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhh
Confidence 32 233568899999999988899999999999999999999988864321100000000
Q ss_pred ---------------ccccccc----cCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 267 ---------------MLTDSCL----EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 267 ---------------~~~~~~~----~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
.+..... ....+...+..+.+++.+||+.||++|||+.+++..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 250 NYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000000 000122346678999999999999999999999973
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=285.90 Aligned_cols=243 Identities=19% Similarity=0.261 Sum_probs=200.8
Q ss_pred cccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCC--CChhHHHHHHHHHhccCCCCcceEEeEeecC--CeeEEEEec
Q 011184 60 NIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLLVAEY 134 (491)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--~~~~lv~e~ 134 (491)
.+...+|.|++|.||+|... ++..|++|++..... ...+.+.+|+.++++++||||+++++.+... +..++|+||
T Consensus 3 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 82 (260)
T cd06606 3 TRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEY 82 (260)
T ss_pred eeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEe
Confidence 34456699999999999965 689999999875543 2356789999999999999999999999988 889999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC----
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 210 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 210 (491)
+++++|.+++.. ...+++..+..++.|++.+|.|||+.+ ++|+||+|+||+++.++.++|+|||.+.......
T Consensus 83 ~~~~~L~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~-~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 159 (260)
T cd06606 83 VSGGSLSSLLKK--FGKLPEPVIRKYTRQILEGLAYLHSNG-IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEG 159 (260)
T ss_pred cCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEcCCCCEEEcccccEEeccccccccc
Confidence 999999999874 337899999999999999999999998 9999999999999999999999999987654432
Q ss_pred --ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHH
Q 011184 211 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 288 (491)
Q Consensus 211 --~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (491)
...++..|++||.+.+...+.++||||||+++++|++|..|+........ ....+.........+...+..+.++
T Consensus 160 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~ 236 (260)
T cd06606 160 TGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMA---ALYKIGSSGEPPEIPEHLSEEAKDF 236 (260)
T ss_pred ccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH---HHHhccccCCCcCCCcccCHHHHHH
Confidence 34577899999999888899999999999999999999988765431100 0011111112223445567899999
Q ss_pred HHHhccCCCCCCCChhHHHH
Q 011184 289 ASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~ 308 (491)
+.+||+.+|.+||++.+++.
T Consensus 237 i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 237 LRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred HHHhCcCChhhCCCHHHHhh
Confidence 99999999999999999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-37 Score=289.38 Aligned_cols=237 Identities=23% Similarity=0.264 Sum_probs=193.5
Q ss_pred CCCCCccEEEEEEEC-CCCEEEEEEeCCCCC---CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCCH
Q 011184 65 HGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL 140 (491)
Q Consensus 65 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gsL 140 (491)
+|.|+||.||++... +|+.+++|.+..... .....+.+|++++++++||||+++++.+..++..++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 589999999999965 489999999975443 2345788999999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-----------
Q 011184 141 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----------- 209 (491)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----------- 209 (491)
.+++.. ...+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~~l~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~-i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 157 (265)
T cd05579 81 ASLLEN--VGSLDEDVARIYIAEIVLALEYLHSNG-IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKE 157 (265)
T ss_pred HHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcC-eecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccc
Confidence 999864 247899999999999999999999998 999999999999999999999999987654322
Q ss_pred -CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCch--hHHHHH
Q 011184 210 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD--DGTELV 286 (491)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 286 (491)
....++..|++||.+.....+.++||||||+++++|++|..|+................. ..+.. .+..+.
T Consensus 158 ~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 231 (265)
T cd05579 158 DKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKI------EWPEDVEVSDEAI 231 (265)
T ss_pred ccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCc------CCCccccCCHHHH
Confidence 123467889999999888899999999999999999999988765433322211111100 11122 367899
Q ss_pred HHHHHhccCCCCCCCChhHHHHHh
Q 011184 287 RLASRCLQYEPRERPNPKSLVTAL 310 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~L 310 (491)
+++.+||+.+|.+|||+..+.+.|
T Consensus 232 ~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 232 DLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred HHHHHHhcCCHhhcCCCccHHHHh
Confidence 999999999999999995554443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-37 Score=291.98 Aligned_cols=246 Identities=22% Similarity=0.291 Sum_probs=194.0
Q ss_pred cccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCC--CCChhHHHHHHHHHhccCCCCcceEEeEeecC--CeeEEEEec
Q 011184 60 NIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLLVAEY 134 (491)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--~~~~lv~e~ 134 (491)
++++.+|.|++|.||++... ++..+|+|++.... ......+.+|+++++.++|||++++++++... +..++||||
T Consensus 2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07840 2 EKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEY 81 (287)
T ss_pred eeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEecc
Confidence 56678899999999999954 58899999997653 22345688999999999999999999999888 789999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC----
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 210 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 210 (491)
++ ++|.+++... ...+++..++.++.||+.||.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 82 ~~-~~l~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~~-~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~ 158 (287)
T cd07840 82 MD-HDLTGLLDSP-EVKFTESQIKCYMKQLLEGLQYLHSNG-ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADY 158 (287)
T ss_pred cc-ccHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccc
Confidence 97 5898888642 257899999999999999999999998 9999999999999999999999999987654332
Q ss_pred -ccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccc-----------c-------
Q 011184 211 -SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT-----------D------- 270 (491)
Q Consensus 211 -~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~-----------~------- 270 (491)
...++..|+|||.+.+. .++.++||||||+++++|++|+.|+................. .
T Consensus 159 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07840 159 TNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENL 238 (287)
T ss_pred cccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhc
Confidence 23457789999987653 578999999999999999999988754432211111000000 0
Q ss_pred -------ccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 271 -------SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 271 -------~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
......+...++..+.+++.+||+.+|.+||++.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 239 KPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred cccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00000111113678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=284.85 Aligned_cols=242 Identities=22% Similarity=0.298 Sum_probs=201.0
Q ss_pred ccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCC--CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 59 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
+.+...+|.|++|.||++... +++.|++|.+..... .....+.+|++++++++|||++++++++..++..++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (254)
T cd06627 2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYA 81 (254)
T ss_pred ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecC
Confidence 455677899999999999854 588999999976554 23567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC----c
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----S 211 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~ 211 (491)
++++|.+++.. ...+++..+..++.|++.+|.|||+.+ ++||||+|+||+++.++.++|+|||++....... .
T Consensus 82 ~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 158 (254)
T cd06627 82 ENGSLRQIIKK--FGPFPESLVAVYVYQVLQGLAYLHEQG-VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDAS 158 (254)
T ss_pred CCCcHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCHHHEEECCCCCEEEeccccceecCCCcccccc
Confidence 99999999864 367899999999999999999999998 9999999999999999999999999987654432 2
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
..++..|++||...+..++.++||||||+++++|++|..|+............. .......+...+..+.+++.+
T Consensus 159 ~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~ 233 (254)
T cd06627 159 VVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIV-----QDDHPPLPEGISPELKDFLMQ 233 (254)
T ss_pred cccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHh-----ccCCCCCCCCCCHHHHHHHHH
Confidence 457888999999988778999999999999999999998875432111111100 011123445567899999999
Q ss_pred hccCCCCCCCChhHHHH
Q 011184 292 CLQYEPRERPNPKSLVT 308 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~ 308 (491)
||..+|++|||+.+++.
T Consensus 234 ~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 234 CFQKDPNLRPTAKQLLK 250 (254)
T ss_pred HHhCChhhCcCHHHHhc
Confidence 99999999999999985
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=288.10 Aligned_cols=238 Identities=20% Similarity=0.211 Sum_probs=187.8
Q ss_pred CCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC---ChhHHHHHHHH---HhccCCCCcceEEeEeecCCeeEEEEecCCC
Q 011184 65 HGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP---DPRQFLEEARS---VGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 137 (491)
Q Consensus 65 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~---l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~ 137 (491)
||+|+||.||++.. .+++.||+|.+...... ....+..|..+ ++...||||+.+++++...+..++||||++|
T Consensus 2 ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g 81 (278)
T cd05606 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNG 81 (278)
T ss_pred cccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCCC
Confidence 69999999999994 56899999998653322 12234444443 4445799999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC--CCccccC
Q 011184 138 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSYSTN 215 (491)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--~~~~~~t 215 (491)
++|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++..... .....|+
T Consensus 82 ~~L~~~l~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 158 (278)
T cd05606 82 GDLHYHLSQ--HGVFSEAEMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT 158 (278)
T ss_pred CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCC
Confidence 999998863 457999999999999999999999998 99999999999999999999999999875432 2244688
Q ss_pred CCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhcc
Q 011184 216 LAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 294 (491)
Q Consensus 216 ~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 294 (491)
..|+|||.+.++ .++.++||||+|+++|+|++|+.|+........... .... .......+...+..+.+++.+||.
T Consensus 159 ~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~--~~~~-~~~~~~~~~~~s~~~~~li~~~l~ 235 (278)
T cd05606 159 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI--DRMT-LTMAVELPDSFSPELRSLLEGLLQ 235 (278)
T ss_pred cCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHH--HHHh-hccCCCCCCcCCHHHHHHHHHHhh
Confidence 999999998754 589999999999999999999988865421110000 0000 011123344567899999999999
Q ss_pred CCCCCCC-----ChhHHHH
Q 011184 295 YEPRERP-----NPKSLVT 308 (491)
Q Consensus 295 ~dp~~Rp-----s~~~il~ 308 (491)
.+|.+|| ++.++++
T Consensus 236 ~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 236 RDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred cCHHhccCCCCCCHHHHHh
Confidence 9999999 8999986
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=286.95 Aligned_cols=242 Identities=19% Similarity=0.218 Sum_probs=195.4
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC-----CCChhHHHHHHHHHhccCCCCcceEEeEeecC--CeeEE
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA-----WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLL 130 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--~~~~l 130 (491)
+++.+.||+|++|.||++.. .++..||+|.+.... ......+.+|++++++++||||+++++++... +..++
T Consensus 4 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (264)
T cd06653 4 WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSI 83 (264)
T ss_pred eeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEE
Confidence 44556779999999999994 568999999875321 11235788999999999999999999998764 45889
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC--
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-- 208 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 208 (491)
|+||+++++|.+++.. ...+++.....++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 84 v~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 160 (264)
T cd06653 84 FVEYMPGGSIKDQLKA--YGALTENVTRRYTRQILQGVSYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRIQTIC 160 (264)
T ss_pred EEEeCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEECcccccccccccc
Confidence 9999999999999863 346889999999999999999999999 99999999999999999999999999875432
Q ss_pred -----CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHH
Q 011184 209 -----GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 283 (491)
Q Consensus 209 -----~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (491)
.....++..|+|||.+.+..++.++|+||||+++++|++|+.|+......... ...........++...+.
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~~~p~~~~~ 236 (264)
T cd06653 161 MSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAI----FKIATQPTKPMLPDGVSD 236 (264)
T ss_pred ccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHH----HHHHcCCCCCCCCcccCH
Confidence 12345788999999999888999999999999999999999887543211111 111111122345667788
Q ss_pred HHHHHHHHhccCCCCCCCChhHHHH
Q 011184 284 ELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 284 ~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.+.+++.+||. +|..||++.+++.
T Consensus 237 ~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 237 ACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred HHHHHHHHHhc-CcccCccHHHHhc
Confidence 99999999999 5799999998876
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-37 Score=292.35 Aligned_cols=248 Identities=19% Similarity=0.282 Sum_probs=194.5
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
+++++.||.|++|.||+|+. .+|..||||+++..... ....+.+|++++++++||||+++++++...+..++||||++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 81 (284)
T cd07836 2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMD 81 (284)
T ss_pred ceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCC
Confidence 45677889999999999995 46899999999754432 34567889999999999999999999999999999999998
Q ss_pred CCCHHHHhcccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----Cc
Q 011184 137 NETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 211 (491)
Q Consensus 137 ~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 211 (491)
++|.+++.... ...+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++...... ..
T Consensus 82 -~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 159 (284)
T cd07836 82 -KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR-VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSN 159 (284)
T ss_pred -ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccccc
Confidence 58888876432 246899999999999999999999999 999999999999999999999999998654322 23
Q ss_pred cccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccc-----------ccc-cccc----
Q 011184 212 YSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM-----------LTD-SCLE---- 274 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~-----------~~~-~~~~---- 274 (491)
..++..|++||.+.+. .++.++||||||+++|+|++|..|+............... +.. +...
T Consensus 160 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd07836 160 EVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFP 239 (284)
T ss_pred ccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhccccc
Confidence 3467889999988664 4688999999999999999999887544322111100000 000 0000
Q ss_pred -------CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 275 -------GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 275 -------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
....+..+..+.+++.+||+.||.+||++.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 240 RYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred CCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0111234578899999999999999999999986
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-37 Score=293.14 Aligned_cols=248 Identities=19% Similarity=0.230 Sum_probs=190.7
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccC-CCCcceEEeEeecCCe-----eE
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDE-----RL 129 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~-----~~ 129 (491)
++++..||.|+||.||+|.. .+++.||||.+...... ....+.+|+.+++.++ ||||+++++++...+. .+
T Consensus 3 y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~ 82 (295)
T cd07837 3 YEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLY 82 (295)
T ss_pred ceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEE
Confidence 45667779999999999995 46899999998654322 2457889999999995 6999999999887665 89
Q ss_pred EEEecCCCCCHHHHhcccC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC-CCCeEEccCCCccc
Q 011184 130 LVAEYMPNETLAKHLFHWE---THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKN 205 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla~~ 205 (491)
+||||+++ +|.+++.... ...+++..++.++.||+.||.|||+.+ ++||||+|+||+++. ++.+||+|||++..
T Consensus 83 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~-i~H~dl~~~nil~~~~~~~~kl~dfg~~~~ 160 (295)
T cd07837 83 LVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG-VMHRDLKPQNLLVDKQKGLLKIADLGLGRA 160 (295)
T ss_pred EEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChHHEEEecCCCeEEEeeccccee
Confidence 99999984 8888875422 246899999999999999999999998 999999999999998 89999999999875
Q ss_pred CCCC----CccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccccccc----------
Q 011184 206 SRDG----KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD---------- 270 (491)
Q Consensus 206 ~~~~----~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~---------- 270 (491)
.... ....+++.|+|||.+.+ ..++.++||||||+++|+|++|..|+...............+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T cd07837 161 FSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVS 240 (295)
T ss_pred cCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchh
Confidence 4321 22345788999998865 44789999999999999999999887654221111000000000
Q ss_pred ------------ccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 271 ------------SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 271 ------------~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
+..........+.++.++|.+||..||.+||++.+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 241 KLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred hccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00000111235678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-37 Score=296.61 Aligned_cols=248 Identities=17% Similarity=0.240 Sum_probs=190.9
Q ss_pred ccccccCCCCCccEEEEEEEC---CCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecC--CeeEE
Q 011184 59 ENIVSEHGEKAPNVVYKGKLE---NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLL 130 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--~~~~l 130 (491)
+++++.||+|++|.||+|... ++..||+|.+.... ......+.+|+.+++.++||||+++++++... +..++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 81 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL 81 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence 456678899999999999953 47899999997633 23346788999999999999999999999988 78999
Q ss_pred EEecCCCCCHHHHhcccC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC----CCCeEEccCCCc
Q 011184 131 VAEYMPNETLAKHLFHWE---THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE----DGNPRLSTFGLM 203 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~----~~~~kl~Dfgla 203 (491)
||||++ ++|.+.+.... ...+++..++.++.||+.||.|||+.+ ++||||||+||+++. ++.+||+|||++
T Consensus 82 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 82 LFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW-VLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC-EeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 999997 56766664221 236889999999999999999999999 999999999999999 999999999998
Q ss_pred ccCCCC-------CccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhH----------hhh---
Q 011184 204 KNSRDG-------KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDL----------IRD--- 262 (491)
Q Consensus 204 ~~~~~~-------~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~----------~~~--- 262 (491)
...... ....++..|+|||.+.+. .++.++||||||+++++|++|+.|+....... +..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (316)
T cd07842 160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFE 239 (316)
T ss_pred cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHH
Confidence 764322 223567889999988764 47899999999999999999998875432211 000
Q ss_pred ----------------ccccccccccccCCCC-----------chhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 263 ----------------RNLQMLTDSCLEGQFT-----------DDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 263 ----------------~~~~~~~~~~~~~~~~-----------~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
..............++ ...+..+.+++.+||+.||++|||+.+++.
T Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 240 VLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000000000000111 134467899999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-37 Score=292.37 Aligned_cols=246 Identities=22% Similarity=0.311 Sum_probs=196.5
Q ss_pred cccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 60 NIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
++++.||.|++|.||++.. .+++.+++|.+...... ....+.+|++++++++|+||+++++++..++..++||||++
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 81 (283)
T cd05118 2 QKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMD 81 (283)
T ss_pred ccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccC
Confidence 4567889999999999995 46899999998754432 34678899999999999999999999999999999999997
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC----cc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SY 212 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~~ 212 (491)
++|.+++... ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||.+....... ..
T Consensus 82 -~~l~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~ 158 (283)
T cd05118 82 -TDLYKLIKDR-QRGLPESLIKSYLYQLLQGLAFCHSHG-ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHY 158 (283)
T ss_pred -CCHHHHHHhh-cccCCHHHHHHHHHHHHHHHHHHHHCC-eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCc
Confidence 5888888642 357899999999999999999999999 9999999999999999999999999887654332 23
Q ss_pred ccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccc-----------ccc----------
Q 011184 213 STNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM-----------LTD---------- 270 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~-----------~~~---------- 270 (491)
.++..|+|||.+.+. .++.++|+||||+++|+|++|+.|++.............. ...
T Consensus 159 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd05118 159 VVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFP 238 (283)
T ss_pred cCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhc
Confidence 467789999998876 6899999999999999999999887654321110000000 000
Q ss_pred ---ccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 271 ---SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 271 ---~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
...........+.++.+++.+||+.||.+||++.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 239 KKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred cccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 00001112345678999999999999999999999986
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=297.18 Aligned_cols=246 Identities=21% Similarity=0.290 Sum_probs=190.5
Q ss_pred ccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCC--CCChhHHHHHHHHHhcc-CCCCcceEEeEeecC--CeeEEEE
Q 011184 59 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA--WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEG--DERLLVA 132 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~--~~~~lv~ 132 (491)
+.+...+|.|+||.||+|... +++.+|||++.... ......+.+|+.+++++ +||||++++++|... ...++||
T Consensus 9 y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~ 88 (337)
T cd07852 9 YEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVF 88 (337)
T ss_pred HHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEe
Confidence 455677799999999999954 58899999985422 22345677899999999 999999999998654 3689999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC---
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 209 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 209 (491)
||++ ++|..++.. ..+++..+..++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++......
T Consensus 89 e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~-i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~ 163 (337)
T cd07852 89 EYME-TDLHAVIRA---NILEDVHKRYIMYQLLKALKYIHSGN-VIHRDLKPSNILLNSDCRVKLADFGLARSLSELEEN 163 (337)
T ss_pred cccc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEEeeccchhcccccccc
Confidence 9997 699998853 37889999999999999999999998 999999999999999999999999998754322
Q ss_pred ------CccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcc------------------
Q 011184 210 ------KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN------------------ 264 (491)
Q Consensus 210 ------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~------------------ 264 (491)
....++..|+|||.+.+ ..++.++||||||+++|+|++|+.|+............
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (337)
T cd07852 164 PENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSP 243 (337)
T ss_pred ccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhh
Confidence 12357888999998765 45788999999999999999999887643211100000
Q ss_pred -----ccccc--cccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 265 -----LQMLT--DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 265 -----~~~~~--~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
..... ............+.++.+++.+||+.||.+|||+.+++..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 244 FAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred hHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00000 0000011122356789999999999999999999999973
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-37 Score=298.78 Aligned_cols=247 Identities=17% Similarity=0.259 Sum_probs=193.3
Q ss_pred ccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCC--CCChhHHHHHHHHHhccCCCCcceEEeEeecC-----CeeEE
Q 011184 59 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG-----DERLL 130 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~-----~~~~l 130 (491)
+.++..||.|+||+||++. ..++..||||.+.... ......+.+|+.+++.++||||+++++++... ...++
T Consensus 7 y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~l 86 (337)
T cd07858 7 YVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYI 86 (337)
T ss_pred eeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEE
Confidence 5566778999999999999 4568999999986532 22345678899999999999999999988654 34799
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 209 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 209 (491)
|+||+. ++|.+++.. ...+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++......
T Consensus 87 v~e~~~-~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~ 162 (337)
T cd07858 87 VYELMD-TDLHQIIRS--SQTLSDDHCQYFLYQLLRGLKYIHSAN-VLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG 162 (337)
T ss_pred EEeCCC-CCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEECcCccccccCCCc
Confidence 999996 789888863 457999999999999999999999998 999999999999999999999999998765433
Q ss_pred ---CccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhh-------------------ccc-
Q 011184 210 ---KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD-------------------RNL- 265 (491)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~-------------------~~~- 265 (491)
....++..|+|||.+.. ..++.++||||||+++|+|++|+.||.......... ...
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (337)
T cd07858 163 DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKAR 242 (337)
T ss_pred ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhh
Confidence 23457788999998865 458899999999999999999998876432110000 000
Q ss_pred ---cccccc--cccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 266 ---QMLTDS--CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 266 ---~~~~~~--~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
...... ..........+.++.+++.+||+.+|++|||+++++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 243 RYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred HHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 000000 00001123466789999999999999999999999985
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=294.56 Aligned_cols=239 Identities=21% Similarity=0.247 Sum_probs=185.6
Q ss_pred CccEEEEEE-ECCCCEEEEEEeCCC--CCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCCHHHHhc
Q 011184 69 APNVVYKGK-LENQRRIAVKRFNRM--AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLF 145 (491)
Q Consensus 69 ~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 145 (491)
++|.||.+. ..+++.||||+++.. .......+.+|+++++.++||||+++++++...+..+++|||+++++|.+++.
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~ 91 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLK 91 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHH
Confidence 345555555 336899999998754 22345679999999999999999999999999999999999999999999997
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-----------Ccccc
Q 011184 146 HWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----------KSYST 214 (491)
Q Consensus 146 ~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----------~~~~~ 214 (491)
......+++..+..++.|++.||.|||+++ |+||||||+||+++.++.++|+|||.+...... ....+
T Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~-ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (314)
T cd08216 92 THFPEGLPELAIAFILKDVLNALDYIHSKG-FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVK 170 (314)
T ss_pred HhcccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccc
Confidence 544456889999999999999999999998 999999999999999999999999987643211 12345
Q ss_pred CCCCCCcccccCC--CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhh-hc---cccccc-------------------
Q 011184 215 NLAFTPPEYLRTG--RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR-DR---NLQMLT------------------- 269 (491)
Q Consensus 215 t~~y~aPE~~~~~--~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~-~~---~~~~~~------------------- 269 (491)
+..|+|||.+.+. .++.++|||||||++|+|++|..||......... .. ....+.
T Consensus 171 ~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (314)
T cd08216 171 NLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSN 250 (314)
T ss_pred cccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccc
Confidence 6789999998763 4788999999999999999999887643211100 00 000000
Q ss_pred -----cccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 270 -----DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 270 -----~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
............+.++.+++.+||..||++|||+.++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 251 EHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred cccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 000011122345678999999999999999999999998
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=328.46 Aligned_cols=258 Identities=19% Similarity=0.231 Sum_probs=204.4
Q ss_pred CHHHHHHHhcCCcc-ccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCC--CCChhHHHHHHHHHhccCCCCcceEEe
Q 011184 45 TLEQLKNATSGFAV-ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLG 120 (491)
Q Consensus 45 ~~~~~~~~~~~~~~-~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~~~~ 120 (491)
.+..+.....+.+. ..-...||.|.||.||-|. .++|...|+|.++... ........+|..+|..+.|||+|+++|
T Consensus 1222 y~~kla~~lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyG 1301 (1509)
T KOG4645|consen 1222 YLNKLASSLSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYG 1301 (1509)
T ss_pred HHHHHHHHhccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCc
Confidence 34444444444321 2223466999999999999 7789999999986432 233567889999999999999999999
Q ss_pred EeecCCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccC
Q 011184 121 CCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 200 (491)
Q Consensus 121 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 200 (491)
+-.+.+..+|.||||.+|+|.+.+.+ ++..++.....+..|++.|+.|||++| ||||||||+||+++.+|.+|++||
T Consensus 1302 VEvHRekv~IFMEyC~~GsLa~ll~~--gri~dE~vt~vyt~qll~gla~LH~~g-IVHRDIK~aNI~Ld~~g~iK~~DF 1378 (1509)
T KOG4645|consen 1302 VEVHREKVYIFMEYCEGGSLASLLEH--GRIEDEMVTRVYTKQLLEGLAYLHEHG-IVHRDIKPANILLDFNGLIKYGDF 1378 (1509)
T ss_pred eeecHHHHHHHHHHhccCcHHHHHHh--cchhhhhHHHHHHHHHHHHHHHHHhcC-ceecCCCccceeeecCCcEEeecc
Confidence 99999999999999999999999974 445667777788999999999999999 999999999999999999999999
Q ss_pred CCcccCCCC--------CccccCCCCCCcccccCCC---CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccc
Q 011184 201 GLMKNSRDG--------KSYSTNLAFTPPEYLRTGR---VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 269 (491)
Q Consensus 201 gla~~~~~~--------~~~~~t~~y~aPE~~~~~~---~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~ 269 (491)
|.|...... +.+.||+.|||||++.+.. ...+.||||+|||++||+||+.|+..-... +. ++.. .
T Consensus 1379 Gsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne-~a--IMy~-V 1454 (1509)
T KOG4645|consen 1379 GSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE-WA--IMYH-V 1454 (1509)
T ss_pred cceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch-hH--HHhH-H
Confidence 998765433 2457899999999998644 567999999999999999999987432111 10 0011 1
Q ss_pred cccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 270 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
.....+.+|..++.+-.+|+..||..||+.|.++.++++.
T Consensus 1455 ~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1455 AAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred hccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 1112345667788999999999999999999999988874
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=275.20 Aligned_cols=248 Identities=15% Similarity=0.158 Sum_probs=199.4
Q ss_pred hcCCccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCCChhHHHHHHHHHhcc-CCCCcceEEeEeecC----C
Q 011184 53 TSGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEG----D 126 (491)
Q Consensus 53 ~~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~----~ 126 (491)
+.+|.... .+||-|-.|.|-.+. ..+|+.+|+|++.. .....+|+++.-.. .|||||.+++++.+. .
T Consensus 60 tedY~is~--qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rk 132 (400)
T KOG0604|consen 60 TEDYSISW--QVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYENSYQGRK 132 (400)
T ss_pred hhhheehh--hhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCce
Confidence 34444433 567999999999999 45699999999853 34567899887776 699999999998653 4
Q ss_pred eeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC---CCCeEEccCCCc
Q 011184 127 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLM 203 (491)
Q Consensus 127 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla 203 (491)
.+.+|||.|+||.|.+.+..+....+++.++..|+.||+.|+.|||+.+ |.||||||+|+|.+. +-.+||+|||+|
T Consensus 133 cLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n-IAHRDlKpENLLyt~t~~na~lKLtDfGFA 211 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN-IAHRDLKPENLLYTTTSPNAPLKLTDFGFA 211 (400)
T ss_pred eeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc-hhhccCChhheeeecCCCCcceEecccccc
Confidence 5789999999999999999877788999999999999999999999999 999999999999964 456999999999
Q ss_pred ccCCCC---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccc--cccCCCC
Q 011184 204 KNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS--CLEGQFT 278 (491)
Q Consensus 204 ~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 278 (491)
+..... .+-+.|+.|.|||++...+|+..+|+||+||++|-|++|.+||.......+..+....+... ..+..-+
T Consensus 212 K~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEW 291 (400)
T KOG0604|consen 212 KETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEW 291 (400)
T ss_pred cccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhH
Confidence 986543 34467899999999998899999999999999999999999986543222221111111111 1112223
Q ss_pred chhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 279 DDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 279 ~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
...++...++|+.+|..+|.+|.|+.+++.
T Consensus 292 s~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 292 SCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred hHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 467889999999999999999999999987
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-38 Score=280.60 Aligned_cols=236 Identities=20% Similarity=0.240 Sum_probs=200.8
Q ss_pred ccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCC---ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
.+...++.||+|.||.|-+++ ..+++.+|||++++...- ....-+.|-++|+..+||.+..+.-.|+..+.+|+||
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM 247 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM 247 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence 344556777999999999999 667999999999865432 2445778999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccC----CC
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS----RD 208 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~----~~ 208 (491)
||..||.|.-+|.+ ...+++...+.+...|+.||.|||+.+ ||.||||.+|.|+|.+|.+||+|||+++.. ..
T Consensus 248 eyanGGeLf~HLsr--er~FsE~RtRFYGaEIvsAL~YLHs~~-ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t 324 (516)
T KOG0690|consen 248 EYANGGELFFHLSR--ERVFSEDRTRFYGAEIVSALGYLHSRN-IVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDT 324 (516)
T ss_pred EEccCceEeeehhh--hhcccchhhhhhhHHHHHHhhhhhhCC-eeeeechhhhheeccCCceEeeecccchhcccccce
Confidence 99999999988863 467899999999999999999999998 999999999999999999999999998753 23
Q ss_pred CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHH
Q 011184 209 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 288 (491)
Q Consensus 209 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (491)
..+++||+.|+|||++....|+.+.|.|.+|||+|||++|+.||....-..+-.-++.. .-.+|..++++...|
T Consensus 325 ~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~e------d~kFPr~ls~eAktL 398 (516)
T KOG0690|consen 325 TKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILME------DLKFPRTLSPEAKTL 398 (516)
T ss_pred eccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhh------hccCCccCCHHHHHH
Confidence 46789999999999999999999999999999999999999998754332222211111 225677888999999
Q ss_pred HHHhccCCCCCCC
Q 011184 289 ASRCLQYEPRERP 301 (491)
Q Consensus 289 i~~cl~~dp~~Rp 301 (491)
+..+|.+||.+|.
T Consensus 399 LsGLL~kdP~kRL 411 (516)
T KOG0690|consen 399 LSGLLKKDPKKRL 411 (516)
T ss_pred HHHHhhcChHhhc
Confidence 9999999999994
|
|
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=284.70 Aligned_cols=245 Identities=18% Similarity=0.247 Sum_probs=201.6
Q ss_pred ccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 59 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
++++..+|.|++|.||++. ..++..+++|.+...... ....+.+|+++++.++|+||+++++++......++||||+
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd08530 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYA 81 (256)
T ss_pred ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhc
Confidence 4566778999999999998 446889999998754322 2456788999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC--Cc
Q 011184 136 PNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KS 211 (491)
Q Consensus 136 ~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~~ 211 (491)
++++|.+++.... ...+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++...... ..
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~-i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~ 160 (256)
T cd08530 82 PFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK-ILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKT 160 (256)
T ss_pred CCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCcceEEEecCCcEEEeeccchhhhccCCccc
Confidence 9999999886421 356889999999999999999999999 999999999999999999999999998765433 22
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
..++..|++||.+.+..++.++|+||||+++++|++|+.|+............... .....+...+.++.+++.+
T Consensus 161 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~ 235 (256)
T cd08530 161 QIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRG-----KYPPIPPIYSQDLQNFIRS 235 (256)
T ss_pred ccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-----CCCCCchhhCHHHHHHHHH
Confidence 34678999999999888999999999999999999999888654433222211111 1122334567889999999
Q ss_pred hccCCCCCCCChhHHHHH
Q 011184 292 CLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~~ 309 (491)
||+.+|++||++.++++.
T Consensus 236 ~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 236 MLQVKPKLRPNCDKILAS 253 (256)
T ss_pred HcCCCcccCCCHHHHhcC
Confidence 999999999999999873
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=297.56 Aligned_cols=247 Identities=20% Similarity=0.315 Sum_probs=197.5
Q ss_pred ccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCC--CCChhHHHHHHHHHhccCCCCcceEEeEeecCC-----eeEE
Q 011184 59 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD-----ERLL 130 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~-----~~~l 130 (491)
+++...||.|++|.||++... ++..||||++.... ....+.+.+|+.+++.++||||+++++++...+ ..++
T Consensus 2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~l 81 (330)
T cd07834 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYI 81 (330)
T ss_pred ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEE
Confidence 456677899999999999954 58999999987543 233567899999999999999999999988775 7899
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 210 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 210 (491)
||||++ ++|.+++.. ..++++..++.++.||+.||.|||+.+ ++||||||+|||++.++.++|+|||++.......
T Consensus 82 v~e~~~-~~l~~~l~~--~~~l~~~~~~~i~~~l~~~l~~LH~~g-i~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~ 157 (330)
T cd07834 82 VTELME-TDLHKVIKS--PQPLTDDHIQYFLYQILRGLKYLHSAN-VIHRDLKPSNILVNSNCDLKICDFGLARGVDPDE 157 (330)
T ss_pred Eecchh-hhHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEcccCceEeecccc
Confidence 999997 689888863 347999999999999999999999999 9999999999999999999999999987654332
Q ss_pred -------ccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccc-------------
Q 011184 211 -------SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT------------- 269 (491)
Q Consensus 211 -------~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~------------- 269 (491)
...++..|+|||.+.+. .++.++|+||||+++++|++|..||.................
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 237 (330)
T cd07834 158 DEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSE 237 (330)
T ss_pred cccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhcccc
Confidence 33567889999999887 789999999999999999999988865432211111000000
Q ss_pred ------c------ccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 270 ------D------SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 270 ------~------~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
. ...........+..+.+++.+||+.+|.+||++++++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 238 KARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred chhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0 000011123356789999999999999999999999973
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=297.10 Aligned_cols=246 Identities=17% Similarity=0.273 Sum_probs=191.7
Q ss_pred ccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCC--CChhHHHHHHHHHhccCCCCcceEEeEeec----CCeeEEE
Q 011184 59 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCE----GDERLLV 131 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~~~~~~~~----~~~~~lv 131 (491)
+.+...||.|++|.||++. ..+|..||+|++..... .....+.+|+.++++++||||+++++++.. ....++|
T Consensus 7 y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 86 (334)
T cd07855 7 YKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVV 86 (334)
T ss_pred eeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEE
Confidence 4555677999999999999 45699999999875432 234567889999999999999999998753 3568999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC--
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 209 (491)
|||+. ++|.+++.. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 87 ~e~~~-~~l~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 162 (334)
T cd07855 87 MDLME-SDLHHIIHS--DQPLTEEHIRYFLYQLLRGLKYIHSAN-VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPT 162 (334)
T ss_pred Eehhh-hhHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEecccccceeecccCc
Confidence 99996 689998863 456899999999999999999999998 999999999999999999999999998654321
Q ss_pred ------CccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhh-------------------c
Q 011184 210 ------KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD-------------------R 263 (491)
Q Consensus 210 ------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~-------------------~ 263 (491)
....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||.......... .
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 242 (334)
T cd07855 163 EHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSD 242 (334)
T ss_pred CCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchh
Confidence 12357788999999865 458899999999999999999999886542211000 0
Q ss_pred cccccccc-ccc-----CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 264 NLQMLTDS-CLE-----GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 264 ~~~~~~~~-~~~-----~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
........ ... .......+.++.+++.+||+.+|.+|||+.+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 243 RVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred hHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 00000000 000 0112335678999999999999999999999988
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-36 Score=334.05 Aligned_cols=255 Identities=25% Similarity=0.414 Sum_probs=198.4
Q ss_pred cCHHHHHHHhcCCccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEe
Q 011184 44 FTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCC 122 (491)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~ 122 (491)
++.+++. ..+...+ .+|+|+||.||+|.. .++..||||++..... ....|++.+++++|||||+++++|
T Consensus 683 ~~~~~~~---~~~~~~~---~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~ 752 (968)
T PLN00113 683 ITINDIL---SSLKEEN---VISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLC 752 (968)
T ss_pred hhHHHHH---hhCCccc---EEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEE
Confidence 4444443 3344444 459999999999995 5789999999864332 223568999999999999999999
Q ss_pred ecCCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcccccccccceeeCCCCCeEEcc
Q 011184 123 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT---SKGRALYHDLNAYRILFDEDGNPRLST 199 (491)
Q Consensus 123 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~~iiH~Dlkp~Nill~~~~~~kl~D 199 (491)
..++..++||||+++|+|.+++. .++|..+.+++.||+.||.||| +.+ |+||||||+||+++.++.+++.
T Consensus 753 ~~~~~~~lv~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~-iiH~dlkp~Nil~~~~~~~~~~- 825 (968)
T PLN00113 753 RSEKGAYLIHEYIEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPA-VVVGNLSPEKIIIDGKDEPHLR- 825 (968)
T ss_pred EcCCCCEEEEeCCCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCC-eecCCCCHHhEEECCCCceEEE-
Confidence 99999999999999999999994 3889999999999999999999 556 9999999999999998888875
Q ss_pred CCCcccCCCCCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchh-----hHhh-----hccccccc
Q 011184 200 FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-----DLIR-----DRNLQMLT 269 (491)
Q Consensus 200 fgla~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~-----~~~~-----~~~~~~~~ 269 (491)
||............+|+.|+|||++.+..++.++|||||||++|||+||+.|+..... ..+. ......+.
T Consensus 826 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 905 (968)
T PLN00113 826 LSLPGLLCTDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWI 905 (968)
T ss_pred eccccccccCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhhee
Confidence 6665544334445678999999999988899999999999999999999988743211 0010 01111122
Q ss_pred cccccC--CCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 270 DSCLEG--QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 270 ~~~~~~--~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
++.... ..+.....++.+++.+||+.||++|||+.++++.|+.+.+
T Consensus 906 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 906 DPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred CccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 222211 1233445678899999999999999999999999988765
|
|
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=289.66 Aligned_cols=245 Identities=18% Similarity=0.254 Sum_probs=193.9
Q ss_pred ccccccCCCCCccEEEEEEE----CCCCEEEEEEeCCCCC----CChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeE
Q 011184 59 ENIVSEHGEKAPNVVYKGKL----ENQRRIAVKRFNRMAW----PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERL 129 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~ 129 (491)
+++.+.||.|+||.||++.. .+|..||+|+++.... ...+.+.+|+.++.++ +|+||+++++++..++..+
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH 81 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence 45667789999999999985 3688999999865321 2245688899999999 5999999999999999999
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 209 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 209 (491)
+||||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||+|+|||++.++.++|+|||++......
T Consensus 82 lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 158 (290)
T cd05613 82 LILDYINGGELFTHLSQ--RERFKEQEVQIYSGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFHED 158 (290)
T ss_pred EEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeEECCCCCEEEeeCccceecccc
Confidence 99999999999999864 356889999999999999999999998 999999999999999999999999998764332
Q ss_pred -----CccccCCCCCCcccccCC--CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhH
Q 011184 210 -----KSYSTNLAFTPPEYLRTG--RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 282 (491)
Q Consensus 210 -----~~~~~t~~y~aPE~~~~~--~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (491)
....++..|+|||.+.+. .++.++||||||+++|+|++|..|+...............+... ...++..++
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 236 (290)
T cd05613 159 EVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKS--EPPYPQEMS 236 (290)
T ss_pred cccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhcc--CCCCCccCC
Confidence 134578899999998753 46789999999999999999998875321110000001111111 112344567
Q ss_pred HHHHHHHHHhccCCCCCCC-----ChhHHHH
Q 011184 283 TELVRLASRCLQYEPRERP-----NPKSLVT 308 (491)
Q Consensus 283 ~~~~~li~~cl~~dp~~Rp-----s~~~il~ 308 (491)
..+.+++.+||+.||.+|| ++++++.
T Consensus 237 ~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 237 ALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 8899999999999999997 6677765
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-36 Score=287.58 Aligned_cols=247 Identities=21% Similarity=0.247 Sum_probs=192.7
Q ss_pred cccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCC--hhHHHHHHHHHhcc---CCCCcceEEeEeecCCe-----e
Q 011184 60 NIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD--PRQFLEEARSVGQL---RNNRLTNLLGCCCEGDE-----R 128 (491)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l---~H~niv~~~~~~~~~~~-----~ 128 (491)
+++..+|.|++|.||++... ++..||+|+++...... ...+.+|+.++.++ .||||+++++++...+. .
T Consensus 2 ~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~ 81 (287)
T cd07838 2 EELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKL 81 (287)
T ss_pred eEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCcee
Confidence 45677899999999999965 48999999997433222 34566788887766 59999999999988776 8
Q ss_pred EEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC
Q 011184 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 208 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 208 (491)
+++|||++ ++|.+++.......+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 ~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~-i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~ 159 (287)
T cd07838 82 TLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR-IVHRDLKPQNILVTSDGQVKIADFGLARIYSF 159 (287)
T ss_pred EEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCChhhEEEccCCCEEEeccCcceeccC
Confidence 99999997 58998886533446899999999999999999999998 99999999999999999999999999876543
Q ss_pred CC---ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccccc-----------------
Q 011184 209 GK---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML----------------- 268 (491)
Q Consensus 209 ~~---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~----------------- 268 (491)
.. ...++..|+|||.+.+..++.++|+||||+++|+|++|.+|+................
T Consensus 160 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (287)
T cd07838 160 EMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRS 239 (287)
T ss_pred CcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchh
Confidence 32 2346788999999998889999999999999999999987776543221111110000
Q ss_pred -ccc---cccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 269 -TDS---CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 269 -~~~---~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
... ..........+..+.+++.+||+.||.+||++.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 240 SFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred hcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 000 0001112245678899999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=291.03 Aligned_cols=250 Identities=18% Similarity=0.245 Sum_probs=197.0
Q ss_pred ccccccCCCCCccEEEEEEE----CCCCEEEEEEeCCCCC----CChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeE
Q 011184 59 ENIVSEHGEKAPNVVYKGKL----ENQRRIAVKRFNRMAW----PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERL 129 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~ 129 (491)
+++++.||.|++|.||++.. .++..||||+++.... .....+.+|+.++.++ +||||+++++.+..++..+
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~ 81 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH 81 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence 45667789999999999884 2468899999864321 2245688999999999 5999999999999999999
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 209 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 209 (491)
+||||+++++|.+++.. ...+++..+..++.|++.+|.|||+.+ ++||||+|+||+++.++.++|+|||++......
T Consensus 82 lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~-~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 158 (288)
T cd05583 82 LILDYVNGGELFTHLYQ--REHFTESEVRVYIAEIVLALDHLHQLG-IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE 158 (288)
T ss_pred EEEecCCCCcHHHHHhh--cCCcCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEEECccccccccc
Confidence 99999999999999863 356889999999999999999999998 999999999999999999999999998754332
Q ss_pred C-----ccccCCCCCCcccccCCC--CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhH
Q 011184 210 K-----SYSTNLAFTPPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 282 (491)
Q Consensus 210 ~-----~~~~t~~y~aPE~~~~~~--~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (491)
. ...++..|++||.+.+.. .+.++||||||+++++|++|..|+................... ....+..++
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 236 (288)
T cd05583 159 EEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS--KPPFPKTMS 236 (288)
T ss_pred cccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc--CCCCCcccC
Confidence 1 235788999999987655 7889999999999999999998875321110000000111111 112344466
Q ss_pred HHHHHHHHHhccCCCCCCCChhHHHHHhccc
Q 011184 283 TELVRLASRCLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 283 ~~~~~li~~cl~~dp~~Rps~~~il~~L~~~ 313 (491)
..+.+++.+||+.||++|||+.++.+.|+..
T Consensus 237 ~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 237 AEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred HHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 7899999999999999999988887766543
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-37 Score=252.62 Aligned_cols=247 Identities=20% Similarity=0.282 Sum_probs=198.9
Q ss_pred ccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 59 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
+...++||+|.+|+||+++ ..+++.||+|.+..+... -....++|+-+|+.++|.|||+++++...++..-+|+|||
T Consensus 4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c 83 (292)
T KOG0662|consen 4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83 (292)
T ss_pred hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh
Confidence 4455678999999999999 667899999998754422 2567899999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC----c
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----S 211 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~ 211 (491)
+ .+|..+... .++.++.+.+.+++.|+++||.++|+++ ++||||||.|.||+.+|.+|++|||+++-+.-.. .
T Consensus 84 d-qdlkkyfds-lng~~d~~~~rsfmlqllrgl~fchshn-vlhrdlkpqnllin~ngelkladfglarafgipvrcysa 160 (292)
T KOG0662|consen 84 D-QDLKKYFDS-LNGDLDPEIVRSFMLQLLRGLGFCHSHN-VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSA 160 (292)
T ss_pred h-HHHHHHHHh-cCCcCCHHHHHHHHHHHHhhhhhhhhhh-hhhccCCcceEEeccCCcEEecccchhhhcCCceEeeec
Confidence 6 888888864 4578999999999999999999999998 9999999999999999999999999998765432 3
Q ss_pred cccCCCCCCcccccCCC-CCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhcccc--------------ccccccccC
Q 011184 212 YSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQ--------------MLTDSCLEG 275 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~ 275 (491)
...|.-|.+|.++.+.+ |+...|+||.||++.|+.. |++.|++...+.....+.. .+.+..+.+
T Consensus 161 evvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp 240 (292)
T KOG0662|consen 161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYP 240 (292)
T ss_pred eeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccC
Confidence 35688999999999876 8999999999999999987 5556776644432222211 122222222
Q ss_pred CCCc---------hhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 276 QFTD---------DDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 276 ~~~~---------~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.++. .+...-++++++.|.-+|.+|.++++.++
T Consensus 241 ~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 241 IYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 2222 22344578999999999999999999887
|
|
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=296.21 Aligned_cols=258 Identities=17% Similarity=0.232 Sum_probs=195.7
Q ss_pred HHHHHHHhcC-CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeE
Q 011184 46 LEQLKNATSG-FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGC 121 (491)
Q Consensus 46 ~~~~~~~~~~-~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~ 121 (491)
.+++..++.. ...+.++..||.|++|.||+|+. .+|+.||||++...... ....+.+|+.+++.++||||++++++
T Consensus 3 ~~~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~ 82 (342)
T cd07879 3 REEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDV 82 (342)
T ss_pred hhhhhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhhe
Confidence 3444444422 23566778889999999999994 56899999998653221 23568899999999999999999999
Q ss_pred eecCC------eeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCe
Q 011184 122 CCEGD------ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP 195 (491)
Q Consensus 122 ~~~~~------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~ 195 (491)
+.... ..++|+||+. .+|..++ ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~-i~H~dlkp~NIll~~~~~~ 156 (342)
T cd07879 83 FTSAVSGDEFQDFYLVMPYMQ-TDLQKIM----GHPLSEDKVQYLVYQMLCGLKYIHSAG-IIHRDLKPGNLAVNEDCEL 156 (342)
T ss_pred ecccccCCCCceEEEEecccc-cCHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCE
Confidence 87543 4689999996 5787765 246899999999999999999999999 9999999999999999999
Q ss_pred EEccCCCcccCCCC-CccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccc-------
Q 011184 196 RLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ------- 266 (491)
Q Consensus 196 kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~------- 266 (491)
+|+|||+++..... ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||..............
T Consensus 157 kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 236 (342)
T cd07879 157 KILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGP 236 (342)
T ss_pred EEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 99999998765332 23456788999999876 4588999999999999999999998865432111000000
Q ss_pred ------------ccc---cccccC---CCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 267 ------------MLT---DSCLEG---QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 267 ------------~~~---~~~~~~---~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
... ...... ...+..+..+.+++.+||+.||.+||++.+++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h 297 (342)
T cd07879 237 EFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH 297 (342)
T ss_pred HHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000 000000 0012345678999999999999999999999863
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-36 Score=290.55 Aligned_cols=249 Identities=19% Similarity=0.241 Sum_probs=189.0
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecCC-------
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGD------- 126 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~------- 126 (491)
..+++++.||.|+||.||++.. .+++.||||.+...... ....+.+|+.++++++||||+++++++....
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 4567788889999999999995 46899999998643322 2345678999999999999999999987654
Q ss_pred -eeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCccc
Q 011184 127 -ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 205 (491)
Q Consensus 127 -~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 205 (491)
..++||||+. ++|.+.+.. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++..
T Consensus 92 ~~~~lv~e~~~-~~l~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 168 (310)
T cd07865 92 GSFYLVFEFCE-HDLAGLLSN-KNVKFTLSEIKKVMKMLLNGLYYIHRNK-ILHRDMKAANILITKDGILKLADFGLARA 168 (310)
T ss_pred ceEEEEEcCCC-cCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEECCCCcEEECcCCCccc
Confidence 3599999996 688888754 2346899999999999999999999998 99999999999999999999999999875
Q ss_pred CCCCC--------ccccCCCCCCcccccCCC-CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhh---c----cccccc
Q 011184 206 SRDGK--------SYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD---R----NLQMLT 269 (491)
Q Consensus 206 ~~~~~--------~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~---~----~~~~~~ 269 (491)
..... ...++..|+|||.+.+.. ++.++||||||+++|+|++|..|+.......... . ....+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (310)
T cd07865 169 FSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVW 248 (310)
T ss_pred ccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhc
Confidence 43221 234577899999887644 6889999999999999999998775442211000 0 000000
Q ss_pred cc----------cccCC---------CCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 270 DS----------CLEGQ---------FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 270 ~~----------~~~~~---------~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.. ..... .+...+..+.++|.+||..||.+|||+.++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 249 PGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred ccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 00 00000 00112356789999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=276.90 Aligned_cols=260 Identities=17% Similarity=0.260 Sum_probs=197.2
Q ss_pred ccccccccCCCCCccEEEEEEE-CC----CCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeec-CCee
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-EN----QRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCE-GDER 128 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~----~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~-~~~~ 128 (491)
..|++++.||+|++|.||+|.- .+ ...+|||+++..... -.....+|+.+++.++||||+.+..+|.. +..+
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 3578899999999999999973 22 237999999765322 24568899999999999999999999987 7889
Q ss_pred EEEEecCCCCCHHHHhccc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCC----CCeEEccCC
Q 011184 129 LLVAEYMPNETLAKHLFHW---ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED----GNPRLSTFG 201 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~----~~~kl~Dfg 201 (491)
++++||.+ -+|...++.. ..+.++...+.+|+.||+.|+.|||+.= |+||||||.||||..+ |++||+|||
T Consensus 104 ~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW-vlHRDLKPaNIlvmgdgperG~VKIaDlG 181 (438)
T KOG0666|consen 104 WLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW-VLHRDLKPANILVMGDGPERGRVKIADLG 181 (438)
T ss_pred EEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh-eeeccCCcceEEEeccCCccCeeEeeccc
Confidence 99999998 6888877643 2356889999999999999999999998 9999999999999877 999999999
Q ss_pred CcccCCCC-------CccccCCCCCCcccccCCC-CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhh---------cc
Q 011184 202 LMKNSRDG-------KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD---------RN 264 (491)
Q Consensus 202 la~~~~~~-------~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~---------~~ 264 (491)
+++.+.+. ...+.|.-|.|||++.|.. ||.+.|||+.|||..||+|-.+.|.+........ .+
T Consensus 182 laR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rI 261 (438)
T KOG0666|consen 182 LARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRI 261 (438)
T ss_pred HHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHH
Confidence 99876543 2345688999999999876 8999999999999999999987764432111000 00
Q ss_pred ccccccc---cc----------------cCCCCch------------hHHHHHHHHHHhccCCCCCCCChhHHHHHhccc
Q 011184 265 LQMLTDS---CL----------------EGQFTDD------------DGTELVRLASRCLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 265 ~~~~~~~---~~----------------~~~~~~~------------~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~ 313 (491)
+..+..+ .+ ......+ -++...+|+.++|..||.+|.|+++.++ ..+
T Consensus 262 f~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAle--h~y 339 (438)
T KOG0666|consen 262 FEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALE--HPY 339 (438)
T ss_pred HHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhc--ccc
Confidence 0000000 00 0000001 1244789999999999999999999998 344
Q ss_pred cccCCCC
Q 011184 314 QKETEVP 320 (491)
Q Consensus 314 ~~~~~~~ 320 (491)
+..-+.|
T Consensus 340 F~~d~lp 346 (438)
T KOG0666|consen 340 FTEDPLP 346 (438)
T ss_pred cccCCCC
Confidence 4443333
|
|
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=289.20 Aligned_cols=247 Identities=18% Similarity=0.307 Sum_probs=193.0
Q ss_pred cccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccC-CCCcceEEeEeecCCeeEEEEecCC
Q 011184 60 NIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
.++..||.|++|+||+|+.. +++.|+||++...... ......+|+..+.+++ ||||+++++++..++..++||||+
T Consensus 2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~- 80 (283)
T cd07830 2 KVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM- 80 (283)
T ss_pred eeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-
Confidence 45677899999999999964 5889999998654321 2334567999999998 999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC---Cccc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYS 213 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~ 213 (491)
+++|.+++.......+++..+..++.|++.+|.|||+++ ++|+||+|+||+++.++.++|+|||++...... ....
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~-i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 159 (283)
T cd07830 81 EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG-FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYV 159 (283)
T ss_pred CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCCC
Confidence 789999887543357899999999999999999999998 999999999999999999999999998765432 2345
Q ss_pred cCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcc---------------------ccccccc
Q 011184 214 TNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN---------------------LQMLTDS 271 (491)
Q Consensus 214 ~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~---------------------~~~~~~~ 271 (491)
++..|+|||.+.+ ..++.++|+||||+++++|++|+.|++........... .......
T Consensus 160 ~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (283)
T cd07830 160 STRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQ 239 (283)
T ss_pred CcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccc
Confidence 6888999998854 44789999999999999999999887544221110000 0000000
Q ss_pred ccc---CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 272 CLE---GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 272 ~~~---~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
... .......+..+.+++.+||+.+|++|||+++++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 240 FAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred cccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 000 0011122578999999999999999999999986
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=296.13 Aligned_cols=246 Identities=17% Similarity=0.217 Sum_probs=190.6
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecC-----------
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG----------- 125 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~----------- 125 (491)
.+.+++.||.|+||.||+|.. .+|..||+|++........+.+.+|+++++.++||||+++++++...
T Consensus 6 ~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 85 (342)
T cd07854 6 RYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSL 85 (342)
T ss_pred ceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccc
Confidence 466777889999999999994 56899999998765555567789999999999999999999876543
Q ss_pred ---CeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeC-CCCCeEEccCC
Q 011184 126 ---DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFG 201 (491)
Q Consensus 126 ---~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfg 201 (491)
...++||||++ ++|.+++. ...+++..+..++.||+.||.|||+.+ ++||||||+||+++ .++.++|+|||
T Consensus 86 ~~~~~~~lv~e~~~-~~L~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivH~dikp~Nili~~~~~~~kl~dfg 160 (342)
T cd07854 86 TELNSVYIVQEYME-TDLANVLE---QGPLSEEHARLFMYQLLRGLKYIHSAN-VLHRDLKPANVFINTEDLVLKIGDFG 160 (342)
T ss_pred cccceEEEEeeccc-ccHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEcCCCceEEECCcc
Confidence 35789999997 68988884 356899999999999999999999999 99999999999997 45678999999
Q ss_pred CcccCCCC-------CccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccc------
Q 011184 202 LMKNSRDG-------KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM------ 267 (491)
Q Consensus 202 la~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~------ 267 (491)
++...... ....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||...............
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 240 (342)
T cd07854 161 LARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVRE 240 (342)
T ss_pred cceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 98754321 12246778999998754 45788999999999999999999888543211110000000
Q ss_pred ---------c----c-----cccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 268 ---------L----T-----DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 268 ---------~----~-----~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
. . .......+....+.++.+++.+||+.||.+|||+.+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 241 EDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred HHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 0 0 000000112235578999999999999999999999987
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-36 Score=288.63 Aligned_cols=248 Identities=20% Similarity=0.287 Sum_probs=192.2
Q ss_pred CccccccccCCCCCccEEEEEEECC-CCEEEEEEeCCCCCC-ChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLEN-QRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~ 132 (491)
+..+.++..+|.|++|.||++...+ ++.||||.++..... ....+..|+.++... .||||+++++++..+...++||
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 4456777888999999999999654 899999999754322 234567788777766 5999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 210 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 210 (491)
||+. ++|.+++.. ....+++..+..++.|++.||.|||+ .+ ++||||+|+||++++++.++|+|||++.......
T Consensus 94 e~~~-~~l~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~ 170 (296)
T cd06618 94 ELMS-TCLDKLLKR-IQGPIPEDILGKMTVAIVKALHYLKEKHG-VIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA 170 (296)
T ss_pred eccC-cCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhhCC-EecCCCcHHHEEEcCCCCEEECccccchhccCCCc
Confidence 9985 677776654 23578999999999999999999997 47 9999999999999999999999999987644322
Q ss_pred --ccccCCCCCCcccccCCC----CCCCccchhHHHHHHHHHhCCCCCCCchhh-HhhhccccccccccccCCCCchhHH
Q 011184 211 --SYSTNLAFTPPEYLRTGR----VTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLEGQFTDDDGT 283 (491)
Q Consensus 211 --~~~~t~~y~aPE~~~~~~----~~~~~Dv~slG~vl~elltg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (491)
...++..|+|||.+.+.. ++.++||||||+++|+|++|+.|+...... ........... .........+.
T Consensus 171 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 247 (296)
T cd06618 171 KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEP---PSLPPNEGFSP 247 (296)
T ss_pred ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCC---CCCCCCCCCCH
Confidence 234677899999987553 788999999999999999999887542111 01000011100 00011113567
Q ss_pred HHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 284 ELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 284 ~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
++.+++.+||..||.+||++.+++..
T Consensus 248 ~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 248 DFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred HHHHHHHHHccCChhhCCCHHHHhcC
Confidence 89999999999999999999999874
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-36 Score=289.29 Aligned_cols=248 Identities=21% Similarity=0.239 Sum_probs=190.1
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCC--CChhHHHHHHHHHhccCCCCcceEEeEeecCC--------
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD-------- 126 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~-------- 126 (491)
.+.+...+|.|++|.||+|... +|+.||||+++.... .....+.+|+++++.++||||+++++++....
T Consensus 8 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~ 87 (302)
T cd07864 8 KFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKD 87 (302)
T ss_pred hhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhcccc
Confidence 3455677799999999999964 588999999965432 23456788999999999999999999987654
Q ss_pred --eeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcc
Q 011184 127 --ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 204 (491)
Q Consensus 127 --~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 204 (491)
..++|+||+++ +|...+.. ....+++..+..++.||+.||.|||+.+ |+|+||||+||++++++.+||+|||++.
T Consensus 88 ~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-i~H~dl~p~nili~~~~~~kl~dfg~~~ 164 (302)
T cd07864 88 KGAFYLVFEYMDH-DLMGLLES-GLVHFSEDHIKSFMKQLLEGLNYCHKKN-FLHRDIKCSNILLNNKGQIKLADFGLAR 164 (302)
T ss_pred CCcEEEEEcccCc-cHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCcEEeCcccccc
Confidence 78999999985 77777753 2346899999999999999999999998 9999999999999999999999999987
Q ss_pred cCCCCC-----ccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHh----hhc---c----ccc
Q 011184 205 NSRDGK-----SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI----RDR---N----LQM 267 (491)
Q Consensus 205 ~~~~~~-----~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~----~~~---~----~~~ 267 (491)
...... ...++..|+|||.+.+. .++.++|||||||++++|++|+.|+........ ... . ...
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (302)
T cd07864 165 LYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPD 244 (302)
T ss_pred cccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccc
Confidence 654322 12346789999988653 478899999999999999999987754321110 000 0 000
Q ss_pred ccccc-------------ccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 268 LTDSC-------------LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 268 ~~~~~-------------~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
+.... .........+..+.+++.+||+.||.+||++.+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 245 VIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred ccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00000 000011234678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=288.26 Aligned_cols=242 Identities=21% Similarity=0.256 Sum_probs=198.8
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC---CChhHHHHHHHHHhccC-CCCcceEEeEeecCCeeEEEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~~lv~ 132 (491)
.|.+...||.|++|.||++.. .++..||+|++..... .....+.+|++++.+++ ||||+++++++..++..++||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 356667789999999999995 4689999999865322 12356888999999998 999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC--
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-- 210 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 210 (491)
||+++++|.+++.. ...+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~l~~--~~~l~~~~~~~i~~ql~~~l~~Lh~~~-~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~ 158 (280)
T cd05581 82 EYAPNGELLQYIRK--YGSLDEKCTRFYAAEILLALEYLHSKG-IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSP 158 (280)
T ss_pred cCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEecCCccccccCCcccc
Confidence 99999999999974 347999999999999999999999998 9999999999999999999999999887543221
Q ss_pred ----------------------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccccc
Q 011184 211 ----------------------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML 268 (491)
Q Consensus 211 ----------------------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~ 268 (491)
...++..|+|||.+.+..++.++||||||++++++++|..|+.............
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~--- 235 (280)
T cd05581 159 ESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKIL--- 235 (280)
T ss_pred ccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH---
Confidence 2245788999999988889999999999999999999998876443211111111
Q ss_pred ccccccCCCCchhHHHHHHHHHHhccCCCCCCCCh----hHHHH
Q 011184 269 TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP----KSLVT 308 (491)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~----~~il~ 308 (491)
.....++...++.+.+++.+||+.+|.+|||+ ++++.
T Consensus 236 ---~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 236 ---KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred ---hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 01123344557889999999999999999999 77765
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=270.32 Aligned_cols=243 Identities=19% Similarity=0.199 Sum_probs=193.9
Q ss_pred ccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEEecCCCCCH
Q 011184 63 SEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPNETL 140 (491)
Q Consensus 63 ~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~gsL 140 (491)
..||+|+++.|--++ ..+|..+|||++.+.......+..+|++++.+. .|+||+.++++|+++..+|||||-|.||+|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl 163 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL 163 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence 356999999999999 788999999999877655677899999999999 599999999999999999999999999999
Q ss_pred HHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCC---eEEccCCCcccCC----------
Q 011184 141 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN---PRLSTFGLMKNSR---------- 207 (491)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~---~kl~Dfgla~~~~---------- 207 (491)
..++.. .+-+++.+..++..+|+.||.+||.+| |.||||||+|||-.+... +|||||.+..-..
T Consensus 164 LshI~~--~~~F~E~EAs~vvkdia~aLdFlH~kg-IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spast 240 (463)
T KOG0607|consen 164 LSHIQK--RKHFNEREASRVVKDIASALDFLHTKG-IAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPAST 240 (463)
T ss_pred HHHHHH--hhhccHHHHHHHHHHHHHHHHHHhhcC-cccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCC
Confidence 999974 567999999999999999999999999 999999999999965443 8999998864321
Q ss_pred -CCCccccCCCCCCccccc---C--CCCCCCccchhHHHHHHHHHhCCCCCCCchhhH--hhh---------cccccccc
Q 011184 208 -DGKSYSTNLAFTPPEYLR---T--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL--IRD---------RNLQMLTD 270 (491)
Q Consensus 208 -~~~~~~~t~~y~aPE~~~---~--~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~--~~~---------~~~~~~~~ 270 (491)
+-.+.+|+..|||||+.. + ..|+.++|.||||||||-|++|.+||.+.-... |.. ..+..+.+
T Consensus 241 P~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQE 320 (463)
T KOG0607|consen 241 PELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQE 320 (463)
T ss_pred ccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhc
Confidence 112345677899999763 2 348899999999999999999999997642110 100 01111111
Q ss_pred cc--ccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 271 SC--LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 271 ~~--~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.. .+..-+..++.+..+++..+|..|+.+|.++..++.
T Consensus 321 GkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 321 GKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred cCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 10 111112346789999999999999999999888876
|
|
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-36 Score=292.11 Aligned_cols=242 Identities=19% Similarity=0.228 Sum_probs=189.6
Q ss_pred ccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCC--------------hhHHHHHHHHHhccCCCCcceEEeEeecCCe
Q 011184 63 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--------------PRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 127 (491)
Q Consensus 63 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~ 127 (491)
..||.|+||+||++.. .+++.||||++....... ...+.+|+++++.++||||+++++++..++.
T Consensus 15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 94 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGDF 94 (335)
T ss_pred hcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCCc
Confidence 4579999999999994 468999999986533221 1247789999999999999999999999999
Q ss_pred eEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC
Q 011184 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 207 (491)
Q Consensus 128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 207 (491)
.++||||+. ++|.+++.. ...+++.....++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....
T Consensus 95 ~~lv~e~~~-~~l~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~~-i~H~dl~~~nill~~~~~~kl~dfg~~~~~~ 170 (335)
T PTZ00024 95 INLVMDIMA-SDLKKVVDR--KIRLTESQVKCILLQILNGLNVLHKWY-FMHRDLSPANIFINSKGICKIADFGLARRYG 170 (335)
T ss_pred EEEEEeccc-cCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccccHHHeEECCCCCEEECCccceeecc
Confidence 999999997 689998863 456899999999999999999999999 9999999999999999999999999886543
Q ss_pred CC------------------CccccCCCCCCcccccCCC-CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccccc
Q 011184 208 DG------------------KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML 268 (491)
Q Consensus 208 ~~------------------~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~ 268 (491)
.. ....++..|+|||.+.+.. ++.++||||||+++|+|++|..|+...............+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~ 250 (335)
T PTZ00024 171 YPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELL 250 (335)
T ss_pred cccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 10 1123567899999987644 6889999999999999999998876543221111000000
Q ss_pred ccc----------------------cccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 269 TDS----------------------CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 269 ~~~----------------------~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
..+ ..........+..+.+++.+||+.+|++|||+++++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 251 GTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred CCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 000 0000011234578899999999999999999999997
|
|
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-36 Score=290.33 Aligned_cols=246 Identities=18% Similarity=0.280 Sum_probs=191.7
Q ss_pred ccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCC--CCChhHHHHHHHHHhccCCCCcceEEeEeec-CCeeEEEEec
Q 011184 59 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCE-GDERLLVAEY 134 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~-~~~~~lv~e~ 134 (491)
|.++..||.|+||.||++. ..++..||||++.... ....+.+.+|+++++.++||||++++++|.. ....++|+||
T Consensus 12 y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~ 91 (328)
T cd07856 12 YVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTEL 91 (328)
T ss_pred eEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeeh
Confidence 4556777999999999999 4478999999885432 2234678899999999999999999999866 4678999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-Cccc
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYS 213 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~ 213 (491)
+ +++|.+++. ..++++.....++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++...... ....
T Consensus 92 ~-~~~L~~~~~---~~~~~~~~~~~~~~ql~~aL~~LH~~~-iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~ 166 (328)
T cd07856 92 L-GTDLHRLLT---SRPLEKQFIQYFLYQILRGLKYVHSAG-VVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYV 166 (328)
T ss_pred h-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEeECCCCCEEeCccccccccCCCcCCCc
Confidence 8 579998884 456888888999999999999999999 999999999999999999999999998754332 3345
Q ss_pred cCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHh---------------hhc----c----ccccc
Q 011184 214 TNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI---------------RDR----N----LQMLT 269 (491)
Q Consensus 214 ~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~---------------~~~----~----~~~~~ 269 (491)
++..|+|||.+.+ ..++.++||||||+++++|++|+.|++....... ... . .....
T Consensus 167 ~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (328)
T cd07856 167 STRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLP 246 (328)
T ss_pred ccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhcc
Confidence 6788999998866 4689999999999999999999988765322100 000 0 00000
Q ss_pred c--ccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 270 D--SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 270 ~--~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
. ...........+..+.++|.+||+.+|++|||+.+++..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 247 KREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred ccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 000001112356789999999999999999999999873
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=276.21 Aligned_cols=247 Identities=18% Similarity=0.231 Sum_probs=191.7
Q ss_pred cccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC-CChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEEecCC
Q 011184 60 NIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
+-++.||.|+||+|++-.+ .+|+..|||++..... .+.++++.|.+...+- +.||||+++|.+..++..||.||.|+
T Consensus 67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd 146 (361)
T KOG1006|consen 67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD 146 (361)
T ss_pred HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh
Confidence 3457889999999999984 5699999999976554 3456788888876665 68999999999999999999999997
Q ss_pred CCCHHHHhc---ccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC---C
Q 011184 137 NETLAKHLF---HWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---K 210 (491)
Q Consensus 137 ~gsL~~~l~---~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~ 210 (491)
.||..+-. ......+++..+-.|..-...||.||...-+|||||+||+|||++..|.+||||||++....+. +
T Consensus 147 -~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT 225 (361)
T KOG1006|consen 147 -ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKT 225 (361)
T ss_pred -hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhh
Confidence 77765432 2234578898889999999999999987656999999999999999999999999998654433 2
Q ss_pred ccccCCCCCCcccccC--CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccc---cccCCCCchhHHHH
Q 011184 211 SYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS---CLEGQFTDDDGTEL 285 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 285 (491)
.-.|-..|||||.+.. ..++.+|||||||++|+|+.||+.|+..... +-+..-...... .....-....+..+
T Consensus 226 ~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s--vfeql~~Vv~gdpp~l~~~~~~~~~s~~~ 303 (361)
T KOG1006|consen 226 VDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS--VFEQLCQVVIGDPPILLFDKECVHYSFSM 303 (361)
T ss_pred hccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH--HHHHHHHHHcCCCCeecCcccccccCHHH
Confidence 2346778999998854 3489999999999999999999988765422 111111111111 11111122366789
Q ss_pred HHHHHHhccCCCCCCCChhHHHHH
Q 011184 286 VRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
..+|..||.+|-..||.+.++++.
T Consensus 304 ~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 304 VRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred HHHHHHHhhcccccCcchhhhhcC
Confidence 999999999999999999999873
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-37 Score=300.00 Aligned_cols=192 Identities=24% Similarity=0.321 Sum_probs=167.4
Q ss_pred ccCCCCCccEEEEEE-ECCCCEEEEEEeCCCC-CCChhHHHHHHHHHhccCCCCcceEEeEeecC------CeeEEEEec
Q 011184 63 SEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG------DERLLVAEY 134 (491)
Q Consensus 63 ~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~------~~~~lv~e~ 134 (491)
+.||+|+||.||+|+ ..+|+.||||.++... ....+...+|+++|++|+|||||+++++=... ....+||||
T Consensus 19 e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEy 98 (732)
T KOG4250|consen 19 ERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEY 98 (732)
T ss_pred hhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEee
Confidence 567999999999999 6679999999997643 34567899999999999999999999975443 346899999
Q ss_pred CCCCCHHHHhcccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeC--CCCC--eEEccCCCcccCCCC
Q 011184 135 MPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD--EDGN--PRLSTFGLMKNSRDG 209 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~--~~~~--~kl~Dfgla~~~~~~ 209 (491)
|.||||+..+....+ ..+++.+.+.++..++.||.|||+++ |+||||||.||++- .+|+ -||+|||.|+...+.
T Consensus 99 C~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~-IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~ 177 (732)
T KOG4250|consen 99 CSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG-IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDN 177 (732)
T ss_pred cCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC-ceeccCCCCcEEEeecCCCceEEeeecccccccCCCC
Confidence 999999999986443 47999999999999999999999998 99999999999983 4454 799999999987765
Q ss_pred C---ccccCCCCCCccccc-CCCCCCCccchhHHHHHHHHHhCCCCCCCc
Q 011184 210 K---SYSTNLAFTPPEYLR-TGRVTPESVIYSFGTLLLDLLSGKHIPPSH 255 (491)
Q Consensus 210 ~---~~~~t~~y~aPE~~~-~~~~~~~~Dv~slG~vl~elltg~~~~~~~ 255 (491)
+ +..||..|++||+.. .+.|+..+|.|||||++|+.+||..||...
T Consensus 178 s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~ 227 (732)
T KOG4250|consen 178 SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF 227 (732)
T ss_pred CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence 4 567999999999998 478999999999999999999999998543
|
|
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-36 Score=279.07 Aligned_cols=235 Identities=23% Similarity=0.277 Sum_probs=195.0
Q ss_pred CCCCCccEEEEEEEC-CCCEEEEEEeCCCCCC---ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCCH
Q 011184 65 HGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL 140 (491)
Q Consensus 65 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gsL 140 (491)
||.|++|.||++... +++.+|+|.+...... ....+..|+++++.++||||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 589999999999954 5899999998764432 245788999999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----CccccCC
Q 011184 141 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNL 216 (491)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~~~t~ 216 (491)
.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++.
T Consensus 81 ~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lh~~~-~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~ 157 (250)
T cd05123 81 FSHLSK--EGRFSEERARFYAAEIVLALEYLHSLG-IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTP 157 (250)
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCc
Confidence 999963 346899999999999999999999998 999999999999999999999999998765432 2345788
Q ss_pred CCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCC
Q 011184 217 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 296 (491)
Q Consensus 217 ~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d 296 (491)
.|++||.+.+...+.++|+||||+++|++++|..|+.............. ....++...+..+.+++.+||..|
T Consensus 158 ~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~i~~~l~~~ 231 (250)
T cd05123 158 EYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK------DPLRFPEFLSPEARDLISGLLQKD 231 (250)
T ss_pred cccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc------CCCCCCCCCCHHHHHHHHHHhcCC
Confidence 99999999888889999999999999999999988854432221111111 112344455688999999999999
Q ss_pred CCCCCCh---hHHHH
Q 011184 297 PRERPNP---KSLVT 308 (491)
Q Consensus 297 p~~Rps~---~~il~ 308 (491)
|++||++ ++++.
T Consensus 232 p~~R~~~~~~~~l~~ 246 (250)
T cd05123 232 PTKRLGSGGAEEIKA 246 (250)
T ss_pred HhhCCCcccHHHHHh
Confidence 9999999 55544
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=296.28 Aligned_cols=238 Identities=20% Similarity=0.242 Sum_probs=197.8
Q ss_pred CCccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEE
Q 011184 55 GFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~ 132 (491)
.+..+++-..+|.|+|+.|-.+. ..+++..++|++.+. ..+..+|+.++... +||||+++.+++.++.+.|+||
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~ 395 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM 395 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence 45678888899999999999998 556889999999754 23345677777666 7999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceee-CCCCCeEEccCCCcccCCCCC-
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF-DEDGNPRLSTFGLMKNSRDGK- 210 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill-~~~~~~kl~Dfgla~~~~~~~- 210 (491)
|++.|+-|.+.+.. .+.....+..|+.+|+.++.|||++| +|||||||+|||+ ++.++++|+|||.++......
T Consensus 396 e~l~g~ell~ri~~---~~~~~~e~~~w~~~lv~Av~~LH~~g-vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~ 471 (612)
T KOG0603|consen 396 ELLDGGELLRRIRS---KPEFCSEASQWAAELVSAVDYLHEQG-VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCD 471 (612)
T ss_pred hhccccHHHHHHHh---cchhHHHHHHHHHHHHHHHHHHHhcC-eeecCCChhheeecCCCCcEEEEEechhhhCchhhc
Confidence 99999988887753 33333677789999999999999999 9999999999999 699999999999998766552
Q ss_pred ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhh-HhhhccccccccccccCCCCchhHHHHHHHH
Q 011184 211 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 289 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 289 (491)
+-+-|..|.|||++....+++++|+||||++||+|++|+.|+.....+ .+. .. ...+.+...++..+.+|+
T Consensus 472 tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~----~~----i~~~~~s~~vS~~AKdLl 543 (612)
T KOG0603|consen 472 TPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIH----TR----IQMPKFSECVSDEAKDLL 543 (612)
T ss_pred ccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHH----Hh----hcCCccccccCHHHHHHH
Confidence 235578899999999889999999999999999999999988655433 111 11 112233467788999999
Q ss_pred HHhccCCCCCCCChhHHHH
Q 011184 290 SRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~ 308 (491)
.+||+.||.+||++.++..
T Consensus 544 ~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 544 QQLLQVDPALRLGADEIGA 562 (612)
T ss_pred HHhccCChhhCcChhhhcc
Confidence 9999999999999999987
|
|
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=283.28 Aligned_cols=246 Identities=23% Similarity=0.282 Sum_probs=194.6
Q ss_pred cccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC--CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 60 NIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
+++..+|+|++|.||+|+. .+++.||+|++.... ......+..|+.+++.++|+||+++++++...+..++||||++
T Consensus 2 ~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 81 (282)
T cd07829 2 EKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD 81 (282)
T ss_pred eeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC
Confidence 3456789999999999995 458999999997653 2234678899999999999999999999999999999999997
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC----cc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SY 212 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----~~ 212 (491)
++|.+++... ...+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||++....... ..
T Consensus 82 -~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 158 (282)
T cd07829 82 -MDLKKYLDKR-PGPLSPNLIKSIMYQLLRGLAYCHSHR-ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHE 158 (282)
T ss_pred -cCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChheEEEcCCCCEEEecCCcccccCCCccccCcc
Confidence 6999999642 247899999999999999999999998 9999999999999999999999999987653322 23
Q ss_pred ccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccc--------------------cccccc
Q 011184 213 STNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL--------------------QMLTDS 271 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~--------------------~~~~~~ 271 (491)
.++..|+|||.+.+. .++.++||||||++++||++|..|+............. ......
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (282)
T cd07829 159 VVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPK 238 (282)
T ss_pred ccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccc
Confidence 346789999998776 78999999999999999999988776543211100000 000000
Q ss_pred ---cccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 272 ---CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 272 ---~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.......+..+..+.+++.+||..||++||++.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 239 FPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred cCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0000111223678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=291.24 Aligned_cols=246 Identities=16% Similarity=0.210 Sum_probs=193.2
Q ss_pred cccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecCC------ee
Q 011184 58 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGD------ER 128 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~------~~ 128 (491)
.|.++..||.|++|.||++. ..++..||||++...... ....+.+|+.+++.++||||+++++++..+. ..
T Consensus 16 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 95 (343)
T cd07880 16 RYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDF 95 (343)
T ss_pred ceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceE
Confidence 46778888999999999999 556899999998643222 2346889999999999999999999987654 35
Q ss_pred EEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC
Q 011184 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 208 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 208 (491)
++||||+ +++|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.++|+|||++.....
T Consensus 96 ~lv~e~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~al~~LH~~g-i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~ 170 (343)
T cd07880 96 YLVMPFM-GTDLGKLMK---HEKLSEDRIQFLVYQMLKGLKYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQTDS 170 (343)
T ss_pred EEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeeccccccccc
Confidence 8999999 689998884 457899999999999999999999999 99999999999999999999999999876543
Q ss_pred C-CccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccc-------------------c
Q 011184 209 G-KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-------------------M 267 (491)
Q Consensus 209 ~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~-------------------~ 267 (491)
. ....+++.|++||.+.+ ..++.++|+||||+++++|++|..|+.............. .
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (343)
T cd07880 171 EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKN 250 (343)
T ss_pred CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHH
Confidence 3 23457889999999876 3588899999999999999999988764321110000000 0
Q ss_pred ccccc------ccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 268 LTDSC------LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 268 ~~~~~------~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
..... .........+..+.+++.+||+.||++|||+.+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 251 YVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000 000112345678999999999999999999999986
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=290.08 Aligned_cols=259 Identities=17% Similarity=0.234 Sum_probs=197.4
Q ss_pred ccCHHHHHHHhcCCccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEE
Q 011184 43 EFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLL 119 (491)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~ 119 (491)
....+++...+++| .+++.||+|+||.||++. ..+++.||+|++...... ..+.+.+|+.++++++||||++++
T Consensus 6 ~~~~~~~~~~~~~y---~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~ 82 (345)
T cd07877 6 QELNKTIWEVPERY---QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 82 (345)
T ss_pred hhHHHHHhhccCce---EEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCccccee
Confidence 34455566666555 456677999999999998 456899999999753221 245688899999999999999999
Q ss_pred eEeecC------CeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC
Q 011184 120 GCCCEG------DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 193 (491)
Q Consensus 120 ~~~~~~------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~ 193 (491)
+++... ...+++++++ +++|.+++. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++
T Consensus 83 ~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~ 157 (345)
T cd07877 83 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDC 157 (345)
T ss_pred eeeeecccccccccEEEEehhc-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChHHEEEcCCC
Confidence 988643 3467888887 789988874 346899999999999999999999999 99999999999999999
Q ss_pred CeEEccCCCcccCCCC-CccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcc-------
Q 011184 194 NPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN------- 264 (491)
Q Consensus 194 ~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~------- 264 (491)
.++|+|||++...... ....++..|+|||.+.+ ..++.++|||||||++|+|++|+.|++...........
T Consensus 158 ~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 237 (345)
T cd07877 158 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 237 (345)
T ss_pred CEEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 9999999998765433 23467889999998876 45888999999999999999999887543211100000
Q ss_pred ----ccccc-----------ccccc---CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 265 ----LQMLT-----------DSCLE---GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 265 ----~~~~~-----------~~~~~---~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
...+. ..... .......++++.++|.+||+.||.+||++.+++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 238 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred CHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 00000 00000 00111345789999999999999999999999873
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=280.46 Aligned_cols=243 Identities=16% Similarity=0.215 Sum_probs=194.3
Q ss_pred ccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCC-----CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 59 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW-----PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
|.+.+.||+|+||+||++... .+..+++|.++.... .....+..|+.+++.++||||+++++++......++||
T Consensus 2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (260)
T cd08222 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT 81 (260)
T ss_pred ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence 456678899999999999853 355566676654221 12345778999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-
Q 011184 133 EYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 209 (491)
Q Consensus 133 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 209 (491)
||+++++|.+++... ....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++. +.++|+|||++......
T Consensus 82 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~ 159 (260)
T cd08222 82 EYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR-ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC 159 (260)
T ss_pred EeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC-ccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence 999999999888532 2357899999999999999999999998 999999999999975 56999999988764332
Q ss_pred ---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHH
Q 011184 210 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
....+++.|+|||.+.+..++.++|+||||+++|+|++|..|+.............. ......+...+.++.
T Consensus 160 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 234 (260)
T cd08222 160 DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVE-----GPTPSLPETYSRQLN 234 (260)
T ss_pred ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHc-----CCCCCCcchhcHHHH
Confidence 234577889999999888889999999999999999999988764432222111111 112223456678999
Q ss_pred HHHHHhccCCCCCCCChhHHHH
Q 011184 287 RLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~ 308 (491)
+++.+||..+|++||++.++++
T Consensus 235 ~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 235 SIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred HHHHHHhcCChhhCcCHHHHhh
Confidence 9999999999999999999987
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=289.34 Aligned_cols=246 Identities=17% Similarity=0.242 Sum_probs=188.2
Q ss_pred ccccccCCCCCccEEEEEEEC-C--CCEEEEEEeCCCCCC--ChhHHHHHHHHHhcc-CCCCcceEEeEeecC----Cee
Q 011184 59 ENIVSEHGEKAPNVVYKGKLE-N--QRRIAVKRFNRMAWP--DPRQFLEEARSVGQL-RNNRLTNLLGCCCEG----DER 128 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~-~--~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~----~~~ 128 (491)
+++.+.||+|+||.||++... + +..||||++...... ..+.+.+|+++++++ +||||+++++++... ...
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 81 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL 81 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence 455677899999999999953 4 778999998643222 245688999999999 599999999975432 457
Q ss_pred EEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC
Q 011184 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 208 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 208 (491)
++++||+. ++|.+++. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||++.....
T Consensus 82 ~~~~e~~~-~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~ 157 (332)
T cd07857 82 YLYEELME-ADLHQIIR--SGQPLTDAHFQSFIYQILCGLKYIHSAN-VLHRDLKPGNLLVNADCELKICDFGLARGFSE 157 (332)
T ss_pred EEEEeccc-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHeEEcCCCCEEeCcCCCceeccc
Confidence 88999986 78998886 3467899999999999999999999999 99999999999999999999999999875432
Q ss_pred C--------CccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccc-----------ccc
Q 011184 209 G--------KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL-----------QML 268 (491)
Q Consensus 209 ~--------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~-----------~~~ 268 (491)
. ....++..|+|||.+.+ ..++.++||||||+++++|++|..|+............. ..+
T Consensus 158 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T cd07857 158 NPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRI 237 (332)
T ss_pred ccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 1 23457889999998765 458899999999999999999998875432111000000 000
Q ss_pred --------------ccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 269 --------------TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 269 --------------~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.............+..+.+++.+||+.||++|||+.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 238 GSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred hhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000111234578999999999999999999999986
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-36 Score=282.43 Aligned_cols=254 Identities=18% Similarity=0.266 Sum_probs=193.2
Q ss_pred ccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhcc--CCCCcceEEeEeecCC----eeEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL--RNNRLTNLLGCCCEGD----ERLL 130 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~H~niv~~~~~~~~~~----~~~l 130 (491)
...+++..+|+|.||.||+|.+. ++.||||++... +.+.|..|-+|.+.. +|+||++++++-.... .++|
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL 285 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL 285 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc-CceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence 34456677899999999999984 589999999643 456788888888764 8999999999876655 7899
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CCcccccccccceeeCCCCCeEEccCCC
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK--------GRALYHDLNAYRILFDEDGNPRLSTFGL 202 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~--------~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 202 (491)
|++|.+.|+|.++|. ...++|....+++..+++||+|||+. ..|+|||||+.||||..+++.-|+|||+
T Consensus 286 Vt~fh~kGsL~dyL~---~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL 362 (534)
T KOG3653|consen 286 VTEFHPKGSLCDYLK---ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL 362 (534)
T ss_pred EeeeccCCcHHHHHH---hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence 999999999999994 67899999999999999999999973 1399999999999999999999999999
Q ss_pred cccCCCCC------ccccCCCCCCcccccCCC-CC-----CCccchhHHHHHHHHHhCCCCCC-C------c--------
Q 011184 203 MKNSRDGK------SYSTNLAFTPPEYLRTGR-VT-----PESVIYSFGTLLLDLLSGKHIPP-S------H-------- 255 (491)
Q Consensus 203 a~~~~~~~------~~~~t~~y~aPE~~~~~~-~~-----~~~Dv~slG~vl~elltg~~~~~-~------~-------- 255 (491)
|..+..+. ..+||.+|||||++.+.. +. .+.||||+|.|||||++...... + .
T Consensus 363 Al~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~ 442 (534)
T KOG3653|consen 363 ALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN 442 (534)
T ss_pred eEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC
Confidence 98765432 357999999999998643 22 36999999999999999653211 0 0
Q ss_pred --hhhHhhhccccccccccccCCC-CchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccC
Q 011184 256 --ALDLIRDRNLQMLTDSCLEGQF-TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 256 --~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
..+.+..........+.++... ...-...+.+.+..||..||+.|.|+.=+-+++..+....
T Consensus 443 hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~ 507 (534)
T KOG3653|consen 443 HPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLW 507 (534)
T ss_pred CCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence 1111111111111111111110 1123457889999999999999999988888777665543
|
|
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=287.56 Aligned_cols=250 Identities=20% Similarity=0.262 Sum_probs=189.5
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecCC------
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGD------ 126 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~~------ 126 (491)
...+.+++.||.|++|.||++.. .+++.||||++......+ ...+.+|+++++.++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 34567778889999999999995 468999999986433222 346788999999999999999999875433
Q ss_pred --eeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcc
Q 011184 127 --ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 204 (491)
Q Consensus 127 --~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 204 (491)
..++||||+. ++|...+.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++.
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~ 163 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLEN-PSVKLTESQIKCYMLQLLEGINYLHENH-ILHRDIKAANILIDNQGILKIADFGLAR 163 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECcCccch
Confidence 4699999997 577777653 2457999999999999999999999999 9999999999999999999999999987
Q ss_pred cCCCCC---------------ccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccc---
Q 011184 205 NSRDGK---------------SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL--- 265 (491)
Q Consensus 205 ~~~~~~---------------~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~--- 265 (491)
...... ...+++.|+|||.+.+. .++.++||||||+++|+|++|++|+.............
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~ 243 (311)
T cd07866 164 PYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLC 243 (311)
T ss_pred hccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 543211 12346779999988654 47899999999999999999998875432211100000
Q ss_pred --------------cccccccccCCCC-------chhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 266 --------------QMLTDSCLEGQFT-------DDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 266 --------------~~~~~~~~~~~~~-------~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
............+ ....+.+.+++.+||+.||.+|||+.+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 244 GTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred CCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 0000000000011 123367889999999999999999999976
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=311.60 Aligned_cols=255 Identities=19% Similarity=0.200 Sum_probs=209.6
Q ss_pred HHHHHHhcCCccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCC---CCCCChhHHHHHHHHHhccCCCCcceEEeEe
Q 011184 47 EQLKNATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNR---MAWPDPRQFLEEARSVGQLRNNRLTNLLGCC 122 (491)
Q Consensus 47 ~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~ 122 (491)
.++....-+-.+++++..||+|+||.|.++++ .+++.||+|++++ ....+...|..|-.+|..-..+-|+.++-.|
T Consensus 65 ~~v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAF 144 (1317)
T KOG0612|consen 65 KKVKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAF 144 (1317)
T ss_pred HHHHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHh
Confidence 34444444556678888889999999999995 4588999999976 2233456799999999999999999999999
Q ss_pred ecCCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCC
Q 011184 123 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 202 (491)
Q Consensus 123 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 202 (491)
.+++++|+||||++||+|-.++.... ++++..++.++..|..||.-||+.| +|||||||+|||||..|++||+|||-
T Consensus 145 QD~~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mg-yVHRDiKPDNvLld~~GHikLADFGs 221 (1317)
T KOG0612|consen 145 QDERYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMG-YVHRDIKPDNVLLDKSGHIKLADFGS 221 (1317)
T ss_pred cCccceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhcc-ceeccCCcceeEecccCcEeeccchh
Confidence 99999999999999999999997533 7999999999999999999999999 99999999999999999999999997
Q ss_pred cccCC-CC----CccccCCCCCCcccccC-----CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccccccccc
Q 011184 203 MKNSR-DG----KSYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 272 (491)
Q Consensus 203 a~~~~-~~----~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~ 272 (491)
+-... ++ ..-+|||-|.+||++.. +.|+..+|.||+||++|||+.|..||..+..-.....++...
T Consensus 222 Clkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk---- 297 (1317)
T KOG0612|consen 222 CLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHK---- 297 (1317)
T ss_pred HHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchh----
Confidence 76544 33 24479999999999853 458999999999999999999999998776544444333321
Q ss_pred ccCCCC--chhHHHHHHHHHHhccCCCCCCCC---hhHHHHH
Q 011184 273 LEGQFT--DDDGTELVRLASRCLQYEPRERPN---PKSLVTA 309 (491)
Q Consensus 273 ~~~~~~--~~~~~~~~~li~~cl~~dp~~Rps---~~~il~~ 309 (491)
....|| ..+++++.+||.+.+. +|+.|.. +++|..+
T Consensus 298 ~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 298 ESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH 338 (1317)
T ss_pred hhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence 112233 3478899999999986 6888877 8888764
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=300.78 Aligned_cols=249 Identities=20% Similarity=0.284 Sum_probs=205.3
Q ss_pred cccccCCCCCccEEEEEEE-CCC----CEEEEEEeCCCC-CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 60 NIVSEHGEKAPNVVYKGKL-ENQ----RRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~-~~~----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
+...+||.|+||+||+|.+ ..| -+||||++.... .+....++.|+-+|.+|+|||+++++|+|.... ..||++
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 4457889999999999994 333 468999986543 334568999999999999999999999998765 889999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-cc
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-SY 212 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-~~ 212 (491)
|+|+|+|.++++. ...++.....+.|..||++||.|||.+. +|||||-..||||..-..+|+.|||+++...... .+
T Consensus 778 ~mP~G~LlDyvr~-hr~~igsq~lLnw~~QIAkgM~YLe~qr-lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey 855 (1177)
T KOG1025|consen 778 LMPLGCLLDYVRE-HRDNIGSQDLLNWCYQIAKGMKYLEEQR-LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEY 855 (1177)
T ss_pred hcccchHHHHHHH-hhccccHHHHHHHHHHHHHHHHHHHhcc-hhhhhhhhhheeecCCCeEEEEecchhhccCcccccc
Confidence 9999999999986 4567888999999999999999999998 9999999999999999999999999999765433 22
Q ss_pred -----ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHH
Q 011184 213 -----STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 213 -----~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
...+.|||-|.+....++.++|||||||++||++| |..|..+.....+.+- .....+..-|+.++.++.
T Consensus 856 ~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dl-----le~geRLsqPpiCtiDVy 930 (1177)
T KOG1025|consen 856 SAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDL-----LEKGERLSQPPICTIDVY 930 (1177)
T ss_pred cccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHH-----HhccccCCCCCCccHHHH
Confidence 12467999999999999999999999999999999 6677766555444322 111122334667788999
Q ss_pred HHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 287 RLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
.++.+||..|+..||+++++...+....+.
T Consensus 931 ~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 931 MVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred HHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 999999999999999999998877655443
|
|
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-36 Score=293.33 Aligned_cols=246 Identities=19% Similarity=0.266 Sum_probs=193.2
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC--CCChhHHHHHHHHHhccCCCCcceEEeEeecCCe------e
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE------R 128 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~------~ 128 (491)
.|.++..||.|++|.||+|.. .+++.||||++.... ......+.+|+.+++.++||||+++++++...+. .
T Consensus 16 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 95 (343)
T cd07851 16 RYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDV 95 (343)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccE
Confidence 466778889999999999995 458899999986532 1234567889999999999999999998866554 8
Q ss_pred EEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC
Q 011184 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 208 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 208 (491)
++|+||+ +++|.+++. ..++++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.....
T Consensus 96 ~lv~e~~-~~~L~~~~~---~~~l~~~~~~~~~~ql~~aL~~LH~~g-i~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~ 170 (343)
T cd07851 96 YLVTHLM-GADLNNIVK---CQKLSDDHIQFLVYQILRGLKYIHSAG-IIHRDLKPSNIAVNEDCELKILDFGLARHTDD 170 (343)
T ss_pred EEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEccccccccccc
Confidence 9999999 589999885 357999999999999999999999998 99999999999999999999999999876543
Q ss_pred C-CccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccc-----------------
Q 011184 209 G-KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT----------------- 269 (491)
Q Consensus 209 ~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~----------------- 269 (491)
. ....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||.................
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 250 (343)
T cd07851 171 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARN 250 (343)
T ss_pred cccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHH
Confidence 2 34457888999999865 3578899999999999999999988864432211110000000
Q ss_pred --cc---cccC---CCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 270 --DS---CLEG---QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 270 --~~---~~~~---~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.. .... ......+..+.+++.+||..||++|||+.+|+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 251 YIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 00 0000 011224678999999999999999999999987
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=274.66 Aligned_cols=218 Identities=20% Similarity=0.234 Sum_probs=177.7
Q ss_pred CCccEEEEEE-ECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCCHHHHhcc
Q 011184 68 KAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFH 146 (491)
Q Consensus 68 G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 146 (491)
|.+|.||++. ..+++.||+|++.... .+.+|...+....||||+++++++...+..++||||++|++|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 7899999999 4568999999996543 234555556666799999999999999999999999999999999864
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-CccccCCCCCCccccc
Q 011184 147 WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLR 225 (491)
Q Consensus 147 ~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~ 225 (491)
...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++++|||++...... ....++..|+|||.+.
T Consensus 79 --~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~ 155 (237)
T cd05576 79 --FLNIPEECVKRWAAEMVVALDALHREG-IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGG 155 (237)
T ss_pred --hcCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccC
Confidence 346899999999999999999999998 999999999999999999999999987654332 2334567899999998
Q ss_pred CCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCCh
Q 011184 226 TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 303 (491)
Q Consensus 226 ~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~ 303 (491)
+..++.++||||+|+++|+|++|..|+...... +. .......+...+..+.+++.+||+.||++||++
T Consensus 156 ~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-~~---------~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 156 ISEETEACDWWSLGAILFELLTGKTLVECHPSG-IN---------THTTLNIPEWVSEEARSLLQQLLQFNPTERLGA 223 (237)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-cc---------cccccCCcccCCHHHHHHHHHHccCCHHHhcCC
Confidence 888999999999999999999999765322111 00 001112344566789999999999999999986
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=306.70 Aligned_cols=242 Identities=20% Similarity=0.259 Sum_probs=182.8
Q ss_pred cccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCC-CCChhHHHHHHHHHhccCCCCcceEEeEeec-----------
Q 011184 58 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCE----------- 124 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~----------- 124 (491)
+.+.+..||+|+||.||+++ .-+|+.||||+|.... ...-....+|+.+|.+|+|||||+++..|.+
T Consensus 480 DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~ 559 (1351)
T KOG1035|consen 480 DFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIV 559 (1351)
T ss_pred hhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccccc
Confidence 34455666999999999999 4479999999997553 2224568899999999999999998743210
Q ss_pred -------------------------------------------------------------------C------------
Q 011184 125 -------------------------------------------------------------------G------------ 125 (491)
Q Consensus 125 -------------------------------------------------------------------~------------ 125 (491)
+
T Consensus 560 ~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~ 639 (1351)
T KOG1035|consen 560 ASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGS 639 (1351)
T ss_pred ccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCc
Confidence 0
Q ss_pred -----------------------------CeeEEEEecCCCCCHHHHhcccCCCCC-CHHHHHHHHHHHHHHHHHHHhCC
Q 011184 126 -----------------------------DERLLVAEYMPNETLAKHLFHWETHPM-KWAMRLRVVLHLAQALEYCTSKG 175 (491)
Q Consensus 126 -----------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~l-~~~~~~~i~~qi~~~L~~LH~~~ 175 (491)
-..||-||||+..+|.+++.. +... .....++++++|+.||.|+|++|
T Consensus 640 ~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~--N~~~~~~d~~wrLFreIlEGLaYIH~~g 717 (1351)
T KOG1035|consen 640 VILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRR--NHFNSQRDEAWRLFREILEGLAYIHDQG 717 (1351)
T ss_pred cccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHh--cccchhhHHHHHHHHHHHHHHHHHHhCc
Confidence 124788999997777777753 2222 46788999999999999999999
Q ss_pred CcccccccccceeeCCCCCeEEccCCCcccCC----------------------CCCccccCCCCCCcccccCCC---CC
Q 011184 176 RALYHDLNAYRILFDEDGNPRLSTFGLMKNSR----------------------DGKSYSTNLAFTPPEYLRTGR---VT 230 (491)
Q Consensus 176 ~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~----------------------~~~~~~~t~~y~aPE~~~~~~---~~ 230 (491)
||||||||.||++++++.|||+|||+|.... ..+...||..|+|||++.+.. |+
T Consensus 718 -iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn 796 (1351)
T KOG1035|consen 718 -IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYN 796 (1351)
T ss_pred -eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccccccc
Confidence 9999999999999999999999999987511 113456889999999997654 99
Q ss_pred CCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccccccccccc--CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 231 PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE--GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 231 ~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.|+|+||||||++||+. ||...+..... +..+.++..+ ..+..+..+.-..+|.++++.||.+|||+.++|.
T Consensus 797 ~KiDmYSLGIVlFEM~y---PF~TsMERa~i---L~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 797 SKIDMYSLGIVLFEMLY---PFGTSMERASI---LTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred chhhhHHHHHHHHHHhc---cCCchHHHHHH---HHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 99999999999999997 34433222111 1111111111 2234444456678999999999999999999986
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=309.24 Aligned_cols=146 Identities=23% Similarity=0.285 Sum_probs=129.6
Q ss_pred CccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCC---hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
+..|.++..||.|+||+||+|... +++.||||+++...... ...+..|+.++..++||||+++++++...+..+||
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 345678888999999999999954 68999999997543222 35788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcc
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 204 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 204 (491)
|||+.|++|.+++.. .+.+++..++.|+.||+.||.|||+++ ||||||||+||||+.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~--~~~l~~~~~~~i~~qil~aL~yLH~~g-IiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHI--YGYFDEEMAVKYISEVALALDYLHRHG-IIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999999863 356889999999999999999999998 9999999999999999999999999864
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=278.99 Aligned_cols=235 Identities=20% Similarity=0.266 Sum_probs=200.7
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC---CCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~ 132 (491)
+.+.+.+||+|+||.|-++.. .+.+.+|||+++++. ..+.+.-+.|-++|... +-|.+++++.+|+.-+.+|+||
T Consensus 350 DFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVM 429 (683)
T KOG0696|consen 350 DFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVM 429 (683)
T ss_pred ccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEE
Confidence 456677889999999999984 447789999998653 23445566788888877 5788999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC----C
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR----D 208 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~----~ 208 (491)
||+.||+|--++.. -+.+.++.+..++.+|+-||-+||++| ||+||||.+|||+|.+|.+||+|||+++..- .
T Consensus 430 EyvnGGDLMyhiQQ--~GkFKEp~AvFYAaEiaigLFFLh~kg-IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~T 506 (683)
T KOG0696|consen 430 EYVNGGDLMYHIQQ--VGKFKEPVAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVT 506 (683)
T ss_pred EEecCchhhhHHHH--hcccCCchhhhhhHHHHHHhhhhhcCC-eeeeeccccceEeccCCceEeeecccccccccCCcc
Confidence 99999999988863 457888899999999999999999999 9999999999999999999999999988532 2
Q ss_pred CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHH
Q 011184 209 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 288 (491)
Q Consensus 209 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (491)
..+++||+.|+|||++...+|+.+.|.|||||+||||+.|++||.++..+.+-..+... .-.+|..++.+..++
T Consensus 507 TkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~eh------nvsyPKslSkEAv~i 580 (683)
T KOG0696|consen 507 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEH------NVSYPKSLSKEAVAI 580 (683)
T ss_pred eeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHc------cCcCcccccHHHHHH
Confidence 35678999999999999999999999999999999999999999887665544332222 235788899999999
Q ss_pred HHHhccCCCCCCC
Q 011184 289 ASRCLQYEPRERP 301 (491)
Q Consensus 289 i~~cl~~dp~~Rp 301 (491)
....|.+.|.+|.
T Consensus 581 ckg~ltK~P~kRL 593 (683)
T KOG0696|consen 581 CKGLLTKHPGKRL 593 (683)
T ss_pred HHHHhhcCCcccc
Confidence 9999999999994
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=286.00 Aligned_cols=240 Identities=21% Similarity=0.232 Sum_probs=196.9
Q ss_pred ccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCC
Q 011184 63 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 139 (491)
Q Consensus 63 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gs 139 (491)
+.||+|-||+||-|.. ++|+.||||++.+.... ...++..|+.||+.++||.||.+...|+..+.++.|||-+.|.-
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GDM 649 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGDM 649 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcchH
Confidence 4679999999999994 57999999999764433 35678999999999999999999999999999999999997555
Q ss_pred HHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC---CCCeEEccCCCcccCCCC---Cccc
Q 011184 140 LAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRDG---KSYS 213 (491)
Q Consensus 140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~~~---~~~~ 213 (491)
|.-.| ....+++++.....++.||+.||.|||.++ |+|+||||+|||+.+ .-++||||||+|+...+. .+..
T Consensus 650 LEMIL-SsEkgRL~er~TkFlvtQIL~ALr~LH~kn-IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVV 727 (888)
T KOG4236|consen 650 LEMIL-SSEKGRLPERITKFLVTQILVALRYLHFKN-IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVV 727 (888)
T ss_pred HHHHH-HhhcccchHHHHHHHHHHHHHHHHHhhhcc-eeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhc
Confidence 55444 445678999999999999999999999999 999999999999963 457999999999987654 4678
Q ss_pred cCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhc
Q 011184 214 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 293 (491)
Q Consensus 214 ~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 293 (491)
||+.|+|||+++...|...-|+||+||++|--++|..||..+. .+.+.+...-. -.+...+.+++.+..+||..+|
T Consensus 728 GTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE--dIndQIQNAaF--MyPp~PW~eis~~AidlIn~LL 803 (888)
T KOG4236|consen 728 GTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE--DINDQIQNAAF--MYPPNPWSEISPEAIDLINNLL 803 (888)
T ss_pred CCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCcc--chhHHhhcccc--ccCCCchhhcCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998876432 12211111100 0112234567789999999999
Q ss_pred cCCCCCCCChhHHHH
Q 011184 294 QYEPRERPNPKSLVT 308 (491)
Q Consensus 294 ~~dp~~Rps~~~il~ 308 (491)
+..-.+|-|.+..+.
T Consensus 804 qVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 804 QVKMRKRYSVDKSLS 818 (888)
T ss_pred HHHHHHhcchHhhcc
Confidence 999999988877664
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-35 Score=302.04 Aligned_cols=247 Identities=21% Similarity=0.314 Sum_probs=200.4
Q ss_pred ccCCCCCccEEEEEEECC--------CCEEEEEEeCCCCCC-ChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEE
Q 011184 63 SEHGEKAPNVVYKGKLEN--------QRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~ 132 (491)
..+|+|.||.|++|.... ...||||.++..... +.+.+..|+++|+.+ +|+||+.++|+|...+..++|+
T Consensus 302 ~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~ 381 (609)
T KOG0200|consen 302 KYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIV 381 (609)
T ss_pred ceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEE
Confidence 377999999999998421 357999999865433 467899999999999 6999999999999999999999
Q ss_pred ecCCCCCHHHHhcccC-------C-------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEc
Q 011184 133 EYMPNETLAKHLFHWE-------T-------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLS 198 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~-------~-------~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~ 198 (491)
||+..|+|.+++++.. . ..++....+.++.||+.|++||+++. +|||||-..|||++.+..+||+
T Consensus 382 Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~-~vHRDLAaRNVLi~~~~~~kIa 460 (609)
T KOG0200|consen 382 EYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP-CVHRDLAARNVLITKNKVIKIA 460 (609)
T ss_pred EeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC-ccchhhhhhhEEecCCCEEEEc
Confidence 9999999999998643 0 13888999999999999999999997 9999999999999999999999
Q ss_pred cCCCcccCCCCCcc-----cc--CCCCCCcccccCCCCCCCccchhHHHHHHHHHhCC-CCCCCch-hhHhhhccccccc
Q 011184 199 TFGLMKNSRDGKSY-----ST--NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK-HIPPSHA-LDLIRDRNLQMLT 269 (491)
Q Consensus 199 Dfgla~~~~~~~~~-----~~--t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~-~~~~~~~-~~~~~~~~~~~~~ 269 (491)
|||+++.......+ .+ ...|||||.+....++.+||||||||+||||+|.. .|+++-. ...+. ...
T Consensus 461 DFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~-----~~l 535 (609)
T KOG0200|consen 461 DFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELL-----EFL 535 (609)
T ss_pred cccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHH-----HHH
Confidence 99999864443222 11 34599999999989999999999999999999954 4555411 11111 112
Q ss_pred cccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 270 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
........|..++.++..+|..||+.+|++||++.++.+.|+....
T Consensus 536 ~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 536 KEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred hcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence 2222334456667899999999999999999999999999988543
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=289.84 Aligned_cols=245 Identities=14% Similarity=0.214 Sum_probs=201.1
Q ss_pred ccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCCChhHHHHHHHHHhcc-CCCCcceEEeEeec-----CCeeEEE
Q 011184 59 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCE-----GDERLLV 131 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~-----~~~~~lv 131 (491)
.+++.++|.|.+|.||+++ .++++.+|||++..... ..++...|.++|+.+ .|||++.++|+|.. ++.+|||
T Consensus 21 ~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLV 99 (953)
T KOG0587|consen 21 FEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLV 99 (953)
T ss_pred cEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEE
Confidence 3455666999999999999 67899999999876553 345678889999988 69999999999863 5789999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC----
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR---- 207 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~---- 207 (491)
||||.|||..+++....+..+.|..+..|++.++.||.+||... +||||||-.|||++.++.+||+|||++....
T Consensus 100 MEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk-viHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~g 178 (953)
T KOG0587|consen 100 MEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVG 178 (953)
T ss_pred eeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc-eeeecccCceEEEeccCcEEEeeeeeeeeeecccc
Confidence 99999999999998766778999999999999999999999996 9999999999999999999999999876543
Q ss_pred CCCccccCCCCCCcccccCC-----CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhH
Q 011184 208 DGKSYSTNLAFTPPEYLRTG-----RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 282 (491)
Q Consensus 208 ~~~~~~~t~~y~aPE~~~~~-----~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (491)
...+..||+.|||||++... .|+.++|+||||++..||..|.+|+.....- ...+....++.+...-+...+
T Consensus 179 rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm---raLF~IpRNPPPkLkrp~kWs 255 (953)
T KOG0587|consen 179 RRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM---RALFLIPRNPPPKLKRPKKWS 255 (953)
T ss_pred cccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh---hhhccCCCCCCccccchhhHH
Confidence 33467899999999999643 3788999999999999999999765321110 011111222333334467889
Q ss_pred HHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 283 TELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 283 ~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.++.++|..||.+|-.+||++.++++
T Consensus 256 ~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 256 KKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred HHHHHHHHHHHhhccccCcchhhhcc
Confidence 99999999999999999999999885
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=269.02 Aligned_cols=250 Identities=18% Similarity=0.248 Sum_probs=192.5
Q ss_pred ccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhcc--CCCCcceEEeEeecCC----eeEEEE
Q 011184 59 ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL--RNNRLTNLLGCCCEGD----ERLLVA 132 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~H~niv~~~~~~~~~~----~~~lv~ 132 (491)
..+++.+|+|-||.||+|.++ |+.||||+|... +.+.+.+|.++.+.+ +|+||+.+++.-..++ +.|||+
T Consensus 213 I~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvT 288 (513)
T KOG2052|consen 213 IVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVT 288 (513)
T ss_pred eEEEEEecCccccceeecccc-CCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEee
Confidence 466788999999999999994 689999999643 466788999999875 9999999998765543 579999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhC-----CC--cccccccccceeeCCCCCeEEccCCCccc
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-----GR--ALYHDLNAYRILFDEDGNPRLSTFGLMKN 205 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-----~~--iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 205 (491)
+|.+.|||.|||. ..+++....++++..++.||++||.. |+ |.|||||+.||||.++|..-|+|+|||..
T Consensus 289 dYHe~GSL~DyL~---r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~ 365 (513)
T KOG2052|consen 289 DYHEHGSLYDYLN---RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 365 (513)
T ss_pred ecccCCcHHHHHh---hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEE
Confidence 9999999999995 57899999999999999999999952 32 99999999999999999999999999976
Q ss_pred CCCC--------CccccCCCCCCcccccCCC----CC--CCccchhHHHHHHHHHhCC----------CCCCCc-----h
Q 011184 206 SRDG--------KSYSTNLAFTPPEYLRTGR----VT--PESVIYSFGTLLLDLLSGK----------HIPPSH-----A 256 (491)
Q Consensus 206 ~~~~--------~~~~~t~~y~aPE~~~~~~----~~--~~~Dv~slG~vl~elltg~----------~~~~~~-----~ 256 (491)
.... ...+||..|||||++.... +. ..+||||||.|+||++-.. .||..- .
T Consensus 366 h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs 445 (513)
T KOG2052|consen 366 HDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPS 445 (513)
T ss_pred ecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCC
Confidence 5433 3457999999999986532 21 2699999999999997642 233221 1
Q ss_pred hhHhhhcccccccccccc-CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 257 LDLIRDRNLQMLTDSCLE-GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
.+.+..-.-.....+..+ .-.....-..+.++|..||..+|..|-|+=-|.+.|..+..
T Consensus 446 ~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 446 FEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred HHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 112221111111111111 11223455688899999999999999999999988887764
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=269.64 Aligned_cols=248 Identities=16% Similarity=0.184 Sum_probs=195.1
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccC--CCC----cceEEeEeecCCeeEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR--NNR----LTNLLGCCCEGDERLL 130 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--H~n----iv~~~~~~~~~~~~~l 130 (491)
.+.+++.+|+|.||.|-.+.. ..+..||||+++... .-.+..+-|+++|+++. .|+ +|.+.++|.-.++.||
T Consensus 90 Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCi 168 (415)
T KOG0671|consen 90 RYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICI 168 (415)
T ss_pred ceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEE
Confidence 577888999999999999994 447899999997533 12345677999999993 343 7888899999999999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC-------------------
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE------------------- 191 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~------------------- 191 (491)
|+|.+ |.|+.+++...+-.+++...+..++.|++.++++||+.+ ++|-||||+|||+.+
T Consensus 169 vfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k-l~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ 246 (415)
T KOG0671|consen 169 VFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK-LTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPL 246 (415)
T ss_pred EEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc-eeecCCChheEEEeccceEEEeccCCccceeccC
Confidence 99998 579999998766678999999999999999999999998 999999999999832
Q ss_pred -CCCeEEccCCCcccCCCC-CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhH---hhhcccc
Q 011184 192 -DGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL---IRDRNLQ 266 (491)
Q Consensus 192 -~~~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~---~~~~~~~ 266 (491)
+..++|+|||.|...... ...+.|..|.|||++.+-.++.++||||+||||+|+.||...|+.+.... +.+..+.
T Consensus 247 ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlG 326 (415)
T KOG0671|consen 247 KSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILG 326 (415)
T ss_pred CCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhC
Confidence 234899999998875543 45577999999999999999999999999999999999998776543111 1111111
Q ss_pred ccc---------------------------------ccccc----CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 267 MLT---------------------------------DSCLE----GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 267 ~~~---------------------------------~~~~~----~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.++ +++.+ .........++.+|+.+||..||.+|+|+.|++.
T Consensus 327 p~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 327 PIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred CCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence 100 00000 0011234467999999999999999999999987
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-36 Score=281.63 Aligned_cols=247 Identities=17% Similarity=0.192 Sum_probs=208.6
Q ss_pred CccccccccCCCCCccEEEEEEECCCC-EEEEEEeCCCCC---CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLENQR-RIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~-~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
+++.+++..||-|+||.|-+....+.. .+|+|++++... ...+....|-.+|...+.|.||++|..|.+...+|++
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmL 498 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYML 498 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhh
Confidence 556778899999999999999865433 489999876432 2345678899999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 210 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 210 (491)
||-|-||.|+..+++ .+.+...+...++..++.|++|||+++ ||+|||||+|.+++.+|-+||.|||+|+....+.
T Consensus 499 mEaClGGElWTiLrd--Rg~Fdd~tarF~~acv~EAfeYLH~k~-iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~K 575 (732)
T KOG0614|consen 499 MEACLGGELWTILRD--RGSFDDYTARFYVACVLEAFEYLHRKG-IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRK 575 (732)
T ss_pred HHhhcCchhhhhhhh--cCCcccchhhhhHHHHHHHHHHHHhcC-ceeccCChhheeeccCCceEEeehhhHHHhccCCc
Confidence 999999999999984 567888999999999999999999999 9999999999999999999999999999876553
Q ss_pred --ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHH
Q 011184 211 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 288 (491)
Q Consensus 211 --~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (491)
+++||+.|.|||++.....+.+.|.||||+++|||++|++||.+...-.....++.. .-.-.+|..++....++
T Consensus 576 TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkG----id~i~~Pr~I~k~a~~L 651 (732)
T KOG0614|consen 576 TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKG----IDKIEFPRRITKTATDL 651 (732)
T ss_pred eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhh----hhhhhcccccchhHHHH
Confidence 678999999999999999999999999999999999999999765443333222222 22335667777899999
Q ss_pred HHHhccCCCCCCCC-----hhHHHHH
Q 011184 289 ASRCLQYEPRERPN-----PKSLVTA 309 (491)
Q Consensus 289 i~~cl~~dp~~Rps-----~~~il~~ 309 (491)
|.+++..+|.+|.. +.+|.++
T Consensus 652 ik~LCr~~P~ERLG~~~~gI~DIkkH 677 (732)
T KOG0614|consen 652 IKKLCRDNPTERLGYQKGGINDIKKH 677 (732)
T ss_pred HHHHHhcCcHhhhccccCChHHHHhh
Confidence 99999999999965 5566553
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-35 Score=249.09 Aligned_cols=257 Identities=21% Similarity=0.279 Sum_probs=204.0
Q ss_pred ccCHHHHHHHhcCCccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccC-CCCcceEEe
Q 011184 43 EFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNRLTNLLG 120 (491)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~ 120 (491)
-+.++......++-+.|+++.++|+|.++.||.|. ..+++.++||++++.. .+.+.+|+.+|..|. ||||+++++
T Consensus 24 YWdYE~~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~D 100 (338)
T KOG0668|consen 24 YWDYESLVIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLD 100 (338)
T ss_pred hcchhheeeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhh
Confidence 46778877788888999999999999999999999 6678999999998654 467889999999996 999999999
Q ss_pred EeecC--CeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC-CCCeEE
Q 011184 121 CCCEG--DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRL 197 (491)
Q Consensus 121 ~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl 197 (491)
+..++ ....||+||+.+.+..... ..++...+..++.+++.||.|+|+.| |+|||+||.|++||. ...++|
T Consensus 101 iV~Dp~SktpaLiFE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS~G-ImHRDVKPhNvmIdh~~rkLrl 174 (338)
T KOG0668|consen 101 IVKDPESKTPSLIFEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHSMG-IMHRDVKPHNVMIDHELRKLRL 174 (338)
T ss_pred hhcCccccCchhHhhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHhcC-cccccCCcceeeechhhceeee
Confidence 98775 4578999999998887655 35777888999999999999999999 999999999999995 456999
Q ss_pred ccCCCcccCCCCCcc---ccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCch--hh-Hhhh--------
Q 011184 198 STFGLMKNSRDGKSY---STNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHA--LD-LIRD-------- 262 (491)
Q Consensus 198 ~Dfgla~~~~~~~~~---~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~--~~-~~~~-------- 262 (491)
+|+|+|.....+..+ ..+..|--||++-.- .++..-|+|||||++..|+..+.||.-.. .+ .++.
T Consensus 175 IDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~e 254 (338)
T KOG0668|consen 175 IDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDE 254 (338)
T ss_pred eecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHH
Confidence 999999987776654 346678899988654 48899999999999999999999874320 00 0000
Q ss_pred -----cccccccccc----------------ccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 263 -----RNLQMLTDSC----------------LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 263 -----~~~~~~~~~~----------------~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.......++. ....-..-.++++.+|+.++|..|.++|+|++|.+.
T Consensus 255 l~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 255 LYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 0000001110 001111123589999999999999999999999986
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=257.26 Aligned_cols=250 Identities=20% Similarity=0.264 Sum_probs=190.8
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCC--CCCChhHHHHHHHHHhccCCCCcceEEeEeecC--------
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM--AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG-------- 125 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~-------- 125 (491)
+.++.+..+|+|.||.||+|.. .+|+.||+|++-.. ...-....++|+.+|..|+|+|++.++..|...
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 3456667889999999999994 45888998876332 122355678999999999999999999887542
Q ss_pred CeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCccc
Q 011184 126 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 205 (491)
Q Consensus 126 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 205 (491)
..+|+||.+|. .+|...|.. ....++..++.+++.++..||.|+|+.. |+|||+|++|+||+.+|.+||+|||+++.
T Consensus 97 ~t~ylVf~~ce-hDLaGlLsn-~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k-ilHRDmKaaNvLIt~dgilklADFGlar~ 173 (376)
T KOG0669|consen 97 ATFYLVFDFCE-HDLAGLLSN-RKVRFSLSEIKKVMKGLMNGLYYIHRNK-ILHRDMKAANVLITKDGILKLADFGLARA 173 (376)
T ss_pred ceeeeeHHHhh-hhHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHhh-HHhhcccHhhEEEcCCceEEeeccccccc
Confidence 34899999997 788888864 2357899999999999999999999997 99999999999999999999999999976
Q ss_pred CCCCC--------ccccCCCCCCcccccCCC-CCCCccchhHHHHHHHHHhCCCCCCCchhhHh-------hhccccccc
Q 011184 206 SRDGK--------SYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLI-------RDRNLQMLT 269 (491)
Q Consensus 206 ~~~~~--------~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~-------~~~~~~~~~ 269 (491)
+.... ....|..|.+||.+.|.. ++++.|||+.|||+.||+|+.+.+.+...... -...-...+
T Consensus 174 fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevW 253 (376)
T KOG0669|consen 174 FSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVW 253 (376)
T ss_pred eecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccC
Confidence 54332 223478999999998765 99999999999999999999987765432110 000000000
Q ss_pred cc--------------cccCCC--------CchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 270 DS--------------CLEGQF--------TDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 270 ~~--------------~~~~~~--------~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
+. ...+.+ +-.-..+..+|+.++|..||.+|+++++++..
T Consensus 254 P~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 254 PNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred CCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 00 000000 01112478899999999999999999999874
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-33 Score=258.50 Aligned_cols=234 Identities=22% Similarity=0.276 Sum_probs=192.1
Q ss_pred CccEEEEEEEC-CCCEEEEEEeCCCCCCC-hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCCHHHHhcc
Q 011184 69 APNVVYKGKLE-NQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFH 146 (491)
Q Consensus 69 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 146 (491)
+||.||++... +|+.+++|++....... .+.+.+|++.+++++|+||+++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 47899999965 48999999997665444 67899999999999999999999999999999999999999999999864
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC---CccccCCCCCCccc
Q 011184 147 WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEY 223 (491)
Q Consensus 147 ~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~~~~~t~~y~aPE~ 223 (491)
...+++..++.++.+++.+|.+||+.+ ++|+||+|+||+++.++.++|+|||.+...... ....++..|++||.
T Consensus 81 --~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~ 157 (244)
T smart00220 81 --RGRLSEDEARFYARQILSALEYLHSNG-IIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEV 157 (244)
T ss_pred --ccCCCHHHHHHHHHHHHHHHHHHHHcC-eecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHH
Confidence 233889999999999999999999998 999999999999999999999999998765543 34557889999999
Q ss_pred ccCCCCCCCccchhHHHHHHHHHhCCCCCCC-chhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCC
Q 011184 224 LRTGRVTPESVIYSFGTLLLDLLSGKHIPPS-HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 302 (491)
Q Consensus 224 ~~~~~~~~~~Dv~slG~vl~elltg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps 302 (491)
+.+..++.++||||||+++++|++|..|+.. .....+........... ......++.++.+++.+||..+|++||+
T Consensus 158 ~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~~p~~Rp~ 234 (244)
T smart00220 158 LLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPF---PPPEWKISPEAKDLIRKLLVKDPEKRLT 234 (244)
T ss_pred HccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCC---ccccccCCHHHHHHHHHHccCCchhccC
Confidence 9888889999999999999999999988755 22222211111111100 0001115678999999999999999999
Q ss_pred hhHHHH
Q 011184 303 PKSLVT 308 (491)
Q Consensus 303 ~~~il~ 308 (491)
+.++++
T Consensus 235 ~~~~~~ 240 (244)
T smart00220 235 AEEALQ 240 (244)
T ss_pred HHHHhh
Confidence 999987
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-34 Score=273.68 Aligned_cols=247 Identities=19% Similarity=0.219 Sum_probs=192.3
Q ss_pred HHHHhcCCccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeec
Q 011184 49 LKNATSGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 124 (491)
Q Consensus 49 ~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~ 124 (491)
++++.=+-+-.-.|+.||-|+||.|.++. .++...+|+|.+.+.. .........|-+||..-+.+-||+|+-.|.+
T Consensus 621 LkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQD 700 (1034)
T KOG0608|consen 621 LKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQD 700 (1034)
T ss_pred HHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEecc
Confidence 33333333445667889999999999998 5667789999986533 1234457789999999999999999999999
Q ss_pred CCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcc
Q 011184 125 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 204 (491)
Q Consensus 125 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 204 (491)
.+.+|+||+|++||++-.+|.+ .+-+.+...+.++.++..|+++.|..| +|||||||+|||||.+|.+||.||||+.
T Consensus 701 kdnLYFVMdYIPGGDmMSLLIr--mgIFeE~LARFYIAEltcAiesVHkmG-FIHRDiKPDNILIDrdGHIKLTDFGLCT 777 (1034)
T KOG0608|consen 701 KDNLYFVMDYIPGGDMMSLLIR--MGIFEEDLARFYIAELTCAIESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCT 777 (1034)
T ss_pred CCceEEEEeccCCccHHHHHHH--hccCHHHHHHHHHHHHHHHHHHHHhcc-ceecccCccceEEccCCceeeeeccccc
Confidence 9999999999999999999874 467888899999999999999999999 9999999999999999999999999975
Q ss_pred cCC---------CC-------------------------------------CccccCCCCCCcccccCCCCCCCccchhH
Q 011184 205 NSR---------DG-------------------------------------KSYSTNLAFTPPEYLRTGRVTPESVIYSF 238 (491)
Q Consensus 205 ~~~---------~~-------------------------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~sl 238 (491)
-+. .+ ...+||+.|+|||++....++-.+|.||.
T Consensus 778 GfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~ 857 (1034)
T KOG0608|consen 778 GFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSV 857 (1034)
T ss_pred cceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHh
Confidence 211 00 02357899999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCC
Q 011184 239 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 301 (491)
Q Consensus 239 G~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp 301 (491)
|||||||+.|+.||............. -+...+...+..++++++.++|.+++. +++.|.
T Consensus 858 gvil~em~~g~~pf~~~tp~~tq~kv~--nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RL 917 (1034)
T KOG0608|consen 858 GVILYEMLVGQPPFLADTPGETQYKVI--NWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRL 917 (1034)
T ss_pred hHHHHHHhhCCCCccCCCCCcceeeee--ehhhccccccccccCHHHHHHHHHHhc-Chhhhh
Confidence 999999999999986543221111110 011112223345677888888877654 566663
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-34 Score=240.81 Aligned_cols=196 Identities=18% Similarity=0.229 Sum_probs=164.7
Q ss_pred cccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCC-ChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEEecCC
Q 011184 60 NIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
..+.+||+|++|.|-+-+ ..+|...|+|.+...-.. ..++.++|+.+..+. ..|.+|+++|.......+||.||.|+
T Consensus 49 ~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~ 128 (282)
T KOG0984|consen 49 VGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMD 128 (282)
T ss_pred hhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhh
Confidence 446789999999998888 457999999999754432 245688888877765 79999999999999999999999997
Q ss_pred CCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCCc---
Q 011184 137 NETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS--- 211 (491)
Q Consensus 137 ~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~--- 211 (491)
.||..+-.+. .++.+++..+-+|+..|..||.|||++-.+||||+||+||||+.+|++|+||||++....+.-.
T Consensus 129 -tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~ 207 (282)
T KOG0984|consen 129 -TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTM 207 (282)
T ss_pred -hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHH
Confidence 7887765431 4568999999999999999999999986699999999999999999999999999877655432
Q ss_pred cccCCCCCCcccccC----CCCCCCccchhHHHHHHHHHhCCCCCCCch
Q 011184 212 YSTNLAFTPPEYLRT----GRVTPESVIYSFGTLLLDLLSGKHIPPSHA 256 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~----~~~~~~~Dv~slG~vl~elltg~~~~~~~~ 256 (491)
-.|--.|||||.+.. ..|+.+|||||||++++||.+++.|++...
T Consensus 208 daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~ 256 (282)
T KOG0984|consen 208 DAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG 256 (282)
T ss_pred hcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC
Confidence 246678999998854 358999999999999999999998876543
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=289.06 Aligned_cols=248 Identities=21% Similarity=0.248 Sum_probs=163.7
Q ss_pred CccccccccCCCCCccEEEEEEE-CC----CCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeE------eec
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-EN----QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGC------CCE 124 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~------~~~ 124 (491)
...+.+...||+|+||.||+|++ .+ +..||||++.... ..+.+..+ .+....+.+++.+... ...
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~--~~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~ 206 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG--AVEIWMNE--RVRRACPNSCADFVYGFLEPVSSKK 206 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc--hhHHHHHH--HHHhhchhhHHHHHHhhhccccccc
Confidence 45677788889999999999995 44 6899999986432 11111111 1122222233222221 245
Q ss_pred CCeeEEEEecCCCCCHHHHhcccCC------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccc
Q 011184 125 GDERLLVAEYMPNETLAKHLFHWET------------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 186 (491)
Q Consensus 125 ~~~~~lv~e~~~~gsL~~~l~~~~~------------------~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~N 186 (491)
+...++||||+++++|.+++..... .......+..++.||+.||.|||+.+ |+||||||+|
T Consensus 207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g-IiHRDLKP~N 285 (566)
T PLN03225 207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG-IVHRDVKPQN 285 (566)
T ss_pred CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC-EEeCcCCHHH
Confidence 5678999999999999998864210 00113345679999999999999998 9999999999
Q ss_pred eeeCC-CCCeEEccCCCcccCCCC-----CccccCCCCCCcccccCCC----------------------CCCCccchhH
Q 011184 187 ILFDE-DGNPRLSTFGLMKNSRDG-----KSYSTNLAFTPPEYLRTGR----------------------VTPESVIYSF 238 (491)
Q Consensus 187 ill~~-~~~~kl~Dfgla~~~~~~-----~~~~~t~~y~aPE~~~~~~----------------------~~~~~Dv~sl 238 (491)
||++. ++.+||+|||+++..... ....+++.|+|||.+.... ++.++|||||
T Consensus 286 ILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSl 365 (566)
T PLN03225 286 IIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSA 365 (566)
T ss_pred EEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHH
Confidence 99985 689999999999754322 3456789999999664322 3345699999
Q ss_pred HHHHHHHHhCCCCCCCchhhHhh---hcc--cccc---ccccccC------CCCchhHHHHHHHHHHhccCCCCCCCChh
Q 011184 239 GTLLLDLLSGKHIPPSHALDLIR---DRN--LQML---TDSCLEG------QFTDDDGTELVRLASRCLQYEPRERPNPK 304 (491)
Q Consensus 239 G~vl~elltg~~~~~~~~~~~~~---~~~--~~~~---~~~~~~~------~~~~~~~~~~~~li~~cl~~dp~~Rps~~ 304 (491)
||++|||+++..+.......... ... ...+ ....... ...........+|+.+||+.||.+|||+.
T Consensus 366 GviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~ 445 (566)
T PLN03225 366 GLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAK 445 (566)
T ss_pred HHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHH
Confidence 99999999976544332111110 000 0000 0000000 00011123455899999999999999999
Q ss_pred HHHH
Q 011184 305 SLVT 308 (491)
Q Consensus 305 ~il~ 308 (491)
++++
T Consensus 446 e~L~ 449 (566)
T PLN03225 446 AALA 449 (566)
T ss_pred HHhC
Confidence 9998
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=262.93 Aligned_cols=245 Identities=23% Similarity=0.303 Sum_probs=192.4
Q ss_pred ccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCC-CCCC------hhHHHHHHHHHhccCCCCcceEEeEeecC-CeeE
Q 011184 59 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRM-AWPD------PRQFLEEARSVGQLRNNRLTNLLGCCCEG-DERL 129 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~-~~~~------~~~~~~E~~~l~~l~H~niv~~~~~~~~~-~~~~ 129 (491)
|-++..||+|+|+.||++. +...+.||||+-... .|.+ .+...+|-+|.+.|+||.||+++++|.-+ +.+|
T Consensus 465 YLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFC 544 (775)
T KOG1151|consen 465 YLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFC 544 (775)
T ss_pred HHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccce
Confidence 4566789999999999999 666889999986432 2333 23577899999999999999999999754 6789
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccccceeeC---CCCCeEEccCCCccc
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFD---EDGNPRLSTFGLMKN 205 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-~iiH~Dlkp~Nill~---~~~~~kl~Dfgla~~ 205 (491)
-|+|||+|.+|.-+|. ..+.+++.+...|+.||+.||.||.+.. +|||=||||.|||+- ..|.+||.|||+++.
T Consensus 545 TVLEYceGNDLDFYLK--QhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKI 622 (775)
T KOG1151|consen 545 TVLEYCEGNDLDFYLK--QHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKI 622 (775)
T ss_pred eeeeecCCCchhHHHH--hhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhh
Confidence 9999999999999986 3467899999999999999999998754 599999999999994 558899999999987
Q ss_pred CCCCC-----------ccccCCCCCCcccccCC----CCCCCccchhHHHHHHHHHhCCCCCCCchhh-Hhhhccccccc
Q 011184 206 SRDGK-----------SYSTNLAFTPPEYLRTG----RVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLT 269 (491)
Q Consensus 206 ~~~~~-----------~~~~t~~y~aPE~~~~~----~~~~~~Dv~slG~vl~elltg~~~~~~~~~~-~~~~~~~~~~~ 269 (491)
..... ...||..|++||.+--+ +.+.+.||||+|||+|..+-|+.||...... .+... ..+.
T Consensus 623 MdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqe--NTIl 700 (775)
T KOG1151|consen 623 MDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQE--NTIL 700 (775)
T ss_pred ccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhh--hchh
Confidence 65432 34578999999988644 3788999999999999999999998643221 11111 1111
Q ss_pred cccccCCC--CchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 270 DSCLEGQF--TDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 270 ~~~~~~~~--~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
... .-.| -+.++.+...||++||++.-++|..+.++..
T Consensus 701 kAt-EVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 701 KAT-EVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred cce-eccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 111 1112 2346688999999999999999998888765
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=254.19 Aligned_cols=241 Identities=17% Similarity=0.255 Sum_probs=196.6
Q ss_pred CccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCC---CCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~l 130 (491)
..+..++.+||+|++..|.++. ..+.+.+|+|++++.- ..+..-.+.|-.+..+- +||.+|-++.+|.....+++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 4456778888999999999999 4568899999997643 33455567788888877 69999999999999999999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC---
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR--- 207 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~--- 207 (491)
|.||++||+|--++. ....++++....+..+|+.||.|||+.| ||.||||.+|||+|..|.+||.|+|+++..-
T Consensus 329 vieyv~ggdlmfhmq--rqrklpeeharfys~ei~lal~flh~rg-iiyrdlkldnvlldaeghikltdygmcke~l~~g 405 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEICLALNFLHERG-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPG 405 (593)
T ss_pred EEEEecCcceeeehh--hhhcCcHHHhhhhhHHHHHHHHHHhhcC-eeeeeccccceEEccCCceeecccchhhcCCCCC
Confidence 999999999976664 4567999999999999999999999999 9999999999999999999999999987532
Q ss_pred -CCCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHh---hhcc-ccccccccccCCCCchhH
Q 011184 208 -DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI---RDRN-LQMLTDSCLEGQFTDDDG 282 (491)
Q Consensus 208 -~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~ 282 (491)
..++++||+.|.|||++++..|....|.|+|||+++||+.|+.||.--..+.. .... .+.+... .-.+|..++
T Consensus 406 d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilek--qiriprsls 483 (593)
T KOG0695|consen 406 DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEK--QIRIPRSLS 483 (593)
T ss_pred cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhh--cccccceee
Confidence 34578899999999999999999999999999999999999999853221110 0011 1111111 123466677
Q ss_pred HHHHHHHHHhccCCCCCCC
Q 011184 283 TELVRLASRCLQYEPRERP 301 (491)
Q Consensus 283 ~~~~~li~~cl~~dp~~Rp 301 (491)
.....++...|.+||.+|.
T Consensus 484 vkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 484 VKASHVLKGFLNKDPKERL 502 (593)
T ss_pred hhhHHHHHHhhcCCcHHhc
Confidence 7888999999999999994
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-32 Score=273.84 Aligned_cols=251 Identities=18% Similarity=0.200 Sum_probs=175.6
Q ss_pred cccccccCCCCCccEEEEEEE-----------------CCCCEEEEEEeCCCCCCChh--------------HHHHHHHH
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-----------------ENQRRIAVKRFNRMAWPDPR--------------QFLEEARS 106 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~--------------~~~~E~~~ 106 (491)
.+.+..+||+|+||+||+|.. ..++.||||+++.......+ .+..|+.+
T Consensus 146 ~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~ 225 (507)
T PLN03224 146 DFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYM 225 (507)
T ss_pred CceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHH
Confidence 455666779999999999963 23568999998654322222 23457777
Q ss_pred HhccCCCCc-----ceEEeEeec--------CCeeEEEEecCCCCCHHHHhcccC----------------------CCC
Q 011184 107 VGQLRNNRL-----TNLLGCCCE--------GDERLLVAEYMPNETLAKHLFHWE----------------------THP 151 (491)
Q Consensus 107 l~~l~H~ni-----v~~~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~----------------------~~~ 151 (491)
+.+++|.++ ++++++|.. .+..+|||||+++++|.+++.... ...
T Consensus 226 l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~ 305 (507)
T PLN03224 226 CAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDK 305 (507)
T ss_pred HHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccccc
Confidence 777876654 677777753 346899999999999999886321 112
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-----ccccCCCCCCcccccC
Q 011184 152 MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYLRT 226 (491)
Q Consensus 152 l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~~~~t~~y~aPE~~~~ 226 (491)
+++..+..++.|++.+|.|||+.+ |+||||||+|||++.++.+||+|||++....... ...+|+.|+|||.+..
T Consensus 306 ~~~~~~~~i~~ql~~aL~~lH~~~-ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~ 384 (507)
T PLN03224 306 RDINVIKGVMRQVLTGLRKLHRIG-IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVM 384 (507)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCC-eecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcC
Confidence 456788899999999999999998 9999999999999999999999999986543321 1234789999998764
Q ss_pred CCC----------------------CCCccchhHHHHHHHHHhCCC-CCCCch-h-hHhh--hccc---cccccccccCC
Q 011184 227 GRV----------------------TPESVIYSFGTLLLDLLSGKH-IPPSHA-L-DLIR--DRNL---QMLTDSCLEGQ 276 (491)
Q Consensus 227 ~~~----------------------~~~~Dv~slG~vl~elltg~~-~~~~~~-~-~~~~--~~~~---~~~~~~~~~~~ 276 (491)
... ..+.||||+||++++|++|.. |+.... . .... .... ...........
T Consensus 385 ~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~ 464 (507)
T PLN03224 385 PQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFS 464 (507)
T ss_pred CCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcc
Confidence 321 124799999999999999875 332110 0 0000 0000 00111111111
Q ss_pred CCchhHHHHHHHHHHhccCCC---CCCCChhHHHHH
Q 011184 277 FTDDDGTELVRLASRCLQYEP---RERPNPKSLVTA 309 (491)
Q Consensus 277 ~~~~~~~~~~~li~~cl~~dp---~~Rps~~~il~~ 309 (491)
.....+....+|+.++|..+| .+|+|+.+++++
T Consensus 465 ~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 465 LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred cccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 233456789999999999866 689999999873
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.1e-34 Score=249.11 Aligned_cols=244 Identities=18% Similarity=0.288 Sum_probs=185.5
Q ss_pred ccCCCCCccEEEEEE-ECCCCEEEEEEeCCCC--CCChhHHHHHHHHHhccCCCCcceEEeEeecCC-----eeEEEEec
Q 011184 63 SEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD-----ERLLVAEY 134 (491)
Q Consensus 63 ~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~-----~~~lv~e~ 134 (491)
+.||.|+||+||..+ -++|+.||+|++.... ....+.+.+|+.+|..++|.|++..++...-.. .+|.|+|.
T Consensus 59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TEL 138 (449)
T KOG0664|consen 59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTEL 138 (449)
T ss_pred CcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHH
Confidence 566999999999999 4679999999985422 123467889999999999999999888765432 36788999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCCc---
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS--- 211 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~--- 211 (491)
+. .+|...+. ....++...+.-+++||++||+|||+.+ |+||||||.|.|++.|..+||||||+++.......
T Consensus 139 mQ-SDLHKIIV--SPQ~Ls~DHvKVFlYQILRGLKYLHsA~-ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hM 214 (449)
T KOG0664|consen 139 MQ-SDLHKIIV--SPQALTPDHVKVFVYQILRGLKYLHTAN-ILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNM 214 (449)
T ss_pred HH-hhhhheec--cCCCCCcchhhhhHHHHHhhhHHHhhcc-hhhccCCCccEEeccCceEEecccccccccchhhhhhh
Confidence 96 78888776 5678999999999999999999999999 99999999999999999999999999987544322
Q ss_pred --cccCCCCCCcccccCCC-CCCCccchhHHHHHHHHHhCCCCCCCchh----hH------------hh---hc-ccccc
Q 011184 212 --YSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHAL----DL------------IR---DR-NLQML 268 (491)
Q Consensus 212 --~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~~~~----~~------------~~---~~-~~~~~ 268 (491)
...|-.|.|||+++|.. |+.+.||||+||++.||+..+-.|..... +. ++ ++ ....+
T Consensus 215 TqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~L 294 (449)
T KOG0664|consen 215 THEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVL 294 (449)
T ss_pred HHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhh
Confidence 23577899999999865 89999999999999999988766533211 00 00 00 00000
Q ss_pred ccccccCCC--------CchhHHHHHHHHHHhccCCCCCCCChhHHHHHh
Q 011184 269 TDSCLEGQF--------TDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 310 (491)
Q Consensus 269 ~~~~~~~~~--------~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L 310 (491)
..+...+.+ +..-..+...++.+++..||..|.+..+.+..+
T Consensus 295 R~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 295 RAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred ccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 000000111 112234677889999999999999999988754
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-32 Score=272.04 Aligned_cols=239 Identities=21% Similarity=0.223 Sum_probs=180.5
Q ss_pred CccccccccCCCCCcc-EEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEEe
Q 011184 56 FAVENIVSEHGEKAPN-VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g-~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e 133 (491)
|+..+++ |.|+.| .||+|.. .|+.||||++-... .....+|+..|+.- +|||||++++.-.+....||..|
T Consensus 511 ~~~~eil---G~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalE 583 (903)
T KOG1027|consen 511 FSPKEIL---GYGSNGTVVFRGVY-EGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALE 583 (903)
T ss_pred eccHHHc---ccCCCCcEEEEEee-CCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEeh
Confidence 5555555 555554 5899998 57899999985433 34577999999988 69999999999989999999999
Q ss_pred cCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC---C--CCeEEccCCCcccC
Q 011184 134 YMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---D--GNPRLSTFGLMKNS 206 (491)
Q Consensus 134 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~---~--~~~kl~Dfgla~~~ 206 (491)
.|. .+|.+++... ......-...+.++.|++.||++||+.+ ||||||||.||||+. + .+++|+|||+++..
T Consensus 584 LC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~-iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 584 LCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK-IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred Hhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc-cccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 996 9999999642 1111111344678899999999999998 999999999999975 3 46999999999875
Q ss_pred CCC-------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhC-CCCCCCchhhHhhhccccccccccccCCCC
Q 011184 207 RDG-------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG-KHIPPSHALDLIRDRNLQMLTDSCLEGQFT 278 (491)
Q Consensus 207 ~~~-------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (491)
..+ ....||-+|+|||++.....+.+.||||+|||+|+.++| .+||......... ++...... ..+.
T Consensus 662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~N--Il~~~~~L---~~L~ 736 (903)
T KOG1027|consen 662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQAN--ILTGNYTL---VHLE 736 (903)
T ss_pred CCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhh--hhcCccce---eeec
Confidence 433 345689999999999998888899999999999999998 5565433221111 01110000 0111
Q ss_pred chhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 279 DDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 279 ~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.....+..+||.+|+.++|..||++.+++.
T Consensus 737 ~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 737 PLPDCEAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred cCchHHHHHHHHHhcCCCcccCCCHHHHhC
Confidence 111128999999999999999999999986
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-32 Score=265.40 Aligned_cols=248 Identities=18% Similarity=0.215 Sum_probs=203.5
Q ss_pred CccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 56 FAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
-++++++.++|.|++|.||+++ ..+++..|||+++.....+..-.++|+-+++..+|||||.++|.+...+..|+.|||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 4567888999999999999999 667999999999987777778889999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccC----CCCC
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS----RDGK 210 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~----~~~~ 210 (491)
|.||+|.+.-+ ..+++++.++..+.+..+.||+|||+++ -+|||||-.|||+++.|.+|++|||.+... ....
T Consensus 94 cgggslQdiy~--~TgplselqiayvcRetl~gl~ylhs~g-k~hRdiKGanilltd~gDvklaDfgvsaqitati~Krk 170 (829)
T KOG0576|consen 94 CGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLKYLHSQG-KIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRK 170 (829)
T ss_pred cCCCcccceee--ecccchhHHHHHHHhhhhccchhhhcCC-cccccccccceeecccCceeecccCchhhhhhhhhhhh
Confidence 99999998765 5688999999999999999999999999 889999999999999999999999986543 3446
Q ss_pred ccccCCCCCCcccc---cCCCCCCCccchhHHHHHHHHHhCCCCCCCc-hhhHhhhccccccccccccCCCCchhHHHHH
Q 011184 211 SYSTNLAFTPPEYL---RTGRVTPESVIYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 211 ~~~~t~~y~aPE~~---~~~~~~~~~Dv~slG~vl~elltg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
.+.||+.|||||+. +.+.|...+|||++|+...|+---++|.... ......-..-.....+.+ .-....++.+.
T Consensus 171 sfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~l--kDk~kws~~fh 248 (829)
T KOG0576|consen 171 SFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTL--KDKTKWSEFFH 248 (829)
T ss_pred cccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcc--cCCccchHHHH
Confidence 78899999999976 3466899999999999999998877553221 111110000000111111 11334668899
Q ss_pred HHHHHhccCCCCCCCChhHHHH
Q 011184 287 RLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~ 308 (491)
+|++.||.++|++||+++.++.
T Consensus 249 ~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 249 NFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred HHHHHHhcCCCccCCChhhhee
Confidence 9999999999999999988775
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-30 Score=232.00 Aligned_cols=206 Identities=27% Similarity=0.413 Sum_probs=182.1
Q ss_pred CCCCCccEEEEEEEC-CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCCHHH
Q 011184 65 HGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 142 (491)
Q Consensus 65 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gsL~~ 142 (491)
||.|++|.||++... +++.+++|++...... ....+.+|++.++.++|++|+++++++......++++|+++|++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 589999999999964 4899999999765432 24679999999999999999999999999899999999999999999
Q ss_pred HhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC-CCCeEEccCCCcccCCCC----CccccCCC
Q 011184 143 HLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRDG----KSYSTNLA 217 (491)
Q Consensus 143 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla~~~~~~----~~~~~t~~ 217 (491)
++... ...+++..+..++.+++.+|.+||+.+ ++|+||+|.||+++. ++.++|+|||.+...... ....+...
T Consensus 81 ~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~-~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~ 158 (215)
T cd00180 81 LLKEN-EGKLSEDEILRILLQILEGLEYLHSNG-IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPA 158 (215)
T ss_pred HHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCC
Confidence 98632 146889999999999999999999998 999999999999998 899999999998765443 33456788
Q ss_pred CCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCC
Q 011184 218 FTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 296 (491)
Q Consensus 218 y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~d 296 (491)
|++||.+... ..+.++|+|++|+++++| ..+.+++..|++.+
T Consensus 159 ~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------~~~~~~l~~~l~~~ 201 (215)
T cd00180 159 YMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------PELKDLIRKMLQKD 201 (215)
T ss_pred ccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------HHHHHHHHHHhhCC
Confidence 9999999877 788999999999999999 47899999999999
Q ss_pred CCCCCChhHHHHH
Q 011184 297 PRERPNPKSLVTA 309 (491)
Q Consensus 297 p~~Rps~~~il~~ 309 (491)
|++||++.++++.
T Consensus 202 p~~R~~~~~l~~~ 214 (215)
T cd00180 202 PEKRPSAKEILEH 214 (215)
T ss_pred cccCcCHHHHhhC
Confidence 9999999999874
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-32 Score=256.48 Aligned_cols=195 Identities=18% Similarity=0.177 Sum_probs=166.9
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccC------CCCcceEEeEeecCCeeEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR------NNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------H~niv~~~~~~~~~~~~~l 130 (491)
.|++.+..|.|-|++|.+|.. ..|..||||+|..+.. -.+.=+.|+++|++|. --|+++++..|...+++||
T Consensus 433 RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLCl 511 (752)
T KOG0670|consen 433 RYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCL 511 (752)
T ss_pred eeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEE
Confidence 577888999999999999994 4488999999975432 2344568999999994 3589999999999999999
Q ss_pred EEecCCCCCHHHHhcccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCC-CCeEEccCCCcccCCC
Q 011184 131 VAEYMPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSRD 208 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~~ 208 (491)
|||-+. .+|.+.|...+. -.+....+..++.|+..||..|...+ |+|.||||+|||+++. ..+||||||.|.....
T Consensus 512 VFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~-vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~e 589 (752)
T KOG0670|consen 512 VFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG-VLHADIKPDNILVNESKNILKLCDFGSASFASE 589 (752)
T ss_pred Eehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC-eeecccCccceEeccCcceeeeccCcccccccc
Confidence 999995 899999986543 35788899999999999999999999 9999999999999855 5689999999876554
Q ss_pred C--CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCc
Q 011184 209 G--KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH 255 (491)
Q Consensus 209 ~--~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~ 255 (491)
. ..+..+..|.|||++.|.+|+...|+||+||+||||.||+.+||+.
T Consensus 590 neitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~ 638 (752)
T KOG0670|consen 590 NEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGR 638 (752)
T ss_pred ccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCC
Confidence 3 3345677899999999999999999999999999999999888764
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-31 Score=235.89 Aligned_cols=241 Identities=17% Similarity=0.232 Sum_probs=186.1
Q ss_pred ccccCCCCCccEEEEEE-ECCCCEEEEEEeCCC--CCCChhHHHHHHHHHhccCCCCcceEEeEeecCC------eeEEE
Q 011184 61 IVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRM--AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD------ERLLV 131 (491)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~------~~~lv 131 (491)
-+..+|.|+- .|..+. .-.+++||+|++... .....++..+|..++..+.|+||++++.+|.-.. ..|+|
T Consensus 21 nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v 99 (369)
T KOG0665|consen 21 NLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLV 99 (369)
T ss_pred eecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHH
Confidence 3456688877 555555 335889999998543 2334567889999999999999999999997543 47999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC--
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 209 (491)
||+|+ .+|...+. ..++-.+...|+.|++.|++|||+.+ |+||||||+||++..++.+||.|||+++.....
T Consensus 100 ~e~m~-~nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~~-IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~ 173 (369)
T KOG0665|consen 100 MELMD-ANLCQVIL----MELDHETISYILYQMLCGIKHLHSAG-IIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFM 173 (369)
T ss_pred HHhhh-hHHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhcc-eeecccCcccceecchhheeeccchhhcccCcccc
Confidence 99997 88988875 34667788999999999999999999 999999999999999999999999999865433
Q ss_pred -CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhc-------------------------
Q 011184 210 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR------------------------- 263 (491)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~------------------------- 263 (491)
+.+..|..|.|||++.+-.+....||||+||++.||++|+-.|++...-.....
T Consensus 174 mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~ 253 (369)
T KOG0665|consen 174 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVE 253 (369)
T ss_pred cCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhh
Confidence 455678899999999988899999999999999999999987765421100000
Q ss_pred ---------cccccccccccCC--CCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 264 ---------NLQMLTDSCLEGQ--FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 264 ---------~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
....+++...... .+..-+..+.+++.+||..||++|.|++++|.
T Consensus 254 ~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 254 NRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred cChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 0001111111111 11123457889999999999999999999998
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.3e-31 Score=241.34 Aligned_cols=246 Identities=20% Similarity=0.235 Sum_probs=194.1
Q ss_pred cccccCCCCCccEEEEEEECC------CCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecC-CeeEEE
Q 011184 60 NIVSEHGEKAPNVVYKGKLEN------QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG-DERLLV 131 (491)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~-~~~~lv 131 (491)
++...+-+|.||.||+|.|++ .+.|-+|.++....+ ....++.|.-++..+.|||+..+.+++.++ ...+.+
T Consensus 287 ~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~ 366 (563)
T KOG1024|consen 287 RLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVL 366 (563)
T ss_pred echhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEE
Confidence 344556899999999997643 345778887654422 345688999999999999999999998765 567889
Q ss_pred EecCCCCCHHHHhc-----cc-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCccc
Q 011184 132 AEYMPNETLAKHLF-----HW-ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 205 (491)
Q Consensus 132 ~e~~~~gsL~~~l~-----~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 205 (491)
+.++.-|+|..+|. +. ..+.++..+...++.|++.|+.|||+++ +||.||-..|.+||+..++||+|-.+++.
T Consensus 367 y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~-ViHkDiAaRNCvIdd~LqVkltDsaLSRD 445 (563)
T KOG1024|consen 367 YPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG-VIHKDIAARNCVIDDQLQVKLTDSALSRD 445 (563)
T ss_pred EeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC-cccchhhhhcceehhheeEEeccchhccc
Confidence 99999999999997 21 2345677788899999999999999999 99999999999999999999999999886
Q ss_pred CCCCC------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCc----hhhHhhhcccccccccccc
Q 011184 206 SRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSH----ALDLIRDRNLQMLTDSCLE 274 (491)
Q Consensus 206 ~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~----~~~~~~~~~~~~~~~~~~~ 274 (491)
..+.. .......||+||.+....|+.++|||||||+||||+| |+.|+..- ....++++. +
T Consensus 446 LFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGy---------R 516 (563)
T KOG1024|consen 446 LFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGY---------R 516 (563)
T ss_pred cCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccc---------e
Confidence 54332 1223578999999999999999999999999999999 44444221 111122211 1
Q ss_pred CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 275 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 275 ~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
-.-|-++|.++..++..||+..|++||+++++..-|..+..
T Consensus 517 laQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ 557 (563)
T KOG1024|consen 517 LAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHT 557 (563)
T ss_pred ecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 22355788899999999999999999999999988876543
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=250.24 Aligned_cols=198 Identities=16% Similarity=0.203 Sum_probs=170.2
Q ss_pred hcCCccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCC-----CC---ChhHHHHHHHHHhccC---CCCcceEEe
Q 011184 53 TSGFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA-----WP---DPRQFLEEARSVGQLR---NNRLTNLLG 120 (491)
Q Consensus 53 ~~~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~---~~~~~~~E~~~l~~l~---H~niv~~~~ 120 (491)
.++|++|..++.+|.|+||.|++|+++ +...|+||.+.+.. |- ..-..-.|++||..|+ |+||+++++
T Consensus 557 ~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLd 636 (772)
T KOG1152|consen 557 YKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLD 636 (772)
T ss_pred ecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhh
Confidence 367889999999999999999999954 57789999986533 11 1123457999999996 999999999
Q ss_pred EeecCCeeEEEEecC-CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEcc
Q 011184 121 CCCEGDERLLVAEYM-PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLST 199 (491)
Q Consensus 121 ~~~~~~~~~lv~e~~-~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~D 199 (491)
+|++++.+||+||-. +|-+|.+++.. ...+++.+..-|+.||+.|+++||+.+ |||||||-+||.++.+|.+||+|
T Consensus 637 fFEddd~yyl~te~hg~gIDLFd~IE~--kp~m~E~eAk~IFkQV~agi~hlh~~~-ivhrdikdenvivd~~g~~klid 713 (772)
T KOG1152|consen 637 FFEDDDYYYLETEVHGEGIDLFDFIEF--KPRMDEPEAKLIFKQVVAGIKHLHDQG-IVHRDIKDENVIVDSNGFVKLID 713 (772)
T ss_pred eeecCCeeEEEecCCCCCcchhhhhhc--cCccchHHHHHHHHHHHhccccccccC-ceecccccccEEEecCCeEEEee
Confidence 999999999999976 45689999863 456899999999999999999999999 99999999999999999999999
Q ss_pred CCCcccCCC--CCccccCCCCCCcccccCCCC-CCCccchhHHHHHHHHHhCCCCCC
Q 011184 200 FGLMKNSRD--GKSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPP 253 (491)
Q Consensus 200 fgla~~~~~--~~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~~~~ 253 (491)
||.+..... ...+.||..|.|||++.|.+| +..-|||++|++||.++....|+.
T Consensus 714 fgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 714 FGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred ccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 998876554 357889999999999999886 557999999999999988887763
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.5e-30 Score=237.89 Aligned_cols=243 Identities=24% Similarity=0.339 Sum_probs=189.8
Q ss_pred cccccccCCCCCccEEEEEEEC----CCCEEEEEEeCCCCCCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE----NQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~ 132 (491)
.+.++.++|.|+|++||++++. .++.||+|.+...+ .......|+++|..+ .+.||+.+.+++..++.+.+|+
T Consensus 37 ~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivl 114 (418)
T KOG1167|consen 37 AYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVL 114 (418)
T ss_pred hhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEe
Confidence 3567788899999999999943 46889999997655 456799999999999 5999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeC-CCCCeEEccCCCcccC-----
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMKNS----- 206 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~----- 206 (491)
||+++.+..++.. .++...+..+++.++.||.++|..| ||||||||+|+|.+ ..+.-.|+|||+|...
T Consensus 115 p~~~H~~f~~l~~-----~l~~~~i~~Yl~~ll~Al~~~h~~G-IvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~ 188 (418)
T KOG1167|consen 115 PYFEHDRFRDLYR-----SLSLAEIRWYLRNLLKALAHLHKNG-IVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQ 188 (418)
T ss_pred cccCccCHHHHHh-----cCCHHHHHHHHHHHHHHhhhhhccC-ccccCCCccccccccccCCceEEechhHHHHHhhhh
Confidence 9999999999884 3668889999999999999999999 99999999999998 5677899999998610
Q ss_pred ------------CC--C-----------------------------CccccCCCCCCcccccCC-CCCCCccchhHHHHH
Q 011184 207 ------------RD--G-----------------------------KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLL 242 (491)
Q Consensus 207 ------------~~--~-----------------------------~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl 242 (491)
.. + ....||++|.|||++... ..+++.||||.|||+
T Consensus 189 ~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~ 268 (418)
T KOG1167|consen 189 TEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVIL 268 (418)
T ss_pred hhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecccee
Confidence 00 0 012478999999998764 478999999999999
Q ss_pred HHHHhCCCCCCCchhh--------------Hhh------hc-------c----------cccc-cccccc--------CC
Q 011184 243 LDLLSGKHIPPSHALD--------------LIR------DR-------N----------LQML-TDSCLE--------GQ 276 (491)
Q Consensus 243 ~elltg~~~~~~~~~~--------------~~~------~~-------~----------~~~~-~~~~~~--------~~ 276 (491)
+.+++++.||.....+ .+. +. . ...+ ...+.. ..
T Consensus 269 Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~ 348 (418)
T KOG1167|consen 269 LSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREI 348 (418)
T ss_pred ehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeecc
Confidence 9999999987432100 000 00 0 0000 000000 01
Q ss_pred CCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 277 FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 277 ~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.....+..+.+|+.+||..||.+|.|++++|+
T Consensus 349 ~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 349 GSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred ccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 11223458899999999999999999999997
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.3e-29 Score=234.37 Aligned_cols=131 Identities=17% Similarity=0.184 Sum_probs=111.6
Q ss_pred cccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccC-----CC---CcceEEeEeec----
Q 011184 58 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-----NN---RLTNLLGCCCE---- 124 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----H~---niv~~~~~~~~---- 124 (491)
.|-++++||.|-|++||++. ..+.+.||+|+.+... .-.+..+.|+++|++++ |+ +||+|++.|..
T Consensus 79 RY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpN 157 (590)
T KOG1290|consen 79 RYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPN 157 (590)
T ss_pred eEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCC
Confidence 67888999999999999999 6678899999986432 12345778999999993 33 59999999865
Q ss_pred CCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeC
Q 011184 125 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 190 (491)
Q Consensus 125 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~ 190 (491)
+.++|||+|++ |.+|..+|....-+.++...+.+|+.||+.||.|||.+..|||-||||+|||+.
T Consensus 158 G~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 158 GQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred CcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 46899999999 789999998766678999999999999999999999875699999999999983
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.2e-30 Score=223.90 Aligned_cols=243 Identities=20% Similarity=0.215 Sum_probs=182.3
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCChhHHHHHHHHHhcc-CCCCcceEEeE-eecCCeeEEEEec
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGC-CCEGDERLLVAEY 134 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~-~~~~~~~~lv~e~ 134 (491)
.+++...+|+|-||.+-++.++ +.+.+++|.+.... ...++|.+|..---.| .|.||+.-+++ |+..+.+++++||
T Consensus 25 ~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~ 103 (378)
T KOG1345|consen 25 VYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEF 103 (378)
T ss_pred hhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeecc
Confidence 4667778899999999999964 57889999987544 2467899998776667 59999987765 6667788899999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeC--CCCCeEEccCCCcccCCCCCcc
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD--EDGNPRLSTFGLMKNSRDGKSY 212 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~--~~~~~kl~Dfgla~~~~~~~~~ 212 (491)
+|.|+|.+-+. ...+.+.-..+++.|+++||.|||+++ +||||||.+||||- +..++||||||+.+........
T Consensus 104 aP~gdL~snv~---~~GigE~~~K~v~~ql~SAi~fMHskn-lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~ 179 (378)
T KOG1345|consen 104 APRGDLRSNVE---AAGIGEANTKKVFAQLLSAIEFMHSKN-LVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKY 179 (378)
T ss_pred CccchhhhhcC---cccccHHHHHHHHHHHHHHHHHhhccc-hhhcccccceEEEecCCccEEEeeecccccccCceehh
Confidence 99999999884 456888888999999999999999999 99999999999993 4457999999998765543322
Q ss_pred -ccCCCCCCcccccCC-----CCCCCccchhHHHHHHHHHhCCCCCCCchhhH---hhhccccccccccccCCCCchhHH
Q 011184 213 -STNLAFTPPEYLRTG-----RVTPESVIYSFGTLLLDLLSGKHIPPSHALDL---IRDRNLQMLTDSCLEGQFTDDDGT 283 (491)
Q Consensus 213 -~~t~~y~aPE~~~~~-----~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 283 (491)
..+..|.+||..... ...+.+|||.||++++.++||..|+....... +.......-..+..+ .....+++
T Consensus 180 ~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P-~~F~~fs~ 258 (378)
T KOG1345|consen 180 LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALP-KKFNPFSE 258 (378)
T ss_pred hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCc-hhhcccCH
Confidence 345779999976532 26788999999999999999998775321110 111111111111111 12234567
Q ss_pred HHHHHHHHhccCCCCCCCChhHH
Q 011184 284 ELVRLASRCLQYEPRERPNPKSL 306 (491)
Q Consensus 284 ~~~~li~~cl~~dp~~Rps~~~i 306 (491)
.+.++..+-|.++|++|--..++
T Consensus 259 ~a~r~Fkk~lt~~~~drcki~~~ 281 (378)
T KOG1345|consen 259 KALRLFKKSLTPRFKDRCKIWTA 281 (378)
T ss_pred HHHHHHHHhcCCcccccchhHHH
Confidence 88999999999999999433333
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=225.32 Aligned_cols=191 Identities=25% Similarity=0.304 Sum_probs=167.9
Q ss_pred ccccCCCCCccEEEEEEECC-CCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCC
Q 011184 61 IVSEHGEKAPNVVYKGKLEN-QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 138 (491)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~g 138 (491)
+...+|.|++|.||++.... ++.+++|.+...... ....+.+|++.++.++|+|++++++++......++++||++++
T Consensus 3 ~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 82 (225)
T smart00221 3 LGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGG 82 (225)
T ss_pred eeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCC
Confidence 44667999999999999654 899999999866544 5678999999999999999999999999989999999999999
Q ss_pred CHHHHhcccCCCC-CCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-----Ccc
Q 011184 139 TLAKHLFHWETHP-MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KSY 212 (491)
Q Consensus 139 sL~~~l~~~~~~~-l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~~ 212 (491)
+|.+++... .. +++..+..++.+++.+|.+||+.+ ++|+||+|.||+++.++.++|+|||.+...... ...
T Consensus 83 ~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 159 (225)
T smart00221 83 DLFDYLRKK--GGKLSEEEARFYLRQILEALEYLHSLG-IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTV 159 (225)
T ss_pred CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccce
Confidence 999998642 23 889999999999999999999998 999999999999999999999999998766543 345
Q ss_pred ccCCCCCCcccc-cCCCCCCCccchhHHHHHHHHHhCCCCCCC
Q 011184 213 STNLAFTPPEYL-RTGRVTPESVIYSFGTLLLDLLSGKHIPPS 254 (491)
Q Consensus 213 ~~t~~y~aPE~~-~~~~~~~~~Dv~slG~vl~elltg~~~~~~ 254 (491)
.++..|++||.+ ....++.++|+|+||+++++|++|+.||..
T Consensus 160 ~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 160 KGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred eccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 567889999998 666688899999999999999999988865
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.4e-28 Score=260.96 Aligned_cols=191 Identities=16% Similarity=0.184 Sum_probs=139.9
Q ss_pred ccCC-CCcceEEeEe-------ecCCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccc
Q 011184 109 QLRN-NRLTNLLGCC-------CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180 (491)
Q Consensus 109 ~l~H-~niv~~~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~ 180 (491)
.++| +||++++++| .....++++|||+ +++|.+++.. ....+++..++.++.||+.||.|||+++ |+||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~g-IvHr 104 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN-PDRSVDAFECFHVFRQIVEIVNAAHSQG-IVVH 104 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc-ccccccHHHHHHHHHHHHHHHHHHHhCC-eeec
Confidence 4455 5888888887 2334678889988 5799999964 2456899999999999999999999999 9999
Q ss_pred cccccceeeCC-------------------CCCeEEccCCCcccCCC--------------------CCccccCCCCCCc
Q 011184 181 DLNAYRILFDE-------------------DGNPRLSTFGLMKNSRD--------------------GKSYSTNLAFTPP 221 (491)
Q Consensus 181 Dlkp~Nill~~-------------------~~~~kl~Dfgla~~~~~--------------------~~~~~~t~~y~aP 221 (491)
||||+||||+. ++.+|++|||+++.... .....||+.||||
T Consensus 105 DlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 184 (793)
T PLN00181 105 NVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSP 184 (793)
T ss_pred cCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceECh
Confidence 99999999954 45566777777653210 0012467889999
Q ss_pred ccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCC
Q 011184 222 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 301 (491)
Q Consensus 222 E~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp 301 (491)
|++.+..++.++|||||||+||||++|..|+..... ..... .....++ ... ........++.+||+++|.+||
T Consensus 185 E~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~-~~~~~-~~~~~~~----~~~-~~~~~~~~~~~~~L~~~P~~Rp 257 (793)
T PLN00181 185 EEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR-TMSSL-RHRVLPP----QIL-LNWPKEASFCLWLLHPEPSCRP 257 (793)
T ss_pred hhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH-HHHHH-HHhhcCh----hhh-hcCHHHHHHHHHhCCCChhhCc
Confidence 999999999999999999999999998866542211 11100 0111111 101 1124567889999999999999
Q ss_pred ChhHHHHH
Q 011184 302 NPKSLVTA 309 (491)
Q Consensus 302 s~~~il~~ 309 (491)
++.++++.
T Consensus 258 s~~eil~h 265 (793)
T PLN00181 258 SMSELLQS 265 (793)
T ss_pred ChHHHhhc
Confidence 99999873
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.2e-28 Score=212.31 Aligned_cols=253 Identities=19% Similarity=0.267 Sum_probs=200.6
Q ss_pred CccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
++..+++-+|.....|..|+|+++.+ .+++|+++..... ..++|..|.-.|+-+.||||..++|.|..+....+|..
T Consensus 189 ~~~lnl~tkl~e~hsgelwrgrwqgn-divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq 267 (448)
T KOG0195|consen 189 VSSLNLITKLAESHSGELWRGRWQGN-DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQ 267 (448)
T ss_pred hhhhhhhhhhccCCCcccccccccCc-chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeee
Confidence 55667777888888899999999654 5666887654333 34679999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccc-cccccceeeCCCCCeEEccCCCcccCCCCCcc
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY 212 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~-Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~ 212 (491)
||+.|||+..++...+-.++-.+..+++.+|++|+.|||+..+++-| -|.+..|+||++.+++|+ .+-++.+......
T Consensus 268 ~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltaris-mad~kfsfqe~gr 346 (448)
T KOG0195|consen 268 YMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARIS-MADTKFSFQEVGR 346 (448)
T ss_pred eccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhee-cccceeeeecccc
Confidence 99999999999865554567788999999999999999998777777 899999999999988875 3333333333344
Q ss_pred ccCCCCCCcccccCCCC---CCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHH
Q 011184 213 STNLAFTPPEYLRTGRV---TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 289 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~~~---~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 289 (491)
...+.||+||.++..+- -.++|+|||.+++|||-|...||.....-...- .+.-..+...+|+..++.+..|+
T Consensus 347 ~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgm----kialeglrv~ippgis~hm~klm 422 (448)
T KOG0195|consen 347 AYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGM----KIALEGLRVHIPPGISRHMNKLM 422 (448)
T ss_pred ccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhh----hhhhccccccCCCCccHHHHHHH
Confidence 55789999999987653 347999999999999999998886433222111 11122234456778888999999
Q ss_pred HHhccCCCCCCCChhHHHHHhcccc
Q 011184 290 SRCLQYEPRERPNPKSLVTALSPLQ 314 (491)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~L~~~~ 314 (491)
.-|+..||.+||.+..|+-.|+...
T Consensus 423 ~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 423 NICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred HHHhcCCCCcCCCcceehhhHHHhc
Confidence 9999999999999999999887653
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.1e-27 Score=202.21 Aligned_cols=265 Identities=16% Similarity=0.144 Sum_probs=210.7
Q ss_pred cCHHHHHHHhcCCccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCC-CCcceEEeE
Q 011184 44 FTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRN-NRLTNLLGC 121 (491)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~~~~~ 121 (491)
.+.+++..+. .++++++||.|+||.+|.|. ..+|..||||+-.... ...++..|..+...|+| ..|+++..+
T Consensus 6 ~s~~~~iv~g----ky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y 79 (341)
T KOG1163|consen 6 GSLEELIVGG----KYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHY 79 (341)
T ss_pred cchhhheecc----ceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhh
Confidence 3445554443 47899999999999999999 7789999999865433 34578899999999975 779999999
Q ss_pred eecCCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeC---CCCCeEEc
Q 011184 122 CCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD---EDGNPRLS 198 (491)
Q Consensus 122 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~---~~~~~kl~ 198 (491)
..+.....+||+.+ |.||++++.- .+..++..+++-++-|++.-++|+|.++ .|||||||+|+|.. ....+.++
T Consensus 80 ~~e~~ynvlVMdLL-GPsLEdLfnf-C~R~ftmkTvLMLaDQml~RiEyvH~r~-fiHRDIKPdNFLMGlgrh~~kl~LI 156 (341)
T KOG1163|consen 80 GTEKDYNVLVMDLL-GPSLEDLFNF-CSRRFTMKTVLMLADQMLSRIEYVHLRN-FIHRDIKPDNFLMGLGRHCNKLYLI 156 (341)
T ss_pred ccccccceeeeecc-CccHHHHHHH-HhhhhhHHhHHHHHHHHHHHHHHHHhhc-cccccCCccceeeccccccceEEEE
Confidence 99999999999998 7999998754 5678999999999999999999999999 99999999999996 34568999
Q ss_pred cCCCcccCCC-----------CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhh--hccc
Q 011184 199 TFGLMKNSRD-----------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR--DRNL 265 (491)
Q Consensus 199 Dfgla~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~--~~~~ 265 (491)
|||+++...+ .....||..|.+--.+.+...+.+.|+-|+|.+|.++.-|..|+.+-...... -..+
T Consensus 157 DFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI 236 (341)
T KOG1163|consen 157 DFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKI 236 (341)
T ss_pred eccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHH
Confidence 9999986543 23557889999988888778899999999999999999999887654322111 1111
Q ss_pred cccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccC
Q 011184 266 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
.+..-..+...+....|.++.-.+..|-...-++-|...-+.+.+..+....
T Consensus 237 ~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~l 288 (341)
T KOG1163|consen 237 SEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTL 288 (341)
T ss_pred HHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhc
Confidence 2222222233455677789999999999999999999988888777666654
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=205.14 Aligned_cols=166 Identities=18% Similarity=0.149 Sum_probs=126.4
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCCccccCCC
Q 011184 138 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 217 (491)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t~~ 217 (491)
|||.+++.. ...++++..++.|+.||+.||.|||+.+ ||+|||++.++.+++ ||++....... ..||+.
T Consensus 1 GsL~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~~-------kp~Nil~~~~~~~~~--fG~~~~~~~~~-~~g~~~ 69 (176)
T smart00750 1 VSLADILEV-RGRPLNEEEIWAVCLQCLRALRELHRQA-------KSGNILLTWDGLLKL--DGSVAFKTPEQ-SRVDPY 69 (176)
T ss_pred CcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhcC-------CcccEeEcCccceee--ccceEeecccc-CCCccc
Confidence 789999964 2456999999999999999999999986 999999999999999 99987654433 367899
Q ss_pred CCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhh-Hhhhcccccccccccc-CCCCchhHH--HHHHHHHHhc
Q 011184 218 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLE-GQFTDDDGT--ELVRLASRCL 293 (491)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~li~~cl 293 (491)
|+|||++.+..++.++|||||||++|||++|+.|+...... ................ ...+...+. .+.+++.+||
T Consensus 70 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl 149 (176)
T smart00750 70 FMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCA 149 (176)
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHH
Confidence 99999999999999999999999999999999887543211 1111111111111000 011223333 6999999999
Q ss_pred cCCCCCCCChhHHHHHhcccc
Q 011184 294 QYEPRERPNPKSLVTALSPLQ 314 (491)
Q Consensus 294 ~~dp~~Rps~~~il~~L~~~~ 314 (491)
..+|.+||++.++++.+..+.
T Consensus 150 ~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 150 SRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred hcccccccCHHHHHHHHHHHH
Confidence 999999999999999876553
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.5e-25 Score=214.42 Aligned_cols=257 Identities=16% Similarity=0.164 Sum_probs=198.3
Q ss_pred cccccccCCCCCccEEEEEEECC--CCEEEEEEeCCCCCCChhHHHHHHHHHhccCC----CCcceEEeEe-ecCCeeEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLEN--QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRN----NRLTNLLGCC-CEGDERLL 130 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H----~niv~~~~~~-~~~~~~~l 130 (491)
.+.+...||+|+||.||.+.... ...+|+|............+..|+.++..+.+ +++..+++.. ..+...++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 67888899999999999999544 35789998866543333378889999999973 6899999998 57788999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCC-----CCeEEccCCCcc-
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-----GNPRLSTFGLMK- 204 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~-----~~~kl~Dfgla~- 204 (491)
||+.+ |.+|.++......+.++..+..+|+.|++.+|++||+.| ++||||||+|+++... ..+.|.|||+++
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G-~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~ 176 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG-FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARR 176 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC-cccCCcCHHHeeecCCCCcccceEEEEecCCCcc
Confidence 99998 799999886545578999999999999999999999999 9999999999999854 459999999998
Q ss_pred -cCC-C-----------CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccc
Q 011184 205 -NSR-D-----------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 271 (491)
Q Consensus 205 -~~~-~-----------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~ 271 (491)
... . .....||..|+++..+.+...+.+.|+||++.++.+++.|..|+........ ..........
T Consensus 177 ~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-~~~~~~~~~~ 255 (322)
T KOG1164|consen 177 FKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-KSKFEKDPRK 255 (322)
T ss_pred ccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-HHHHHHHhhh
Confidence 311 1 1124589999999999999999999999999999999999876543221100 0001111111
Q ss_pred cccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccC
Q 011184 272 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 272 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
.....+....+..+..+...+-..+...+|.+..+...|.......
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 256 LLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred hccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 1111023345567888888888899999999999999887776543
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.9e-26 Score=204.88 Aligned_cols=253 Identities=17% Similarity=0.198 Sum_probs=204.5
Q ss_pred ccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEEecCC
Q 011184 59 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
+++..+||.|+||+.+.|+ +-+++.||||.-...+ ..-++..|-...+.| ..++|..++-+..++.+..||+|.+
T Consensus 30 yrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL- 106 (449)
T KOG1165|consen 30 YRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL- 106 (449)
T ss_pred ceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-
Confidence 5677888999999999999 7789999999865433 455788899988888 5799999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC-----CeEEccCCCcccCCCC--
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-----NPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-----~~kl~Dfgla~~~~~~-- 209 (491)
|.||++++. +....++..++..++.|++.-++|+|++. +|.|||||+|+||..-+ .+.++|||+|+...+.
T Consensus 107 GPSLEDLFD-~CgR~FSvKTV~miA~Qmi~rie~vH~k~-LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~T 184 (449)
T KOG1165|consen 107 GPSLEDLFD-LCGRRFSVKTVAMIAKQMITRIEYVHEKD-LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKT 184 (449)
T ss_pred CcCHHHHHH-HhcCcccHHhHHHHHHHHHHHHHHHHhcc-eeecccCccceeecCCCCCCCceEEEEeccchhhhcCccc
Confidence 799999774 46789999999999999999999999998 99999999999997443 4899999999865432
Q ss_pred ---------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhh--ccccccccccccCCCC
Q 011184 210 ---------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD--RNLQMLTDSCLEGQFT 278 (491)
Q Consensus 210 ---------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 278 (491)
.+..||..||+--...+...+.+.|+-|||-|+.+.|-|..|+.+...+..+. ..+...........+.
T Consensus 185 kqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~Lc 264 (449)
T KOG1165|consen 185 KQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIEVLC 264 (449)
T ss_pred cccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHHHHH
Confidence 45679999999999999999999999999999999999998886643322111 1111112222223345
Q ss_pred chhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 279 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 279 ~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
.++|.++...+...-..+-.+-|.++-+...+..+...
T Consensus 265 ~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr 302 (449)
T KOG1165|consen 265 EGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDR 302 (449)
T ss_pred hcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHh
Confidence 56778999999999999999999998877776666554
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.3e-25 Score=210.93 Aligned_cols=165 Identities=17% Similarity=0.077 Sum_probs=125.5
Q ss_pred cccccccCCCCCccEEEEEEEC--CCCEEEEEEeCCCCC-----CChhHHHHHHHHHhccCCCCcce-EEeEeecCCeeE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE--NQRRIAVKRFNRMAW-----PDPRQFLEEARSVGQLRNNRLTN-LLGCCCEGDERL 129 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~-~~~~~~~~~~~~ 129 (491)
.|.+...||+|+||+||+|... +++.||||++..... .....+.+|+++|++++|+||+. ++++ +..+
T Consensus 19 ~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~~~~ 94 (365)
T PRK09188 19 RFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----GKDG 94 (365)
T ss_pred CceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----CCcE
Confidence 3566677799999999999853 577789998753211 12456899999999999999985 4432 4579
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccc-cccceeeCCCCCeEEccCCCcccCCC
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL-NAYRILFDEDGNPRLSTFGLMKNSRD 208 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dl-kp~Nill~~~~~~kl~Dfgla~~~~~ 208 (491)
|||||++|++|.. +. . .. ...++.|++.+|.|||+.+ |+|||| ||+|||++.++.++|+|||+++....
T Consensus 95 LVmE~~~G~~L~~-~~--~---~~---~~~~~~~i~~aL~~lH~~g-IiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~ 164 (365)
T PRK09188 95 LVRGWTEGVPLHL-AR--P---HG---DPAWFRSAHRALRDLHRAG-ITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRR 164 (365)
T ss_pred EEEEccCCCCHHH-hC--c---cc---hHHHHHHHHHHHHHHHHCC-CeeCCCCCcceEEEcCCCCEEEEECccceeccc
Confidence 9999999999963 21 1 11 1467889999999999999 999999 99999999999999999999986543
Q ss_pred CC------------ccccCCCCCCcccccCCC------CCCCccch
Q 011184 209 GK------------SYSTNLAFTPPEYLRTGR------VTPESVIY 236 (491)
Q Consensus 209 ~~------------~~~~t~~y~aPE~~~~~~------~~~~~Dv~ 236 (491)
.. ...+++.|++||.+.-.. .+..+|-|
T Consensus 165 ~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 165 RGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred CcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 21 234577899999886432 33446655
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-22 Score=196.65 Aligned_cols=247 Identities=23% Similarity=0.303 Sum_probs=192.4
Q ss_pred ccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCC---hhHHHHHHHHHhccCCC-CcceEEeEeecCCeeEEEEec
Q 011184 59 ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNN-RLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~H~-niv~~~~~~~~~~~~~lv~e~ 134 (491)
+.++..+|.|+||.||++... ..+++|.+....... ...+.+|+.++..+.|+ +|+++.+++......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 455677899999999999975 789999997654332 56799999999999988 799999999777778999999
Q ss_pred CCCCCHHHHhcccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC-CeEEccCCCcccCCC----
Q 011184 135 MPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRD---- 208 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~---- 208 (491)
+.++++.+++..... ..++......++.|++.++.|+|+.+ ++|||+||+||+++..+ .++++|||++.....
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~-~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG-IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 999999977753211 26889999999999999999999999 99999999999999888 799999999874432
Q ss_pred ------CCccccCCCCCCcccccC---CCCCCCccchhHHHHHHHHHhCCCCCCCchh----hHhhhccccccccccccC
Q 011184 209 ------GKSYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNLQMLTDSCLEG 275 (491)
Q Consensus 209 ------~~~~~~t~~y~aPE~~~~---~~~~~~~Dv~slG~vl~elltg~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 275 (491)
.....++..|++||.+.+ ...+...|+||+|++++++++|..|+..... ............. ....
T Consensus 159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 237 (384)
T COG0515 159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP-SLAS 237 (384)
T ss_pred ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc-cccc
Confidence 245568899999999987 5788999999999999999999988654432 1111111111110 0000
Q ss_pred CCC----chhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 276 QFT----DDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 276 ~~~----~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
... ......+.+++..|+..+|..|.+..+....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 238 PLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 111 1223578999999999999999988877654
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=3e-23 Score=184.23 Aligned_cols=140 Identities=16% Similarity=0.184 Sum_probs=109.6
Q ss_pred cccCCCCCccEEEEEEECCCCEEEEEEeCCCCCC--C-------hhH-----------------HHHHHHHHhccCCCCc
Q 011184 62 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP--D-------PRQ-----------------FLEEARSVGQLRNNRL 115 (491)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~-------~~~-----------------~~~E~~~l~~l~H~ni 115 (491)
.+.||.|++|.||+|...+|+.||||+++..... . ... ...|++++.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4678999999999999778999999999754321 1 112 2349999999988877
Q ss_pred ceEEeEeecCCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHH-HhCCCcccccccccceeeCCCCC
Q 011184 116 TNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYC-TSKGRALYHDLNAYRILFDEDGN 194 (491)
Q Consensus 116 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~L-H~~~~iiH~Dlkp~Nill~~~~~ 194 (491)
.....+... ..+|||||++|+++..... ...+++......++.|++.+|.++ |+.+ |+||||||+|||++ ++.
T Consensus 82 ~~p~~~~~~--~~~iVmE~i~g~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~l~H~~g-iiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 82 PCPEPILLK--SHVLVMEFIGDDGWAAPRL--KDAPLSESKARELYLQVIQIMRILYQDCR-LVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCCcEEEec--CCEEEEEEeCCCCCcchhh--hcCCCCHHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEE-CCc
Confidence 443333222 2389999999887765432 245788999999999999999999 6888 99999999999998 478
Q ss_pred eEEccCCCcccCC
Q 011184 195 PRLSTFGLMKNSR 207 (491)
Q Consensus 195 ~kl~Dfgla~~~~ 207 (491)
++|+|||++....
T Consensus 156 v~LiDFG~a~~~~ 168 (190)
T cd05147 156 LYIIDVSQSVEHD 168 (190)
T ss_pred EEEEEccccccCC
Confidence 9999999987543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.8e-23 Score=186.13 Aligned_cols=169 Identities=12% Similarity=0.082 Sum_probs=130.3
Q ss_pred cccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhH---------HHHHHHHHhccCCCCcceEEeEeecC---
Q 011184 58 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQ---------FLEEARSVGQLRNNRLTNLLGCCCEG--- 125 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~H~niv~~~~~~~~~--- 125 (491)
.++++..+|.|+||.||+... ++..+|||++.......... +.+|+..+.++.||+|..+..++...
T Consensus 32 ~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~ 110 (232)
T PRK10359 32 NIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERK 110 (232)
T ss_pred ceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccc
Confidence 466777789999999999655 56789999997654433332 68999999999999999999886533
Q ss_pred -----CeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccC
Q 011184 126 -----DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 200 (491)
Q Consensus 126 -----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 200 (491)
+..+|||||++|.+|.++.. ++. ....+++.+|..+|+.| ++|||+||+||+++.+| ++|+||
T Consensus 111 ~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~g-i~H~Dikp~Nili~~~g-i~liDf 178 (232)
T PRK10359 111 TLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHG-MVSGDPHKGNFIVSKNG-LRIIDL 178 (232)
T ss_pred cccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcC-CccCCCChHHEEEeCCC-EEEEEC
Confidence 35789999999999987642 232 24569999999999999 99999999999999988 999999
Q ss_pred CCcccCCCCCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh
Q 011184 201 GLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 247 (491)
Q Consensus 201 gla~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt 247 (491)
|........... ..+.....+..++|+||||+++..+..
T Consensus 179 g~~~~~~e~~a~--------d~~vler~y~~~~di~~lg~~~~~~~~ 217 (232)
T PRK10359 179 SGKRCTAQRKAK--------DRIDLERHYGIKNEIKDLGYYLLIYKK 217 (232)
T ss_pred CCcccccchhhH--------HHHHHHhHhcccccccceeEeehHHHH
Confidence 987654322211 012333446679999999998876543
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-23 Score=216.08 Aligned_cols=243 Identities=17% Similarity=0.126 Sum_probs=180.4
Q ss_pred cccCCCCCccEEEEEE-ECCCCEEEEEEeCCC--CCCChh----HHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 62 VSEHGEKAPNVVYKGK-LENQRRIAVKRFNRM--AWPDPR----QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 62 i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~----~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
...+|.|++|.|+... .......+.|.+... ...... .+..|.-+-..++|||++..+..+.+.....-+|||
T Consensus 323 ~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~ 402 (601)
T KOG0590|consen 323 GRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEY 402 (601)
T ss_pred cceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhhc
Confidence 3456999999887777 333455555554311 111111 255677777888999998888877776666666999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-----
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 209 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----- 209 (491)
|++ +|..++.. ...+....+-.++.|++.|+.|+|+.| +.|||+|++|++++.+|.+||+|||.+..+...
T Consensus 403 ~~~-Dlf~~~~~--~~~~~~~e~~c~fKqL~~Gv~y~h~~G-iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~ 478 (601)
T KOG0590|consen 403 CPY-DLFSLVMS--NGKLTPLEADCFFKQLLRGVKYLHSMG-LAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNI 478 (601)
T ss_pred ccH-HHHHHHhc--ccccchhhhhHHHHHHHHHHHHHHhcC-ceeccCccccEEEecCCceEEeecCcceeeccCcchhh
Confidence 998 99999863 346888889999999999999999999 999999999999999999999999988754322
Q ss_pred ---CccccCCCCCCcccccCCCCCC-CccchhHHHHHHHHHhCCCCCCCchhhHhh--h-ccccccccccccCCCCchhH
Q 011184 210 ---KSYSTNLAFTPPEYLRTGRVTP-ESVIYSFGTLLLDLLSGKHIPPSHALDLIR--D-RNLQMLTDSCLEGQFTDDDG 282 (491)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~~~~~~-~~Dv~slG~vl~elltg~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~ 282 (491)
....|+-.|+|||.+.+..|.+ ..||||.|+++..|++|+.|+-........ . ..............+...++
T Consensus 479 ~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp 558 (601)
T KOG0590|consen 479 HESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLP 558 (601)
T ss_pred hhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhch
Confidence 2456888999999999988876 699999999999999998776332211110 0 00111111111122334567
Q ss_pred HHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 283 TELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 283 ~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
...+.+|.++|+.||.+|.|+++|++
T Consensus 559 ~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 559 RETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred hhHHHHHHHHccCChhheecHHHHhh
Confidence 88999999999999999999999997
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.88 E-value=5e-22 Score=177.19 Aligned_cols=141 Identities=15% Similarity=0.187 Sum_probs=111.9
Q ss_pred cccCCCCCccEEEEEEECCCCEEEEEEeCCCCCC---------------------C-----hhHHHHHHHHHhccCCCCc
Q 011184 62 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP---------------------D-----PRQFLEEARSVGQLRNNRL 115 (491)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------------------~-----~~~~~~E~~~l~~l~H~ni 115 (491)
.+.||+|++|.||+|...+|+.||||+++..... . ...+.+|.+.+.++.|++|
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4678999999999999768999999999764321 0 1123578999999999988
Q ss_pred ceEEeEeecCCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccccceeeCCCCC
Q 011184 116 TNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGN 194 (491)
Q Consensus 116 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~~ 194 (491)
.....+.... .+|||||++|+++..... ....++......++.|++.+|.++|+ .| |+||||||+|||++ ++.
T Consensus 82 ~~p~~~~~~~--~~lVmE~~~g~~~~~~~l--~~~~~~~~~~~~i~~~l~~~l~~lH~~~g-ivHrDlkP~NIll~-~~~ 155 (190)
T cd05145 82 PVPEPILLKK--NVLVMEFIGDDGSPAPRL--KDVPLEEEEAEELYEQVVEQMRRLYQEAG-LVHGDLSEYNILYH-DGK 155 (190)
T ss_pred CCceEEEecC--CEEEEEEecCCCchhhhh--hhccCCHHHHHHHHHHHHHHHHHHHHhCC-EecCCCChhhEEEE-CCC
Confidence 5544443332 489999999886543322 23567888999999999999999999 88 99999999999999 889
Q ss_pred eEEccCCCcccCCC
Q 011184 195 PRLSTFGLMKNSRD 208 (491)
Q Consensus 195 ~kl~Dfgla~~~~~ 208 (491)
++|+|||++.....
T Consensus 156 ~~liDFG~a~~~~~ 169 (190)
T cd05145 156 PYIIDVSQAVELDH 169 (190)
T ss_pred EEEEEcccceecCC
Confidence 99999999876543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=4e-23 Score=202.38 Aligned_cols=224 Identities=18% Similarity=0.214 Sum_probs=186.3
Q ss_pred CCCCCccEEEEEEE----CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccC-CCCcceEEeEeecCCeeEEEEecCCC
Q 011184 65 HGEKAPNVVYKGKL----ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVAEYMPN 137 (491)
Q Consensus 65 lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~~lv~e~~~~ 137 (491)
+|.|++|.|+++.. +.|.-+|+|++++.... .......|..++..++ ||.+|++...+..+...++++++..|
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 68999999998762 34778999998754322 2225667888999996 99999999999999999999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCCccccCCC
Q 011184 138 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 217 (491)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t~~ 217 (491)
|.|...+. ....+.+.....+...++-++.++|+.+ ++|||+|++||+++.+|.+++.|||+++........+||..
T Consensus 82 g~lft~l~--~~~~f~~~~~~~~~aelaLald~lh~l~-iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~e 158 (612)
T KOG0603|consen 82 GDLFTRLS--KEVMFDELDVAFYLAELALALDHLHKLG-IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYE 158 (612)
T ss_pred chhhhccc--cCCchHHHHHHHHHHHHHHHHhhcchhH-HHHhcccccceeecccCccccCCchhhhHhHhhhhcccchh
Confidence 99988886 3456777888888999999999999999 99999999999999999999999999998776666699999
Q ss_pred CCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCCC
Q 011184 218 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 297 (491)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp 297 (491)
|||||++. .....+|.||||++++||+||..||..+....+ .. .....|..++..+.+++..++..+|
T Consensus 159 ymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~~~~~I--------l~--~~~~~p~~l~~~a~~~~~~l~~r~p 226 (612)
T KOG0603|consen 159 YRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGDTMKRI--------LK--AELEMPRELSAEARSLFRQLFKRNP 226 (612)
T ss_pred hhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchHHHHHH--------hh--hccCCchhhhHHHHHHHHHHHhhCH
Confidence 99999998 677899999999999999999988876222111 11 1224567788899999999999999
Q ss_pred CCCCCh
Q 011184 298 RERPNP 303 (491)
Q Consensus 298 ~~Rps~ 303 (491)
..|.-.
T Consensus 227 ~nrLg~ 232 (612)
T KOG0603|consen 227 ENRLGA 232 (612)
T ss_pred HHHhcc
Confidence 999543
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.3e-21 Score=166.78 Aligned_cols=180 Identities=17% Similarity=0.142 Sum_probs=137.6
Q ss_pred ccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCC----hhHHHHHHHHHhccC-CCCcceEEeEeecCCeeEEEEecC
Q 011184 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD----PRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
+...|++|+||+||.+.- .+.+++.+.+....+-. ...+.+|+++|++|. |++|++++++ +..+++|||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 345679999999996655 67888888887654421 125789999999995 5889999886 3469999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccc-cccceeeCCCCCeEEccCCCcccCCCCCc---
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL-NAYRILFDEDGNPRLSTFGLMKNSRDGKS--- 211 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dl-kp~Nill~~~~~~kl~Dfgla~~~~~~~~--- 211 (491)
.|.+|...+. .. ...++.|++.+|.++|+.| |+|||| ||+|||++.++.++|+|||++........
T Consensus 81 ~G~~L~~~~~---~~------~~~~~~qi~~~L~~lH~~G-IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r 150 (218)
T PRK12274 81 AGAAMYQRPP---RG------DLAYFRAARRLLQQLHRCG-VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMR 150 (218)
T ss_pred cCccHHhhhh---hh------hHHHHHHHHHHHHHHHHCc-CccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHH
Confidence 9999975442 11 1356789999999999999 999999 79999999999999999999986543321
Q ss_pred --------------cccCCCCCCcccccCC-CCC-CCccchhHHHHHHHHHhCCCCCCCc
Q 011184 212 --------------YSTNLAFTPPEYLRTG-RVT-PESVIYSFGTLLLDLLSGKHIPPSH 255 (491)
Q Consensus 212 --------------~~~t~~y~aPE~~~~~-~~~-~~~Dv~slG~vl~elltg~~~~~~~ 255 (491)
...++.|++|+..... ..+ ...+.++-|..+|.++|++.+..++
T Consensus 151 ~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 151 LLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 0135677788754332 233 5678889999999999999776543
|
|
| >KOG0553 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.2e-21 Score=173.08 Aligned_cols=112 Identities=24% Similarity=0.297 Sum_probs=107.1
Q ss_pred hhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHH
Q 011184 377 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 456 (491)
Q Consensus 377 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 456 (491)
+....++.++.+|+.+++.++|++|+..|++||+++|+ ++.+|.|||.+|.++|+|+.|++||+.||.+||.+.++|-+
T Consensus 76 e~~~~AE~LK~eGN~~m~~~~Y~eAv~kY~~AI~l~P~-nAVyycNRAAAy~~Lg~~~~AVkDce~Al~iDp~yskay~R 154 (304)
T KOG0553|consen 76 EDKALAESLKNEGNKLMKNKDYQEAVDKYTEAIELDPT-NAVYYCNRAAAYSKLGEYEDAVKDCESALSIDPHYSKAYGR 154 (304)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHhcchHHHHHHHHHHHhcChHHHHHHHH
Confidence 35577899999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCChHHHHHHHHHHHccccccccccc
Q 011184 457 QAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 489 (491)
Q Consensus 457 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~ 489 (491)
+|.+|+.+|+|++|+++|++||+|||.+...++
T Consensus 155 LG~A~~~~gk~~~A~~aykKaLeldP~Ne~~K~ 187 (304)
T KOG0553|consen 155 LGLAYLALGKYEEAIEAYKKALELDPDNESYKS 187 (304)
T ss_pred HHHHHHccCcHHHHHHHHHhhhccCCCcHHHHH
Confidence 999999999999999999999999999986543
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.4e-22 Score=202.66 Aligned_cols=241 Identities=18% Similarity=0.231 Sum_probs=174.0
Q ss_pred cccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCC-CChhHHHHHHHH--HhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 58 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAW-PDPRQFLEEARS--VGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~--l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
+....+.||++-|=.|.+|+.+.|. |+||++-+... -..+.|.++++- ...++|||++.+.-+-..+.-.|||-+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 3445678899999999999988876 99999855442 234444443333 4455899999999887777788999999
Q ss_pred CCCCCHHHHhcccCCCC-CCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC----CC
Q 011184 135 MPNETLAKHLFHWETHP-MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR----DG 209 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~-l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~----~~ 209 (491)
+. .+|++.+. .++ +...+..-|+.|++.||..+|..| |+|||||.+||||+..+.+.|+||.--+..- +.
T Consensus 103 vk-hnLyDRlS---TRPFL~~iEKkWiaFQLL~al~qcH~~g-VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNP 177 (1431)
T KOG1240|consen 103 VK-HNLYDRLS---TRPFLVLIEKKWIAFQLLKALSQCHKLG-VCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNP 177 (1431)
T ss_pred Hh-hhhhhhhc---cchHHHHHHHHHHHHHHHHHHHHHHHcC-ccccccccceEEEeeechhhhhcccccCCccCCCCCc
Confidence 96 79999994 444 455677778999999999999999 9999999999999999999999998665421 11
Q ss_pred Ccc-------ccCCCCCCcccccCC----------C-CCCCccchhHHHHHHHHHhC-CCCCCCchhhHhhhcccccccc
Q 011184 210 KSY-------STNLAFTPPEYLRTG----------R-VTPESVIYSFGTLLLDLLSG-KHIPPSHALDLIRDRNLQMLTD 270 (491)
Q Consensus 210 ~~~-------~~t~~y~aPE~~~~~----------~-~~~~~Dv~slG~vl~elltg-~~~~~~~~~~~~~~~~~~~~~~ 270 (491)
..+ ..-..|.|||.+-.. . .+++.||||+||++.||++- ++||.-...-..+.+. .....
T Consensus 178 adf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~-~~~~e 256 (1431)
T KOG1240|consen 178 ADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGN-ADDPE 256 (1431)
T ss_pred ccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccC-ccCHH
Confidence 111 122469999977431 2 67899999999999999986 5444322111122111 10010
Q ss_pred ccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 271 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 271 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
..+ ..+. +..++.++..|++.||.+|.++++.|+.
T Consensus 257 ~~L-e~Ie---d~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 257 QLL-EKIE---DVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHH-HhCc---CccHHHHHHHHHccCchhccCHHHHHHh
Confidence 001 1111 1378999999999999999999999976
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.4e-20 Score=168.52 Aligned_cols=132 Identities=15% Similarity=0.137 Sum_probs=104.3
Q ss_pred ccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhcc-----CCCCcceEEeEeecCC---e-eEEEEe
Q 011184 63 SEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-----RNNRLTNLLGCCCEGD---E-RLLVAE 133 (491)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~H~niv~~~~~~~~~~---~-~~lv~e 133 (491)
..||+|++|.||. .-.++.. +||++........+.+.+|+.+++.+ .||||++++|++.++. . +.+|+|
T Consensus 8 ~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e 85 (210)
T PRK10345 8 SPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIAD 85 (210)
T ss_pred ceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEec
Confidence 4569999999996 3223444 69998765444567899999999999 5799999999998863 3 337899
Q ss_pred c--CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHH-HHHHhCCCcccccccccceeeCC----CCCeEEccCCC
Q 011184 134 Y--MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQAL-EYCTSKGRALYHDLNAYRILFDE----DGNPRLSTFGL 202 (491)
Q Consensus 134 ~--~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L-~~LH~~~~iiH~Dlkp~Nill~~----~~~~kl~Dfgl 202 (491)
| ++++||.+++.. ..+++. ..++.+++.++ +|||+++ |+||||||+|||++. +++++|+||+-
T Consensus 86 ~~G~~~~tL~~~l~~---~~~~e~--~~~~~~~L~~l~~yLh~~~-IvhrDlKp~NILl~~~~~~~~~~~LiDg~G 155 (210)
T PRK10345 86 FDGKPSITLTEFAEQ---CRYEED--VAQLRQLLKKLKRYLLDNR-IVTMELKPQNILCQRISESEVIPVVCDNIG 155 (210)
T ss_pred CCCCcchhHHHHHHc---ccccHh--HHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence 9 667999999953 345555 35678888888 9999998 999999999999973 34799999543
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.3e-21 Score=178.04 Aligned_cols=229 Identities=21% Similarity=0.199 Sum_probs=146.5
Q ss_pred cccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC---CChhHHHHHHHHHhccCC----------CCcceEEeEe---
Q 011184 60 NIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRN----------NRLTNLLGCC--- 122 (491)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H----------~niv~~~~~~--- 122 (491)
.....||.|+++.||.++. .+|+.+|||++..... ...+++.+|.-....+.+ -.++--++..
T Consensus 15 ~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~ 94 (288)
T PF14531_consen 15 VRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIP 94 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEET
T ss_pred EEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEc
Confidence 3445679999999999995 4599999999854332 224567777655555433 1111111111
Q ss_pred ------ecC---C-----eeEEEEecCCCCCHHHHhcc---cCCC--CCCHHHHHHHHHHHHHHHHHHHhCCCccccccc
Q 011184 123 ------CEG---D-----ERLLVAEYMPNETLAKHLFH---WETH--PMKWAMRLRVVLHLAQALEYCTSKGRALYHDLN 183 (491)
Q Consensus 123 ------~~~---~-----~~~lv~e~~~~gsL~~~l~~---~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlk 183 (491)
... . ..+++|+-+. ++|.+++.- .... .+....++.+..|+++.+++||+.| ++|+||+
T Consensus 95 ~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G-lVHgdi~ 172 (288)
T PF14531_consen 95 GKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG-LVHGDIK 172 (288)
T ss_dssp TS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-EEEST-S
T ss_pred CCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc-eEecccc
Confidence 111 1 2367888885 888887642 1111 2334556777899999999999999 9999999
Q ss_pred ccceeeCCCCCeEEccCCCcccCCCCCc-cccCCCCCCcccccCC--------CCCCCccchhHHHHHHHHHhCCCCCCC
Q 011184 184 AYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAFTPPEYLRTG--------RVTPESVIYSFGTLLLDLLSGKHIPPS 254 (491)
Q Consensus 184 p~Nill~~~~~~kl~Dfgla~~~~~~~~-~~~t~~y~aPE~~~~~--------~~~~~~Dv~slG~vl~elltg~~~~~~ 254 (491)
|+|++++.+|.+.|+||+.......... ...+..|.+||..... .++.+.|.|+||+++|.|+++..|+..
T Consensus 173 ~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~ 252 (288)
T PF14531_consen 173 PENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGL 252 (288)
T ss_dssp GGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCC
T ss_pred eeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCC
Confidence 9999999999999999997665444322 3445779999976432 478899999999999999999988764
Q ss_pred chhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCCCCCC
Q 011184 255 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 300 (491)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R 300 (491)
......... ....+. ++|+.++.||..+|+.||.+|
T Consensus 253 ~~~~~~~~~---------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 253 SSPEADPEW---------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp CGGGSTSGG---------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred CCccccccc---------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 432211111 122334 788999999999999999987
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.1e-21 Score=187.27 Aligned_cols=208 Identities=22% Similarity=0.341 Sum_probs=159.6
Q ss_pred HhccCCCCcceEEeEeecCCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccc
Q 011184 107 VGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 186 (491)
Q Consensus 107 l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~N 186 (491)
|+.+.|.|+.+++|.+.++...++|.+||..|+|.+.+.. ....+++-....++++|+.||.|||+.....|+.+++.|
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n 79 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN 79 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence 4578999999999999999999999999999999999975 346788888899999999999999997623899999999
Q ss_pred eeeCCCCCeEEccCCCcccCCC------CCccccCCCCCCcccccCCC-------CCCCccchhHHHHHHHHHhCCCCCC
Q 011184 187 ILFDEDGNPRLSTFGLMKNSRD------GKSYSTNLAFTPPEYLRTGR-------VTPESVIYSFGTLLLDLLSGKHIPP 253 (491)
Q Consensus 187 ill~~~~~~kl~Dfgla~~~~~------~~~~~~t~~y~aPE~~~~~~-------~~~~~Dv~slG~vl~elltg~~~~~ 253 (491)
.++|..+.+||+|||+...... .........|.|||.+.+.. .+.+.||||||++++|+++.+.|+.
T Consensus 80 Clvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~ 159 (484)
T KOG1023|consen 80 CLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFD 159 (484)
T ss_pred ceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccc
Confidence 9999999999999999776532 11112345799999998642 4668999999999999999998886
Q ss_pred CchhhHhhhccccccc---cccccCCCC--chhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 254 SHALDLIRDRNLQMLT---DSCLEGQFT--DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 254 ~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
..............+. .....+... ...++++..++..||..+|..||+++.+-..++.+..
T Consensus 160 ~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 160 LRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred cccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 5321111011111111 111111111 1344579999999999999999999999998877754
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.2e-20 Score=172.90 Aligned_cols=191 Identities=17% Similarity=0.203 Sum_probs=143.6
Q ss_pred CCCCcceEEeEeec---------------------------CCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHH
Q 011184 111 RNNRLTNLLGCCCE---------------------------GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLH 163 (491)
Q Consensus 111 ~H~niv~~~~~~~~---------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~q 163 (491)
+|||||++.++|.+ +...|+||.-.+ .||+.++. ....+.....-++.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~---~~~~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLW---TRHRSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHh---cCCCchHHHHHHHHH
Confidence 59999999988743 234789999886 89999994 456677777888999
Q ss_pred HHHHHHHHHhCCCcccccccccceee--CCCC--CeEEccCCCcccCC----------CCCccccCCCCCCcccccCCC-
Q 011184 164 LAQALEYCTSKGRALYHDLNAYRILF--DEDG--NPRLSTFGLMKNSR----------DGKSYSTNLAFTPPEYLRTGR- 228 (491)
Q Consensus 164 i~~~L~~LH~~~~iiH~Dlkp~Nill--~~~~--~~kl~Dfgla~~~~----------~~~~~~~t~~y~aPE~~~~~~- 228 (491)
+++|+.|||.+| |.|||+|++|||+ |+++ .+.|+|||.+--.. ......|.-.-||||+....+
T Consensus 350 lLEav~hL~~hg-vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PG 428 (598)
T KOG4158|consen 350 LLEAVTHLHKHG-VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPG 428 (598)
T ss_pred HHHHHHHHHHcc-chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCC
Confidence 999999999999 9999999999999 4444 47899999653221 122335667789999886432
Q ss_pred -----CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCCh
Q 011184 229 -----VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 303 (491)
Q Consensus 229 -----~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~ 303 (491)
--.++|.|+.|.+.||+++...||............+++ ...+.++..+++.+++++...|+.||++|++.
T Consensus 429 p~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe----~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp 504 (598)
T KOG4158|consen 429 PNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQE----SQLPALPSRVPPVARQLVFDLLKRDPSKRVSP 504 (598)
T ss_pred CceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhh----hhCCCCcccCChHHHHHHHHHhcCCccccCCc
Confidence 124899999999999999999999764322222222221 11234566778899999999999999999987
Q ss_pred hHHHHHh
Q 011184 304 KSLVTAL 310 (491)
Q Consensus 304 ~~il~~L 310 (491)
.-....|
T Consensus 505 ~iAANvl 511 (598)
T KOG4158|consen 505 NIAANVL 511 (598)
T ss_pred cHHHhHH
Confidence 6655544
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.1e-19 Score=190.63 Aligned_cols=239 Identities=18% Similarity=0.170 Sum_probs=173.8
Q ss_pred ccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccC---CCCcceEEeEeecCCeeEEEEecC
Q 011184 59 ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR---NNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
+.|-..+|.|++|+||+|...+|+.||+|+-+... ..+|.-=.+++.+|+ -+.|..+..+..-.+..+||+||.
T Consensus 700 ~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~---~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~ 776 (974)
T KOG1166|consen 700 FCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPN---PWEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYS 776 (974)
T ss_pred EEEEeeeccccceEEEEeecCCCcEEEEEeecCCC---ceeeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeecc
Confidence 34446779999999999997789999999976543 233443445555665 345666666666677789999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeC-------CCCCeEEccCCCccc---
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-------EDGNPRLSTFGLMKN--- 205 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~-------~~~~~kl~Dfgla~~--- 205 (491)
+.|||.+++. ..+.+++..++.++.|++..++.||..+ |||+||||+|+||. ++--++|+|||.+..
T Consensus 777 ~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~~-IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~l 853 (974)
T KOG1166|consen 777 PYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAMG-IIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKL 853 (974)
T ss_pred ccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhcc-eecccCCcceeEeecccCCCCcccceEEEecccceeeeE
Confidence 9999999997 5677999999999999999999999998 99999999999994 233489999998753
Q ss_pred CCCCC---ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhH
Q 011184 206 SRDGK---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 282 (491)
Q Consensus 206 ~~~~~---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (491)
+.++. ...+|-.+-.+|+..|.+++...|.|.|+.+++.|+.|+..- ...+....+... ++....
T Consensus 854 fp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q-------~~~g~~~~~~~~-----~~Ry~~ 921 (974)
T KOG1166|consen 854 FPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME-------VKNGSSWMVKTN-----FPRYWK 921 (974)
T ss_pred cCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH-------hcCCcceecccc-----chhhhh
Confidence 34443 335678899999999999999999999999999999998421 111111111111 111111
Q ss_pred -HHHHHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 283 -TELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 283 -~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
.-...|...+|..|-..=|...++...++.+..
T Consensus 922 ~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~ 955 (974)
T KOG1166|consen 922 RDMWNKFFDLLLNPDCDTLPNLQELRTELEEVLA 955 (974)
T ss_pred HHHHHHHHHHHhCcCcccchhHHHHHHHHHHHHH
Confidence 234566777777333333777777777765543
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.3e-19 Score=163.78 Aligned_cols=155 Identities=14% Similarity=0.115 Sum_probs=115.8
Q ss_pred HHHHHHHhcCCccccccccCCCCCccEEEEEE--ECCCCEEEEEEeCCCCCC-------------------C-----hhH
Q 011184 46 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGK--LENQRRIAVKRFNRMAWP-------------------D-----PRQ 99 (491)
Q Consensus 46 ~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~-------------------~-----~~~ 99 (491)
..++....+.=..+.+.+.||.|++|.||+|+ ..+|+.||||+++..... . ...
T Consensus 17 ~~~~~~~~~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (237)
T smart00090 17 RLALYSLLNRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLW 96 (237)
T ss_pred HHHHHHHHhcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHH
Confidence 33443333333356777888999999999998 567999999998753210 0 023
Q ss_pred HHHHHHHHhccCCC--CcceEEeEeecCCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCc
Q 011184 100 FLEEARSVGQLRNN--RLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA 177 (491)
Q Consensus 100 ~~~E~~~l~~l~H~--niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~i 177 (491)
+.+|+.++.++.+. .++++++. ...++||||++|++|..... ....+.......++.||+.+|.+||+.+.+
T Consensus 97 ~~~E~~~L~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~g~i 170 (237)
T smart00090 97 AEKEFRNLQRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRL--KDVEPEEEEEFELYDDILEEMRKLYKEGEL 170 (237)
T ss_pred HHHHHHHHHHHHhcCCCCCeeeEe----cCceEEEEEecCCccccccc--ccCCcchHHHHHHHHHHHHHHHHHHhcCCE
Confidence 56899999999753 34455543 23489999999988876542 233456666789999999999999998669
Q ss_pred ccccccccceeeCCCCCeEEccCCCcccCC
Q 011184 178 LYHDLNAYRILFDEDGNPRLSTFGLMKNSR 207 (491)
Q Consensus 178 iH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 207 (491)
+||||||+||+++ ++.++|+|||.+....
T Consensus 171 iH~Dikp~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 171 VHGDLSEYNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred EeCCCChhhEEEE-CCCEEEEEChhhhccC
Confidence 9999999999999 8899999999887543
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.5e-19 Score=160.38 Aligned_cols=134 Identities=17% Similarity=0.211 Sum_probs=112.8
Q ss_pred ccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCC--------hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 63 SEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--------PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
..||+|++|.||+|.. .|..|+||+........ ...+.+|+.++..+.|++|+....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 4679999999999987 66789999876433221 13577899999999999988877777777788999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCccc
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 205 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 205 (491)
++|++|.+.+.. . .. .+..++.+++.+|.++|+.+ ++|+|++|.|||++ ++.++|+|||.+..
T Consensus 81 ~~G~~L~~~~~~---~--~~-~~~~i~~~i~~~l~~lH~~~-i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINS---N--GM-EELELSREIGRLVGKLHSAG-IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHh---c--cH-HHHHHHHHHHHHHHHHHhCC-cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 999999998852 1 12 78899999999999999999 99999999999999 78899999998764
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.6e-18 Score=156.21 Aligned_cols=129 Identities=18% Similarity=0.246 Sum_probs=105.8
Q ss_pred CCCCCccEEEEEEECCCCEEEEEEeCCCCCCC--------hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 65 HGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--------PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 65 lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
||+|++|.||++.+ ++..|++|+........ ...+.+|++++..++|+++.....++...+..++||||++
T Consensus 2 ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~ 80 (199)
T TIGR03724 2 IAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE 80 (199)
T ss_pred CCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence 69999999999996 56889999865432211 2457789999999998876655555556667799999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCccc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 205 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 205 (491)
|++|.+.+.. ... .++.+++.+|.+||+.+ ++|+|++|.||+++ ++.++++|||++..
T Consensus 81 g~~l~~~~~~---~~~------~~~~~i~~~l~~lH~~g-i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 81 GKPLKDVIEE---GND------ELLREIGRLVGKLHKAG-IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CccHHHHHhh---cHH------HHHHHHHHHHHHHHHCC-eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999988742 111 78999999999999999 99999999999999 88999999998765
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.1e-17 Score=150.55 Aligned_cols=137 Identities=15% Similarity=0.162 Sum_probs=107.2
Q ss_pred ccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCC----------------------ChhHHHHHHHHHhccCCCC--
Q 011184 59 ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP----------------------DPRQFLEEARSVGQLRNNR-- 114 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~~l~H~n-- 114 (491)
+.+...||.|+||.||++...+|+.||||++...... ....+.+|..++..+.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 4445677999999999999878999999987643210 0113667899999998874
Q ss_pred cceEEeEeecCCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCC
Q 011184 115 LTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 194 (491)
Q Consensus 115 iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~ 194 (491)
++..++. ...++||||++|++|..... ......++.+++.++.++|+.+ ++||||||+||+++.++.
T Consensus 97 v~~~~~~----~~~~lv~e~~~g~~L~~~~~--------~~~~~~~~~~i~~~l~~lh~~g-i~H~Dl~p~Nill~~~~~ 163 (198)
T cd05144 97 VPKPIDW----NRHAVVMEYIDGVELYRVRV--------LEDPEEVLDEILEEIVKAYKHG-IIHGDLSEFNILVDDDEK 163 (198)
T ss_pred CCceeec----CCceEEEEEeCCcchhhccc--------cccHHHHHHHHHHHHHHHHHCC-CCcCCCCcccEEEcCCCc
Confidence 4555442 34589999999999976542 0234678899999999999998 999999999999999999
Q ss_pred eEEccCCCcccCCC
Q 011184 195 PRLSTFGLMKNSRD 208 (491)
Q Consensus 195 ~kl~Dfgla~~~~~ 208 (491)
++|+|||++.....
T Consensus 164 ~~liDfg~~~~~~~ 177 (198)
T cd05144 164 IYIIDWPQMVSTDH 177 (198)
T ss_pred EEEEECCccccCCC
Confidence 99999999865443
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=9.8e-18 Score=173.36 Aligned_cols=132 Identities=20% Similarity=0.220 Sum_probs=107.4
Q ss_pred cccCCCCCccEEEEEEECCCCEEEEEEe-CCCCC-C------ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 62 VSEHGEKAPNVVYKGKLENQRRIAVKRF-NRMAW-P------DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~~~~vavK~~-~~~~~-~------~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
...||+|+||+||++.+.+. .+++|+. ..... . ..+.+.+|++++..++|++++....++......++|||
T Consensus 338 ~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E 416 (535)
T PRK09605 338 DHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVME 416 (535)
T ss_pred cceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEE
Confidence 45679999999999997544 3444443 22111 1 12458899999999999999988888777777899999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccC
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 206 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 206 (491)
|++|++|.+++. ....++.+++.+|.+||+.+ ++||||||+|||+ .++.++|+|||+++..
T Consensus 417 ~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~g-iiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 417 YIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAG-IVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred ecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCC-CccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 999999999883 35678999999999999999 9999999999999 6788999999998753
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.6e-19 Score=170.20 Aligned_cols=166 Identities=25% Similarity=0.373 Sum_probs=124.9
Q ss_pred eeEEEEecCCCCCHHHHhcccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCccc
Q 011184 127 ERLLVAEYMPNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 205 (491)
Q Consensus 127 ~~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 205 (491)
..+|.|++|.-.+|.+++.+.. ....++.....++.|++.|+.| ++ .+|+|+||.||....+.++||.|||+...
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~-~ihrdlkp~nif~~~d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG-LIHRDLKPSNIFFSDDDQLKIGDFGLVTS 405 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc-chhhhccccccccccchhhhhhhhhheee
Confidence 4789999999999999997433 3456788889999999999999 77 99999999999999999999999999765
Q ss_pred CCCC----------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhC-CCCCC-CchhhHhhhccccccccccc
Q 011184 206 SRDG----------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG-KHIPP-SHALDLIRDRNLQMLTDSCL 273 (491)
Q Consensus 206 ~~~~----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg-~~~~~-~~~~~~~~~~~~~~~~~~~~ 273 (491)
.... ....||..||+||.+.+..|+.++||||||++|+|++.- ...+. ......++.+. +++
T Consensus 406 ~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r~g~----ip~-- 479 (516)
T KOG1033|consen 406 QDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIATLTDIRDGI----IPP-- 479 (516)
T ss_pred cccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhhcCC----CCh--
Confidence 4332 234689999999999999999999999999999999982 11111 11111122111 111
Q ss_pred cCCCCchhHHHHHHHHHHhccCCCCCCCChhH
Q 011184 274 EGQFTDDDGTELVRLASRCLQYEPRERPNPKS 305 (491)
Q Consensus 274 ~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~ 305 (491)
.+..+. +.-..|+.+++.+.|.+||++.+
T Consensus 480 --~~~~d~-p~e~~ll~~lls~~p~~RP~~~~ 508 (516)
T KOG1033|consen 480 --EFLQDY-PEEYTLLQQLLSPSPEERPSAIE 508 (516)
T ss_pred --HHhhcC-cHHHHHHHHhcCCCcccCchHHH
Confidence 111111 34568999999999999994443
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.1e-18 Score=177.68 Aligned_cols=201 Identities=19% Similarity=0.188 Sum_probs=144.3
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
+.+.|+.+..|++|-||..+++ +.+++|+| +++.. .+.+- ++.....|.+|
T Consensus 84 df~~IklisngAygavylvrh~~trqrfa~k-iNkq~-----lilRn--ilt~a~npfvv-------------------- 135 (1205)
T KOG0606|consen 84 DFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQN-----LILRN--ILTFAGNPFVV-------------------- 135 (1205)
T ss_pred ccceeEeeccCCCCceeeeeccccccchhhc-ccccc-----hhhhc--cccccCCccee--------------------
Confidence 3456667799999999999864 46789984 43322 11111 33333344433
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC--------
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-------- 208 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-------- 208 (491)
|+-...+. ..++++.. ++.+++|||+.+ |+|||+||+|.+|+.-|.+|+.|||+++....
T Consensus 136 -gDc~tllk--~~g~lPvd--------mvla~Eylh~yg-ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~e 203 (1205)
T KOG0606|consen 136 -GDCATLLK--NIGPLPVD--------MVLAVEYLHSYG-IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKE 203 (1205)
T ss_pred -chhhhhcc--cCCCCcch--------hhHHhHhhccCC-eecCCCCCCcceeeecccccccchhhhhhhhhhccchhhh
Confidence 44444443 23444432 278899999999 99999999999999999999999998764211
Q ss_pred -----------CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCC
Q 011184 209 -----------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 277 (491)
Q Consensus 209 -----------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (491)
....+||+.|.|||++....|....|.|++|+++||.+.|..||.++..+.+-...+.. .....+-
T Consensus 204 g~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd---~i~wpE~ 280 (1205)
T KOG0606|consen 204 GHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISD---DIEWPEE 280 (1205)
T ss_pred cchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhh---hcccccc
Confidence 12457899999999999999999999999999999999999999888554433322222 1122222
Q ss_pred CchhHHHHHHHHHHhccCCCCCCC
Q 011184 278 TDDDGTELVRLASRCLQYEPRERP 301 (491)
Q Consensus 278 ~~~~~~~~~~li~~cl~~dp~~Rp 301 (491)
....++++++++.++|+.+|..|-
T Consensus 281 dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 281 DEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred CcCCCHHHHHHHHHHHHhChHhhc
Confidence 445668999999999999999994
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.8e-17 Score=140.22 Aligned_cols=133 Identities=15% Similarity=0.047 Sum_probs=112.5
Q ss_pred cccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCC--CCcceEEeEeecCCeeEEEEecCCCCC
Q 011184 62 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRN--NRLTNLLGCCCEGDERLLVAEYMPNET 139 (491)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~~~~~~~~~~~~~lv~e~~~~gs 139 (491)
++.+|.|.++.||++...+ ..+++|....... ...+.+|+.++..++| .++++++++....+..+++|||++|++
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~ 79 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET 79 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence 4667999999999999754 7899999865432 4578999999999976 589999999888888999999999877
Q ss_pred HHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcccccccccceeeCCCCCeEEccCCCcccCC
Q 011184 140 LAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK---GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 207 (491)
Q Consensus 140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 207 (491)
+..+ +......++.+++.+|.++|.. + ++|+|++|+||+++..+.++++|||.+....
T Consensus 80 ~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~-i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~ 140 (155)
T cd05120 80 LDEV---------SEEEKEDIAEQLAELLAKLHQLPLLV-LCHGDLHPGNILVDDGKILGIIDWEYAGYGP 140 (155)
T ss_pred cccC---------CHHHHHHHHHHHHHHHHHHhCCCceE-EEecCCCcceEEEECCcEEEEEecccccCCC
Confidence 7543 5566778899999999999984 5 9999999999999998999999999876543
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.8e-16 Score=145.97 Aligned_cols=132 Identities=19% Similarity=0.192 Sum_probs=102.3
Q ss_pred CC-CCCccEEEEEEECCCCEEEEEEeCCCCC-------------CChhHHHHHHHHHhccCCCCc--ceEEeEeecCC--
Q 011184 65 HG-EKAPNVVYKGKLENQRRIAVKRFNRMAW-------------PDPRQFLEEARSVGQLRNNRL--TNLLGCCCEGD-- 126 (491)
Q Consensus 65 lG-~G~~g~Vy~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~H~ni--v~~~~~~~~~~-- 126 (491)
+| .|+.|+||..... +..++||.+..... .....+.+|++++..|.|++| +..+++.....
T Consensus 39 lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~ 117 (239)
T PRK01723 39 VGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGL 117 (239)
T ss_pred eecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCc
Confidence 35 6777889988874 67899998854211 123467889999999998875 67777654322
Q ss_pred --eeEEEEecCCC-CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCc
Q 011184 127 --ERLLVAEYMPN-ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLM 203 (491)
Q Consensus 127 --~~~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 203 (491)
..++|||+++| .+|.+++. ..+++... +.+|+.+|.+||+.| |+||||||.|||++.++.++|+|||.+
T Consensus 118 ~~~~~lV~e~l~G~~~L~~~l~---~~~l~~~~----~~~i~~~l~~lH~~G-I~HrDlkp~NILv~~~~~v~LIDfg~~ 189 (239)
T PRK01723 118 FYRADILIERIEGARDLVALLQ---EAPLSEEQ----WQAIGQLIARFHDAG-VYHADLNAHNILLDPDGKFWLIDFDRG 189 (239)
T ss_pred ceeeeEEEEecCCCCCHHHHHh---cCCCCHHH----HHHHHHHHHHHHHCC-CCCCCCCchhEEEcCCCCEEEEECCCc
Confidence 23599999997 69998884 23455443 568999999999999 999999999999999899999999987
Q ss_pred cc
Q 011184 204 KN 205 (491)
Q Consensus 204 ~~ 205 (491)
..
T Consensus 190 ~~ 191 (239)
T PRK01723 190 EL 191 (239)
T ss_pred cc
Confidence 65
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.1e-16 Score=142.65 Aligned_cols=137 Identities=15% Similarity=0.161 Sum_probs=98.2
Q ss_pred cccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCC--hhH----------------------HHHHHHHHhccCCC--Cc
Q 011184 62 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--PRQ----------------------FLEEARSVGQLRNN--RL 115 (491)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~----------------------~~~E~~~l~~l~H~--ni 115 (491)
.+.||+|+||.||++...+++.||||++....... ... ...|...+..+.+. .+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 35679999999999997789999999986533211 111 13566666666443 34
Q ss_pred ceEEeEeecCCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccccceeeCCCCC
Q 011184 116 TNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGN 194 (491)
Q Consensus 116 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~~ 194 (491)
.+.+++ ...++||||++|+++...... ..... .....++.+++.++.++|. .+ ++|+||||+||+++ ++.
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~--~~~~~-~~~~~~~~~~~~~l~~lh~~~~-ivH~Dl~p~Nili~-~~~ 152 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLK--DVRLL-EDPEELYDQILELMRKLYREAG-LVHGDLSEYNILVD-DGK 152 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhh--hhhhc-ccHHHHHHHHHHHHHHHhhccC-cCcCCCChhhEEEE-CCc
Confidence 555543 235899999998543221110 00011 5678899999999999999 88 99999999999999 899
Q ss_pred eEEccCCCcccCC
Q 011184 195 PRLSTFGLMKNSR 207 (491)
Q Consensus 195 ~kl~Dfgla~~~~ 207 (491)
++|+|||.+....
T Consensus 153 ~~liDfg~a~~~~ 165 (187)
T cd05119 153 VYIIDVPQAVEID 165 (187)
T ss_pred EEEEECccccccc
Confidence 9999999986543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.1e-16 Score=133.72 Aligned_cols=105 Identities=15% Similarity=0.111 Sum_probs=100.9
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHH
Q 011184 384 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 463 (491)
Q Consensus 384 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 463 (491)
.++..|..+++.|+|++|+..|++++.++|. +..+|.++|.++..+|++++|+..|++|++++|+++.+|+++|.++..
T Consensus 26 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~~~~a~~~lg~~l~~ 104 (144)
T PRK15359 26 TVYASGYASWQEGDYSRAVIDFSWLVMAQPW-SWRAHIALAGTWMMLKEYTTAINFYGHALMLDASHPEPVYQTGVCLKM 104 (144)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHH
Confidence 4778899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHccccccccccc
Q 011184 464 MGMENEAQVALKEGTTLEAKKNSTAG 489 (491)
Q Consensus 464 ~~~~~~A~~~~~~al~l~~~~~~~~~ 489 (491)
+|++++|+++|++|++++|++...+.
T Consensus 105 ~g~~~eAi~~~~~Al~~~p~~~~~~~ 130 (144)
T PRK15359 105 MGEPGLAREAFQTAIKMSYADASWSE 130 (144)
T ss_pred cCCHHHHHHHHHHHHHhCCCChHHHH
Confidence 99999999999999999999987653
|
|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.4e-16 Score=150.50 Aligned_cols=106 Identities=27% Similarity=0.407 Sum_probs=102.3
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 460 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (491)
.+.....+|+.+|+.|+|..|++.|++||..+|+ ++.+|.|||+||.++|.+..|+.|++++|+++|++.++|++.|.+
T Consensus 357 ~A~e~r~kGne~Fk~gdy~~Av~~YteAIkr~P~-Da~lYsNRAac~~kL~~~~~aL~Da~~~ieL~p~~~kgy~RKg~a 435 (539)
T KOG0548|consen 357 KAEEEREKGNEAFKKGDYPEAVKHYTEAIKRDPE-DARLYSNRAACYLKLGEYPEALKDAKKCIELDPNFIKAYLRKGAA 435 (539)
T ss_pred HHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCc-hhHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCchHHHHHHHHHHH
Confidence 3677788899999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHHHccccccccc
Q 011184 461 LSAMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
+..+.+|++|.++|++|+++||++.++
T Consensus 436 l~~mk~ydkAleay~eale~dp~~~e~ 462 (539)
T KOG0548|consen 436 LRAMKEYDKALEAYQEALELDPSNAEA 462 (539)
T ss_pred HHHHHHHHHHHHHHHHHHhcCchhHHH
Confidence 999999999999999999999998875
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.8e-17 Score=170.65 Aligned_cols=249 Identities=16% Similarity=0.166 Sum_probs=187.7
Q ss_pred CccccccccCCCCCccEEEEEEEC--CCCEEEEEEeCCCC--CCChhHHHHHHHHHhccC-CCCcceEEeEeecCCeeEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLE--NQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~~l 130 (491)
...++++..+|+|+++.|-..... ....+|+|.+.... .........|..+-..+. |+|++++++.....+..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 345667777899999999887742 34566777665443 122334455777777776 9999999999999999999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH-hCCCcccccccccceeeCCCC-CeEEccCCCcccCCC
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT-SKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRD 208 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH-~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~ 208 (491)
+++|..|+++.+.+........+....-.++.|+..++.|+| ..+ +.|+|+||+|.+++..+ .+++.|||+|.....
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~-~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG-VTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccc-cccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 999999999998873222224566677788999999999999 888 99999999999999999 999999999886654
Q ss_pred --C-----Ccccc-CCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccccccccc--ccCCC
Q 011184 209 --G-----KSYST-NLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC--LEGQF 277 (491)
Q Consensus 209 --~-----~~~~~-t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 277 (491)
+ ....| ++.|+|||...+. ...+..|+||.|+++.-+++|..|........ .....+.... .....
T Consensus 178 ~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~ 254 (601)
T KOG0590|consen 178 KNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD---GRYSSWKSNKGRFTQLP 254 (601)
T ss_pred cCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc---ccceeecccccccccCc
Confidence 2 12357 8999999999874 46778999999999999999997754322211 1111111111 11223
Q ss_pred CchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 278 TDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 278 ~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
....+....+++.+++..+|..|.+.+++..
T Consensus 255 ~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 255 WNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred cccCChhhhhcccccccCCchhccccccccc
Confidence 4456678899999999999999999988865
|
|
| >KOG4234 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.62 E-value=3e-15 Score=126.15 Aligned_cols=111 Identities=18% Similarity=0.242 Sum_probs=103.7
Q ss_pred hhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC----cHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchH
Q 011184 377 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV----SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI 452 (491)
Q Consensus 377 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~ 452 (491)
.....+..+...|+.+|..|+|++|...|..||++.|.- ...+|.|+|.|+++++..+.||++|.+||+|+|.+-+
T Consensus 90 k~~~kad~lK~EGN~~F~ngdyeeA~skY~~Ale~cp~~~~e~rsIly~Nraaa~iKl~k~e~aI~dcsKaiel~pty~k 169 (271)
T KOG4234|consen 90 KAIEKADSLKKEGNELFKNGDYEEANSKYQEALESCPSTSTEERSILYSNRAAALIKLRKWESAIEDCSKAIELNPTYEK 169 (271)
T ss_pred HHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHhCccccHHHHHHHHhhhHHHHHHhhhHHHHHHHHHhhHhcCchhHH
Confidence 345678899999999999999999999999999999972 3467999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCChHHHHHHHHHHHccccccccc
Q 011184 453 ASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 453 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
|..+++.+|-++.+|++|+++|++.+++||....+
T Consensus 170 Al~RRAeayek~ek~eealeDyKki~E~dPs~~ea 204 (271)
T KOG4234|consen 170 ALERRAEAYEKMEKYEEALEDYKKILESDPSRREA 204 (271)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHhCcchHHH
Confidence 99999999999999999999999999999998765
|
|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.9e-15 Score=145.44 Aligned_cols=105 Identities=28% Similarity=0.394 Sum_probs=101.0
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHH
Q 011184 382 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 461 (491)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (491)
+..+..+|++.+..|||+.|+..|+.||.++|. +..+|.|+..+|..+|+|++|+.|..+.++++|+++++|.++|.++
T Consensus 2 a~e~k~kgnaa~s~~d~~~ai~~~t~ai~l~p~-nhvlySnrsaa~a~~~~~~~al~da~k~~~l~p~w~kgy~r~Gaa~ 80 (539)
T KOG0548|consen 2 AVELKEKGNAAFSSGDFETAIRLFTEAIMLSPT-NHVLYSNRSAAYASLGSYEKALKDATKTRRLNPDWAKGYSRKGAAL 80 (539)
T ss_pred hhHHHHHHHhhcccccHHHHHHHHHHHHccCCC-ccchhcchHHHHHHHhhHHHHHHHHHHHHhcCCchhhHHHHhHHHH
Confidence 356789999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHCCChHHHHHHHHHHHccccccccc
Q 011184 462 SAMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 462 ~~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
+.+|+|++|+..|.++|+.||+|.-.
T Consensus 81 ~~lg~~~eA~~ay~~GL~~d~~n~~L 106 (539)
T KOG0548|consen 81 FGLGDYEEAILAYSEGLEKDPSNKQL 106 (539)
T ss_pred HhcccHHHHHHHHHHHhhcCCchHHH
Confidence 99999999999999999999998643
|
|
| >PRK15363 pathogenicity island 2 chaperone protein SscA; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.1e-14 Score=120.68 Aligned_cols=101 Identities=16% Similarity=-0.012 Sum_probs=98.3
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHH
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 459 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (491)
++.+.++..|..+++.|++++|...|+-+..++|. +...|+++|.|+..+|+|++||..|.+|+.++|+++.++++.|.
T Consensus 33 ~~l~~lY~~A~~ly~~G~l~~A~~~f~~L~~~Dp~-~~~y~~gLG~~~Q~~g~~~~AI~aY~~A~~L~~ddp~~~~~ag~ 111 (157)
T PRK15363 33 QPLNTLYRYAMQLMEVKEFAGAARLFQLLTIYDAW-SFDYWFRLGECCQAQKHWGEAIYAYGRAAQIKIDAPQAPWAAAE 111 (157)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHH
Confidence 56778999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHHHccc
Q 011184 460 ALSAMGMENEAQVALKEGTTLE 481 (491)
Q Consensus 460 ~~~~~~~~~~A~~~~~~al~l~ 481 (491)
|++.+|+.++|+++|+.|+...
T Consensus 112 c~L~lG~~~~A~~aF~~Ai~~~ 133 (157)
T PRK15363 112 CYLACDNVCYAIKALKAVVRIC 133 (157)
T ss_pred HHHHcCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999887
|
|
| >PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1e-14 Score=142.42 Aligned_cols=104 Identities=24% Similarity=0.269 Sum_probs=100.1
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHH
Q 011184 383 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 462 (491)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 462 (491)
..+..+|..++..|+|++|++.|++||+++|+ ++.+|.++|.+|..+|++++|+.++++|++++|+++.+|+++|.+|+
T Consensus 3 ~~l~~~a~~a~~~~~~~~Ai~~~~~Al~~~P~-~~~a~~~~a~~~~~~g~~~eAl~~~~~Al~l~P~~~~a~~~lg~~~~ 81 (356)
T PLN03088 3 KDLEDKAKEAFVDDDFALAVDLYTQAIDLDPN-NAELYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYLRKGTACM 81 (356)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 35788899999999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred HCCChHHHHHHHHHHHccccccccc
Q 011184 463 AMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 463 ~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
.+|+|++|+.+|++|++++|++..+
T Consensus 82 ~lg~~~eA~~~~~~al~l~P~~~~~ 106 (356)
T PLN03088 82 KLEEYQTAKAALEKGASLAPGDSRF 106 (356)
T ss_pred HhCCHHHHHHHHHHHHHhCCCCHHH
Confidence 9999999999999999999998765
|
|
| >KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.3e-14 Score=136.17 Aligned_cols=112 Identities=19% Similarity=0.267 Sum_probs=101.7
Q ss_pred hhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC--------------CcHHHHhhHHHHHHhcCChHHHHHHHHH
Q 011184 377 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTM--------------VSPTVYARRSLCYLMSDMPQDALNDAMQ 442 (491)
Q Consensus 377 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~--------------~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 442 (491)
+.+..+......|+.+|+.|+|..|...|++|+..=+. .-..++.|+|+||+++++|.+|+..|++
T Consensus 203 e~l~~A~~~ke~Gn~~fK~gk~~~A~~~Yerav~~l~~~~~~~~ee~~~~~~~k~~~~lNlA~c~lKl~~~~~Ai~~c~k 282 (397)
T KOG0543|consen 203 ERLEAADRKKERGNVLFKEGKFKLAKKRYERAVSFLEYRRSFDEEEQKKAEALKLACHLNLAACYLKLKEYKEAIESCNK 282 (397)
T ss_pred HHHHHHHHHHHhhhHHHhhchHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHHHhhHHHHHHHhhhhHHHHHHHHHH
Confidence 47788889999999999999999999999999854331 0235699999999999999999999999
Q ss_pred HHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 443 AQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 443 al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
+|+++|+|.+|+|++|.|+..+|+|+.|+.+|++|++++|.|..+.
T Consensus 283 vLe~~~~N~KALyRrG~A~l~~~e~~~A~~df~ka~k~~P~Nka~~ 328 (397)
T KOG0543|consen 283 VLELDPNNVKALYRRGQALLALGEYDLARDDFQKALKLEPSNKAAR 328 (397)
T ss_pred HHhcCCCchhHHHHHHHHHHhhccHHHHHHHHHHHHHhCCCcHHHH
Confidence 9999999999999999999999999999999999999999997654
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.57 E-value=8.6e-15 Score=146.46 Aligned_cols=139 Identities=19% Similarity=0.196 Sum_probs=98.6
Q ss_pred ccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCC--------------------------h--------------hHHHH
Q 011184 63 SEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--------------------------P--------------RQFLE 102 (491)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------------------------~--------------~~~~~ 102 (491)
..+|.|++|.||+|++.+|+.||||+.+.+.... . -+|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 3579999999999999899999999986542110 0 02556
Q ss_pred HHHHHhccC----CCCcceEEeEee-cCCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHH-HHHHHHhCCC
Q 011184 103 EARSVGQLR----NNRLTNLLGCCC-EGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQ-ALEYCTSKGR 176 (491)
Q Consensus 103 E~~~l~~l~----H~niv~~~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~-~L~~LH~~~~ 176 (491)
|+..+.++. |.+-+.+-.++. .....+|||||++|++|.+..... ..... ...++..++. .+..+|..|
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~-~~~~~---~~~ia~~~~~~~l~ql~~~g- 277 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALD-EAGLD---RKALAENLARSFLNQVLRDG- 277 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHH-hcCCC---HHHHHHHHHHHHHHHHHhCC-
Confidence 676666662 333233333332 234569999999999998876421 11222 3455666655 477889998
Q ss_pred cccccccccceeeCCCCCeEEccCCCcccC
Q 011184 177 ALYHDLNAYRILFDEDGNPRLSTFGLMKNS 206 (491)
Q Consensus 177 iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 206 (491)
++|+|+||.||+++.+++++++|||++...
T Consensus 278 ~~H~D~hPgNilv~~~g~i~liDfG~~~~l 307 (437)
T TIGR01982 278 FFHADLHPGNIFVLKDGKIIALDFGIVGRL 307 (437)
T ss_pred ceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence 999999999999999999999999997654
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG4648 consensus Uncharacterized conserved protein, contains LRR repeats [Function unknown] | Back alignment and domain information |
|---|
Probab=99.55 E-value=7.6e-15 Score=133.47 Aligned_cols=109 Identities=23% Similarity=0.310 Sum_probs=103.5
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 457 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (491)
....+..+..+|+.||++|.|++||.+|.++|..+|. ++.++.|||.+|+++++|..|..||+.|+.|+..+.+||-++
T Consensus 93 LL~~~SEiKE~GN~yFKQgKy~EAIDCYs~~ia~~P~-NpV~~~NRA~AYlk~K~FA~AE~DC~~AiaLd~~Y~KAYSRR 171 (536)
T KOG4648|consen 93 LLKKASEIKERGNTYFKQGKYEEAIDCYSTAIAVYPH-NPVYHINRALAYLKQKSFAQAEEDCEAAIALDKLYVKAYSRR 171 (536)
T ss_pred HHHhhHHHHHhhhhhhhccchhHHHHHhhhhhccCCC-CccchhhHHHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHH
Confidence 3455666899999999999999999999999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHHHccccccccc
Q 011184 458 AAALSAMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 458 g~~~~~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
|.+...+|+.+||.++++.+|+|+|++.+.
T Consensus 172 ~~AR~~Lg~~~EAKkD~E~vL~LEP~~~EL 201 (536)
T KOG4648|consen 172 MQARESLGNNMEAKKDCETVLALEPKNIEL 201 (536)
T ss_pred HHHHHHHhhHHHHHHhHHHHHhhCcccHHH
Confidence 999999999999999999999999998764
|
|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.6e-14 Score=135.70 Aligned_cols=100 Identities=26% Similarity=0.353 Sum_probs=95.0
Q ss_pred hhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHH
Q 011184 377 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 456 (491)
Q Consensus 377 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 456 (491)
+...-+.++..+|+-+|+.|+|++||++|++||+++|+ .+..|.||+.||..+|++++.++++.+||+++|++++|+++
T Consensus 110 ~~~k~A~~lK~~GN~~f~~kkY~eAIkyY~~AI~l~p~-epiFYsNraAcY~~lgd~~~Vied~TkALEl~P~Y~KAl~R 188 (606)
T KOG0547|consen 110 ERLKYAAALKTKGNKFFRNKKYDEAIKYYTQAIELCPD-EPIFYSNRAACYESLGDWEKVIEDCTKALELNPDYVKALLR 188 (606)
T ss_pred HHHHHHHHHHhhhhhhhhcccHHHHHHHHHHHHhcCCC-CchhhhhHHHHHHHHhhHHHHHHHHHHHhhcCcHHHHHHHH
Confidence 34567889999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCChHHHHHHHHHH
Q 011184 457 QAAALSAMGMENEAQVALKEG 477 (491)
Q Consensus 457 ~g~~~~~~~~~~~A~~~~~~a 477 (491)
++.++..+|++++|+.+..-.
T Consensus 189 RA~A~E~lg~~~eal~D~tv~ 209 (606)
T KOG0547|consen 189 RASAHEQLGKFDEALFDVTVL 209 (606)
T ss_pred HHHHHHhhccHHHHHHhhhHH
Confidence 999999999999999987653
|
|
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1e-13 Score=132.43 Aligned_cols=105 Identities=12% Similarity=-0.035 Sum_probs=101.6
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHH
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 459 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (491)
..+..++.+|..+...|++++|+..|++|++++|+ ++.+|+++|.++...|++++|++.|++|++++|++..+|+++|.
T Consensus 62 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~ 140 (296)
T PRK11189 62 ERAQLHYERGVLYDSLGLRALARNDFSQALALRPD-MADAYNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAYLNRGI 140 (296)
T ss_pred hhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45678999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHHHccccccc
Q 011184 460 ALSAMGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 460 ~~~~~~~~~~A~~~~~~al~l~~~~~ 485 (491)
+++..|++++|++.|+++++++|++.
T Consensus 141 ~l~~~g~~~eA~~~~~~al~~~P~~~ 166 (296)
T PRK11189 141 ALYYGGRYELAQDDLLAFYQDDPNDP 166 (296)
T ss_pred HHHHCCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999885
|
|
| >KOG1125 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.53 E-value=6.5e-14 Score=136.04 Aligned_cols=107 Identities=13% Similarity=0.168 Sum_probs=101.9
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHH
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 459 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (491)
.+++....+|..|+-.|+|++|+.+|+.||..+|+ +..+|+++|.++....+..+||..|.+|++|.|.++.++||+|+
T Consensus 428 ~DpdvQ~~LGVLy~ls~efdraiDcf~~AL~v~Pn-d~~lWNRLGAtLAN~~~s~EAIsAY~rALqLqP~yVR~RyNlgI 506 (579)
T KOG1125|consen 428 IDPDVQSGLGVLYNLSGEFDRAVDCFEAALQVKPN-DYLLWNRLGATLANGNRSEEAISAYNRALQLQPGYVRVRYNLGI 506 (579)
T ss_pred CChhHHhhhHHHHhcchHHHHHHHHHHHHHhcCCc-hHHHHHHhhHHhcCCcccHHHHHHHHHHHhcCCCeeeeehhhhh
Confidence 56778888999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHHHccccccccc
Q 011184 460 ALSAMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 460 ~~~~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
+++.+|.|+||+++|-.||.+.++..+.
T Consensus 507 S~mNlG~ykEA~~hlL~AL~mq~ks~~~ 534 (579)
T KOG1125|consen 507 SCMNLGAYKEAVKHLLEALSMQRKSRNH 534 (579)
T ss_pred hhhhhhhHHHHHHHHHHHHHhhhccccc
Confidence 9999999999999999999999985543
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.4e-14 Score=142.65 Aligned_cols=240 Identities=21% Similarity=0.252 Sum_probs=182.4
Q ss_pred cccccCCC--CCccEEEEEEE---CCCCEEEEEEeCC--CCCCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEE
Q 011184 60 NIVSEHGE--KAPNVVYKGKL---ENQRRIAVKRFNR--MAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 60 ~~i~~lG~--G~~g~Vy~~~~---~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv 131 (491)
.+...+|. |.+|.||.+.. .++..+|+|+-+. ........-.+|+...+.+ .|+|.++.+..+...+..++-
T Consensus 117 ~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiq 196 (524)
T KOG0601|consen 117 PISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQ 196 (524)
T ss_pred ccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceee
Confidence 34567788 99999999986 3478899998433 2223334456778888888 599999999999999999999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHH----HHHHHHhCCCcccccccccceeeCCC-CCeEEccCCCcccC
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQ----ALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNS 206 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~----~L~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~ 206 (491)
+|++. .+|..+.... ..-++....+.++.+... ||.++|+.+ ++|-|+||.||++..+ ...+++|||+....
T Consensus 197 tE~~~-~sl~~~~~~~-~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~-~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i 273 (524)
T KOG0601|consen 197 TELCG-ESLQSYCHTP-CNFLPDNLLWNSLRDWLSRDVTALSHLHSNN-IVHDDLKPANIFTTSDWTSCKLTDFGLVSKI 273 (524)
T ss_pred ecccc-chhHHhhhcc-cccCCchhhhhHHhhhhhcccccccccCCCc-ccccccchhheecccccceeecCCcceeEEc
Confidence 99985 8888887642 234677788888888888 999999998 9999999999999988 88999999988765
Q ss_pred CCCC---------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCC
Q 011184 207 RDGK---------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 277 (491)
Q Consensus 207 ~~~~---------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (491)
.... ...+...|++||... +.++..+|+|++|.+..+..++..++...-...|. .+.....+.++
T Consensus 274 ~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~-----~~r~~~ip~e~ 347 (524)
T KOG0601|consen 274 SDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSSWS-----QLRQGYIPLEF 347 (524)
T ss_pred cCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCCcc-----ccccccCchhh
Confidence 5432 113567799999987 67889999999999999999988765433111111 11111123344
Q ss_pred CchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 278 TDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 278 ~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
....+..+...+..+++.+|-.|++.+.+..
T Consensus 348 ~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 348 CEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred hcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 4455567777999999999999998887765
|
|
| >TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.2e-13 Score=116.00 Aligned_cols=111 Identities=13% Similarity=0.102 Sum_probs=105.1
Q ss_pred hhhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHH
Q 011184 376 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 455 (491)
Q Consensus 376 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 455 (491)
...+.++...+.+|..+++.|++++|++.|++++..+|. +..++.++|.++..+|++++|+..++++++++|+++..++
T Consensus 11 ~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~ 89 (135)
T TIGR02552 11 GLDSEQLEQIYALAYNLYQQGRYDEALKLFQLLAAYDPY-NSRYWLGLAACCQMLKEYEEAIDAYALAAALDPDDPRPYF 89 (135)
T ss_pred cCChhhHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHH
Confidence 345567788999999999999999999999999999999 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCChHHHHHHHHHHHccccccccc
Q 011184 456 LQAAALSAMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 456 ~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
++|.++..+|++++|++.|+++++++|++...
T Consensus 90 ~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 121 (135)
T TIGR02552 90 HAAECLLALGEPESALKALDLAIEICGENPEY 121 (135)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhccccchH
Confidence 99999999999999999999999999998774
|
ScyD/LcrH contains three central tetratricopeptide-like repeats that are predicted to fold into an all-alpha-helical array. |
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.4e-14 Score=138.37 Aligned_cols=109 Identities=17% Similarity=0.117 Sum_probs=84.0
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 457 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (491)
.+.-+.+..++|..+-++|++++|+.+|..||+++|. .+.+|.|+|.+|..+|+.++|+.+|.+||.++|.+++|+.|+
T Consensus 384 ~p~~aaa~nNLa~i~kqqgnl~~Ai~~YkealrI~P~-fAda~~NmGnt~ke~g~v~~A~q~y~rAI~~nPt~AeAhsNL 462 (966)
T KOG4626|consen 384 FPEFAAAHNNLASIYKQQGNLDDAIMCYKEALRIKPT-FADALSNMGNTYKEMGDVSAAIQCYTRAIQINPTFAEAHSNL 462 (966)
T ss_pred ChhhhhhhhhHHHHHHhcccHHHHHHHHHHHHhcCch-HHHHHHhcchHHHHhhhHHHHHHHHHHHHhcCcHHHHHHhhH
Confidence 3455667777777777777777777777777777777 777777777777777777777777777777777777777777
Q ss_pred HHHHHHCCChHHHHHHHHHHHccccccccc
Q 011184 458 AAALSAMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 458 g~~~~~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
|.+|...|+..+|+..|+.||+|+|+..+|
T Consensus 463 asi~kDsGni~~AI~sY~~aLklkPDfpdA 492 (966)
T KOG4626|consen 463 ASIYKDSGNIPEAIQSYRTALKLKPDFPDA 492 (966)
T ss_pred HHHhhccCCcHHHHHHHHHHHccCCCCchh
Confidence 777777777777777777777777777665
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.8e-14 Score=131.01 Aligned_cols=196 Identities=18% Similarity=0.236 Sum_probs=138.9
Q ss_pred HHHhccCCCCcceEEeEeecCC-----eeEEEEecCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhCC-C
Q 011184 105 RSVGQLRNNRLTNLLGCCCEGD-----ERLLVAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKG-R 176 (491)
Q Consensus 105 ~~l~~l~H~niv~~~~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~-~ 176 (491)
..|-++-|.|||+++.|+.+.. ...++.||+..|+|..+|++. ....+......+|+.||+.||.|||+.. +
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Pp 198 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCc
Confidence 3445567999999999987643 367899999999999999753 3456788888999999999999999975 4
Q ss_pred cccccccccceeeCCCCCeEEccCCCccc------CC--CCCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhC
Q 011184 177 ALYHDLNAYRILFDEDGNPRLSTFGLMKN------SR--DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG 248 (491)
Q Consensus 177 iiH~Dlkp~Nill~~~~~~kl~Dfgla~~------~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg 248 (491)
|+|+++..+-|++..+|-+|+.----... .. ......+-++|.+||.-.....+.++|||+||...++|..+
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail 278 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL 278 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence 89999999999999999888753211100 00 11122345789999987767788899999999999999988
Q ss_pred CCCC-CCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 249 KHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 249 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
..-+ .....-.........+.. .....-+.++.+|++..|..||++++++-.
T Consensus 279 Eiq~tnseS~~~~ee~ia~~i~~---------len~lqr~~i~kcl~~eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 279 EIQSTNSESKVEVEENIANVIIG---------LENGLQRGSITKCLEGEPNGRPDARLLLFH 331 (458)
T ss_pred eeccCCCcceeehhhhhhhheee---------ccCccccCcCcccccCCCCCCcchhhhhcC
Confidence 7422 111111111111111110 001123468899999999999999998753
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.51 E-value=6.3e-14 Score=136.50 Aligned_cols=117 Identities=12% Similarity=0.045 Sum_probs=110.7
Q ss_pred hhhhhhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchH
Q 011184 373 QMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI 452 (491)
Q Consensus 373 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~ 452 (491)
+...-.+..+.+..++|+++.+.|.+++|...|.+|++..|. .+++++|+|.+|.++|++++|+.+|+.||+++|.+++
T Consensus 345 kaL~l~p~hadam~NLgni~~E~~~~e~A~~ly~~al~v~p~-~aaa~nNLa~i~kqqgnl~~Ai~~YkealrI~P~fAd 423 (966)
T KOG4626|consen 345 KALRLCPNHADAMNNLGNIYREQGKIEEATRLYLKALEVFPE-FAAAHNNLASIYKQQGNLDDAIMCYKEALRIKPTFAD 423 (966)
T ss_pred HHHHhCCccHHHHHHHHHHHHHhccchHHHHHHHHHHhhChh-hhhhhhhHHHHHHhcccHHHHHHHHHHHHhcCchHHH
Confidence 334446678899999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCChHHHHHHHHHHHcccccccccccC
Q 011184 453 ASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQ 490 (491)
Q Consensus 453 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~~ 490 (491)
+|.|+|+.|-.+|+.++|+++|.+|+.++|..++|+++
T Consensus 424 a~~NmGnt~ke~g~v~~A~q~y~rAI~~nPt~AeAhsN 461 (966)
T KOG4626|consen 424 ALSNMGNTYKEMGDVSAAIQCYTRAIQINPTFAEAHSN 461 (966)
T ss_pred HHHhcchHHHHhhhHHHHHHHHHHHHhcCcHHHHHHhh
Confidence 99999999999999999999999999999999998764
|
|
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.1e-13 Score=121.63 Aligned_cols=111 Identities=13% Similarity=0.039 Sum_probs=103.0
Q ss_pred hhhhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHH-HhcCC--hHHHHHHHHHHHhhCCCch
Q 011184 375 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCY-LMSDM--PQDALNDAMQAQIISPIWH 451 (491)
Q Consensus 375 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~-~~~~~--~~~A~~~~~~al~l~p~~~ 451 (491)
....+.++..|..+|..+...|++++|+..|++|++++|+ ++.++.+.|.++ ...|+ +++|++.++++++++|+++
T Consensus 66 L~~~P~~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~-~~~~~~~lA~aL~~~~g~~~~~~A~~~l~~al~~dP~~~ 144 (198)
T PRK10370 66 IRANPQNSEQWALLGEYYLWRNDYDNALLAYRQALQLRGE-NAELYAALATVLYYQAGQHMTPQTREMIDKALALDANEV 144 (198)
T ss_pred HHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHhCCCCh
Confidence 3456678899999999999999999999999999999999 999999999975 67787 5999999999999999999
Q ss_pred HHHHHHHHHHHHCCChHHHHHHHHHHHcccccccc
Q 011184 452 IASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 486 (491)
Q Consensus 452 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 486 (491)
.+++++|.+++.+|+|++|+.+|+++++++|.+.+
T Consensus 145 ~al~~LA~~~~~~g~~~~Ai~~~~~aL~l~~~~~~ 179 (198)
T PRK10370 145 TALMLLASDAFMQADYAQAIELWQKVLDLNSPRVN 179 (198)
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc
Confidence 99999999999999999999999999999987654
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.44 E-value=5.2e-13 Score=116.95 Aligned_cols=129 Identities=16% Similarity=0.104 Sum_probs=96.4
Q ss_pred cccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCc-ceEEeEeecCCeeEEEEecCCCCCH
Q 011184 62 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRL-TNLLGCCCEGDERLLVAEYMPNETL 140 (491)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~~~~~~~~~~~~~lv~e~~~~gsL 140 (491)
+..++.|.++.||++... +..|++|....... ....+.+|+.+++.+.+.++ ++++.+.. ...++||||++|.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCcc
Confidence 345688999999999874 67899999764432 23357889999999965554 45665543 335899999999887
Q ss_pred HHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCC----cccccccccceeeCCCCCeEEccCCCccc
Q 011184 141 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGR----ALYHDLNAYRILFDEDGNPRLSTFGLMKN 205 (491)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~----iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 205 (491)
... .. ....++.+++.+|..||..+. ++|+|++|.||+++ ++.++++|||.+..
T Consensus 79 ~~~-------~~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 79 LTE-------DF---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred ccc-------cc---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 542 01 113456789999999999861 49999999999999 66899999998754
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.5e-13 Score=125.81 Aligned_cols=106 Identities=22% Similarity=0.292 Sum_probs=99.5
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC---cHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV---SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIAS 454 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~ 454 (491)
.+...+.+...|+..|+.|+|..|.++|+.||.++|++ ++.+|.|+|.++.++|+..+|+.+|+.|++|+|...+||
T Consensus 245 ~~k~le~~k~~gN~~fk~G~y~~A~E~Yteal~idP~n~~~naklY~nra~v~~rLgrl~eaisdc~~Al~iD~syikal 324 (486)
T KOG0550|consen 245 MPKKLEVKKERGNDAFKNGNYRKAYECYTEALNIDPSNKKTNAKLYGNRALVNIRLGRLREAISDCNEALKIDSSYIKAL 324 (486)
T ss_pred hHHHHHHHHhhhhhHhhccchhHHHHHHHHhhcCCccccchhHHHHHHhHhhhcccCCchhhhhhhhhhhhcCHHHHHHH
Confidence 34667789999999999999999999999999999983 467799999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCChHHHHHHHHHHHccccc
Q 011184 455 YLQAAALSAMGMENEAQVALKEGTTLEAK 483 (491)
Q Consensus 455 ~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 483 (491)
.++|.|++.+++|++|+++|++|.+++.+
T Consensus 325 l~ra~c~l~le~~e~AV~d~~~a~q~~~s 353 (486)
T KOG0550|consen 325 LRRANCHLALEKWEEAVEDYEKAMQLEKD 353 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 99999999999999999999999998765
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.3e-13 Score=136.59 Aligned_cols=143 Identities=17% Similarity=0.166 Sum_probs=94.6
Q ss_pred CccccccccCCCCCccEEEEEEECC-CCEEEEEEeCCCCCC--------------------------Ch-----------
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLEN-QRRIAVKRFNRMAWP--------------------------DP----------- 97 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~--------------------------~~----------- 97 (491)
|..++. ..+|+|++|.||+|++.+ |+.||||+.+++... +.
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 444444 577999999999999876 999999999754210 00
Q ss_pred ---hHHHHHHHHHhccC----CCCcceEEeEeec-CCeeEEEEecCCCCCHHHHhcccCCC----CCCHHHHHHHHHHHH
Q 011184 98 ---RQFLEEARSVGQLR----NNRLTNLLGCCCE-GDERLLVAEYMPNETLAKHLFHWETH----PMKWAMRLRVVLHLA 165 (491)
Q Consensus 98 ---~~~~~E~~~l~~l~----H~niv~~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~----~l~~~~~~~i~~qi~ 165 (491)
-++.+|+..+.+++ +.+.+.+-.++.+ ....+|||||++|+++.+.-.-...+ .+....+..++.|+
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi- 276 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV- 276 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-
Confidence 12556666666663 4444444444332 34568999999999998742110111 12222233333333
Q ss_pred HHHHHHHhCCCcccccccccceeeCCCC----CeEEccCCCcccCC
Q 011184 166 QALEYCTSKGRALYHDLNAYRILFDEDG----NPRLSTFGLMKNSR 207 (491)
Q Consensus 166 ~~L~~LH~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfgla~~~~ 207 (491)
+..| ++|+|+||.||+++.+| +++++|||++....
T Consensus 277 ------f~~G-ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 277 ------FRDG-FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred ------HhCC-eeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 4577 99999999999999887 99999999976543
|
|
| >KOG0551 consensus Hsp90 co-chaperone CNS1 (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.1e-12 Score=117.40 Aligned_cols=171 Identities=20% Similarity=0.207 Sum_probs=128.3
Q ss_pred HHHHHHHHHHhccCCCCCCCChhHHHHHhccccccC-CCCcccccCCCCCCCCCCCCCCccccCcccchHHHHHHHhhcc
Q 011184 282 GTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET-EVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISY 360 (491)
Q Consensus 282 ~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 360 (491)
...+-.++.....+.-.+--+..++.+.+....--. +.|+ + .+......-++.+.+
T Consensus 14 d~~md~F~e~~~~~~~~k~~~~Dew~kEm~k~PfFMt~~p~----------------~-------gd~~~~~~~LqslK~ 70 (390)
T KOG0551|consen 14 DDVMDGFLEKEQSPPYRKGFHEDEWEKEMNKVPFFMTRAPS----------------E-------GDPNPDNVCLQSLKA 70 (390)
T ss_pred hhhhhhhcccccCccccCCCCHHHHHHHHhcCcHHHhcCCC----------------C-------CCCCccHHHHHHhhh
Confidence 345556666665544223357888888776552210 1111 0 011123445555555
Q ss_pred cCcchhhhhhhhhhhhhhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhc---CCCCcHHHHhhHHHHHHhcCChHHHH
Q 011184 361 KDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA---GTMVSPTVYARRSLCYLMSDMPQDAL 437 (491)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~---~p~~~~~~~~~~~~~~~~~~~~~~A~ 437 (491)
...++. .-..|..+...|+.+|+.++|..|+.+|+++|+. ||+.++.+|.|||.|...+|+|..||
T Consensus 71 da~E~e-----------p~E~Aen~KeeGN~~fK~Kryk~A~~~Yt~Glk~kc~D~dlnavLY~NRAAa~~~l~NyRs~l 139 (390)
T KOG0551|consen 71 DAEEGE-----------PHEQAENYKEEGNEYFKEKRYKDAVESYTEGLKKKCADPDLNAVLYTNRAAAQLYLGNYRSAL 139 (390)
T ss_pred ccccCC-----------hHHHHHHHHHHhHHHHHhhhHHHHHHHHHHHHhhcCCCccHHHHHHhhHHHHHHHHHHHHHHH
Confidence 522222 2247889999999999999999999999999975 55667889999999999999999999
Q ss_pred HHHHHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccc
Q 011184 438 NDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 486 (491)
Q Consensus 438 ~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 486 (491)
.||.+|+.++|.+.+||++-+.|+++++++++|+.+++..++++.+...
T Consensus 140 ~Dcs~al~~~P~h~Ka~~R~Akc~~eLe~~~~a~nw~ee~~~~d~e~K~ 188 (390)
T KOG0551|consen 140 NDCSAALKLKPTHLKAYIRGAKCLLELERFAEAVNWCEEGLQIDDEAKK 188 (390)
T ss_pred HHHHHHHhcCcchhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhhHHHHH
Confidence 9999999999999999999999999999999999999999988766543
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.6e-12 Score=112.11 Aligned_cols=136 Identities=11% Similarity=0.147 Sum_probs=99.6
Q ss_pred ccCCCCCccEEEEEEECC-------CCEEEEEEeCCCCC---------------------CC-hhHH----HHHHHHHhc
Q 011184 63 SEHGEKAPNVVYKGKLEN-------QRRIAVKRFNRMAW---------------------PD-PRQF----LEEARSVGQ 109 (491)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~---------------------~~-~~~~----~~E~~~l~~ 109 (491)
+.+|.|--+.||.|...+ +..+|||+.+.... .+ ...+ .+|+..|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 567999999999998543 47999998853210 01 1122 379999999
Q ss_pred cCC--CCcceEEeEeecCCeeEEEEecCCCCCHHH-HhcccCCCCCCHHHHHHHHHHHHHHHHHH-HhCCCccccccccc
Q 011184 110 LRN--NRLTNLLGCCCEGDERLLVAEYMPNETLAK-HLFHWETHPMKWAMRLRVVLHLAQALEYC-TSKGRALYHDLNAY 185 (491)
Q Consensus 110 l~H--~niv~~~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~l~~~~~~~i~~qi~~~L~~L-H~~~~iiH~Dlkp~ 185 (491)
+.. -+++.++++ ...+|||||+.+..+.. .+. ...++......+..+++.+|..| |..+ +||+||++.
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk---d~~~~~~~~~~i~~~i~~~l~~l~H~~g-lVHGDLs~~ 154 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK---DAKLNDEEMKNAYYQVLSMMKQLYKECN-LVHADLSEY 154 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh---ccccCHHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHH
Confidence 953 567777765 34589999997643322 221 22345556677889999999999 8888 999999999
Q ss_pred ceeeCCCCCeEEccCCCcccCC
Q 011184 186 RILFDEDGNPRLSTFGLMKNSR 207 (491)
Q Consensus 186 Nill~~~~~~kl~Dfgla~~~~ 207 (491)
|||++ ++.+.|+|||.+....
T Consensus 155 NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 155 NMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred HEEEE-CCcEEEEECCCceeCC
Confidence 99997 4679999999887654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.3e-12 Score=127.37 Aligned_cols=163 Identities=15% Similarity=0.173 Sum_probs=126.9
Q ss_pred ECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCCHHHHhcccCCCCCCHHHH
Q 011184 78 LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 157 (491)
Q Consensus 78 ~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~ 157 (491)
..++.+|.|...+...........+-++-|+.++||||++++..+...+..|||+|-+ ..|..++.. +....+
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~-----l~~~~v 106 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKE-----LGKEEV 106 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHH-----hHHHHH
Confidence 5568899999987655433455677889999999999999999999999999999998 467777743 335566
Q ss_pred HHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCCc----cccCCCCCCcccccCCCCCCCc
Q 011184 158 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS----YSTNLAFTPPEYLRTGRVTPES 233 (491)
Q Consensus 158 ~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~----~~~t~~y~aPE~~~~~~~~~~~ 233 (491)
.--+.||+.||.|||..+.++|++|.-+-|+|+..|..||++|-++........ ...-..|..|+.+.... -..
T Consensus 107 ~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~--~s~ 184 (690)
T KOG1243|consen 107 CLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSE--WSI 184 (690)
T ss_pred HHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccc--cch
Confidence 667899999999999766699999999999999999999999988755433221 11123466666554222 346
Q ss_pred cchhHHHHHHHHHhCC
Q 011184 234 VIYSFGTLLLDLLSGK 249 (491)
Q Consensus 234 Dv~slG~vl~elltg~ 249 (491)
|.|.||+++++++.|.
T Consensus 185 D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 185 DSWGLGCLIEELFNGS 200 (690)
T ss_pred hhhhHHHHHHHHhCcc
Confidence 9999999999999994
|
|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.39 E-value=1e-12 Score=96.21 Aligned_cols=67 Identities=16% Similarity=0.133 Sum_probs=53.0
Q ss_pred cHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHCC-ChHHHHHHHHHHHcccc
Q 011184 416 SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMG-MENEAQVALKEGTTLEA 482 (491)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~-~~~~A~~~~~~al~l~~ 482 (491)
++..|.++|.++...|++++|+.+|++|++++|+++.+|+++|.++..+| ++++|+++|++|++++|
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPNNAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 46677777888888888888888888888888888888888888888887 68888888888887776
|
... |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.6e-13 Score=132.13 Aligned_cols=242 Identities=16% Similarity=0.079 Sum_probs=177.3
Q ss_pred ccccccCCCCCccEEEEEEE--CCCCEEEEEEeCCCCCCChh--HHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEEe
Q 011184 59 ENIVSEHGEKAPNVVYKGKL--ENQRRIAVKRFNRMAWPDPR--QFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e 133 (491)
...+..+|.|.|+.|+.... .++..+++|.+......... .-..|+-+...+ .|.+++.+...|...+..++--|
T Consensus 267 f~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e 346 (524)
T KOG0601|consen 267 FGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLE 346 (524)
T ss_pred cceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchh
Confidence 44567779999999999874 46888999998765433322 234577777766 69999999999988888889999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCC-CCeEEccCCCcccCCCC--C
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSRDG--K 210 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~~~--~ 210 (491)
||.++++...+. ....+.+..++++..|++.++.++|++. ++|+|+||+||++..+ +..++.|||.+....-. .
T Consensus 347 ~~~~~s~~l~~~--~~~~~d~~~~~~~~~q~~~~l~~i~s~~-~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~~ 423 (524)
T KOG0601|consen 347 FCEGGSSSLRSV--TSQMLDEDPRLRLTAQILTALNVIHSKL-FVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSGV 423 (524)
T ss_pred hhcCcchhhhhH--HHHhcCcchhhhhHHHHHhccccccchh-hhcccccccceeeccchhhhhccccccccccceeccc
Confidence 999998877663 3456788889999999999999999998 9999999999999875 78899999988643221 2
Q ss_pred ccccCCCC-CCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCc-hhhHhhhccccccccccccCCCCchhHHHHHHH
Q 011184 211 SYSTNLAF-TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 288 (491)
Q Consensus 211 ~~~~t~~y-~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (491)
...++..| .++.......+..+.|++|||..+.+.+++....+.. .+..+..+... . .......+..+
T Consensus 424 ~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~~i~~~~~p---------~-~~~~~~~~q~~ 493 (524)
T KOG0601|consen 424 FHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSLTIRSGDTP---------N-LPGLKLQLQVL 493 (524)
T ss_pred ccccccccccchhhccccccccccccccccccccccccCcccCcccccceeeeccccc---------C-CCchHHhhhhh
Confidence 22233344 3555566667888999999999999999998543321 11111111000 1 11223678889
Q ss_pred HHHhccCCCCCCCChhHHHHHhccc
Q 011184 289 ASRCLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~L~~~ 313 (491)
...+...++..||.+.++....+..
T Consensus 494 ~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 494 LKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred hhhhcCCccccchhhhhhcccchhh
Confidence 9999999999999998887654433
|
|
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.37 E-value=5.3e-12 Score=133.48 Aligned_cols=104 Identities=23% Similarity=0.344 Sum_probs=97.0
Q ss_pred HHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHH
Q 011184 379 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 458 (491)
Q Consensus 379 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 458 (491)
...+..++.+|+.+++.|+|++|++.|+++|+++|+ +.+|.++|.||..+|++++|+++|++||+++|++.++|+++|
T Consensus 124 ~~~a~~~k~~G~~~~~~~~~~~Ai~~y~~al~~~p~--~~~~~n~a~~~~~l~~~~~Ai~~~~~al~l~p~~~~a~~~~a 201 (615)
T TIGR00990 124 KKYAAKLKEKGNKAYRNKDFNKAIKLYSKAIECKPD--PVYYSNRAACHNALGDWEKVVEDTTAALELDPDYSKALNRRA 201 (615)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc--hHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 355778999999999999999999999999999997 578999999999999999999999999999999999999999
Q ss_pred HHHHHCCChHHHHHHHHHHHcccccc
Q 011184 459 AALSAMGMENEAQVALKEGTTLEAKK 484 (491)
Q Consensus 459 ~~~~~~~~~~~A~~~~~~al~l~~~~ 484 (491)
.+|..+|+|++|+.+|..++.+++.+
T Consensus 202 ~a~~~lg~~~eA~~~~~~~~~~~~~~ 227 (615)
T TIGR00990 202 NAYDGLGKYADALLDLTASCIIDGFR 227 (615)
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCc
Confidence 99999999999999999888776543
|
|
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.1e-11 Score=107.66 Aligned_cols=109 Identities=12% Similarity=-0.016 Sum_probs=71.4
Q ss_pred hhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhh--CCCchHHH
Q 011184 377 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII--SPIWHIAS 454 (491)
Q Consensus 377 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l--~p~~~~a~ 454 (491)
..+....++.-++..|.+.|+.+.|-+.|++|+.++|+ +..+.+|-|..+..+|+|++|...|++|+.. .|.-+..|
T Consensus 64 ~DPs~~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~-~GdVLNNYG~FLC~qg~~~eA~q~F~~Al~~P~Y~~~s~t~ 142 (250)
T COG3063 64 HDPSYYLAHLVRAHYYQKLGENDLADESYRKALSLAPN-NGDVLNNYGAFLCAQGRPEEAMQQFERALADPAYGEPSDTL 142 (250)
T ss_pred hCcccHHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCC-ccchhhhhhHHHHhCCChHHHHHHHHHHHhCCCCCCcchhh
Confidence 34555666666666666666666666666666666666 6666666666666666666666666666643 34445666
Q ss_pred HHHHHHHHHCCChHHHHHHHHHHHcccccccc
Q 011184 455 YLQAAALSAMGMENEAQVALKEGTTLEAKKNS 486 (491)
Q Consensus 455 ~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 486 (491)
-|+|.|-++.|+.+.|.++|+++|++||++..
T Consensus 143 eN~G~Cal~~gq~~~A~~~l~raL~~dp~~~~ 174 (250)
T COG3063 143 ENLGLCALKAGQFDQAEEYLKRALELDPQFPP 174 (250)
T ss_pred hhhHHHHhhcCCchhHHHHHHHHHHhCcCCCh
Confidence 66666666667777777777777777766554
|
|
| >KOG4642 consensus Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.4e-12 Score=111.83 Aligned_cols=101 Identities=25% Similarity=0.311 Sum_probs=96.1
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHH
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 459 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (491)
..+..+...|+.+|..+.|..|+.+|.+||.++|. .+.+|.|+++||+++++++.+..++.+|++++|+.++++|.+|.
T Consensus 8 ~~a~qlkE~gnk~f~~k~y~~ai~~y~raI~~nP~-~~~Y~tnralchlk~~~~~~v~~dcrralql~~N~vk~h~flg~ 86 (284)
T KOG4642|consen 8 ESAEQLKEQGNKCFIPKRYDDAIDCYSRAICINPT-VASYYTNRALCHLKLKHWEPVEEDCRRALQLDPNLVKAHYFLGQ 86 (284)
T ss_pred hHHHHHHhccccccchhhhchHHHHHHHHHhcCCC-cchhhhhHHHHHHHhhhhhhhhhhHHHHHhcChHHHHHHHHHHH
Confidence 34667888999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHHHccc
Q 011184 460 ALSAMGMENEAQVALKEGTTLE 481 (491)
Q Consensus 460 ~~~~~~~~~~A~~~~~~al~l~ 481 (491)
+++....|++|+..+++|..+-
T Consensus 87 ~~l~s~~~~eaI~~Lqra~sl~ 108 (284)
T KOG4642|consen 87 WLLQSKGYDEAIKVLQRAYSLL 108 (284)
T ss_pred HHHhhccccHHHHHHHHHHHHH
Confidence 9999999999999999997664
|
|
| >KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.34 E-value=4.8e-12 Score=115.48 Aligned_cols=108 Identities=17% Similarity=0.206 Sum_probs=103.0
Q ss_pred hhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHH
Q 011184 377 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 456 (491)
Q Consensus 377 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 456 (491)
..+.+++..+..|..++..|+|.+|+..|..|++.||+ ++.+++.||.+|+.+|+-.-|+.|++++|++.|++..|-..
T Consensus 33 ~~~advekhlElGk~lla~~Q~sDALt~yHaAve~dp~-~Y~aifrRaT~yLAmGksk~al~Dl~rVlelKpDF~~ARiQ 111 (504)
T KOG0624|consen 33 ASPADVEKHLELGKELLARGQLSDALTHYHAAVEGDPN-NYQAIFRRATVYLAMGKSKAALQDLSRVLELKPDFMAARIQ 111 (504)
T ss_pred CCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHcCCch-hHHHHHHHHHHHhhhcCCccchhhHHHHHhcCccHHHHHHH
Confidence 34567888999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCChHHHHHHHHHHHccccccc
Q 011184 457 QAAALSAMGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 457 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 485 (491)
+|.+++++|++++|..+|++.|+-+|.+.
T Consensus 112 Rg~vllK~Gele~A~~DF~~vl~~~~s~~ 140 (504)
T KOG0624|consen 112 RGVVLLKQGELEQAEADFDQVLQHEPSNG 140 (504)
T ss_pred hchhhhhcccHHHHHHHHHHHHhcCCCcc
Confidence 99999999999999999999999999665
|
|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.33 E-value=3e-12 Score=93.69 Aligned_cols=67 Identities=22% Similarity=0.344 Sum_probs=64.8
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcC-ChHHHHHHHHHHHhhCC
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD-MPQDALNDAMQAQIISP 448 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~al~l~p 448 (491)
++..|..+|..+++.|+|++|+..|++||+++|+ ++.+|+++|.+|..+| ++++|++++++|++++|
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPN-NAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 5788999999999999999999999999999999 9999999999999999 79999999999999998
|
... |
| >PLN02789 farnesyltranstransferase | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.4e-11 Score=116.00 Aligned_cols=143 Identities=9% Similarity=-0.010 Sum_probs=117.9
Q ss_pred cchHHHHHHHhhcccCcc-hhhhhhhhhhhhhhHHHHHhHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCCcHHHHhhHH
Q 011184 347 DLTAIHEILEKISYKDDE-GVANELSFQMWTDQMQETLNSKKKGDVAFRQK-DLKDAIECYTQFIDAGTMVSPTVYARRS 424 (491)
Q Consensus 347 ~~~~~~~~l~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~~~~ 424 (491)
+...+...++.+-...+. ..+-...-+.+.-.+.+..+|..+|.++...| ++++|+..++++++.+|+ ++.+|++++
T Consensus 35 ~~~~a~~~~ra~l~~~e~serAL~lt~~aI~lnP~~ytaW~~R~~iL~~L~~~l~eeL~~~~~~i~~npk-nyqaW~~R~ 113 (320)
T PLN02789 35 EFREAMDYFRAVYASDERSPRALDLTADVIRLNPGNYTVWHFRRLCLEALDADLEEELDFAEDVAEDNPK-NYQIWHHRR 113 (320)
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHCCc-chHHhHHHH
Confidence 444455555554222211 22223333445557788899999999999998 689999999999999999 889999999
Q ss_pred HHHHhcCCh--HHHHHHHHHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccccccC
Q 011184 425 LCYLMSDMP--QDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQ 490 (491)
Q Consensus 425 ~~~~~~~~~--~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~~ 490 (491)
.++.++|+. ++++..++++|+++|++..||+.+|.++..+|+|++|+++++++|++||.|..+|.+
T Consensus 114 ~~l~~l~~~~~~~el~~~~kal~~dpkNy~AW~~R~w~l~~l~~~~eeL~~~~~~I~~d~~N~sAW~~ 181 (320)
T PLN02789 114 WLAEKLGPDAANKELEFTRKILSLDAKNYHAWSHRQWVLRTLGGWEDELEYCHQLLEEDVRNNSAWNQ 181 (320)
T ss_pred HHHHHcCchhhHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCchhHHHH
Confidence 999999874 789999999999999999999999999999999999999999999999999999864
|
|
| >TIGR02795 tol_pal_ybgF tol-pal system protein YbgF | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.2e-11 Score=99.55 Aligned_cols=106 Identities=14% Similarity=0.114 Sum_probs=97.0
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC--cHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCc---hHHHHH
Q 011184 382 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---HIASYL 456 (491)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~---~~a~~~ 456 (491)
+..++..|..+++.|+|++|++.|.+++..+|++ ...+++.+|.++.+.|++++|+..|++++..+|++ +.+++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~ 81 (119)
T TIGR02795 2 EEAYYDAALLVLKAGDYADAIQAFQAFLKKYPKSTYAPNAHYWLGEAYYAQGKYADAAKAFLAVVKKYPKSPKAPDALLK 81 (119)
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCccccHHHHHHHHHHHHhhccHHHHHHHHHHHHHHCCCCCcccHHHHH
Confidence 4578999999999999999999999999999872 25678899999999999999999999999999986 678999
Q ss_pred HHHHHHHCCChHHHHHHHHHHHccccccccc
Q 011184 457 QAAALSAMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 457 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
+|.++..+|++++|+..|+++++..|++..+
T Consensus 82 ~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~ 112 (119)
T TIGR02795 82 LGMSLQELGDKEKAKATLQQVIKRYPGSSAA 112 (119)
T ss_pred HHHHHHHhCChHHHHHHHHHHHHHCcCChhH
Confidence 9999999999999999999999999987643
|
Members of this protein family are the product of one of seven genes regularly clustered in operons to encode the proteins of the tol-pal system, which is critical for maintaining the integrity of the bacterial outer membrane. The gene for this periplasmic protein has been designated orf2 and ybgF. All members of the seed alignment were from unique tol-pal gene regions from completed bacterial genomes. The architecture of this protein is a signal sequence, a low-complexity region usually rich in Asn and Gln, a well-conserved region with tandem repeats that resemble the tetratricopeptide (TPR) repeat, involved in protein-protein interaction. |
| >KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.32 E-value=7.8e-13 Score=126.65 Aligned_cols=108 Identities=21% Similarity=0.281 Sum_probs=103.1
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 460 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (491)
.+..+..+|+.++..++|+.|+..|.+||+++|+ ++.+|.+|+.++.+.++|.+|+.|+.+||+++|...++|+++|.+
T Consensus 3 ~a~e~k~ean~~l~~~~fd~avdlysKaI~ldpn-ca~~~anRa~a~lK~e~~~~Al~Da~kaie~dP~~~K~Y~rrg~a 81 (476)
T KOG0376|consen 3 SAEELKNEANEALKDKVFDVAVDLYSKAIELDPN-CAIYFANRALAHLKVESFGGALHDALKAIELDPTYIKAYVRRGTA 81 (476)
T ss_pred hhhhhhhHHhhhcccchHHHHHHHHHHHHhcCCc-ceeeechhhhhheeechhhhHHHHHHhhhhcCchhhheeeeccHH
Confidence 4667889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHHHccccccccccc
Q 011184 461 LSAMGMENEAQVALKEGTTLEAKKNSTAG 489 (491)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~l~~~~~~~~~ 489 (491)
.+.++++.+|+.+|++...+.|++..+.+
T Consensus 82 ~m~l~~~~~A~~~l~~~~~l~Pnd~~~~r 110 (476)
T KOG0376|consen 82 VMALGEFKKALLDLEKVKKLAPNDPDATR 110 (476)
T ss_pred HHhHHHHHHHHHHHHHhhhcCcCcHHHHH
Confidence 99999999999999999999999887643
|
|
| >KOG4555 consensus TPR repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.4e-11 Score=94.72 Aligned_cols=107 Identities=16% Similarity=0.163 Sum_probs=97.5
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCc----hHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW----HIA 453 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~----~~a 453 (491)
..+....+-.+|..+...|+.+.|++.|.+||.+.|. .+.+|+|++.++..+|+.++|+++.++|+++.-+. -.+
T Consensus 39 ~~e~S~~LEl~~valaE~g~Ld~AlE~F~qal~l~P~-raSayNNRAQa~RLq~~~e~ALdDLn~AleLag~~trtacqa 117 (175)
T KOG4555|consen 39 AIKASRELELKAIALAEAGDLDGALELFGQALCLAPE-RASAYNNRAQALRLQGDDEEALDDLNKALELAGDQTRTACQA 117 (175)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhccc-chHhhccHHHHHHHcCChHHHHHHHHHHHHhcCccchHHHHH
Confidence 4456677888999999999999999999999999999 99999999999999999999999999999998654 358
Q ss_pred HHHHHHHHHHCCChHHHHHHHHHHHccccccc
Q 011184 454 SYLQAAALSAMGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 454 ~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 485 (491)
|..+|.+|..+|+-+.|..+|+.|.+|..+.+
T Consensus 118 ~vQRg~lyRl~g~dd~AR~DFe~AA~LGS~FA 149 (175)
T KOG4555|consen 118 FVQRGLLYRLLGNDDAARADFEAAAQLGSKFA 149 (175)
T ss_pred HHHHHHHHHHhCchHHHHHhHHHHHHhCCHHH
Confidence 99999999999999999999999998876543
|
|
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.5e-11 Score=130.02 Aligned_cols=107 Identities=15% Similarity=0.084 Sum_probs=68.7
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHH
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 459 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (491)
..+..+..+|..++..|++++|+..|+++++++|+ ....|.++|.++..+|++++|+.+|+++++++|+++.+|+++|.
T Consensus 329 ~~a~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~-~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~ 407 (615)
T TIGR00990 329 KEAIALNLRGTFKCLKGKHLEALADLSKSIELDPR-VTQSYIKRASMNLELGDPDKAEEDFDKALKLNSEDPDIYYHRAQ 407 (615)
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 44555666666666666666666666666666666 55666666666666666666666666666666666666666666
Q ss_pred HHHHCCChHHHHHHHHHHHccccccccc
Q 011184 460 ALSAMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 460 ~~~~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
+++.+|++++|+.+|++|++++|++..+
T Consensus 408 ~~~~~g~~~~A~~~~~kal~l~P~~~~~ 435 (615)
T TIGR00990 408 LHFIKGEFAQAGKDYQKSIDLDPDFIFS 435 (615)
T ss_pred HHHHcCCHHHHHHHHHHHHHcCccCHHH
Confidence 6666666666666666666666665443
|
|
| >cd00189 TPR Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and C | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.9e-11 Score=93.81 Aligned_cols=99 Identities=20% Similarity=0.249 Sum_probs=94.5
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHH
Q 011184 384 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 463 (491)
Q Consensus 384 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 463 (491)
.++.+|..++..|++++|+..++++++..|. ...++..+|.++...+++++|+..+++++++.|.+..+++.+|.++..
T Consensus 2 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (100)
T cd00189 2 ALLNLGNLYYKLGDYDEALEYYEKALELDPD-NADAYYNLAAAYYKLGKYEEALEDYEKALELDPDNAKAYYNLGLAYYK 80 (100)
T ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHH
Confidence 5788999999999999999999999999999 778899999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHccccc
Q 011184 464 MGMENEAQVALKEGTTLEAK 483 (491)
Q Consensus 464 ~~~~~~A~~~~~~al~l~~~ 483 (491)
.|++++|...++++++++|+
T Consensus 81 ~~~~~~a~~~~~~~~~~~~~ 100 (100)
T cd00189 81 LGKYEEALEAYEKALELDPN 100 (100)
T ss_pred HHhHHHHHHHHHHHHccCCC
Confidence 99999999999999998874
|
|
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.4e-12 Score=127.26 Aligned_cols=107 Identities=14% Similarity=0.092 Sum_probs=66.5
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 457 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (491)
.+..+++|-..|+.+--+++++.|+++|.+||++||. ..-+|...|.-+..+..|++|...|.+||..+|.+..|||.+
T Consensus 417 ~~~sPesWca~GNcfSLQkdh~~Aik~f~RAiQldp~-faYayTLlGhE~~~~ee~d~a~~~fr~Al~~~~rhYnAwYGl 495 (638)
T KOG1126|consen 417 DPNSPESWCALGNCFSLQKDHDTAIKCFKRAIQLDPR-FAYAYTLLGHESIATEEFDKAMKSFRKALGVDPRHYNAWYGL 495 (638)
T ss_pred CCCCcHHHHHhcchhhhhhHHHHHHHHHHHhhccCCc-cchhhhhcCChhhhhHHHHhHHHHHHhhhcCCchhhHHHHhh
Confidence 4455667777777777777777777777777777776 444455555555555555555555555555555555555555
Q ss_pred HHHHHHCCChHHHHHHHHHHHccccccc
Q 011184 458 AAALSAMGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 458 g~~~~~~~~~~~A~~~~~~al~l~~~~~ 485 (491)
|.+|+++++++.|.-.|++|++++|.+.
T Consensus 496 G~vy~Kqek~e~Ae~~fqkA~~INP~ns 523 (638)
T KOG1126|consen 496 GTVYLKQEKLEFAEFHFQKAVEINPSNS 523 (638)
T ss_pred hhheeccchhhHHHHHHHhhhcCCccch
Confidence 5555555555555555555555555543
|
|
| >PRK02603 photosystem I assembly protein Ycf3; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.9e-11 Score=104.46 Aligned_cols=109 Identities=17% Similarity=0.115 Sum_probs=99.2
Q ss_pred hhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC--cHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHH
Q 011184 377 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIAS 454 (491)
Q Consensus 377 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~ 454 (491)
.....+..++.+|..+...|++++|+..|+++++..|+. ...++.++|.++..+|++++|+..+++++++.|++..++
T Consensus 30 ~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 109 (172)
T PRK02603 30 KKAKEAFVYYRDGMSAQADGEYAEALENYEEALKLEEDPNDRSYILYNMGIIYASNGEHDKALEYYHQALELNPKQPSAL 109 (172)
T ss_pred cHhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHH
Confidence 345778889999999999999999999999999887752 246899999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCC--------------hHHHHHHHHHHHccccccc
Q 011184 455 YLQAAALSAMGM--------------ENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 455 ~~~g~~~~~~~~--------------~~~A~~~~~~al~l~~~~~ 485 (491)
..+|.++..+|+ +++|++.++++++++|++-
T Consensus 110 ~~lg~~~~~~g~~~~a~~~~~~A~~~~~~A~~~~~~a~~~~p~~~ 154 (172)
T PRK02603 110 NNIAVIYHKRGEKAEEAGDQDEAEALFDKAAEYWKQAIRLAPNNY 154 (172)
T ss_pred HHHHHHHHHcCChHhHhhCHHHHHHHHHHHHHHHHHHHhhCchhH
Confidence 999999999998 7889999999999999864
|
|
| >PF12895 Apc3: Anaphase-promoting complex, cyclosome, subunit 3; PDB: 3KAE_D 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2XPI_A 3ULQ_A | Back alignment and domain information |
|---|
Probab=99.28 E-value=9.3e-12 Score=94.92 Aligned_cols=83 Identities=20% Similarity=0.294 Sum_probs=75.1
Q ss_pred HhcCHHHHHHHHHHHHhcCCCC-cHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHCCChHHHHH
Q 011184 394 RQKDLKDAIECYTQFIDAGTMV-SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQV 472 (491)
Q Consensus 394 ~~~~~~~A~~~~~~al~~~p~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~ 472 (491)
..|+|+.|+..|+++++.+|.+ +..+++++|.||.++|+|++|+..+++ ++.+|.+...++.+|.+++++|+|++|++
T Consensus 1 ~~~~y~~Ai~~~~k~~~~~~~~~~~~~~~~la~~~~~~~~y~~A~~~~~~-~~~~~~~~~~~~l~a~~~~~l~~y~eAi~ 79 (84)
T PF12895_consen 1 DQGNYENAIKYYEKLLELDPTNPNSAYLYNLAQCYFQQGKYEEAIELLQK-LKLDPSNPDIHYLLARCLLKLGKYEEAIK 79 (84)
T ss_dssp HTT-HHHHHHHHHHHHHHHCGTHHHHHHHHHHHHHHHTTHHHHHHHHHHC-HTHHHCHHHHHHHHHHHHHHTT-HHHHHH
T ss_pred CCccHHHHHHHHHHHHHHCCCChhHHHHHHHHHHHHHCCCHHHHHHHHHH-hCCCCCCHHHHHHHHHHHHHhCCHHHHHH
Confidence 3689999999999999999963 566788899999999999999999999 99999999999999999999999999999
Q ss_pred HHHHH
Q 011184 473 ALKEG 477 (491)
Q Consensus 473 ~~~~a 477 (491)
.|++|
T Consensus 80 ~l~~~ 84 (84)
T PF12895_consen 80 ALEKA 84 (84)
T ss_dssp HHHHH
T ss_pred HHhcC
Confidence 99986
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.7e-11 Score=110.08 Aligned_cols=140 Identities=18% Similarity=0.182 Sum_probs=107.1
Q ss_pred ccCCCCCccEEEEEEECCCCEEEEEEeCCCCC-CChhHHHHHHHHHhccCC--CCcceEEeEeecC---CeeEEEEecCC
Q 011184 63 SEHGEKAPNVVYKGKLENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRN--NRLTNLLGCCCEG---DERLLVAEYMP 136 (491)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H--~niv~~~~~~~~~---~~~~lv~e~~~ 136 (491)
..+|.|..+.||++...+|..+++|....... .....+.+|+++++.+.+ .++++++.+.... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 45688999999999986678899999765432 134578999999999975 4567788877654 25689999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhC------------------------------------------
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK------------------------------------------ 174 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~------------------------------------------ 174 (491)
|.++.+.+. ...++......++.+++.+|..||+.
T Consensus 84 G~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 84 GRVLRDRLL---RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred CEecCCCCC---CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 988876552 13466677777778888888877741
Q ss_pred -------------CCcccccccccceeeCC--CCCeEEccCCCccc
Q 011184 175 -------------GRALYHDLNAYRILFDE--DGNPRLSTFGLMKN 205 (491)
Q Consensus 175 -------------~~iiH~Dlkp~Nill~~--~~~~kl~Dfgla~~ 205 (491)
..++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 11689999999999998 56689999998764
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.28 E-value=6.6e-11 Score=100.35 Aligned_cols=131 Identities=19% Similarity=0.198 Sum_probs=96.9
Q ss_pred cCCCCCccEEEEEEECCCCEEEEEEeCCCCCCC--------hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 64 EHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--------PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
.+++|+-+.+|.+.+. |..+++|.=.+..... ..+..+|+.++.+++--.|..-.=+..+.+...|+|||+
T Consensus 3 ~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 3578899999999764 4456677532222111 134678999999997655555444555666778999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccC
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 206 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 206 (491)
+|..|.+.+.. . ...++..|-.-+.-||..| |+|+||.++||++...+ +.++|||++...
T Consensus 82 ~G~~lkd~l~~---~------~~~~~r~vG~~vg~lH~~g-ivHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 82 EGELLKDALEE---A------RPDLLREVGRLVGKLHKAG-IVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred CChhHHHHHHh---c------chHHHHHHHHHHHHHHhcC-eecCCCccceEEEeCCc-EEEEECCccccc
Confidence 99999988853 1 2455667777778899999 99999999999998765 999999998753
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.8e-11 Score=100.64 Aligned_cols=142 Identities=15% Similarity=0.149 Sum_probs=103.8
Q ss_pred ccCCCCCccEEEEEEECCCCEEEEEEeCCCCCC--------ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 63 SEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP--------DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
..+-+|+-+.|+++.+ .|+.+.||.=...... ...+..+|+++|.+++--.|.--.-++.+...-.|+|||
T Consensus 13 ~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~ 91 (229)
T KOG3087|consen 13 ELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEF 91 (229)
T ss_pred eeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEe
Confidence 4446788889999998 5677777763221111 124577899999998765665555555666667899999
Q ss_pred CCC-CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC---CeEEccCCCcccC
Q 011184 135 MPN-ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG---NPRLSTFGLMKNS 206 (491)
Q Consensus 135 ~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~---~~kl~Dfgla~~~ 206 (491)
++| .++.+++...............++..|-..+.-||..+ +||+||..+||++..++ .+.++|||++...
T Consensus 92 ~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd-iiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 92 IDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND-IIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred ccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC-eecccccccceEEecCCCcCceEEEeecchhcc
Confidence 986 48888887543333444444778899999999999998 99999999999996544 3589999997653
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.3e-10 Score=112.49 Aligned_cols=215 Identities=19% Similarity=0.181 Sum_probs=155.5
Q ss_pred ccEEEEEE-ECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeec----CCeeEEEEecCCC-CCHHHH
Q 011184 70 PNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE----GDERLLVAEYMPN-ETLAKH 143 (491)
Q Consensus 70 ~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~----~~~~~lv~e~~~~-gsL~~~ 143 (491)
..+.|++. ..+|..|++|+++............-++.++++.|+|||++..+|.. +..+++|++|.|+ ++|.+.
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 36789998 55799999999955444344344566899999999999999999873 3568999999986 577775
Q ss_pred hccc-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC
Q 011184 144 LFHW-------------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 210 (491)
Q Consensus 144 l~~~-------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 210 (491)
-... .+...++..+|.++.|+..||.++|+.| +..+-|.|.+||++.+.+++|+..|+........
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG-LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~ 447 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG-LACKTLDLKKILVTGKMRIRISGCGIMDVLQEDP 447 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC-ceeecccHhHeEeeCcceEEEecccceeeecCCC
Confidence 4321 1224578899999999999999999999 9889999999999999999999888765543322
Q ss_pred ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 211 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
. +.+. ---+-|.=.||.+++-|.||..-.... +...... ...+....+.++++++.
T Consensus 448 --------~--~~le---~~Qq~D~~~lG~ll~aLAt~~~ns~~~--d~~~~s~---------~~~I~~~yS~D~rn~v~ 503 (655)
T KOG3741|consen 448 --------T--EPLE---SQQQNDLRDLGLLLLALATGTENSNRT--DSTQSSH---------LTRITTTYSTDLRNVVE 503 (655)
T ss_pred --------C--cchh---HHhhhhHHHHHHHHHHHhhcccccccc--cchHHHH---------HHHhhhhhhHHHHHHHH
Confidence 0 1111 112678899999999999996421110 0011100 11223456678999999
Q ss_pred HhccCCCCCCCChhHHHHHh
Q 011184 291 RCLQYEPRERPNPKSLVTAL 310 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~L 310 (491)
.....++.+ -+..+++.++
T Consensus 504 yl~s~~~~~-ksI~~llp~~ 522 (655)
T KOG3741|consen 504 YLESLNFRE-KSIQDLLPMI 522 (655)
T ss_pred HHHhcCccc-ccHHHHHHHH
Confidence 999999887 6788887654
|
|
| >PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=3.5e-11 Score=130.61 Aligned_cols=105 Identities=7% Similarity=-0.138 Sum_probs=101.3
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 460 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (491)
++..+.+.|.++.+.|++++|+..|+++++++|+ ++.+++++|.++...|++++|+..|++|++++|+++.+++++|.+
T Consensus 608 ~~~a~~~LA~~l~~lG~~deA~~~l~~AL~l~Pd-~~~a~~nLG~aL~~~G~~eeAi~~l~~AL~l~P~~~~a~~nLA~a 686 (987)
T PRK09782 608 SANAYVARATIYRQRHNVPAAVSDLRAALELEPN-NSNYQAALGYALWDSGDIAQSREMLERAHKGLPDDPALIRQLAYV 686 (987)
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 4778999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHHHcccccccc
Q 011184 461 LSAMGMENEAQVALKEGTTLEAKKNS 486 (491)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~l~~~~~~ 486 (491)
+..+|++++|+.+|++|++++|++..
T Consensus 687 l~~lGd~~eA~~~l~~Al~l~P~~a~ 712 (987)
T PRK09782 687 NQRLDDMAATQHYARLVIDDIDNQAL 712 (987)
T ss_pred HHHCCCHHHHHHHHHHHHhcCCCCch
Confidence 99999999999999999999998764
|
|
| >KOG0545 consensus Aryl-hydrocarbon receptor-interacting protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.8e-11 Score=105.58 Aligned_cols=111 Identities=19% Similarity=0.173 Sum_probs=99.6
Q ss_pred hhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHH--------hcCCCC---------cHHHHhhHHHHHHhcCChHHHHHH
Q 011184 377 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFI--------DAGTMV---------SPTVYARRSLCYLMSDMPQDALND 439 (491)
Q Consensus 377 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al--------~~~p~~---------~~~~~~~~~~~~~~~~~~~~A~~~ 439 (491)
+.+.....+..+|+.+|+.|+|.+|...|..|| +..|.+ ...++.|.+.|++..|+|-++++.
T Consensus 173 eKmkav~~l~q~GN~lfk~~~ykEA~~~YreAi~~l~~L~lkEkP~e~eW~eLdk~~tpLllNy~QC~L~~~e~yevleh 252 (329)
T KOG0545|consen 173 EKMKAVPVLHQEGNRLFKLGRYKEASSKYREAIICLRNLQLKEKPGEPEWLELDKMITPLLLNYCQCLLKKEEYYEVLEH 252 (329)
T ss_pred HhhhhhHHHHHhhhhhhhhccHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhhhHHHHhHHHHHhhHHHHHHHHHH
Confidence 466788899999999999999999999999997 334441 234588999999999999999999
Q ss_pred HHHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHccccccccc
Q 011184 440 AMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 440 ~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
+..+|...|.|.+|||++|.+....-+..+|.++|+++|+++|.-+..
T Consensus 253 ~seiL~~~~~nvKA~frRakAhaa~Wn~~eA~~D~~~vL~ldpslasv 300 (329)
T KOG0545|consen 253 CSEILRHHPGNVKAYFRRAKAHAAVWNEAEAKADLQKVLELDPSLASV 300 (329)
T ss_pred HHHHHhcCCchHHHHHHHHHHHHhhcCHHHHHHHHHHHHhcChhhHHH
Confidence 999999999999999999999999999999999999999999987654
|
|
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=7.5e-11 Score=112.67 Aligned_cols=100 Identities=11% Similarity=0.004 Sum_probs=72.9
Q ss_pred hhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHH
Q 011184 377 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 456 (491)
Q Consensus 377 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 456 (491)
..+.++..++.+|..+...|+|++|++.|++|++++|+ +..++.++|.++...|++++|+++|+++++++|+++.....
T Consensus 93 l~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~l~~~g~~~eA~~~~~~al~~~P~~~~~~~~ 171 (296)
T PRK11189 93 LRPDMADAYNYLGIYLTQAGNFDAAYEAFDSVLELDPT-YNYAYLNRGIALYYGGRYELAQDDLLAFYQDDPNDPYRALW 171 (296)
T ss_pred cCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 34566788889999999999999999999999999998 77888889998888899999988888888888776421111
Q ss_pred HHHHHHHCCChHHHHHHHHHHH
Q 011184 457 QAAALSAMGMENEAQVALKEGT 478 (491)
Q Consensus 457 ~g~~~~~~~~~~~A~~~~~~al 478 (491)
. ......+++++|++.|.+++
T Consensus 172 ~-~l~~~~~~~~~A~~~l~~~~ 192 (296)
T PRK11189 172 L-YLAESKLDPKQAKENLKQRY 192 (296)
T ss_pred H-HHHHccCCHHHHHHHHHHHH
Confidence 1 11223445555555554444
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.25 E-value=4e-12 Score=132.08 Aligned_cols=245 Identities=18% Similarity=0.129 Sum_probs=174.1
Q ss_pred cCCccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCC---CCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeE
Q 011184 54 SGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 129 (491)
Q Consensus 54 ~~~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~ 129 (491)
..++...+++-+-+|+++.++.+. -..|...++|+.... ...+.+....+-.++-..+||-+++...-+......+
T Consensus 801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~ 880 (1205)
T KOG0606|consen 801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLP 880 (1205)
T ss_pred CCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcc
Confidence 345555666777899999998887 333544555544321 1112223333434433345566666655556667789
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC--
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR-- 207 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~-- 207 (491)
|+++|..|++|...++. ....+..-....+..+...+++||+.. ++|+|++|.|+|+..+|..++.|||......
T Consensus 881 L~~~~~~~~~~~Skl~~--~~~~saepaRs~i~~~vqs~e~L~s~~-r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~ 957 (1205)
T KOG0606|consen 881 LVGHYLNGGDLPSKLHN--SGCLSAEPARSPILERVQSLESLHSSL-RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLI 957 (1205)
T ss_pred hhhHHhccCCchhhhhc--CCCcccccccchhHHHHhhhhccccch-hhcccccccchhhcccCCcccCccccccccccc
Confidence 99999999999998873 345555566667778889999999987 8999999999999999999999998432110
Q ss_pred -----C----------------------------CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCC
Q 011184 208 -----D----------------------------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 254 (491)
Q Consensus 208 -----~----------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~ 254 (491)
. .....+|+.|.+||...+......+|.|++|++++|.++|.+||..
T Consensus 958 ~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na 1037 (1205)
T KOG0606|consen 958 PPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNA 1037 (1205)
T ss_pred cCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCC
Confidence 0 0122468899999999999999999999999999999999988876
Q ss_pred chhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChh
Q 011184 255 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 304 (491)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ 304 (491)
.....+-+....... ....-+...+.+.++++...+..+|.+|..+.
T Consensus 1038 ~tpq~~f~ni~~~~~---~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1038 ETPQQIFENILNRDI---PWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred cchhhhhhccccCCC---CCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 655444433333322 22233455668899999999999999997665
|
|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=5.5e-11 Score=123.71 Aligned_cols=107 Identities=16% Similarity=0.062 Sum_probs=71.5
Q ss_pred hHHHHHhHHHHHHHHHH---------hcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCC
Q 011184 378 QMQETLNSKKKGDVAFR---------QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISP 448 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~---------~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p 448 (491)
.+..+..+..+|..+.. .+++++|+..+++|++++|+ ++.++..+|.++...|++++|+..|++|++++|
T Consensus 291 dP~~a~a~~~La~~~~~~~~~g~~~~~~~~~~A~~~~~~Al~ldP~-~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P 369 (553)
T PRK12370 291 SPNSIAPYCALAECYLSMAQMGIFDKQNAMIKAKEHAIKATELDHN-NPQALGLLGLINTIHSEYIVGSLLFKQANLLSP 369 (553)
T ss_pred CCccHHHHHHHHHHHHHHHHcCCcccchHHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 33445555555554432 23466777777777777776 666666777777777777777777777777777
Q ss_pred CchHHHHHHHHHHHHCCChHHHHHHHHHHHccccccc
Q 011184 449 IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 449 ~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 485 (491)
+++.+|+++|.++..+|++++|+..|++|++++|.+.
T Consensus 370 ~~~~a~~~lg~~l~~~G~~~eAi~~~~~Al~l~P~~~ 406 (553)
T PRK12370 370 ISADIKYYYGWNLFMAGQLEEALQTINECLKLDPTRA 406 (553)
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCh
Confidence 7777777777777777777777777777777777654
|
|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.1e-10 Score=111.34 Aligned_cols=107 Identities=15% Similarity=0.146 Sum_probs=101.3
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 460 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (491)
-++++.-+|.-++-.|++..|.+.|+++|.++|. +...|..+|.+|....+.++-..+|++|..+||++++.||.+|..
T Consensus 325 ~A~al~~~gtF~fL~g~~~~a~~d~~~~I~l~~~-~~~lyI~~a~~y~d~~~~~~~~~~F~~A~~ldp~n~dvYyHRgQm 403 (606)
T KOG0547|consen 325 MAEALLLRGTFHFLKGDSLGAQEDFDAAIKLDPA-FNSLYIKRAAAYADENQSEKMWKDFNKAEDLDPENPDVYYHRGQM 403 (606)
T ss_pred HHHHHHHhhhhhhhcCCchhhhhhHHHHHhcCcc-cchHHHHHHHHHhhhhccHHHHHHHHHHHhcCCCCCchhHhHHHH
Confidence 3788999999999999999999999999999999 667799999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHHHcccccccccc
Q 011184 461 LSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
++-+++|++|+.+|++|+.|+|.+.=+.
T Consensus 404 ~flL~q~e~A~aDF~Kai~L~pe~~~~~ 431 (606)
T KOG0547|consen 404 RFLLQQYEEAIADFQKAISLDPENAYAY 431 (606)
T ss_pred HHHHHHHHHHHHHHHHHhhcChhhhHHH
Confidence 9999999999999999999999986544
|
|
| >CHL00033 ycf3 photosystem I assembly protein Ycf3 | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.1e-10 Score=100.10 Aligned_cols=108 Identities=16% Similarity=0.076 Sum_probs=93.9
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC--CcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTM--VSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 455 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~--~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 455 (491)
....+..++..|..+...|+|++|+..|++|+.+.|+ +...++.++|.++...|++++|+..|++|++++|.+..++.
T Consensus 31 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~~~~~~~~~~~ 110 (168)
T CHL00033 31 GEKEAFTYYRDGMSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFQALERNPFLPQALN 110 (168)
T ss_pred hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHH
Confidence 3456888999999999999999999999999988765 23458999999999999999999999999999999999999
Q ss_pred HHHHHHH-------HCCChH-------HHHHHHHHHHccccccc
Q 011184 456 LQAAALS-------AMGMEN-------EAQVALKEGTTLEAKKN 485 (491)
Q Consensus 456 ~~g~~~~-------~~~~~~-------~A~~~~~~al~l~~~~~ 485 (491)
++|.++. .+|+++ +|+..|++++.++|.+.
T Consensus 111 ~la~i~~~~~~~~~~~g~~~~A~~~~~~a~~~~~~a~~~~p~~~ 154 (168)
T CHL00033 111 NMAVICHYRGEQAIEQGDSEIAEAWFDQAAEYWKQAIALAPGNY 154 (168)
T ss_pred HHHHHHHHhhHHHHHcccHHHHHHHHHHHHHHHHHHHHhCcccH
Confidence 9999999 777876 66666667888888654
|
|
| >PRK15331 chaperone protein SicA; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.1e-10 Score=97.44 Aligned_cols=104 Identities=9% Similarity=-0.050 Sum_probs=97.9
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHH
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 459 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (491)
...+..+..|..+|+.|+|++|...|+-....+|. ++.++..+|.|+..+++|++|+..|..|..++++++...|..|.
T Consensus 35 ~~le~iY~~Ay~~y~~Gk~~eA~~~F~~L~~~d~~-n~~Y~~GLaa~~Q~~k~y~~Ai~~Y~~A~~l~~~dp~p~f~agq 113 (165)
T PRK15331 35 DMMDGLYAHAYEFYNQGRLDEAETFFRFLCIYDFY-NPDYTMGLAAVCQLKKQFQKACDLYAVAFTLLKNDYRPVFFTGQ 113 (165)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCccchHHH
Confidence 45678899999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHHHccccccc
Q 011184 460 ALSAMGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 460 ~~~~~~~~~~A~~~~~~al~l~~~~~ 485 (491)
||+.+|+.++|+.+|..|++ .|.+.
T Consensus 114 C~l~l~~~~~A~~~f~~a~~-~~~~~ 138 (165)
T PRK15331 114 CQLLMRKAAKARQCFELVNE-RTEDE 138 (165)
T ss_pred HHHHhCCHHHHHHHHHHHHh-CcchH
Confidence 99999999999999999998 45443
|
|
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.7e-11 Score=119.86 Aligned_cols=104 Identities=11% Similarity=0.084 Sum_probs=59.9
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 460 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (491)
.+.+|--+|..+....+|+.|..+|++||..+|. .+.+|+.+|++|.++++++.|.-+|++|++++|.+.......|.+
T Consensus 454 faYayTLlGhE~~~~ee~d~a~~~fr~Al~~~~r-hYnAwYGlG~vy~Kqek~e~Ae~~fqkA~~INP~nsvi~~~~g~~ 532 (638)
T KOG1126|consen 454 FAYAYTLLGHESIATEEFDKAMKSFRKALGVDPR-HYNAWYGLGTVYLKQEKLEFAEFHFQKAVEINPSNSVILCHIGRI 532 (638)
T ss_pred cchhhhhcCChhhhhHHHHhHHHHHHhhhcCCch-hhHHHHhhhhheeccchhhHHHHHHHhhhcCCccchhHHhhhhHH
Confidence 3445555555555555555555555555555555 555555555555555555555555555555555555555555555
Q ss_pred HHHCCChHHHHHHHHHHHccccccc
Q 011184 461 LSAMGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~l~~~~~ 485 (491)
+.++|+.++|+..|++|+.+||++.
T Consensus 533 ~~~~k~~d~AL~~~~~A~~ld~kn~ 557 (638)
T KOG1126|consen 533 QHQLKRKDKALQLYEKAIHLDPKNP 557 (638)
T ss_pred HHHhhhhhHHHHHHHHHHhcCCCCc
Confidence 5555555555555555555555554
|
|
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.2e-10 Score=98.54 Aligned_cols=90 Identities=16% Similarity=0.010 Sum_probs=83.8
Q ss_pred hhhhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHH
Q 011184 375 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIAS 454 (491)
Q Consensus 375 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~ 454 (491)
+...+.++..+..+|.++...|+|++|+..|++|++++|+ ++.+++++|.++..+|++++|+..|++|++++|+++.++
T Consensus 51 l~~~P~~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~-~~~a~~~lg~~l~~~g~~~eAi~~~~~Al~~~p~~~~~~ 129 (144)
T PRK15359 51 VMAQPWSWRAHIALAGTWMMLKEYTTAINFYGHALMLDAS-HPEPVYQTGVCLKMMGEPGLAREAFQTAIKMSYADASWS 129 (144)
T ss_pred HHcCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHH
Confidence 3445678899999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCC
Q 011184 455 YLQAAALSAMG 465 (491)
Q Consensus 455 ~~~g~~~~~~~ 465 (491)
.++|.++..++
T Consensus 130 ~~~~~~~~~l~ 140 (144)
T PRK15359 130 EIRQNAQIMVD 140 (144)
T ss_pred HHHHHHHHHHH
Confidence 99999886553
|
|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.1e-10 Score=119.40 Aligned_cols=109 Identities=9% Similarity=-0.072 Sum_probs=91.8
Q ss_pred hhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHH
Q 011184 377 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 456 (491)
Q Consensus 377 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 456 (491)
-.+.++..+..+|..+...|++++|+..|++|++++|+ ++.+++++|.++...|++++|+..+++|++++|.++.+++.
T Consensus 333 ldP~~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~l~~~G~~~eAi~~~~~Al~l~P~~~~~~~~ 411 (553)
T PRK12370 333 LDHNNPQALGLLGLINTIHSEYIVGSLLFKQANLLSPI-SADIKYYYGWNLFMAGQLEEALQTINECLKLDPTRAAAGIT 411 (553)
T ss_pred cCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCChhhHHH
Confidence 34567778888888888899999999999999999998 88888888999999999999999999999999998888777
Q ss_pred HHHHHHHCCChHHHHHHHHHHHccc-ccccc
Q 011184 457 QAAALSAMGMENEAQVALKEGTTLE-AKKNS 486 (491)
Q Consensus 457 ~g~~~~~~~~~~~A~~~~~~al~l~-~~~~~ 486 (491)
++.+++.+|++++|++.++++++.+ |.+..
T Consensus 412 ~~~~~~~~g~~eeA~~~~~~~l~~~~p~~~~ 442 (553)
T PRK12370 412 KLWITYYHTGIDDAIRLGDELRSQHLQDNPI 442 (553)
T ss_pred HHHHHHhccCHHHHHHHHHHHHHhccccCHH
Confidence 7777888889999999999888775 54443
|
|
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=4.1e-10 Score=104.86 Aligned_cols=132 Identities=12% Similarity=0.116 Sum_probs=98.2
Q ss_pred EEEEEEECCCCEEEEEEeCCCCCC-----------ChhHHHHHHHHHhccCCCCc--ceEEeEeec-----CCeeEEEEe
Q 011184 72 VVYKGKLENQRRIAVKRFNRMAWP-----------DPRQFLEEARSVGQLRNNRL--TNLLGCCCE-----GDERLLVAE 133 (491)
Q Consensus 72 ~Vy~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~ni--v~~~~~~~~-----~~~~~lv~e 133 (491)
.|.+..+ +|+.|.||......+. ....+.+|...+.+|...+| +..+++... ....+||||
T Consensus 37 rvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte 115 (268)
T PRK15123 37 RTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITE 115 (268)
T ss_pred eEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEe
Confidence 4667666 5778999987543321 11147899999999854443 444555533 234689999
Q ss_pred cCCCC-CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC-------CCCeEEccCCCccc
Q 011184 134 YMPNE-TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-------DGNPRLSTFGLMKN 205 (491)
Q Consensus 134 ~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~-------~~~~kl~Dfgla~~ 205 (491)
++++. +|.+++......+.+......++.+++..+.-||..| |+|+|+++.|||++. ++.+.|+||+.+..
T Consensus 116 ~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G-i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 116 DLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG-INHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred eCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc-CccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 99975 8999885433345566777899999999999999999 999999999999975 46799999998753
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.4e-10 Score=119.55 Aligned_cols=105 Identities=11% Similarity=-0.039 Sum_probs=71.4
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 457 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (491)
.+....+....|.++.+.+++++|+..+++++..+|+ ++.+++.+|.++.++|++++|++.|++++..+|+++.++..+
T Consensus 116 ~Pd~~~a~~~~a~~L~~~~~~eeA~~~~~~~l~~~p~-~~~~~~~~a~~l~~~g~~~~A~~~y~~~~~~~p~~~~~~~~~ 194 (694)
T PRK15179 116 FPDSSEAFILMLRGVKRQQGIEAGRAEIELYFSGGSS-SAREILLEAKSWDEIGQSEQADACFERLSRQHPEFENGYVGW 194 (694)
T ss_pred CCCcHHHHHHHHHHHHHhccHHHHHHHHHHHhhcCCC-CHHHHHHHHHHHHHhcchHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 4455666666666666677777777777777777776 666666666777777777777777777766666666677777
Q ss_pred HHHHHHCCChHHHHHHHHHHHccccc
Q 011184 458 AAALSAMGMENEAQVALKEGTTLEAK 483 (491)
Q Consensus 458 g~~~~~~~~~~~A~~~~~~al~l~~~ 483 (491)
|.++..+|+.++|..+|++|++....
T Consensus 195 a~~l~~~G~~~~A~~~~~~a~~~~~~ 220 (694)
T PRK15179 195 AQSLTRRGALWRARDVLQAGLDAIGD 220 (694)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhhCc
Confidence 77777777777777777776665443
|
|
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.15 E-value=6.5e-10 Score=96.80 Aligned_cols=102 Identities=14% Similarity=-0.004 Sum_probs=97.0
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHH
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 459 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (491)
..+.....+|..|++.||+..|.+.+++||+.||+ ++.+|.-+|.+|.++|+.+.|-+.|++|+.++|++.+.++|.|.
T Consensus 33 ~aa~arlqLal~YL~~gd~~~A~~nlekAL~~DPs-~~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~~GdVLNNYG~ 111 (250)
T COG3063 33 EAAKARLQLALGYLQQGDYAQAKKNLEKALEHDPS-YYLAHLVRAHYYQKLGENDLADESYRKALSLAPNNGDVLNNYGA 111 (250)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCCccchhhhhhH
Confidence 45678889999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHHHccccc
Q 011184 460 ALSAMGMENEAQVALKEGTTLEAK 483 (491)
Q Consensus 460 ~~~~~~~~~~A~~~~~~al~l~~~ 483 (491)
.++.+|+|++|...|.+|+. +|.
T Consensus 112 FLC~qg~~~eA~q~F~~Al~-~P~ 134 (250)
T COG3063 112 FLCAQGRPEEAMQQFERALA-DPA 134 (250)
T ss_pred HHHhCCChHHHHHHHHHHHh-CCC
Confidence 99999999999999999985 443
|
|
| >TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO | Back alignment and domain information |
|---|
Probab=99.14 E-value=3.2e-10 Score=104.93 Aligned_cols=107 Identities=17% Similarity=0.103 Sum_probs=98.2
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcH---HHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchH---H
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP---TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI---A 453 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~---~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~---a 453 (491)
..+..++.+|..+++.|+|++|+..|++++..+|+ ++ .+++.+|.+|...|++++|+..|+++++.+|+++. +
T Consensus 31 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~a~~~la~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a 109 (235)
T TIGR03302 31 WPAEELYEEAKEALDSGDYTEAIKYFEALESRYPF-SPYAEQAQLDLAYAYYKSGDYAEAIAAADRFIRLHPNHPDADYA 109 (235)
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCchHHH
Confidence 45668899999999999999999999999999998 54 57899999999999999999999999999998876 7
Q ss_pred HHHHHHHHHHC--------CChHHHHHHHHHHHccccccccc
Q 011184 454 SYLQAAALSAM--------GMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 454 ~~~~g~~~~~~--------~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
++.+|.++..+ |++++|++.|+++++.+|++..+
T Consensus 110 ~~~~g~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~ 151 (235)
T TIGR03302 110 YYLRGLSNYNQIDRVDRDQTAAREAFEAFQELIRRYPNSEYA 151 (235)
T ss_pred HHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHCCCChhH
Confidence 99999999987 89999999999999999998654
|
Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795). |
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.3e-10 Score=83.80 Aligned_cols=63 Identities=19% Similarity=0.082 Sum_probs=42.2
Q ss_pred hHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHcccccc
Q 011184 422 RRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 484 (491)
Q Consensus 422 ~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 484 (491)
.+|..+...|++++|++.|+++++.+|+++.+|+.+|.++..+|++++|+..|+++++++|++
T Consensus 2 ~~a~~~~~~g~~~~A~~~~~~~l~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~ 64 (65)
T PF13432_consen 2 ALARALYQQGDYDEAIAAFEQALKQDPDNPEAWYLLGRILYQQGRYDEALAYYERALELDPDN 64 (65)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-
T ss_pred hHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCC
Confidence 356666666777777777777777777777777777777777777777777777777666664
|
|
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.9e-10 Score=100.59 Aligned_cols=94 Identities=16% Similarity=0.099 Sum_probs=88.0
Q ss_pred HhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHH-HHCCC--hHHH
Q 011184 394 RQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL-SAMGM--ENEA 470 (491)
Q Consensus 394 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~-~~~~~--~~~A 470 (491)
..++.++++..+.++++.+|+ +...|..+|.+|..+|++++|+..|++|++++|+++.+++.+|.++ ...|+ +++|
T Consensus 51 ~~~~~~~~i~~l~~~L~~~P~-~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~~~~~~~~lA~aL~~~~g~~~~~~A 129 (198)
T PRK10370 51 SQQTPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWRNDYDNALLAYRQALQLRGENAELYAALATVLYYQAGQHMTPQT 129 (198)
T ss_pred CchhHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCcHHH
Confidence 367889999999999999999 9999999999999999999999999999999999999999999985 67787 5999
Q ss_pred HHHHHHHHcccccccccc
Q 011184 471 QVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 471 ~~~~~~al~l~~~~~~~~ 488 (491)
.+.|++|++++|++..++
T Consensus 130 ~~~l~~al~~dP~~~~al 147 (198)
T PRK10370 130 REMIDKALALDANEVTAL 147 (198)
T ss_pred HHHHHHHHHhCCCChhHH
Confidence 999999999999997764
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.9e-10 Score=99.77 Aligned_cols=126 Identities=17% Similarity=0.205 Sum_probs=83.1
Q ss_pred EEEEEECCCCEEEEEEeCCCCCC---------------------C-----hhHHHHHHHHHhccCCC--CcceEEeEeec
Q 011184 73 VYKGKLENQRRIAVKRFNRMAWP---------------------D-----PRQFLEEARSVGQLRNN--RLTNLLGCCCE 124 (491)
Q Consensus 73 Vy~~~~~~~~~vavK~~~~~~~~---------------------~-----~~~~~~E~~~l~~l~H~--niv~~~~~~~~ 124 (491)
||.|...+|..+|||+.+..... . .....+|.+.|.++..- ++++++.+-
T Consensus 2 Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~-- 79 (188)
T PF01163_consen 2 VYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN-- 79 (188)
T ss_dssp EEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE--
T ss_pred EEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe--
Confidence 89999888999999998542211 0 12366899999999755 577777653
Q ss_pred CCeeEEEEecCC--CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHH-HHhCCCcccccccccceeeCCCCCeEEccCC
Q 011184 125 GDERLLVAEYMP--NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEY-CTSKGRALYHDLNAYRILFDEDGNPRLSTFG 201 (491)
Q Consensus 125 ~~~~~lv~e~~~--~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~-LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg 201 (491)
..+|||||++ |..+..+.. ..++......++.+++..+.. +|..| ++|+||.+.|||++++ .+.++|||
T Consensus 80 --~~~ivME~I~~~G~~~~~l~~----~~~~~~~~~~~~~~il~~~~~~~~~~g-ivHGDLs~~NIlv~~~-~~~iIDf~ 151 (188)
T PF01163_consen 80 --RNVIVMEYIGEDGVPLPRLKD----VDLSPEEPKELLEEILEEIIKMLHKAG-IVHGDLSEYNILVDDG-KVYIIDFG 151 (188)
T ss_dssp --TTEEEEE--EETTEEGGCHHH----CGGGGSTHHHHHHHHHHHHHHHHHCTT-EEESS-STTSEEEETT-CEEE--GT
T ss_pred --CCEEEEEecCCCccchhhHHh----ccccchhHHHHHHHHHHHHHHHHHhcC-ceecCCChhhEEeecc-eEEEEecC
Confidence 2379999998 655544332 111133455667788775555 47888 9999999999999987 89999999
Q ss_pred CcccCCC
Q 011184 202 LMKNSRD 208 (491)
Q Consensus 202 la~~~~~ 208 (491)
.+.....
T Consensus 152 qav~~~~ 158 (188)
T PF01163_consen 152 QAVDSSH 158 (188)
T ss_dssp TEEETTS
T ss_pred cceecCC
Confidence 8876543
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >COG5010 TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.12 E-value=7.3e-10 Score=98.55 Aligned_cols=108 Identities=11% Similarity=-0.015 Sum_probs=99.2
Q ss_pred hhhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHH
Q 011184 376 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 455 (491)
Q Consensus 376 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 455 (491)
+....+...+..+|...++.|+|.+|+..+.+|..++|+ +..+|+.+|.+|.++|++++|-..|.+|+++.|+.+.+..
T Consensus 94 ~~~~~d~~ll~~~gk~~~~~g~~~~A~~~~rkA~~l~p~-d~~~~~~lgaaldq~Gr~~~Ar~ay~qAl~L~~~~p~~~n 172 (257)
T COG5010 94 IAYPKDRELLAAQGKNQIRNGNFGEAVSVLRKAARLAPT-DWEAWNLLGAALDQLGRFDEARRAYRQALELAPNEPSIAN 172 (257)
T ss_pred ccCcccHHHHHHHHHHHHHhcchHHHHHHHHHHhccCCC-ChhhhhHHHHHHHHccChhHHHHHHHHHHHhccCCchhhh
Confidence 444556667777999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCChHHHHHHHHHHHcccccc
Q 011184 456 LQAAALSAMGMENEAQVALKEGTTLEAKK 484 (491)
Q Consensus 456 ~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 484 (491)
|+|..|+-.|+++.|...+..|...-+.+
T Consensus 173 Nlgms~~L~gd~~~A~~lll~a~l~~~ad 201 (257)
T COG5010 173 NLGMSLLLRGDLEDAETLLLPAYLSPAAD 201 (257)
T ss_pred hHHHHHHHcCCHHHHHHHHHHHHhCCCCc
Confidence 99999999999999999999997655544
|
|
| >TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.1e-09 Score=100.42 Aligned_cols=109 Identities=10% Similarity=0.003 Sum_probs=98.0
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhC--CCchHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS--PIWHIASY 455 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~--p~~~~a~~ 455 (491)
.+.++..+..+|..++..|++++|++.|+++++.+|. +..++.++|.++...|++++|+..++++++.. |.....++
T Consensus 61 ~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~ 139 (234)
T TIGR02521 61 DPDDYLAYLALALYYQQLGELEKAEDSFRRALTLNPN-NGDVLNNYGTFLCQQGKYEQAMQQFEQAIEDPLYPQPARSLE 139 (234)
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccccchHHHH
Confidence 4456778899999999999999999999999999998 78889999999999999999999999999864 56678899
Q ss_pred HHHHHHHHCCChHHHHHHHHHHHccccccccc
Q 011184 456 LQAAALSAMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 456 ~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
++|.++...|++++|...|+++++++|.+..+
T Consensus 140 ~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~ 171 (234)
T TIGR02521 140 NAGLCALKAGDFDKAEKYLTRALQIDPQRPES 171 (234)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCcCChHH
Confidence 99999999999999999999999999987654
|
Members of this family are designated PilF in ref (PubMed:8973346) and PilW in ref (PubMed:15612916). This outer membrane protein is required both for pilus stability and for pilus function such as adherence to human cells. Members of this family contain copies of the TPR (tetratricopeptide repeat) domain. |
| >PLN02789 farnesyltranstransferase | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.6e-10 Score=106.69 Aligned_cols=115 Identities=9% Similarity=-0.064 Sum_probs=103.0
Q ss_pred hhhhhHHHHHhHHHHHHHHHHhcCH--HHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCch
Q 011184 374 MWTDQMQETLNSKKKGDVAFRQKDL--KDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH 451 (491)
Q Consensus 374 ~~~~~~~~~~~~~~~g~~~~~~~~~--~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~ 451 (491)
.....+++...|..+|..+.+.|+. ++++++++++|+.+|. +..+|++++.++..+|++++|+++|+++|+++|.+.
T Consensus 98 ~i~~npknyqaW~~R~~~l~~l~~~~~~~el~~~~kal~~dpk-Ny~AW~~R~w~l~~l~~~~eeL~~~~~~I~~d~~N~ 176 (320)
T PLN02789 98 VAEDNPKNYQIWHHRRWLAEKLGPDAANKELEFTRKILSLDAK-NYHAWSHRQWVLRTLGGWEDELEYCHQLLEEDVRNN 176 (320)
T ss_pred HHHHCCcchHHhHHHHHHHHHcCchhhHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCch
Confidence 3345667888899999999888874 7899999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHC---CCh----HHHHHHHHHHHccccccccccc
Q 011184 452 IASYLQAAALSAM---GME----NEAQVALKEGTTLEAKKNSTAG 489 (491)
Q Consensus 452 ~a~~~~g~~~~~~---~~~----~~A~~~~~~al~l~~~~~~~~~ 489 (491)
.||+++|.++..+ |.+ ++++++.+++++++|+|..+|.
T Consensus 177 sAW~~R~~vl~~~~~l~~~~~~~e~el~y~~~aI~~~P~N~SaW~ 221 (320)
T PLN02789 177 SAWNQRYFVITRSPLLGGLEAMRDSELKYTIDAILANPRNESPWR 221 (320)
T ss_pred hHHHHHHHHHHhccccccccccHHHHHHHHHHHHHhCCCCcCHHH
Confidence 9999999999876 334 5788888999999999999985
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 491 | ||||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 1e-24 | ||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 1e-24 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 1e-22 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 1e-22 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 1e-22 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 1e-20 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 8e-20 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 2e-19 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 2e-13 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 2e-13 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 2e-13 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 2e-13 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 2e-13 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 3e-13 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 3e-13 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 2e-12 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 3e-12 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 4e-12 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 2e-11 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 2e-11 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 2e-11 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 2e-11 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 3e-11 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 3e-11 | ||
| 2zm3_A | 308 | Complex Structure Of Insulin-Like Growth Factor Rec | 4e-11 | ||
| 3o23_A | 305 | Human Unphosphorylated Igf1-R Kinase Domain In Comp | 7e-11 | ||
| 2oj9_A | 307 | Structure Of Igf-1r Kinase Domain Complexed With A | 7e-11 | ||
| 3qqu_A | 301 | Cocrystal Structure Of Unphosphorylated Igf With Py | 8e-11 | ||
| 1jqh_A | 308 | Igf-1 Receptor Kinase Domain Length = 308 | 8e-11 | ||
| 3i81_A | 315 | Crystal Structure Of Insulin-Like Growth Factor 1 R | 9e-11 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 9e-11 | ||
| 1m7n_A | 322 | Crystal Structure Of Unactivated Apo Insulin-Like G | 1e-10 | ||
| 1k3a_A | 299 | Structure Of The Insulin-Like Growth Factor 1 Recep | 1e-10 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 1e-10 | ||
| 3lw0_A | 304 | Igf-1rk In Complex With Ligand Msc1609119a-1 Length | 1e-10 | ||
| 3lvp_A | 336 | Crystal Structure Of Bisphosphorylated Igf1-R Kinas | 2e-10 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 2e-10 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 2e-10 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 2e-10 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 2e-10 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 2e-10 | ||
| 1p4o_A | 322 | Structure Of Apo Unactivated Igf-1r Kinase Domain A | 2e-10 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 2e-10 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 3e-10 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 3e-10 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 3e-10 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 3e-10 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 3e-10 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 3e-10 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 3e-10 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 3e-10 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 3e-10 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 4e-10 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 4e-10 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 4e-10 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 4e-10 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 4e-10 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 4e-10 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 4e-10 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 5e-10 | ||
| 3d94_A | 301 | Crystal Structure Of The Insulin-Like Growth Factor | 5e-10 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 7e-10 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 8e-10 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 8e-10 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 8e-10 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 9e-10 | ||
| 1rqq_A | 306 | Crystal Structure Of The Insulin Receptor Kinase In | 1e-09 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 1e-09 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 1e-09 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 1e-09 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-09 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 1e-09 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 1e-09 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 1e-09 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 1e-09 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 2e-09 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 2e-09 | ||
| 4fvp_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain ( | 2e-09 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 2e-09 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 2e-09 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 2e-09 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 2e-09 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 2e-09 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 2e-09 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 2e-09 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 2e-09 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 2e-09 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 2e-09 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 2e-09 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 2e-09 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 2e-09 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 2e-09 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 2e-09 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 2e-09 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 3e-09 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 3e-09 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 3e-09 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 3e-09 | ||
| 4fvr_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain M | 3e-09 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 3e-09 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 3e-09 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 4e-09 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 4e-09 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 5e-09 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 5e-09 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 5e-09 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 5e-09 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 6e-09 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 7e-09 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 7e-09 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 7e-09 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 7e-09 | ||
| 3ekk_A | 307 | Insulin Receptor Kinase Complexed With An Inhibitor | 7e-09 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 8e-09 | ||
| 1p14_A | 306 | Crystal Structure Of A Catalytic-Loop Mutant Of The | 8e-09 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 8e-09 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 8e-09 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 9e-09 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 9e-09 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 1e-08 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 1e-08 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 1e-08 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 1e-08 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 1e-08 | ||
| 3q6w_A | 307 | Structure Of Dually-phosphorylated Met Receptor Kin | 1e-08 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 1e-08 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 2e-08 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 2e-08 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 2e-08 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 2e-08 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 2e-08 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 2e-08 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 2e-08 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 2e-08 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 2e-08 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 3e-08 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 4e-08 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 5e-08 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 6e-08 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 6e-08 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 6e-08 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 7e-08 | ||
| 3c1x_A | 373 | Crystal Structure Of The Tyrosine Kinase Domain Of | 7e-08 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 8e-08 | ||
| 3qti_A | 314 | C-Met Kinase In Complex With Nvp-Bvu972 Length = 31 | 1e-07 | ||
| 3dkc_A | 317 | Sgx Clone 5698a65kfg1h1 Length = 317 | 1e-07 | ||
| 3cth_A | 314 | Crystal Structure Of The Tyrosine Kinase Domain Of | 1e-07 | ||
| 3dkg_A | 317 | Sgx Clone 5698a109kfg1h1 Length = 317 | 1e-07 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 1e-07 | ||
| 3a4p_A | 319 | Human C-Met Kinase Domain Complexed With 6-Benzylox | 1e-07 | ||
| 1r0p_A | 312 | Crystal Structure Of The Tyrosine Kinase Domain Of | 1e-07 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 1e-07 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 2e-07 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-07 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 2e-07 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 3e-07 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 3e-07 | ||
| 2ivs_A | 314 | Crystal Structure Of Non-Phosphorylated Ret Tyrosin | 3e-07 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 3e-07 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 4e-07 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 4e-07 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 4e-07 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 5e-07 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 5e-07 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 5e-07 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 5e-07 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 5e-07 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 5e-07 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 5e-07 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 5e-07 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 6e-07 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 6e-07 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 6e-07 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 6e-07 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 6e-07 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 6e-07 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 6e-07 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 6e-07 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 6e-07 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 7e-07 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 7e-07 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 7e-07 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 8e-07 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 8e-07 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 9e-07 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 9e-07 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 9e-07 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 9e-07 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 1e-06 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 1e-06 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 1e-06 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 1e-06 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 1e-06 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-06 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-06 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 1e-06 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 1e-06 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 1e-06 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 1e-06 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 1e-06 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 1e-06 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 1e-06 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 1e-06 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 1e-06 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 2e-06 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 2e-06 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 2e-06 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 2e-06 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 2e-06 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 2e-06 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 2e-06 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 2e-06 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 2e-06 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 2e-06 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 2e-06 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 2e-06 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 2e-06 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 2e-06 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 2e-06 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-06 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 2e-06 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-06 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 2e-06 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 3e-06 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 3e-06 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-06 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 3e-06 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 3e-06 | ||
| 2ivt_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 3e-06 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 3e-06 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-06 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 3e-06 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 3e-06 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 3e-06 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-06 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 3e-06 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 3e-06 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 3e-06 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 3e-06 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 3e-06 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 3e-06 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 3e-06 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 4e-06 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 4e-06 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 4e-06 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 4e-06 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 4e-06 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 4e-06 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 5e-06 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 5e-06 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 5e-06 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 6e-06 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 6e-06 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 6e-06 | ||
| 2ivv_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 6e-06 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 6e-06 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 6e-06 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 6e-06 | ||
| 2yjr_A | 342 | Structure Of F1174l Mutant Anaplastic Lymphoma Kina | 7e-06 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 7e-06 | ||
| 4fnw_A | 327 | Crystal Structure Of The Apo F1174l Anaplastic Lymp | 7e-06 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 7e-06 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 8e-06 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 9e-06 | ||
| 3cc6_A | 281 | Crystal Structure Of Kinase Domain Of Protein Tyros | 1e-05 | ||
| 2yfx_A | 327 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 1e-05 | ||
| 4h1j_A | 293 | Crystal Structure Of Pyk2 With The Pyrazole 13a Len | 1e-05 | ||
| 3fzo_A | 277 | Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin | 1e-05 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 1e-05 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 1e-05 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 1e-05 | ||
| 3aox_A | 344 | X-Ray Crystal Structure Of Human Anaplastic Lymphom | 1e-05 | ||
| 2xb7_A | 315 | Structure Of Human Anaplastic Lymphoma Kinase In Co | 1e-05 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 1e-05 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 1e-05 | ||
| 2xp2_A | 327 | Structure Of The Human Anaplastic Lymphoma Kinase I | 1e-05 | ||
| 2yhv_A | 342 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 1e-05 | ||
| 3lct_A | 344 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 1e-05 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 1e-05 | ||
| 4fnz_A | 327 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 1e-05 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 1e-05 | ||
| 3l9p_A | 367 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 2e-05 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 2e-05 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 2e-05 | ||
| 4dce_A | 333 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 2e-05 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 2e-05 | ||
| 2yjs_A | 342 | Structure Of C1156y Mutant Anaplastic Lymphoma Kina | 2e-05 | ||
| 4fob_A | 353 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 2e-05 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 2e-05 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 2e-05 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 3e-05 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 3e-05 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 3e-05 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 3e-05 | ||
| 4fnx_A | 327 | Crystal Structure Of The Apo R1275q Anaplastic Lymp | 3e-05 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 3e-05 | ||
| 3bz3_A | 276 | Crystal Structure Analysis Of Focal Adhesion Kinase | 4e-05 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 4e-05 | ||
| 2f2u_A | 402 | Crystal Structure Of The Rho-Kinase Kinase Domain L | 4e-05 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 4e-05 | ||
| 2etm_A | 281 | Crystal Structure Of Focal Adhesion Kinase Domain C | 4e-05 | ||
| 3pxk_A | 282 | Focal Adhesion Kinase Catalytic Domain In Complex W | 4e-05 | ||
| 2jkm_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 4e-05 | ||
| 1mp8_A | 281 | Crystal Structure Of Focal Adhesion Kinase (Fak) Le | 4e-05 | ||
| 4ebw_A | 304 | Structure Of Focal Adhesion Kinase Catalytic Domain | 4e-05 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 4e-05 | ||
| 2j0m_B | 276 | Crystal Structure A Two-Chain Complex Between The F | 4e-05 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 5e-05 | ||
| 3bbt_B | 328 | Crystal Structure Of The Erbb4 Kinase In Complex Wi | 6e-05 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 7e-05 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 7e-05 | ||
| 2r4b_A | 321 | Erbb4 Kinase Domain Complexed With A Thienopyrimidi | 7e-05 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 9e-05 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 1e-04 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 1e-04 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 1e-04 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 1e-04 | ||
| 2j0j_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 1e-04 | ||
| 4gt4_A | 308 | Structure Of Unliganded, Inactive Ror2 Kinase Domai | 1e-04 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 1e-04 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 1e-04 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 1e-04 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 1e-04 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 1e-04 | ||
| 3zzw_A | 289 | Crystal Structure Of The Kinase Domain Of Ror2 Leng | 2e-04 | ||
| 3cjf_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 2e-04 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 2e-04 | ||
| 2jkk_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 2e-04 | ||
| 2j0k_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 2e-04 | ||
| 2i0e_A | 353 | Structure Of Catalytic Domain Of Human Protein Kina | 2e-04 | ||
| 3pfq_A | 674 | Crystal Structure And Allosteric Activation Of Prot | 3e-04 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 3e-04 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 3e-04 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 3e-04 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 3e-04 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 3e-04 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 4e-04 | ||
| 1elw_A | 118 | Crystal Structure Of The Tpr1 Domain Of Hop In Comp | 4e-04 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 4e-04 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 4e-04 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 4e-04 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 5e-04 | ||
| 2wnt_A | 330 | Crystal Structure Of The Human Ribosomal Protein S6 | 5e-04 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 5e-04 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 6e-04 | ||
| 3rny_A | 346 | Crystal Structure Of Human Rsk1 C-Terminal Kinase D | 6e-04 | ||
| 2j0l_A | 276 | Crystal Structure Of A The Active Conformation Of T | 6e-04 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 6e-04 | ||
| 2xir_A | 316 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 6e-04 | ||
| 3cjg_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 6e-04 | ||
| 4agc_A | 353 | Crystal Structure Of Vegfr2 (Juxtamembrane And Kina | 7e-04 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 7e-04 | ||
| 3ewh_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 8e-04 | ||
| 3hng_A | 360 | Crystal Structure Of Vegfr1 In Complex With N-(4-ch | 8e-04 | ||
| 3u6j_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 8e-04 | ||
| 4dc2_A | 396 | Structure Of Pkc In Complex With A Substrate Peptid | 9e-04 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 9e-04 |
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308 | Back alignment and structure |
|
| >pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305 | Back alignment and structure |
|
| >pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301 | Back alignment and structure |
|
| >pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322 | Back alignment and structure |
|
| >pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304 | Back alignment and structure |
|
| >pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314 | Back alignment and structure |
|
| >pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281 | Back alignment and structure |
|
| >pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327 | Back alignment and structure |
|
| >pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293 | Back alignment and structure |
|
| >pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344 | Back alignment and structure |
|
| >pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327 | Back alignment and structure |
|
| >pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281 | Back alignment and structure |
|
| >pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282 | Back alignment and structure |
|
| >pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281 | Back alignment and structure |
|
| >pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656 | Back alignment and structure |
|
| >pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289 | Back alignment and structure |
|
| >pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656 | Back alignment and structure |
|
| >pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353 | Back alignment and structure |
|
| >pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|1ELW|A Chain A, Crystal Structure Of The Tpr1 Domain Of Hop In Complex With A Hsc70 Peptide Length = 118 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346 | Back alignment and structure |
|
| >pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316 | Back alignment and structure |
|
| >pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360 | Back alignment and structure |
|
| >pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 204 bits (522), Expect = 4e-62
Identities = 88/308 (28%), Positives = 143/308 (46%), Gaps = 27/308 (8%)
Query: 26 DVENDEMSEVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIA 85
DV +E EV L + F+L +L+ A+ F+ +NI+ G VYKG+L + +A
Sbjct: 3 DVPAEEDPEVH-LGQLKRFSLRELQVASDNFSNKNIL---GRGGFGKVYKGRLADGTLVA 58
Query: 86 VKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHL 144
VKR QF E + + L L G C ERLLV YM N ++A L
Sbjct: 59 VKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL 118
Query: 145 F--HWETHPMKWAMRLRVVLHLAQALEY--CTSKGRALYHDLNAYRILFDEDGNPRLSTF 200
P+ W R R+ L A+ L Y + ++ D+ A IL DE+ + F
Sbjct: 119 RERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 178
Query: 201 GLMKNSRDGKSY-STNLAFT----PPEYLRTGRVTPESVIYSFGTLLLDLLSGK-----H 250
GL K ++ +T + T PEYL TG+ + ++ ++ +G +LL+L++G+
Sbjct: 179 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLA 238
Query: 251 IPP--------SHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 302
L++++ L+ L D L+G + D++ +L+++A C Q P ERP
Sbjct: 239 RLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPK 298
Query: 303 PKSLVTAL 310
+V L
Sbjct: 299 MSEVVRML 306
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 203 bits (518), Expect = 9e-62
Identities = 85/317 (26%), Positives = 142/317 (44%), Gaps = 42/317 (13%)
Query: 28 ENDEMSEVDGLPSFREFTLEQLKNATSGFAVENIVSEH---GEKAPNVVYKGKLENQRRI 84
EN + D F F+ +LKN T+ F I GE VVYKG + N +
Sbjct: 1 ENKSLEVSDT--RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-V 57
Query: 85 AVKRFNRMAWPDP----RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL 140
AVK+ M +QF +E + + + ++ L LLG +GD+ LV YMPN +L
Sbjct: 58 AVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 117
Query: 141 AKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR------ILFDEDG 193
L + T P+ W MR ++ A + + L+ + + +R IL DE
Sbjct: 118 LDRLSCLDGTPPLSWHMRCKIAQGAANGINF-------LHENHHIHRDIKSANILLDEAF 170
Query: 194 NPRLSTFGLMK-NSRDGKSY-STNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLS 247
++S FGL + + + ++ ++ + T PE L G +TP+S IYSFG +LL++++
Sbjct: 171 TAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIIT 229
Query: 248 GK-----HIPPSHALD-----LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 297
G H P LD ++ ++ D + + +AS+CL +
Sbjct: 230 GLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKK 288
Query: 298 RERPNPKSLVTALSPLQ 314
+RP+ K + L +
Sbjct: 289 NKRPDIKKVQQLLQEMT 305
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 195 bits (497), Expect = 2e-58
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 23/288 (7%)
Query: 42 REFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFL 101
L L+ AT+ F + ++ G VYKG L + ++A+KR + +F
Sbjct: 27 YRVPLVDLEEATNNFDHKFLI---GHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFE 83
Query: 102 EEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLF--HWETHPMKWAMRLR 159
E ++ R+ L +L+G C E +E +L+ +YM N L +HL+ T M W RL
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLE 143
Query: 160 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSY-STNLA 217
+ + A+ L Y ++ D+ + IL DE+ P+++ FG+ K + +++ ST +
Sbjct: 144 ICIGAARGLHY-LHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVK 202
Query: 218 FTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSH-------ALDLIRD 262
T PEY GR+T +S +YSFG +L ++L + P A++ +
Sbjct: 203 GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN 262
Query: 263 RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 310
L+ + D L + + + A +CL +RP+ ++ L
Sbjct: 263 GQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 109 bits (273), Expect = 1e-26
Identities = 51/325 (15%), Positives = 104/325 (32%), Gaps = 57/325 (17%)
Query: 40 SFREFTLEQLKNATSGFAVENIVSE--HGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDP 97
S + E L + + + + G V+K +L N+ +AVK F D
Sbjct: 10 SGVDLGTENLYFQSMPLQLLEVKARGRFGC-----VWKAQLLNEY-VAVKIFP---IQDK 60
Query: 98 RQFLEEA--RSVGQLRNNRLTNLLGCCCEGD----ERLLVAEYMPNETLAKHLFHWETHP 151
+ + E S+ +++ + +G G + L+ + +L+ L +
Sbjct: 61 QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA---NV 117
Query: 152 MKWAMRLRVVLHLAQALEYCTSKGRALY--------H-DLNAYRILFDEDGNPRLSTFGL 202
+ W + +A+ L Y L H D+ + +L + ++ FGL
Sbjct: 118 VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL 177
Query: 203 MKNSRDGKSYSTNLAFT------PPEYLRTGRVTPESV-----IYSFGTLLLDLLSGK-- 249
GKS PE L +Y+ G +L +L S
Sbjct: 178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTA 237
Query: 250 --------------HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT-ELVRLASRCLQ 294
I +L+ +++ + L + G L C
Sbjct: 238 ADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWD 297
Query: 295 YEPRERPNPKSLVTALSPLQKETEV 319
++ R + + ++ +Q+ T +
Sbjct: 298 HDAEARLSAGCVGERITQMQRLTNI 322
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 7e-25
Identities = 46/258 (17%), Positives = 92/258 (35%), Gaps = 24/258 (9%)
Query: 72 VVYKGKLENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 129
++KG+ + I VK W R F EE + + + +LG C
Sbjct: 25 ELWKGRWQGND-IVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83
Query: 130 L--VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYR 186
+ +MP +L L + + ++ L +A+ + + + + LN+
Sbjct: 84 PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRS 143
Query: 187 ILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESV---IYSFGTLLL 243
++ DED R+S + K S A+ PE L+ ++SF LL
Sbjct: 144 VMIDEDMTARISMADV-KFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLW 202
Query: 244 DLLSGK----HIPPSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPR 298
+L++ + + + L+ + + +L C+ +P
Sbjct: 203 ELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISP---------HVSKLMKICMNEDPA 253
Query: 299 ERPNPKSLVTALSPLQKE 316
+RP +V L +Q +
Sbjct: 254 KRPKFDMIVPILEKMQDK 271
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 1e-24
Identities = 52/264 (19%), Positives = 109/264 (41%), Gaps = 23/264 (8%)
Query: 72 VVYKGKLENQRRIAVKRFNRMAWPDP--RQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 129
V++ + +AVK + +FL E + +LR+ + +G +
Sbjct: 52 TVHRAEWHGSD-VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110
Query: 130 LVAEYMPNETLAKHLFHWETH-PMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRI 187
+V EY+ +L + L + RL + +A+ + Y ++ + H +L + +
Sbjct: 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNL 170
Query: 188 LFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLL 243
L D+ ++ FGL + S + A TP PE LR +S +YSFG +L
Sbjct: 171 LVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILW 230
Query: 244 DLLSGK----HIPPSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPR 298
+L + + ++ P+ + + + ++ + + ++ + C EP
Sbjct: 231 ELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNP---------QVAAIIEGCWTNEPW 281
Query: 299 ERPNPKSLVTALSPLQKETEVPSH 322
+RP+ +++ L PL K P +
Sbjct: 282 KRPSFATIMDLLRPLIKSAVPPPN 305
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 99.7 bits (249), Expect = 1e-23
Identities = 57/261 (21%), Positives = 105/261 (40%), Gaps = 28/261 (10%)
Query: 73 VYKGKLENQRRIAVKRFN--RMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL- 129
VYKGK +AVK N + F E + + R+ + +G +L
Sbjct: 40 VYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA--PQLA 95
Query: 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRIL 188
+V ++ +L HL H + + + A+ ++Y +K + H DL + I
Sbjct: 96 IVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGMDYLHAKS--IIHRDLKSNNIF 152
Query: 189 FDEDGNPRLSTFGL--MKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESV---IYSFG 239
ED ++ FGL K+ G L+ + PE +R P S +Y+FG
Sbjct: 153 LHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 212
Query: 240 TLLLDLLSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 295
+L +L++G+ +I + + R S + + + RL + CL+
Sbjct: 213 IVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLS----KVRSNCPKRMKRLMAECLKK 268
Query: 296 EPRERPNPKSLVTALSPLQKE 316
+ ERP+ ++ + L +E
Sbjct: 269 KRDERPSFPRILAEIEELARE 289
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 93.9 bits (234), Expect = 1e-21
Identities = 51/259 (19%), Positives = 105/259 (40%), Gaps = 31/259 (11%)
Query: 72 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131
VV K K + +A+K+ + + F+ E R + ++ + + L G C + LV
Sbjct: 23 VVCKAKWRAKD-VAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLV 77
Query: 132 AEYMPNETLAKHLFHWETHP-MKWAMRLRVVLHLAQALEYC-TSKGRALYH-DLNAYRIL 188
EY +L L E P A + L +Q + Y + + +AL H DL +L
Sbjct: 78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLL 137
Query: 189 FDEDGN-PRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLL 243
G ++ FG + D +++ TN + PE + + ++S+G +L
Sbjct: 138 LVAGGTVLKICDFGT---ACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILW 194
Query: 244 DLLSGK------HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 297
++++ + P + + + L + + + L +RC +P
Sbjct: 195 EVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPK---------PIESLMTRCWSKDP 245
Query: 298 RERPNPKSLVTALSPLQKE 316
+RP+ + +V ++ L +
Sbjct: 246 SQRPSMEEIVKIMTHLMRY 264
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 93.8 bits (233), Expect = 3e-21
Identities = 58/343 (16%), Positives = 103/343 (30%), Gaps = 68/343 (19%)
Query: 43 EFTLEQLKNATSGFAVENIVSE--HGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQF 100
E + + ++ +G VYKG L+ + +AVK F+ + + + F
Sbjct: 2 EAAASEPSLDLDNLKLLELIGRGRYGA-----VYKGSLDERP-VAVKVFS---FANRQNF 52
Query: 101 LEEAR--SVGQLRNNRLTNLLGCCCEGD-----ERLLVAEYMPNETLAKHLFHWETHPMK 153
+ E V + ++ + + E LLV EY PN +L K+L H
Sbjct: 53 INEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSL---HTSD 109
Query: 154 WAMRLRVVLHLAQALEY-------CTSKGRALYH-DLNAYRILFDEDGNPRLSTFGL--- 202
W R+ + + L Y A+ H DLN+ +L DG +S FGL
Sbjct: 110 WVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR 169
Query: 203 -----MKNSRDGKSYSTNLAFTP----PEYLR-------TGRVTPESVIYSFGTLLLDLL 246
+ + + + + T PE L + +Y+ G + ++
Sbjct: 170 LTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
Query: 247 SGKHI-----------PPSHALDLIRDRNLQMLTDSCLEGQ-------FTDDDGT--ELV 286
M E Q + ++ L
Sbjct: 230 MRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLK 289
Query: 287 RLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPH 329
C + R + ++ L E V H
Sbjct: 290 ETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKSVSPTAHH 332
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 92.4 bits (230), Expect = 5e-21
Identities = 47/272 (17%), Positives = 88/272 (32%), Gaps = 38/272 (13%)
Query: 73 VYKGKLENQRR-IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131
K + +K R R FL+E + + L + + +G + +
Sbjct: 26 AIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI 85
Query: 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFD 190
EY+ TL + W+ R+ +A + Y S + H DLN++ L
Sbjct: 86 TEYIKGGTLRGII-KSMDSQYPWSQRVSFAKDIASGMAYLHSMN--IIHRDLNSHNCLVR 142
Query: 191 EDGNPRLSTFGL--------------MKNSRDGKSYSTNLAFTP----PEYLRTGRVTPE 232
E+ N ++ FGL + + + P PE + +
Sbjct: 143 ENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEK 202
Query: 233 SVIYSFGTLLLDLLSGKHIPP-----SHALDLIRDRNLQM-LTDSCLEGQFTDDDGTELV 286
++SFG +L +++ + P + L L +C
Sbjct: 203 VDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPP---------SFF 253
Query: 287 RLASRCLQYEPRERPNPKSLVTALSPLQKETE 318
+ RC +P +RP+ L L L+
Sbjct: 254 PITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 90.4 bits (225), Expect = 1e-20
Identities = 49/263 (18%), Positives = 95/263 (36%), Gaps = 40/263 (15%)
Query: 72 VVYKGKLENQRRIAVKRFNRMAWPDP----RQFLEEARSVGQLRNNRLTNLLGCCCEGDE 127
VY+ +AVK D +EA+ L++ + L G C +
Sbjct: 22 KVYRAFWIGDE-VAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPN 80
Query: 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA--LYHDLNAY 185
LV E+ L + L + + + + +A+ + Y + ++ DL +
Sbjct: 81 LCLVMEFARGGPLNRVL---SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSS 137
Query: 186 RILFDEDGNPRLST--------FGLMKNSRD-GKSYSTNLAFTP----PEYLRTGRVTPE 232
IL + + FGL +R+ ++ + A PE +R +
Sbjct: 138 NILILQKVENGDLSNKILKITDFGL---AREWHRTTKMSAAGAYAWMAPEVIRASMFSKG 194
Query: 233 SVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVR 287
S ++S+G LL +LL+G+ I + L + + +C E +
Sbjct: 195 SDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPE---------PFAK 245
Query: 288 LASRCLQYEPRERPNPKSLVTAL 310
L C +P RP+ +++ L
Sbjct: 246 LMEDCWNPDPHSRPSFTNILDQL 268
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 2e-20
Identities = 56/269 (20%), Positives = 108/269 (40%), Gaps = 42/269 (15%)
Query: 72 VVYKGK-LENQRRIAVKRFNRMAWPDP-------RQFLEEARSVGQLRNNRLTNLLGCCC 123
+V+KG+ ++++ +A+K ++F E + L + + L G
Sbjct: 34 LVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH 93
Query: 124 EGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DL 182
+V E++P L L + HP+KW+++LR++L +A +EY ++ + H DL
Sbjct: 94 NPP--RMVMEFVPCGDLYHRL-LDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDL 150
Query: 183 NAYRILFDEDGNPRLST-----FGLMKNSRDGKSYSTNLAFTP----PEYL--RTGRVTP 231
+ I FGL S+ + L PE + T
Sbjct: 151 RSPNIFLQSLDENAPVCAKVADFGL---SQQSVHSVSGLLGNFQWMAPETIGAEEESYTE 207
Query: 232 ESVIYSFGTLLLDLLSGK----HIPPSHA--LDLIRDRNLQM-LTDSCLEGQFTDDDGTE 284
++ YSF +L +L+G+ +++IR+ L+ + + C
Sbjct: 208 KADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPP---------R 258
Query: 285 LVRLASRCLQYEPRERPNPKSLVTALSPL 313
L + C +P++RP+ +V LS L
Sbjct: 259 LRNVIELCWSGDPKKRPHFSYIVKELSEL 287
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 3e-20
Identities = 46/279 (16%), Positives = 90/279 (32%), Gaps = 45/279 (16%)
Query: 72 VVYKGKLENQRRIAVKRFNRMAWPDP-----RQFLEEARSVGQLRNNRLTNLLGCCCEGD 126
VY G+ + +A++ + + F E + Q R+ + +G C
Sbjct: 48 QVYHGRWHGE--VAIRLID---IERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP 102
Query: 127 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAY 185
++ TL + + ++ + + + Y +KG + H DL +
Sbjct: 103 HLAIITSLCKGRTLYSVV-RDAKIVLDVNKTRQIAQEIVKGMGYLHAKG--ILHKDLKSK 159
Query: 186 RILFDEDGNPRLSTFGL--MKNSRDGKSYSTNLAFTP-------PEYLRTGRVTPESV-- 234
+ +D +G ++ FGL + L PE +R E
Sbjct: 160 NVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKL 218
Query: 235 -------IYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 283
+++ GT+ +L + + P + + L+ G
Sbjct: 219 PFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQI--------GMGK 270
Query: 284 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSH 322
E+ + C +E ERP L+ L L K SH
Sbjct: 271 EISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSH 309
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 86.7 bits (215), Expect = 2e-18
Identities = 67/258 (25%), Positives = 105/258 (40%), Gaps = 26/258 (10%)
Query: 73 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132
V+ G R+A+K P FL+EA+ + +LR+ +L L E + +V
Sbjct: 200 VWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257
Query: 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDE 191
EYM +L L ++ + + +A + Y H DL A IL E
Sbjct: 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGE 315
Query: 192 DGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDLL 246
+ +++ FGL + D + + A +T PE GR T +S ++SFG LL +L
Sbjct: 316 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 375
Query: 247 SGKHIP-----PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
+ +P LD + +R +M C E L L +C + EP ER
Sbjct: 376 TKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPE---------SLHDLMCQCWRKEPEER 425
Query: 301 PNPKSLVTALSPLQKETE 318
P + L L TE
Sbjct: 426 PTFEYLQAFLEDYFTSTE 443
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 86.4 bits (214), Expect = 3e-18
Identities = 56/260 (21%), Positives = 112/260 (43%), Gaps = 26/260 (10%)
Query: 73 VYKGKLENQR-RIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131
VY+G + +AVK + + +FL+EA + ++++ L LLG C ++
Sbjct: 236 VYEGVWKKYSLTVAVKT-LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294
Query: 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFD 190
E+M L +L + + L + ++ A+EY K H +L A L
Sbjct: 295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVG 352
Query: 191 EDGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDL 245
E+ +++ FGL + + A +T PE L + + +S +++FG LL ++
Sbjct: 353 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412
Query: 246 LSGKHIP-----PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRE 299
+ P S +L+ +++ +M + C E ++ L C Q+ P +
Sbjct: 413 ATYGMSPYPGIDLSQVYELL-EKDYRMERPEGCPE---------KVYELMRACWQWNPSD 462
Query: 300 RPNPKSLVTALSPLQKETEV 319
RP+ + A + +E+ +
Sbjct: 463 RPSFAEIHQAFETMFQESSI 482
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 85.5 bits (212), Expect = 4e-18
Identities = 56/258 (21%), Positives = 104/258 (40%), Gaps = 26/258 (10%)
Query: 73 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132
V+ ++AVK + FL EA + L++++L L + + ++
Sbjct: 204 VWMATYNKHTKVAVKT-MKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 261
Query: 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDE 191
E+M +L L E + +A+ + + + H DL A IL
Sbjct: 262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSA 319
Query: 192 DGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDLL 246
+++ FGL + D + + A +T PE + G T +S ++SFG LL++++
Sbjct: 320 SLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIV 379
Query: 247 SGKHIP-----PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
+ IP + + +R +M ++C E EL + RC + P ER
Sbjct: 380 TYGRIPYPGMSNPEVIRAL-ERGYRMPRPENCPE---------ELYNIMMRCWKNRPEER 429
Query: 301 PNPKSLVTALSPLQKETE 318
P + + + L TE
Sbjct: 430 PTFEYIQSVLDDFYTATE 447
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 85.7 bits (212), Expect = 5e-18
Identities = 67/258 (25%), Positives = 105/258 (40%), Gaps = 26/258 (10%)
Query: 73 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132
V+ G R+A+K P FL+EA+ + +LR+ +L L E + +V
Sbjct: 283 VWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 340
Query: 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDE 191
EYM +L L ++ + + +A + Y H DL A IL E
Sbjct: 341 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGE 398
Query: 192 DGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDLL 246
+ +++ FGL + D + + A +T PE GR T +S ++SFG LL +L
Sbjct: 399 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 458
Query: 247 SGKHIP-----PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
+ +P LD + +R +M C E L L +C + EP ER
Sbjct: 459 TKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPE---------SLHDLMCQCWRKEPEER 508
Query: 301 PNPKSLVTALSPLQKETE 318
P + L L TE
Sbjct: 509 PTFEYLQAFLEDYFTSTE 526
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 81.9 bits (203), Expect = 1e-17
Identities = 51/257 (19%), Positives = 110/257 (42%), Gaps = 26/257 (10%)
Query: 72 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131
VV GK + Q +AVK + +F +EA+++ +L + +L G C + +V
Sbjct: 23 VVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIV 81
Query: 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFD 190
EY+ N L +L ++ + L + + + + + S H DL A L D
Sbjct: 82 TEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFLESHQ--FIHRDLAARNCLVD 138
Query: 191 EDGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDL 245
D ++S FG+ + D + S+ ++ PE + + +S +++FG L+ ++
Sbjct: 139 RDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEV 198
Query: 246 LSGKHIP-----PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRE 299
S +P S + + + ++ + + ++ C P +
Sbjct: 199 FSLGKMPYDLYTNSEVVLKV-SQGHRLYRPHLASD---------TIYQIMYSCWHELPEK 248
Query: 300 RPNPKSLVTALSPLQKE 316
RP + L++++ PL+++
Sbjct: 249 RPTFQQLLSSIEPLREK 265
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 1e-17
Identities = 65/256 (25%), Positives = 103/256 (40%), Gaps = 30/256 (11%)
Query: 73 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL-LV 131
V G + +AVK A + FL EA + QLR++ L LLG E L +V
Sbjct: 209 VMLGDYRGNK-VAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265
Query: 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFD 190
EYM +L +L + L+ L + +A+EY H DL A +L
Sbjct: 266 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVS 323
Query: 191 EDGNPRLSTFGLMKNSRDGKSYSTNLAF----TPPEYLRTGRVTPESVIYSFGTLLLDLL 246
ED ++S FGL +++ S T PE LR + + +S ++SFG LL ++
Sbjct: 324 EDNVAKVSDFGL---TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 380
Query: 247 S-GKH----IPPSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
S G+ IP + + ++ +M D C + + C + R
Sbjct: 381 SFGRVPYPRIPLKDVVPRV-EKGYKMDAPDGCPP---------AVYDVMKNCWHLDAATR 430
Query: 301 PNPKSLVTALSPLQKE 316
P L L ++
Sbjct: 431 PTFLQLREQLEHIRTH 446
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 81.9 bits (203), Expect = 1e-17
Identities = 56/260 (21%), Positives = 106/260 (40%), Gaps = 24/260 (9%)
Query: 72 VVYKGKLENQR-RIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130
VY+G + +AVK + +FL+EA + ++++ L LLG C +
Sbjct: 28 EVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILF 189
+ E+M L +L + + L + ++ A+EY K H DL A L
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLV 144
Query: 190 DEDGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLD 244
E+ +++ FGL + + A +T PE L + + +S +++FG LL +
Sbjct: 145 GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
Query: 245 LLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 299
+ + P S +L+ + C E ++ L C Q+ P +
Sbjct: 205 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPE---------KVYELMRACWQWNPSD 255
Query: 300 RPNPKSLVTALSPLQKETEV 319
RP+ + A + +E+ +
Sbjct: 256 RPSFAEIHQAFETMFQESSI 275
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 81.5 bits (202), Expect = 2e-17
Identities = 65/257 (25%), Positives = 104/257 (40%), Gaps = 30/257 (11%)
Query: 72 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL-L 130
V G + +AVK A + FL EA + QLR++ L LLG E L +
Sbjct: 36 DVMLGDYRGNK-VAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 92
Query: 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILF 189
V EYM +L +L + L+ L + +A+EY H DL A +L
Sbjct: 93 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLV 150
Query: 190 DEDGNPRLSTFGLMKNSRDGKSYSTNLAF----TPPEYLRTGRVTPESVIYSFGTLLLDL 245
ED ++S FGL +++ S T PE LR + + +S ++SFG LL ++
Sbjct: 151 SEDNVAKVSDFGL---TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 207
Query: 246 LS-GKH----IPPSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRE 299
S G+ IP + + ++ +M D C + + C +
Sbjct: 208 YSFGRVPYPRIPLKDVVPRV-EKGYKMDAPDGCPP---------AVYEVMKNCWHLDAAM 257
Query: 300 RPNPKSLVTALSPLQKE 316
RP+ L L ++
Sbjct: 258 RPSFLQLREQLEHIKTH 274
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 2e-17
Identities = 63/259 (24%), Positives = 107/259 (41%), Gaps = 28/259 (10%)
Query: 73 VYKGKLENQR-RIAVKRFNR-MAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130
V+ G+L +AVK + +FL+EAR + Q + + L+G C + +
Sbjct: 130 VFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189
Query: 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILF 189
V E + L E ++ L++V A +EY SK H DL A L
Sbjct: 190 VMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLESKC--CIHRDLAARNCLV 246
Query: 190 DEDGNPRLSTFGLMKNSRDGKSYSTNLAF------TPPEYLRTGRVTPESVIYSFGTLLL 243
E ++S FG+ + DG ++ T PE L GR + ES ++SFG LL
Sbjct: 247 TEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLW 306
Query: 244 DLLSGKHIP-----PSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEP 297
+ S P + + ++ ++ + C + + RL +C YEP
Sbjct: 307 ETFSLGASPYPNLSNQQTREFV-EKGGRLPCPELCPD---------AVFRLMEQCWAYEP 356
Query: 298 RERPNPKSLVTALSPLQKE 316
+RP+ ++ L ++K
Sbjct: 357 GQRPSFSTIYQELQSIRKR 375
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 80.7 bits (200), Expect = 3e-17
Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 26/258 (10%)
Query: 73 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132
V+ G ++AVK + + P FL EA + QL++ RL L + + ++
Sbjct: 29 VWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86
Query: 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDE 191
EYM N +L L + L + +A+ + + + H DL A IL +
Sbjct: 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAANILVSD 144
Query: 192 DGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDLL 246
+ +++ FGL + D + + A +T PE + G T +S ++SFG LL +++
Sbjct: 145 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
Query: 247 SGKHIP-----PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
+ IP + + +R +M+ D+C E EL +L C + P +R
Sbjct: 205 THGRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPE---------ELYQLMRLCWKERPEDR 254
Query: 301 PNPKSLVTALSPLQKETE 318
P L + L TE
Sbjct: 255 PTFDYLRSVLEDFFTATE 272
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 5e-16
Identities = 55/256 (21%), Positives = 105/256 (41%), Gaps = 26/256 (10%)
Query: 72 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131
+V+ G N+ ++A+K A F+EEA + +L + +L L G C E LV
Sbjct: 23 LVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 81
Query: 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFD 190
E+M + L+ +L + L + L + + + Y + H DL A L
Sbjct: 82 TEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVG 138
Query: 191 EDGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDL 245
E+ ++S FG+ + D + S+ + PE R + +S ++SFG L+ ++
Sbjct: 139 ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 198
Query: 246 LSGKHIP-P----SHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRE 299
S IP S ++ I ++ + ++ + C + P +
Sbjct: 199 FSEGKIPYENRSNSEVVEDI-STGFRLYKPRLAST---------HVYQIMNHCWRERPED 248
Query: 300 RPNPKSLVTALSPLQK 315
RP L+ L+ + +
Sbjct: 249 RPAFSRLLRQLAEIAE 264
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 5e-16
Identities = 63/257 (24%), Positives = 112/257 (43%), Gaps = 26/257 (10%)
Query: 72 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131
VV GK Q +A+K + +F+EEA+ + L + +L L G C + ++
Sbjct: 39 VVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97
Query: 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFD 190
EYM N L +L H + L + + +A+EY SK H DL A L +
Sbjct: 98 TEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQ--FLHRDLAARNCLVN 154
Query: 191 EDGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDL 245
+ G ++S FGL + D + S+ + ++PPE L + + +S I++FG L+ ++
Sbjct: 155 DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 214
Query: 246 LSGKHIP-P----SHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRE 299
S +P S + I + L++ E ++ + C + E
Sbjct: 215 YSLGKMPYERFTNSETAEHI-AQGLRLYRPHLASE---------KVYTIMYSCWHEKADE 264
Query: 300 RPNPKSLVTALSPLQKE 316
RP K L++ + + E
Sbjct: 265 RPTFKILLSNILDVMDE 281
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 8e-16
Identities = 60/280 (21%), Positives = 103/280 (36%), Gaps = 37/280 (13%)
Query: 73 VYKGKL--------ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 124
++KG ++ + +K ++ F E A + +L + L G C
Sbjct: 24 IFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC 83
Query: 125 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLN 183
GDE +LV E++ +L +L + + +L V LA A+ + L H ++
Sbjct: 84 GDENILVQEFVKFGSLDTYL-KKNKNCINILWKLEVAKQLAAAMHFLEENT--LIHGNVC 140
Query: 184 AYRILFDEDGNPR--------LSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV-TPESV 234
A IL + + + LS G+ + + PPE + + +
Sbjct: 141 AKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATD 200
Query: 235 IYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 289
+SFGT L ++ SG P L DR Q EL L
Sbjct: 201 KWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDR-----------HQLPAPKAAELANLI 249
Query: 290 SRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPH 329
+ C+ YEP RP+ ++++ L+ L VP H
Sbjct: 250 NNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPRGSHHHHHH 289
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 76.2 bits (188), Expect = 2e-15
Identities = 58/266 (21%), Positives = 103/266 (38%), Gaps = 32/266 (12%)
Query: 73 VYKGKL----ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 127
VY G+ +N+ + A+K +R+ FL E + L + + L+G +
Sbjct: 37 VYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG 96
Query: 128 RLL-VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAY 185
+ YM + L + + + L +A+ +EY + H DL A
Sbjct: 97 LPHVLLPYMCHGDLLQFI-RSPQRNPTVKDLISFGLQVARGMEYLAEQK--FVHRDLAAR 153
Query: 186 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF--------TPPEYLRTGRVTPESVIYS 237
+ DE +++ FGL ++ D + YS T E L+T R T +S ++S
Sbjct: 154 NCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWS 213
Query: 238 FGTLLLDLLS-GK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 292
FG LL +LL+ G HI P + + C + L ++ +C
Sbjct: 214 FGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPD---------SLYQVMQQC 264
Query: 293 LQYEPRERPNPKSLVTALSPLQKETE 318
+ +P RP + LV + +
Sbjct: 265 WEADPAVRPTFRVLVGEVEQIVSALL 290
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 3e-15
Identities = 62/266 (23%), Positives = 106/266 (39%), Gaps = 32/266 (12%)
Query: 73 VYKGKL----ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 127
VY G L + AVK NR+ + QFL E + + + +LLG C +
Sbjct: 41 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 100
Query: 128 -RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAY 185
L+V YM + L + ETH + L +A+ ++Y SK H DL A
Sbjct: 101 SPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAAR 157
Query: 186 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF--------TPPEYLRTGRVTPESVIYS 237
+ DE +++ FGL ++ D + YS + E L+T + T +S ++S
Sbjct: 158 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 217
Query: 238 FGTLLLDLLS-GK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 292
FG LL +L++ G + + + + C + L + +C
Sbjct: 218 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------PLYEVMLKC 268
Query: 293 LQYEPRERPNPKSLVTALSPLQKETE 318
+ RP+ LV+ +S +
Sbjct: 269 WHPKAEMRPSFSELVSRISAIFSTFI 294
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 4e-15
Identities = 53/280 (18%), Positives = 104/280 (37%), Gaps = 45/280 (16%)
Query: 73 VYKGKL----ENQRRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 126
V + +L + ++AVK + + +A D +FL EA + + + + L+G
Sbjct: 39 VREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98
Query: 127 ER------LLVAEYMPN----ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGR 176
+ +++ +M + L + +R ++ +A +EY +S+
Sbjct: 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN- 157
Query: 177 ALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSY---STNLAF----TPPEYLRT 226
H DL A + ED ++ FGL SR Y E L
Sbjct: 158 -FIHRDLAARNCMLAEDMTVCVADFGL---SRKIYSGDYYRQGCASKLPVKWLALESLAD 213
Query: 227 GRVTPESVIYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 281
T S +++FG + ++++ G+ I + + + N C+E
Sbjct: 214 NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECME------- 266
Query: 282 GTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPS 321
E+ L +C +P++RP+ L L + V S
Sbjct: 267 --EVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLS 304
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 74.6 bits (184), Expect = 6e-15
Identities = 55/271 (20%), Positives = 104/271 (38%), Gaps = 38/271 (14%)
Query: 73 VYKGKLEN------QRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG 125
VY+G + + R+A+K N A + +FL EA + + + + LLG +G
Sbjct: 41 VYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100
Query: 126 DERLLVAEYMPN----ETLAKHLFHWETHPMKWAMRLRVVLH----LAQALEYCTSKGRA 177
L++ E M L +P+ L ++ +A + Y +
Sbjct: 101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-- 158
Query: 178 LYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF----TPPEYLRTGRVT 230
H DL A + ED ++ FG+ ++ + Y PE L+ G T
Sbjct: 159 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 218
Query: 231 PESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 285
S ++SFG +L ++ + + + L + + L D+C + L
Sbjct: 219 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPD---------ML 269
Query: 286 VRLASRCLQYEPRERPNPKSLVTALSPLQKE 316
L C QY P+ RP+ +++++ +
Sbjct: 270 FELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 75.7 bits (186), Expect = 1e-14
Identities = 54/263 (20%), Positives = 96/263 (36%), Gaps = 29/263 (11%)
Query: 73 VYKGKL----ENQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGDE 127
V++G +A+K R+ FL+EA ++ Q + + L+G +
Sbjct: 406 VHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENP 464
Query: 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYR 186
++ E L L + A + L+ AL Y SK H D+ A
Sbjct: 465 VWIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTALAYLESKR--FVHRDIAARN 521
Query: 187 ILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTL 241
+L + +L FGL + D Y + + PE + R T S ++ FG
Sbjct: 522 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 581
Query: 242 LLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 296
+ ++L P + + I + + +C L L ++C Y+
Sbjct: 582 MWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP---------TLYSLMTKCWAYD 632
Query: 297 PRERPNPKSLVTALSPLQKETEV 319
P RP L LS + +E ++
Sbjct: 633 PSRRPRFTELKAQLSTILEEEKL 655
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 74.0 bits (182), Expect = 1e-14
Identities = 50/292 (17%), Positives = 99/292 (33%), Gaps = 54/292 (18%)
Query: 73 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL---GCCCEGDER- 128
V+ GK ++ +AVK F + + E + Q R N+L +G
Sbjct: 53 VWMGKWRGEK-VAVKVFF---TTEEASWFRE-TEIYQTVLMRHENILGFIAADIKGTGSW 107
Query: 129 ---LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEY------CTSKGRALY 179
L+ +Y N +L +L ++ + L++ L + T A+
Sbjct: 108 TQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIA 164
Query: 180 H-DLNAYRILFDEDGNPRLSTFGL----MKNSRDGKSYSTNLAFTP----PEYLRTGRVT 230
H DL + IL ++G ++ GL + ++ + T PE L +
Sbjct: 165 HRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLD-ESLN 223
Query: 231 PESV-------IYSFGTLLLDLLSGKHI--------PPSHALDLIRDRNLQMLTDSCLEG 275
+YSFG +L ++ P H L M C++
Sbjct: 224 RNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKK 283
Query: 276 Q--------FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 319
+D+ ++ +L + C + P R + L+ + + ++
Sbjct: 284 LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDI 335
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 Length = 118 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 2e-14
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 379 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT---VYARRSLCYLMSDMPQD 435
M++ K+KG+ A ++ DA++CY++ I + P +Y+ RS Y Q
Sbjct: 1 MEQVNELKEKGNKALSVGNIDDALQCYSEAIK----LDPHNHVLYSNRSAAYAKKGDYQK 56
Query: 436 ALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488
A D + + P W +AAAL + EA+ +EG E N
Sbjct: 57 AYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHE-ANNPQL 108
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 72.9 bits (179), Expect = 4e-14
Identities = 61/264 (23%), Positives = 105/264 (39%), Gaps = 38/264 (14%)
Query: 73 VYKGKL----ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 127
VY G L + AVK NR+ + QFL E + + + +LLG C +
Sbjct: 105 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 164
Query: 128 -RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAY 185
L+V YM + L + ETH + L +A+ +++ SK H DL A
Sbjct: 165 SPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAAR 221
Query: 186 RILFDEDGNPRLSTFGLMKNSRD------GKSYSTNLAF-----TPPEYLRTGRVTPESV 234
+ DE +++ FGL +RD ++ A E L+T + T +S
Sbjct: 222 NCMLDEKFTVKVADFGL---ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 278
Query: 235 IYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 289
++SFG LL +L++ G + + + + C + L +
Sbjct: 279 VWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------PLYEVM 329
Query: 290 SRCLQYEPRERPNPKSLVTALSPL 313
+C + RP+ LV+ +S +
Sbjct: 330 LKCWHPKAEMRPSFSELVSRISAI 353
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} Length = 164 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 5e-14
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Query: 386 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 445
K +G+ A +K+ AI+ YTQ + +P + R+ Y S + A DA A +
Sbjct: 15 KSEGNAAMARKEYSKAIDLYTQALSIAPA-NPIYLSNRAAAYSASGQHEKAAEDAELATV 73
Query: 446 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 491
+ P + A A M A+ A ++G E S A ++
Sbjct: 74 VDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKR 119
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 5e-14
Identities = 57/274 (20%), Positives = 97/274 (35%), Gaps = 35/274 (12%)
Query: 73 VYKGKLEN-----QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 126
V + +AVK A P + +E + L + + GCC +
Sbjct: 47 VSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG 106
Query: 127 ER--LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLN 183
LV EY+P +L +L H + A L + + + Y ++ H DL
Sbjct: 107 AASLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHAQH--YIHRDLA 161
Query: 184 AYRILFDEDGNPRLSTFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVTPESVIY 236
A +L D D ++ FGL K +G Y + PE L+ + S ++
Sbjct: 162 ARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVW 221
Query: 237 SFGTLLLDLLS--GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG----------TE 284
SFG L +LL+ P + +T L + G E
Sbjct: 222 SFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL--LERGERLPRPDKCPAE 279
Query: 285 LVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 318
+ L C + E RP ++L+ L + ++ +
Sbjct: 280 VYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 6e-14
Identities = 53/264 (20%), Positives = 97/264 (36%), Gaps = 31/264 (11%)
Query: 72 VVYKGKLENQRR----IAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG 125
V++G + +A+K + +FL+EA ++ Q + + L+G
Sbjct: 30 DVHQGIYMSPENPALAVAIKTCKNCTSD-SVREKFLQEALTMRQFDHPHIVKLIG-VITE 87
Query: 126 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNA 184
+ ++ E L L + + A + L+ AL Y SK H D+ A
Sbjct: 88 NPVWIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKR--FVHRDIAA 144
Query: 185 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFG 239
+L + +L FGL + D Y + + PE + R T S ++ FG
Sbjct: 145 RNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG 204
Query: 240 TLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 294
+ ++L P + + I + + +C L L ++C
Sbjct: 205 VCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP---------TLYSLMTKCWA 255
Query: 295 YEPRERPNPKSLVTALSPLQKETE 318
Y+P RP L LS + +E +
Sbjct: 256 YDPSRRPRFTELKAQLSTILEEEK 279
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 71.7 bits (176), Expect = 7e-14
Identities = 47/291 (16%), Positives = 96/291 (32%), Gaps = 52/291 (17%)
Query: 73 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR--SVGQLRNNRLTNLLGCCCEGD---- 126
V++GK +AVK F+ + R + EA LR+ + + + +
Sbjct: 58 VWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113
Query: 127 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEY------CTSKGRALYH 180
+ LV++Y + +L +L + + +++ L A L + T A+ H
Sbjct: 114 QLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 170
Query: 181 -DLNAYRILFDEDGNPRLSTFGL----MKNSRDGKSYSTNLAFTP----PEYLRTGRVTP 231
DL + IL ++G ++ GL + + T PE L +
Sbjct: 171 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLD-DSINM 229
Query: 232 ESV-------IYSFGTLLLDLLSGKHI--------PPSHALDLIRDRNLQMLTDSCLEGQ 276
+ IY+ G + ++ I P + L +M C +
Sbjct: 230 KHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKL 289
Query: 277 --------FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 319
+ + + ++ C R + LS L ++ +
Sbjct: 290 RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 340
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 8e-14
Identities = 63/315 (20%), Positives = 116/315 (36%), Gaps = 44/315 (13%)
Query: 73 VYKGKL----ENQRRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 126
V G+L + + +A+K + R FL EA +GQ + + L G +
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTE-KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK 119
Query: 127 ERLLVAEYMPNETLAKHLFHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRALY-H-DL 182
++V EYM N +L L H ++ + + ++ +A ++Y + G Y H DL
Sbjct: 120 PVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDL 173
Query: 183 NAYRILFDEDGNPRLSTFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVTPESVI 235
A IL + + ++S FGL + D + T PE + + T S +
Sbjct: 174 AARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 236 YSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290
+S+G +L +++S P + + + C L +L
Sbjct: 234 WSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPA---------ALYQLML 284
Query: 291 RCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTA 350
C Q + RP + +V+ L L + P + + +A S L
Sbjct: 285 DCWQKDRNNRPKFEQIVSILDKLIRN---PGSLKIITSAAARPSNLLLDQSNVDITTFRT 341
Query: 351 IHEILEKIS---YKD 362
+ L + K+
Sbjct: 342 TGDWLNGVWTAHCKE 356
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 1e-13
Identities = 58/269 (21%), Positives = 102/269 (37%), Gaps = 38/269 (14%)
Query: 72 VVYKGKL----ENQRRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG 125
V G+L + +A+K + R FL EA +GQ + + L G G
Sbjct: 64 EVCYGRLRVPGQRDVPVAIKALKAGYTE-RQRRDFLSEASIMGQFDHPNIIRLEGVVTRG 122
Query: 126 DERLLVAEYMPNETLAKHLFHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRALY-H-D 181
++V EYM N +L L TH ++ + + ++ + + Y + G Y H D
Sbjct: 123 RLAMIVTEYMENGSLDTFL---RTHDGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRD 176
Query: 182 LNAYRILFDEDGNPRLSTFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVTPESV 234
L A +L D + ++S FGL + D +T T PE + + S
Sbjct: 177 LAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASD 236
Query: 235 IYSFGTLLLDLLSGKHIP-P----SHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 289
++SFG ++ ++L+ P + + + C L +L
Sbjct: 237 VWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPH---------ALHQLM 287
Query: 290 SRCLQYEPRERPNPKSLVTALSPLQKETE 318
C + +RP +V+ L L + E
Sbjct: 288 LDCWHKDRAQRPRFSQIVSVLDALIRSPE 316
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 70.4 bits (173), Expect = 2e-13
Identities = 59/290 (20%), Positives = 112/290 (38%), Gaps = 38/290 (13%)
Query: 73 VYKGKL-----ENQRRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG 125
VYKG L + + +A+K + FL EA +GQ ++ + L G +
Sbjct: 60 VYKGMLKTSSGKKEVPVAIKTLKAGYTE-KQRVDFLGEAGIMGQFSHHNIIRLEGVISKY 118
Query: 126 DERLLVAEYMPNETLAKHLFHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRALYH-DL 182
+++ EYM N L K L ++++ + ++ +A ++Y + H DL
Sbjct: 119 KPMMIITEYMENGALDKFL---REKDGEFSVLQLVGMLRGIAAGMKYLANMN--YVHRDL 173
Query: 183 NAYRILFDEDGNPRLSTFGL---MKNSRDGKSYSTNLAF----TPPEYLRTGRVTPESVI 235
A IL + + ++S FGL +++ + ++ T PE + + T S +
Sbjct: 174 AARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDV 233
Query: 236 YSFGTLLLDLLSGKHIP-P----SHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290
+SFG ++ ++++ P + I D C + +L
Sbjct: 234 WSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPS---------AIYQLMM 284
Query: 291 RCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLG 340
+C Q E RP +V+ L L + + L S+ S G
Sbjct: 285 QCWQQERARRPKFADIVSILDKLIRAPD-SLKTLADFDPRVSIRLPSTSG 333
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 2e-13
Identities = 50/276 (18%), Positives = 98/276 (35%), Gaps = 44/276 (15%)
Query: 73 VYKGKL----ENQRRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 126
V +G L ++AVK + + + + +FL EA + + + LLG C E
Sbjct: 50 VMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109
Query: 127 -----ERLLVAEYMPN----ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA 177
+ +++ +M L + L+ ++ +A +EY +++
Sbjct: 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN-- 167
Query: 178 LYH-DLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSY---STNLAF----TPPEYLRTG 227
H DL A + +D ++ FGL S+ Y E L
Sbjct: 168 FLHRDLAARNCMLRDDMTVCVADFGL---SKKIYSGDYYRQGRIAKMPVKWIAIESLADR 224
Query: 228 RVTPESVIYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 282
T +S +++FG + ++ + G + D + + + CL+
Sbjct: 225 VYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLD-------- 276
Query: 283 TELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 318
EL + C + +P +RP L L L +
Sbjct: 277 -ELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 4e-13
Identities = 53/279 (18%), Positives = 97/279 (34%), Gaps = 41/279 (14%)
Query: 72 VVYKGKLENQR-----RIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 126
V + + + +AVK+ R F E + L+++ + G C
Sbjct: 56 SVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 115
Query: 127 ER--LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLN 183
R L+ EY+P +L +L + + L+ + + +EY +K H DL
Sbjct: 116 RRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYLGTKR--YIHRDLA 172
Query: 184 AYRILFDEDGNPRLSTFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVTPESVIY 236
IL + + ++ FGL K K Y PE L + + S ++
Sbjct: 173 TRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVW 232
Query: 237 SFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV----RLA--- 289
SFG +L +L + S + +R +GQ EL+ RL
Sbjct: 233 SFGVVLYELFTYIEKSKSPPAEFMRMIGNDK------QGQMIVFHLIELLKNNGRLPRPD 286
Query: 290 ----------SRCLQYEPRERPNPKSLVTALSPLQKETE 318
+ C +RP+ + L + ++ +
Sbjct: 287 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 5e-13
Identities = 58/276 (21%), Positives = 103/276 (37%), Gaps = 41/276 (14%)
Query: 73 VYKGKLEN------QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 126
V+ + N + +AVK + F EA + L++ + G C +GD
Sbjct: 31 VFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD 90
Query: 127 ERLLVAEYMPN----ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT--SKGRALY- 179
++V EYM + + L H + + L L+Q L + + G Y
Sbjct: 91 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMV-YL 149
Query: 180 ------H-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS--TNLAF----TPPEYLRT 226
H DL L + ++ FG+ ++ Y + PPE +
Sbjct: 150 ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY 209
Query: 227 GRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 281
+ T ES ++SFG +L ++ + GK + + ++ I + C +
Sbjct: 210 RKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPK------- 262
Query: 282 GTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 317
E+ + C Q EP++R N K + L L K T
Sbjct: 263 --EVYDVMLGCWQREPQQRLNIKEIYKILHALGKAT 296
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 5e-13
Identities = 50/267 (18%), Positives = 98/267 (36%), Gaps = 35/267 (13%)
Query: 72 VVYKGKLENQRR-----IAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG 125
VYKG + +A+K P ++ L+EA + + N + LLG C
Sbjct: 30 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG-ICLT 88
Query: 126 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNA 184
L+ + MP L ++ + L + +A+ + Y + L H DL A
Sbjct: 89 STVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAA 145
Query: 185 YRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF----TPPEYLRTGRVTPESVIYSF 238
+L + +++ FGL K + + E + T +S ++S+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 239 GTLLLDLLS-GKH----IPPSHALDLIRD--RNLQMLTDSCLEGQFTDDDGTELVRLASR 291
G + +L++ G IP S ++ R Q C ++ + +
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTI---------DVYMIMRK 254
Query: 292 CLQYEPRERPNPKSLVTALSPLQKETE 318
C + RP + L+ S + ++ +
Sbjct: 255 CWMIDADSRPKFRELIIEFSKMARDPQ 281
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 70.0 bits (171), Expect = 6e-13
Identities = 52/264 (19%), Positives = 96/264 (36%), Gaps = 30/264 (11%)
Query: 72 VVYKGKLENQRR---IAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 127
V +G +++ +A+K + D + + EA+ + QL N + L+G C+ +
Sbjct: 351 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQAEA 409
Query: 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYR 186
+LV E L K L + + ++ ++ ++Y K H +L A
Sbjct: 410 LMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKN--FVHRNLAARN 466
Query: 187 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVTPESVIYSFG 239
+L ++S FGL K SY T L + PE + + + S ++S+G
Sbjct: 467 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG 526
Query: 240 TLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 294
+ + LS P + I C EL L S C
Sbjct: 527 VTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPP---------ELYALMSDCWI 577
Query: 295 YEPRERPNPKSLVTALSPLQKETE 318
Y+ +RP+ ++ +
Sbjct: 578 YKWEDRPDFLTVEQRMRACYYSLA 601
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} Length = 133 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 8e-13
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 2/106 (1%)
Query: 386 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 445
K KG+ F++ D A++ YT+ I +Y+ R+ CY Q AL D +
Sbjct: 20 KNKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCEECIQ 78
Query: 446 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 491
+ P + +AAAL AM +A ++ L+ A
Sbjct: 79 LEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLD-SSCKEAADG 123
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 9e-13
Identities = 52/285 (18%), Positives = 99/285 (34%), Gaps = 52/285 (18%)
Query: 73 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEA--RSVGQLRNNRLTNLLGCCCEGD---- 126
V++G + + +AVK F+ D + + E + LR+ + +
Sbjct: 24 VWRGSWQGEN-VAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSST 79
Query: 127 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEY------CTSKGRALYH 180
+ L+ Y +L +L + + LR+VL +A L + T A+ H
Sbjct: 80 QLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAH 136
Query: 181 -DLNAYRILFDEDGNPRLSTFGL----MKNSRDGKSYSTNLAFTP----PEYLRTGRVTP 231
DL + IL ++G ++ GL +++ + T PE L +
Sbjct: 137 RDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLD-ETIQV 195
Query: 232 ESV-------IYSFGTLLLDLLSGKHI--------PPSHALDLIRDRNLQMLTDSCLEGQ 276
+ I++FG +L ++ PP + + M C++ Q
Sbjct: 196 DCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQ 255
Query: 277 --------FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 313
F+D T L +L C P R + L+ +
Sbjct: 256 RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 9e-13
Identities = 48/291 (16%), Positives = 102/291 (35%), Gaps = 39/291 (13%)
Query: 72 VVYKGKLENQRR-----IAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG 125
V+KG + + +K + + + ++G L + + LLG C G
Sbjct: 28 TVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLG-LCPG 86
Query: 126 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNA 184
LV +Y+P +L H+ + + L + +A+ + Y G + H +L A
Sbjct: 87 SSLQLVTQYLPLGSLLDHV-RQHRGALGPQLLLNWGVQIAKGMYYLEEHG--MVHRNLAA 143
Query: 185 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSF 238
+L +++ FG+ + + E + G+ T +S ++S+
Sbjct: 144 RNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSY 203
Query: 239 GTLLLDLLS-GKH----IPPSHALDLIRD--RNLQMLTDSCLEGQFTDDDGTELVRLASR 291
G + +L++ G + + DL+ R Q C ++ + +
Sbjct: 204 GVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQP--QICTI---------DVYMVMVK 252
Query: 292 CLQYEPRERPNPKSLVTALSPLQKE----TEVPSHVLMGIPHSASVSPLSP 338
C + RP K L + + ++ + GI L+
Sbjct: 253 CWMIDENIRPTFKELANEFTRMARDPPRYLVIKRESGPGIAPGPEPHGLTN 303
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 1e-12
Identities = 55/264 (20%), Positives = 97/264 (36%), Gaps = 32/264 (12%)
Query: 72 VVYKGKLENQRR---IAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 126
V KG + ++ +AVK + + L EA + QL N + ++G CE +
Sbjct: 32 TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIG-ICEAE 90
Query: 127 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAY 185
+LV E L K+L K + +V ++ ++Y H DL A
Sbjct: 91 SWMLVMEMAELGPLNKYLQQNRHVKDK--NIIELVHQVSMGMKYLEESN--FVHRDLAAR 146
Query: 186 RILFDEDGNPRLSTFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVTPESVIYSF 238
+L ++S FGL K R ++Y T+ + PE + + + +S ++SF
Sbjct: 147 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 206
Query: 239 GTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 293
G L+ + S P S ++ C E+ L + C
Sbjct: 207 GVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR---------EMYDLMNLCW 257
Query: 294 QYEPRERPNPKSLVTALSPLQKET 317
Y+ RP ++ L +
Sbjct: 258 TYDVENRPGFAAVELRLRNYYYDV 281
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 1e-12
Identities = 55/307 (17%), Positives = 112/307 (36%), Gaps = 40/307 (13%)
Query: 72 VVYKGKLENQRR-----IAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG 125
VYKG + +A+K P ++ L+EA + + N + LLG C
Sbjct: 30 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG-ICLT 88
Query: 126 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNA 184
L+ + MP L ++ + L + +A+ + Y + L H DL A
Sbjct: 89 STVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAA 145
Query: 185 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSF 238
+L + +++ FGL K + + + E + T +S ++S+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 239 GTLLLDLLS-GKH----IPPSHALDLIRD--RNLQMLTDSCLEGQFTDDDGTELVRLASR 291
G + +L++ G IP S ++ R Q C ++ + +
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTI---------DVYMIMVK 254
Query: 292 CLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAI 351
C + RP + L+ S + ++ + + I + SP ++ R L
Sbjct: 255 CWMIDADSRPKFRELIIEFSKMARDPQ----RYLVIQGDERMHLPSP-TDSNFYRALMDE 309
Query: 352 HEILEKI 358
++ + +
Sbjct: 310 EDMDDVV 316
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} Length = 126 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 1e-12
Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Query: 386 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 445
K KG+ F++ D A+ Y + + + +Y+ R+ C Q AL+D
Sbjct: 17 KNKGNEYFKKGDYPTAMRHYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTCIR 75
Query: 446 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488
+ + +AA L AM ++AQ A ++ ++ N A
Sbjct: 76 LDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVD-PSNEEA 117
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* Length = 137 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 1e-12
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 7/109 (6%)
Query: 386 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTV---YARRSLCYLMSDMPQDALNDAMQ 442
K++G+ F + +A CY + I +P V Y R+LCYL P+ AL D +
Sbjct: 13 KEQGNRLFVGRKYPEAAACYGRAIT----RNPLVAVYYTNRALCYLKMQQPEQALADCRR 68
Query: 443 AQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 491
A + A + M +EA L+ +L ++ G
Sbjct: 69 ALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDD 117
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 Length = 281 | Back alignment and structure |
|---|
Score = 67.3 bits (164), Expect = 1e-12
Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Query: 386 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 445
K++G+ F + +A CY + I + Y R+LCYL P+ AL D +A
Sbjct: 8 KEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALE 66
Query: 446 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 491
+ A + M +EA L+ +L ++ G
Sbjct: 67 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDD 112
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 67.8 bits (165), Expect = 2e-12
Identities = 42/280 (15%), Positives = 70/280 (25%), Gaps = 49/280 (17%)
Query: 72 VVYKGK-LENQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLR---NNRLTNLLGCCCE 124
VV+ + +E A+K F A + E + +L +
Sbjct: 77 VVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLP 136
Query: 125 GD-----------------------ERLLVAEYMP--NETLAKHLFHWET--HPMKWAMR 157
D LL+ E L L
Sbjct: 137 SDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILAL 196
Query: 158 LRVVLHLAQALEYCTSKGRALYH-DL---NAYRILFDEDGNPRLSTFGL-MKNSRDGKSY 212
+ L + SKG L H N + DG L K G +
Sbjct: 197 HILTAQLIRLAANLQSKG--LVHGHFTPDN---LFIMPDGRLMLGDVSALWKVGTRGPAS 251
Query: 213 STNLAFTPPEYL--RTGRVTPESVIYSFGTLLLDLLSGK---HIPPSHALDLIRDRNLQM 267
S + + P E+L T T + G + + + + +L++
Sbjct: 252 SVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRV 311
Query: 268 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 307
L + L R L ++ R R P +
Sbjct: 312 PGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAM 351
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A Length = 166 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 2e-12
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 377 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDA 436
++ K + + F+ KD ++AI+ Y+Q I+ + Y RSL YL ++ A
Sbjct: 8 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIEL-NPSNAIYYGNRSLAYLRTECYGYA 66
Query: 437 LNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE 481
L DA +A + + Y +AA+ A+G A + ++
Sbjct: 67 LGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVK 111
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 67.8 bits (165), Expect = 2e-12
Identities = 48/337 (14%), Positives = 82/337 (24%), Gaps = 80/337 (23%)
Query: 72 VVYKGK-LENQRRIAVK---RFNRMAWPDPRQFLEEARSVGQLRNNR------------- 114
+ E V R +Q EE + LR +
Sbjct: 93 AYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIF 152
Query: 115 ---LTNLLGCCCEGDER-------------LLVAEYMPNETLAKHLFHW--ETHPMKWAM 156
L R L +T + L +
Sbjct: 153 PFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHA 212
Query: 157 RLRVVLHLAQALEYCTSKGRALYH-DL---NAYRILFDEDGNPRLSTFGLMKNSRDGKSY 212
RL++ L + + L G L H L + I+ D+ G L+ F +
Sbjct: 213 RLQLTLQVIRLLASLHHYG--LVHTYLRPVD---IVLDQRGGVFLTGFEHLVRDGASAVS 267
Query: 213 STNLAFTPPEYL----------RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD 262
F PPE +T ++ G + + P+ +
Sbjct: 268 PIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD--LPNTDDAALGG 325
Query: 263 RNLQMLTDSCLEGQFTDDDGT--ELVRLASRCLQYEPRERPNP------------KSLVT 308
E F + L L+Y +R P ++ ++
Sbjct: 326 ----------SEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTELS 375
Query: 309 ALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSR 345
A PL + P+ P S + EA +
Sbjct: 376 AALPLYQTDGEPTREGGAPPSGTSQPDEAGAAEAVTA 412
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 2e-12
Identities = 56/263 (21%), Positives = 100/263 (38%), Gaps = 29/263 (11%)
Query: 72 VVYKGKLENQR----RIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGD 126
VY+G N + +AVK + D ++ F+ EA + L + + L+G E +
Sbjct: 27 EVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG-IIEEE 85
Query: 127 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAY 185
++ E P L +L + + + L + +A+ Y S H D+
Sbjct: 86 PTWIIMELYPYGELGHYLERNKNSLKVLTL-VLYSLQICKAMAYLESIN--CVHRDIAVR 142
Query: 186 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGT 240
IL +L FGL + D Y ++ + PE + R T S ++ F
Sbjct: 143 NILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAV 202
Query: 241 LLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 295
+ ++LS P + ++ + D C L L +RC Y
Sbjct: 203 CMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPP---------VLYTLMTRCWDY 253
Query: 296 EPRERPNPKSLVTALSPLQKETE 318
+P +RP LV +LS + + +
Sbjct: 254 DPSDRPRFTELVCSLSDVYQMEK 276
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 3e-12
Identities = 53/281 (18%), Positives = 96/281 (34%), Gaps = 45/281 (16%)
Query: 72 VVYKGKLE-----NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 126
V + + +AVK+ R F E + L+++ + G C
Sbjct: 25 SVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 84
Query: 127 ER--LLVAEYMPNETLAKHLFHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRALYH-D 181
R L+ EY+P +L +L + H + L+ + + +EY +K H D
Sbjct: 85 RRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKR--YIHRD 139
Query: 182 LNAYRILFDEDGNPRLSTFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVTPESV 234
L IL + + ++ FGL K K + PE L + + S
Sbjct: 140 LATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASD 199
Query: 235 IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV----RLA- 289
++SFG +L +L + S + +R +GQ EL+ RL
Sbjct: 200 VWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK------QGQMIVFHLIELLKNNGRLPR 253
Query: 290 ------------SRCLQYEPRERPNPKSLVTALSPLQKETE 318
+ C +RP+ + L + ++
Sbjct: 254 PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 3e-12
Identities = 52/274 (18%), Positives = 97/274 (35%), Gaps = 38/274 (13%)
Query: 73 VYKGKLENQR------RIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG 125
VY+G++ ++AVK + D FL EA + + + + +G +
Sbjct: 46 VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105
Query: 126 DERLLVAEYMPNETLAKHL-----FHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180
R ++ E M L L + + L V +A +Y H
Sbjct: 106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIH 163
Query: 181 -DLNAYRILFDEDGNPRL---STFGLMKNSRDGKSYSTNLA------FTPPEYLRTGRVT 230
D+ A L G R+ FG+ ++ Y + PPE G T
Sbjct: 164 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFT 223
Query: 231 PESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 285
++ +SFG LL ++ S G L+ + +C +
Sbjct: 224 SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPG---------PV 274
Query: 286 VRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 319
R+ ++C Q++P +RPN ++ + ++ +V
Sbjct: 275 YRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 308
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 4e-12
Identities = 57/277 (20%), Positives = 99/277 (35%), Gaps = 44/277 (15%)
Query: 73 VYKGKLENQR------RIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG 125
VY+G++ ++AVK + D FL EA + + + + +G +
Sbjct: 87 VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 146
Query: 126 DERLLVAEYMPNETLAKHL---FHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRALYH 180
R ++ E M L L + P AM L V +A +Y H
Sbjct: 147 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIH 204
Query: 181 -DLNAYRILFDEDGNPRL---STFGLMKNSRD--GKSY---STNLAF----TPPEYLRTG 227
D+ A L G R+ FG+ +RD Y PPE G
Sbjct: 205 RDIAARNCLLTCPGPGRVAKIGDFGM---ARDIYRAGYYRKGGCAMLPVKWMPPEAFMEG 261
Query: 228 RVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 282
T ++ +SFG LL ++ S G L+ + +C
Sbjct: 262 IFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPG-------- 313
Query: 283 TELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 319
+ R+ ++C Q++P +RPN ++ + ++ +V
Sbjct: 314 -PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 349
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 5e-12
Identities = 60/283 (21%), Positives = 100/283 (35%), Gaps = 42/283 (14%)
Query: 73 VYKGKLENQR------RIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 126
V+ + N +AVK + + F EA + L++ + G C EG
Sbjct: 57 VFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR 116
Query: 127 ERLLVAEYMPNETLAKHL-------------FHWETHPMKWAMRLRVVLHLAQALEYCTS 173
L+V EYM + L + L P+ L V +A + Y
Sbjct: 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG 176
Query: 174 KGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF----TPPEYLRT 226
H DL L + ++ FG+ ++ Y PPE +
Sbjct: 177 LH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY 234
Query: 227 GRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 281
+ T ES ++SFG +L ++ + GK + + A+D I +C
Sbjct: 235 RKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPP------- 287
Query: 282 GTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVL 324
E+ + C Q EP++R + K + L L + V VL
Sbjct: 288 --EVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPVYLDVL 328
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 65.3 bits (160), Expect = 5e-12
Identities = 51/264 (19%), Positives = 95/264 (35%), Gaps = 30/264 (11%)
Query: 72 VVYKGKLENQRR---IAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 127
V +G +++ +A+K + D + + EA+ + QL N + L+G C+ +
Sbjct: 25 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQAEA 83
Query: 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYR 186
+LV E L K L + + ++ ++ ++Y K H DL A
Sbjct: 84 LMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKN--FVHRDLAARN 140
Query: 187 ILFDEDGNPRLSTFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVTPESVIYSFG 239
+L ++S FGL K SY + + PE + + + S ++S+G
Sbjct: 141 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG 200
Query: 240 TLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 294
+ + LS P + I C EL L S C
Sbjct: 201 VTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPP---------ELYALMSDCWI 251
Query: 295 YEPRERPNPKSLVTALSPLQKETE 318
Y+ +RP+ ++ +
Sbjct: 252 YKWEDRPDFLTVEQRMRACYYSLA 275
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 65.3 bits (160), Expect = 6e-12
Identities = 53/261 (20%), Positives = 96/261 (36%), Gaps = 34/261 (13%)
Query: 72 VVYKGKL----ENQRRIAVK--RFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCE 124
VV +G+ +AVK + + ++ P+ F+ E ++ L + L L G
Sbjct: 33 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG-VVL 91
Query: 125 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLN 183
+V E P +L L R + +A+ + Y SK H DL
Sbjct: 92 TPPMKMVTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLA 148
Query: 184 AYRILFDEDGNPRLSTFGLMKN-SRDGKSYSTN------LAFTPPEYLRTGRVTPESVIY 236
A +L ++ FGLM+ ++ Y A+ PE L+T + S +
Sbjct: 149 ARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTW 208
Query: 237 SFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLAS 290
FG L ++ + P S L I ++ + C + ++ +
Sbjct: 209 MFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQ---------DIYNVMV 259
Query: 291 RCLQYEPRERPNPKSLVTALS 311
+C ++P +RP +L L
Sbjct: 260 QCWAHKPEDRPTFVALRDFLL 280
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 148 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 6e-12
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 386 KKKGDVAFRQKDLKDAIECYTQFI--DAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQA 443
+K+G+ F+ D A+ YTQ + DA ++ R+ C+L + A +A +A
Sbjct: 32 RKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKA 91
Query: 444 QIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488
A Y ++ AL +G ++A + L+ +LE KN
Sbjct: 92 IEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLE-PKNKVF 135
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 7e-12
Identities = 45/249 (18%), Positives = 87/249 (34%), Gaps = 25/249 (10%)
Query: 73 VYKGK-LENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCC---CEGD 126
VYKG E +A + ++F EEA + L++ + +G
Sbjct: 42 VYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGK 101
Query: 127 ERL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNA 184
+ + LV E M + TL +L MK + + + L++ ++ + H DL
Sbjct: 102 KCIVLVTELMTSGTLKTYL--KRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKC 159
Query: 185 YRILFD-EDGNPRLSTFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVTPESVIYSFGTL 241
I G+ ++ GL R + + F PE +Y+FG
Sbjct: 160 DNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEK-YDESVDVYAFGMC 218
Query: 242 LLDLLSGKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 297
+L++ + ++ + + +T F E+ + C++
Sbjct: 219 MLEMATSEYPYSECQNAAQIYRR-------VTSGVKPASFDKVAIPEVKEIIEGCIRQNK 271
Query: 298 RERPNPKSL 306
ER + K L
Sbjct: 272 DERYSIKDL 280
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 65.9 bits (161), Expect = 7e-12
Identities = 60/282 (21%), Positives = 103/282 (36%), Gaps = 47/282 (16%)
Query: 73 VYKGKL--------ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRN-NRLTNLLGCC 122
V + ++AVK A D + E + + + NLLG C
Sbjct: 85 VVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144
Query: 123 CEGDERLLVAEYMPNETLAKHL----------FHWETHPMKWAMRLRVVLHL----AQAL 168
+ ++ EY L ++L + +H + + + ++ A+ +
Sbjct: 145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGM 204
Query: 169 EYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF----TPP 221
EY SK H DL A +L ED +++ FGL ++ Y +TN P
Sbjct: 205 EYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 262
Query: 222 EYLRTGRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQ 276
E L T +S ++SFG LL ++ + G +P L+++ + +C
Sbjct: 263 EALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTN-- 320
Query: 277 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 318
EL + C P +RP K LV L + T
Sbjct: 321 -------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 355
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 1e-11
Identities = 51/275 (18%), Positives = 97/275 (35%), Gaps = 45/275 (16%)
Query: 73 VYKGKLE-----NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 126
V + + ++AVK + +E + L + + G C E
Sbjct: 37 VELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG 96
Query: 127 ER--LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLN 183
L+ E++P+ +L ++L + + +L+ + + + ++Y S+ H DL
Sbjct: 97 GNGIKLIMEFLPSGSLKEYLPK-NKNKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLA 153
Query: 184 AYRILFDEDGNPRLSTFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVTPESVIY 236
A +L + + ++ FGL K K Y + PE L + S ++
Sbjct: 154 ARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVW 213
Query: 237 SFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV----RLAS- 290
SFG L +LL+ AL L GQ T + RL
Sbjct: 214 SFGVTLHELLTYCDSDSSPMALFLKMIGPTH--------GQMTVTRLVNTLKEGKRLPCP 265
Query: 291 ------------RCLQYEPRERPNPKSLVTALSPL 313
+C +++P R + ++L+ L
Sbjct: 266 PNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 65.0 bits (158), Expect = 1e-11
Identities = 33/194 (17%), Positives = 58/194 (29%), Gaps = 34/194 (17%)
Query: 129 LLVAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DL--- 182
L +T + L + RL++ L + + L G L H L
Sbjct: 178 LYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--LVHTYLRPV 235
Query: 183 NAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYL-----------RTGRVTP 231
+ I+ D+ G L+ F + S + F PPE R +T
Sbjct: 236 D---IVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTF 292
Query: 232 ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR-LAS 290
++ G ++ + P I ++ + + VR L
Sbjct: 293 SFDAWALGLVIYWIWCAD--LP------ITKDAALGGSEWIFRS---CKNIPQPVRALLE 341
Query: 291 RCLQYEPRERPNPK 304
L+Y +R P
Sbjct: 342 GFLRYPKEDRLLPL 355
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 1e-11
Identities = 61/278 (21%), Positives = 108/278 (38%), Gaps = 45/278 (16%)
Query: 73 VYKGKL---ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNN-RLTNLLGCCCEGDE 127
V K ++ + A+KR A D R F E + +L ++ + NLLG C
Sbjct: 41 VLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY 100
Query: 128 RLLVAEYMPNETLAKHL----------FHWETHPMKWAMRLRVVLHL----AQALEYCTS 173
L EY P+ L L + + + +LH A+ ++Y +
Sbjct: 101 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ 160
Query: 174 KGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF----TPPEYLRT 226
K H DL A IL E+ +++ FGL SR + Y T E L
Sbjct: 161 KQ--FIHRDLAARNILVGENYVAKIADFGL---SRGQEVYVKKTMGRLPVRWMAIESLNY 215
Query: 227 GRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 281
T S ++S+G LL +++S G + + + + +C +
Sbjct: 216 SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDD------- 268
Query: 282 GTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 319
E+ L +C + +P ERP+ ++ +L+ + +E +
Sbjct: 269 --EVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 304
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 Length = 131 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 2e-11
Identities = 23/108 (21%), Positives = 43/108 (39%), Gaps = 12/108 (11%)
Query: 386 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT---VYARRSLCYLMSDMPQDALNDAMQ 442
K +G+ + ++ + A+ Y + I+ ++P + R+ Y A+ D +
Sbjct: 16 KTEGNEQMKVENFEAAVHFYGKAIE----LNPANAVYFCNRAAAYSKLGNYAGAVQDCER 71
Query: 443 AQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE-----AKKN 485
A I P + A ALS++ EA K+ L+ K N
Sbjct: 72 AICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSN 119
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 3e-11
Identities = 63/300 (21%), Positives = 103/300 (34%), Gaps = 49/300 (16%)
Query: 73 VYKGKL-----ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 127
V + +AVK+ R F E + + L ++ + G
Sbjct: 39 VELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR 98
Query: 128 R--LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT--SKG------RA 177
+ LV EY+P+ L L R R L ++ L Y + KG R
Sbjct: 99 QSLRLVMEYLPSGCLRDFL-----------QRHRARLDASRLLLYSSQICKGMEYLGSRR 147
Query: 178 LYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRV 229
H DL A IL + + + +++ FGL K K Y PE L
Sbjct: 148 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 207
Query: 230 TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG------- 282
+ +S ++SFG +L +L + S + + +R + + ++G
Sbjct: 208 SRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPP 267
Query: 283 ---TELVRLASRCLQYEPRERPNPKSLVTAL-----SPLQKETEVPSHVLMGIPHSASVS 334
E+ L C P++RP+ +L L ET + G HS S S
Sbjct: 268 ACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCETHAFTAHPEGKHHSLSFS 327
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 63.0 bits (154), Expect = 3e-11
Identities = 54/270 (20%), Positives = 95/270 (35%), Gaps = 42/270 (15%)
Query: 73 VYKGKLENQR------RIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEG 125
VYKG L +A+K A R+ F EA +L++ + LLG +
Sbjct: 25 VYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKD 84
Query: 126 DERLLVAEYMPN----ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT--SKGRALY 179
++ Y + E L H + ++ L + + G Y
Sbjct: 85 QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGME-Y 143
Query: 180 -------H-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA------FTPPEYLR 225
H DL +L + N ++S GL + Y + PE +
Sbjct: 144 LSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIM 203
Query: 226 TGRVTPESVIYSFGTLLLDLLSGKHIP-PSHA----LDLIRDRNLQMLTDSCLEGQFTDD 280
G+ + +S I+S+G +L ++ S P ++ +++IR+R + D C
Sbjct: 204 YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPA------ 257
Query: 281 DGTELVRLASRCLQYEPRERPNPKSLVTAL 310
+ L C P RP K + + L
Sbjct: 258 ---WVYALMIECWNEFPSRRPRFKDIHSRL 284
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} Length = 126 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 4e-11
Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Query: 386 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 445
+ +G F + D +A++ YT+ I Y+ R+ +A+ D +A
Sbjct: 8 RLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIE 66
Query: 446 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 491
P + A +A A A+ A L T +A+ N+ + +
Sbjct: 67 KDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAR 112
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 62.1 bits (151), Expect = 7e-11
Identities = 39/251 (15%), Positives = 77/251 (30%), Gaps = 43/251 (17%)
Query: 61 IVSEHGEKAPNVVYKG---KLENQRRIAVK--RFNRMAWPDPRQ-FLEEARSVGQLRNNR 114
++ HG P ++ L+ R++A+ + D Q L + ++
Sbjct: 35 LLIFHGGVPPLQFWQALDTALD--RQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPG 92
Query: 115 LTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK 174
+ +L L+VAE++ +L + +T P +R + LA A +
Sbjct: 93 VARVLDVVHTRAGGLVVAEWIRGGSLQEVA---DTSPSPVGA-IRAMQSLAAAADAAHRA 148
Query: 175 GRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPES 233
G + + R+ DG+ L+ M P+
Sbjct: 149 G--VALSIDHPSRVRVSIDGDVVLAYPATM-----------------------PDANPQD 183
Query: 234 VIYSFGTLLLDLLSGKHIPP---SHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290
I G L LL + P + + D ++ +A+
Sbjct: 184 DIRGIGASLYALLVNR--WPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAA 241
Query: 291 RCLQYEPRERP 301
R +Q + R
Sbjct: 242 RSVQGDGGIRS 252
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 8e-11
Identities = 59/292 (20%), Positives = 108/292 (36%), Gaps = 47/292 (16%)
Query: 73 VYKGKL--------ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNR-LTNLLGCC 122
V + + +AVK A D + E + + ++ + NLLG C
Sbjct: 51 VVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 110
Query: 123 CEGDERLLVAEYMPNETLAKHL----------FHWETHPMKWAMRLRVVLHL----AQAL 168
+ ++ EY L ++L + + M + ++ A+ +
Sbjct: 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 170
Query: 169 EYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF----TPP 221
EY S+ H DL A +L E+ +++ FGL ++ + Y +TN P
Sbjct: 171 EYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228
Query: 222 EYLRTGRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQ 276
E L T +S ++SFG L+ ++ + G IP L+++ + +C
Sbjct: 229 EALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTN-- 286
Query: 277 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIP 328
EL + C P +RP K LV L + T ++ + P
Sbjct: 287 -------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLDLSQP 331
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 2e-10
Identities = 45/244 (18%), Positives = 92/244 (37%), Gaps = 19/244 (7%)
Query: 73 VYKGK-LENQRRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 129
K E+ R+ +K +RM+ + + E + +++ + E
Sbjct: 40 AILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLY 99
Query: 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 189
+V +Y L K + + + L + + AL++ + + L+ D+ + I
Sbjct: 100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR-KILHRDIKSQNIFL 158
Query: 190 DEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDL 245
+DG +L FG+ + + TP PE +S I++ G +L +L
Sbjct: 159 TKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYEL 218
Query: 246 LSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT---ELVRLASRCLQYEPRERPN 302
+ K A +++ L + G F +L L S+ + PR+RP+
Sbjct: 219 CTLK--HAFEA------GSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPS 270
Query: 303 PKSL 306
S+
Sbjct: 271 VNSI 274
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 4e-10
Identities = 51/260 (19%), Positives = 85/260 (32%), Gaps = 53/260 (20%)
Query: 72 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARS-VGQLRN-NRLTNL--LGCCCEGDE 127
+VY+G +N R +AVKR + A V LR + N+ C + +
Sbjct: 40 IVYRGMFDN-RDVAVKRILP-------ECFSFADREVQLLRESDEHPNVIRYFCTEKDRQ 91
Query: 128 RL-LVAEYMPNE----TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-D 181
+ E K H P+ ++ L + S + H D
Sbjct: 92 FQYIAIELCAATLQEYVEQKDFAHLGLEPIT------LLQQTTSGLAHLHSLN--IVHRD 143
Query: 182 LNAYRILF---DEDGNPR--LSTFGLMKNSRDGKSYSTNLAF---TP----PEYLR---T 226
L + IL + G + +S FGL K G+ + + T PE L
Sbjct: 144 LKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCK 203
Query: 227 GRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDD 281
T I+S G + ++S P A L+ +L L +
Sbjct: 204 ENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPE-------KHE 256
Query: 282 GTELVRLASRCLQYEPRERP 301
L + + +P++RP
Sbjct: 257 DVIARELIEKMIAMDPQKRP 276
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 4e-10
Identities = 58/282 (20%), Positives = 104/282 (36%), Gaps = 47/282 (16%)
Query: 73 VYKGKL--------ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNR-LTNLLGCC 122
V + + +AVK A D + E + + ++ + NLLG C
Sbjct: 97 VVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 156
Query: 123 CEGDERLLVAEYMPNETLAKHL----------FHWETHPMKWAMRLRVVLHL----AQAL 168
+ ++ EY L ++L + + M + ++ A+ +
Sbjct: 157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 216
Query: 169 EYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF----TPP 221
EY S+ H DL A +L E+ +++ FGL ++ + Y +TN P
Sbjct: 217 EYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 274
Query: 222 EYLRTGRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQ 276
E L T +S ++SFG L+ ++ + G IP L+++ + +C
Sbjct: 275 EALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTN-- 332
Query: 277 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 318
EL + C P +RP K LV L + T
Sbjct: 333 -------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 367
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 Length = 477 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 4e-10
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 386 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 445
K + + F+ KD ++AI+ Y+Q I+ + Y RSL YL ++ AL DA +A
Sbjct: 10 KTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIE 68
Query: 446 ISPIWHIASYLQAAALSAMGMENEAQVALK 475
+ + Y +AA+ A+G A +
Sbjct: 69 LDKKYIKGYYRRAASNMALGKFRAALRDYE 98
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 6e-10
Identities = 52/245 (21%), Positives = 84/245 (34%), Gaps = 26/245 (10%)
Query: 73 VYKG-KLENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNR-LTNLLGCCCEGDER 128
V+K E+ R AVKR D + L E S ++ + L EG
Sbjct: 73 VFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGIL 132
Query: 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRIL 188
L E +L +H W + A + AL + S+G ++ D+ I
Sbjct: 133 YLQTELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQG-LVHLDVKPANIF 189
Query: 189 FDEDGNPRLSTFGLMKN-SRDGKSYSTNLAF--TP----PEYLRTGRVTPESVIYSFGTL 241
G +L FGL+ G P PE L+ + ++S G
Sbjct: 190 LGPRGRCKLGDFGLLVELGTAGAGEV----QEGDPRYMAPELLQGSY-GTAADVFSLGLT 244
Query: 242 LLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 301
+L++ P Q L L +FT +EL + L+ +P+ R
Sbjct: 245 ILEVACNME-LPHGG------EGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRA 297
Query: 302 NPKSL 306
++L
Sbjct: 298 TAEAL 302
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 7e-10
Identities = 62/279 (22%), Positives = 104/279 (37%), Gaps = 52/279 (18%)
Query: 73 VYKGKL------ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG 125
V K +AVK A + R L E + Q+ + + L G C +
Sbjct: 39 VVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98
Query: 126 DERLLVAEYMPN------------------ETLAKHLFHWETHPMKWAMRLRVVLH---- 163
LL+ EY + HP + A+ + ++
Sbjct: 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQ 158
Query: 164 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF-- 218
++Q ++Y L H DL A IL E ++S FGL ++ + SY +
Sbjct: 159 ISQGMQYLAEMK--LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPV 216
Query: 219 --TPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDS 271
E L T +S ++SFG LL ++++ G + IPP +L++ + D+
Sbjct: 217 KWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDN 276
Query: 272 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 310
C E E+ RL +C + EP +RP + L
Sbjct: 277 CSE---------EMYRLMLQCWKQEPDKRPVFADISKDL 306
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 8e-10
Identities = 64/291 (21%), Positives = 103/291 (35%), Gaps = 50/291 (17%)
Query: 73 VYKGKLEN------QRRIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEG 125
V++ + +AVK A D + F EA + + N + LLG C G
Sbjct: 63 VFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG 122
Query: 126 DERLLVAEYMPN------------ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT- 172
L+ EYM T+ + + + L A+ L
Sbjct: 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQ 182
Query: 173 -SKGRALY-------H-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF--- 218
+ G A Y H DL L E+ +++ FGL +N Y N A
Sbjct: 183 VAAGMA-YLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIR 241
Query: 219 -TPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSC 272
PPE + R T ES ++++G +L ++ S G + + +RD N+ ++C
Sbjct: 242 WMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENC 301
Query: 273 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHV 323
EL L C P +RP+ S+ L + + E V
Sbjct: 302 PL---------ELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEGTVGV 343
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} Length = 111 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 8e-10
Identities = 16/99 (16%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
Query: 379 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALN 438
M + K++G+ F+Q ++A+ CY Q I A +P Y+ +++ + A+
Sbjct: 1 MSQFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ-NPVGYSNKAMALIKLGEYTQAIQ 59
Query: 439 DAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEG 477
Q + +++ + + A +++
Sbjct: 60 MCQQGLRYTSTAEHV-AIRSKLQYRLELAQGAVGSVQIP 97
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 57.2 bits (139), Expect = 3e-09
Identities = 39/192 (20%), Positives = 75/192 (39%), Gaps = 16/192 (8%)
Query: 72 VVYKGK-LENQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLRNNRLTNLLGCCCEGDE 127
VY + ++A+K ++F E + QL + + +++ E D
Sbjct: 26 TVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDC 85
Query: 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYR 186
LV EY+ TL++++ P+ + + +++ + H D+
Sbjct: 86 YYLVMEYIEGPTLSEYIE--SHGPLSVDTAINFTNQILDGIKHAHDMR--IVHRDIKPQN 141
Query: 187 ILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF-TP----PEYLRTGRVTPESVIYSFGTL 241
IL D + ++ FG+ K + TN T PE + + IYS G +
Sbjct: 142 ILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIV 201
Query: 242 LLDLLSGKHIPP 253
L ++L G+ PP
Sbjct: 202 LYEMLVGE--PP 211
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 3e-09
Identities = 55/250 (22%), Positives = 100/250 (40%), Gaps = 20/250 (8%)
Query: 66 GEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 124
G+ A VY + + +A+++ N P + E + + +N + N L
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 125 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 184
GDE +V EY+ +L + M V QALE+ S ++ D+ +
Sbjct: 89 GDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSNQV-IHRDIKS 144
Query: 185 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 240
IL DG+ +L+ FG +S + + TP PE + P+ I+S G
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 241 LLLDLLSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 296
+ ++++ G+ + P AL LI L + + + +RCL+ +
Sbjct: 205 MAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP---EKLSA----IFRDFLNRCLEMD 257
Query: 297 PRERPNPKSL 306
+R + K L
Sbjct: 258 VEKRGSAKEL 267
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 3e-09
Identities = 55/283 (19%), Positives = 97/283 (34%), Gaps = 48/283 (16%)
Query: 73 VYKGKL------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRN-NRLTNLLGCCCE 124
V + + +AVK A + + E + + L N + NLLG C
Sbjct: 39 VVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI 98
Query: 125 GDERLLVAEYMPN------------ETLAKHLFHWETHPMKWAMRLRVVLHL----AQAL 168
G L++ EY + + A+ L +L A+ +
Sbjct: 99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGM 158
Query: 169 EYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF----TPP 221
+ SK H DL A IL ++ FGL ++ ++ +Y N P
Sbjct: 159 AFLASKN--CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP 216
Query: 222 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIP----PSHA--LDLIRDRNLQMLTDSCLEG 275
E + T ES ++S+G L +L S P P + +I++ + +
Sbjct: 217 ESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPA- 275
Query: 276 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 318
E+ + C +P +RP K +V + E+
Sbjct: 276 --------EMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 4e-09
Identities = 53/290 (18%), Positives = 101/290 (34%), Gaps = 51/290 (17%)
Query: 72 VVYKGK-LENQRRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 128
VV++ K + A+K R + + E +++ +L + + E +
Sbjct: 20 VVFEAKNKVDDCNYAIKRIRLPNREL-AREKVMREVKALAKLEHPGIVRYFNAWLEKNTT 78
Query: 129 L------------LVAEYMPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTSKG 175
+ + E L + T + ++ L + L +A+A+E+ SKG
Sbjct: 79 EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG 138
Query: 176 RALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV-TP-- 231
L H DL I F D ++ FGL+ + T L P TG+V T
Sbjct: 139 --LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLY 196
Query: 232 -------------ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 278
+ I+S G +L +LL P S ++ +R +F
Sbjct: 197 MSPEQIHGNSYSHKVDIFSLGLILFELL----YPFSTQMERVR------TLTDVRNLKFP 246
Query: 279 DDDGT---ELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLM 325
+ L P ERP +++ + + ++ + P ++
Sbjct: 247 PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE--NAVFEDLDFPGKTVL 294
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 5e-09
Identities = 54/283 (19%), Positives = 92/283 (32%), Gaps = 54/283 (19%)
Query: 73 VYKGKL------ENQRRIAVKRFNRMA-WPDPRQFLEEAR---SVGQLRNNRLTNLLGCC 122
V + + ++AVK A + + E + +GQ N + NLLG C
Sbjct: 62 VVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN--IVNLLGAC 119
Query: 123 CEGDERLLVAEYMPN------------ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEY 170
G L++ EY F L +AQ + +
Sbjct: 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAF 179
Query: 171 CTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRD---GKSY--STNLAF----TP 220
SK H D+ A +L ++ FGL +RD +Y N
Sbjct: 180 LASKN--CIHRDVAARNVLLTNGHVAKIGDFGL---ARDIMNDSNYIVKGNARLPVKWMA 234
Query: 221 PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP----PSHA--LDLIRDRNLQMLTDSCLE 274
PE + T +S ++S+G LL ++ S P ++ L++D +
Sbjct: 235 PESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPK 294
Query: 275 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 317
+ + C EP RP + + + L +E
Sbjct: 295 ---------NIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 6e-09
Identities = 52/272 (19%), Positives = 102/272 (37%), Gaps = 31/272 (11%)
Query: 73 VYKGK-LENQRRIAVKR---FNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 128
VY+ L + +A+K+ F+ M ++E + QL + + E +E
Sbjct: 48 VYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNEL 107
Query: 129 LLVAEYMPNETLAKHL--FHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAY 185
+V E L++ + F + + + + L ALE+ S+ + H D+
Sbjct: 108 NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR--VMHRDIKPA 165
Query: 186 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTL 241
+ G +L GL + + + +L TP PE + +S I+S G L
Sbjct: 166 NVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCL 225
Query: 242 LLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF----TDDDGTELVRLASRCLQYEP 297
L ++ + + P + NL L + + +D EL +L + C+ +P
Sbjct: 226 LYEMAALQ--SPFYG----DKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDP 279
Query: 298 RERPN-------PKSLVTALSPLQKETEVPSH 322
+RP+ K + + + H
Sbjct: 280 EKRPDVTYVYDVAKRMHACTASSLEHHH-HHH 310
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 6e-09
Identities = 50/250 (20%), Positives = 95/250 (38%), Gaps = 20/250 (8%)
Query: 66 GEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 124
GE + +V + + R++AVK + E + ++ + +
Sbjct: 54 GEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLV 113
Query: 125 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 184
G+E ++ E++ L + + V + QAL Y ++G ++ D+ +
Sbjct: 114 GEELWVLMEFLQGGALTDIV---SQVRLNEEQIATVCEAVLQALAYLHAQGV-IHRDIKS 169
Query: 185 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 240
IL DG +LS FG +L TP PE + E I+S G
Sbjct: 170 DSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGI 229
Query: 241 LLLDLLSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 296
++++++ G+ P A+ +RD L +S + + L R L +
Sbjct: 230 MVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNS---HKVSP----VLRDFLERMLVRD 282
Query: 297 PRERPNPKSL 306
P+ER + L
Sbjct: 283 PQERATAQEL 292
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 9e-09
Identities = 54/282 (19%), Positives = 97/282 (34%), Gaps = 47/282 (16%)
Query: 73 VYKGKL------ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNN-RLTNLLGCCCE 124
V + R +AVK A + R + E + + + ++ + NLLG C +
Sbjct: 43 VIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK 102
Query: 125 GDE-RLLVAEYMPNETLAKHL----------FHWETHPMKWAMRLRVVLH----LAQALE 169
+++ E+ L+ +L K + L ++ +A+ +E
Sbjct: 103 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGME 162
Query: 170 YCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF----TPPE 222
+ S+ H DL A IL E ++ FGL ++ Y + PE
Sbjct: 163 FLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 220
Query: 223 YLRTGRVTPESVIYSFGTLLLDLLSGKHIP------PSHALDLIRDRNLQMLTDSCLEGQ 276
+ T +S ++SFG LL ++ S P +++ D
Sbjct: 221 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP-- 278
Query: 277 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 318
E+ + C EP +RP LV L L +
Sbjct: 279 -------EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 3e-08
Identities = 45/249 (18%), Positives = 83/249 (33%), Gaps = 30/249 (12%)
Query: 73 VYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131
V++ K + + AVK+ + R EE + L + R+ L G EG +
Sbjct: 74 VHRMKDKQTGFQCAVKK---VRLEVFRV--EELVACAGLSSPRIVPLYGAVREGPWVNIF 128
Query: 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 191
E + +L + + + L + + LEY ++ L+ D+ A +L
Sbjct: 129 MELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRR-ILHGDVKADNVLLSS 185
Query: 192 DGNP-RLSTFGLMKNSRDGKSYSTNLAF-----TP----PEYLRTGRVTPESVIYSFGTL 241
DG+ L FG + + L T PE + + I+S +
Sbjct: 186 DGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCM 245
Query: 242 LLDLLSGKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 297
+L +L+G H I ++ + + L+ EP
Sbjct: 246 MLHMLNGCHPWTQYFRGPLCLKIA-------SEPPPIREIPPSCAPLTAQAIQEGLRKEP 298
Query: 298 RERPNPKSL 306
R + L
Sbjct: 299 VHRASAMEL 307
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 3e-08
Identities = 54/293 (18%), Positives = 97/293 (33%), Gaps = 49/293 (16%)
Query: 73 VYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL-- 129
V K + + R A+K+ R L E + L + + E +
Sbjct: 22 VVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKP 80
Query: 130 -----------LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRAL 178
+ EY N TL + + + R+ + +AL Y S+G +
Sbjct: 81 MTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW-RLFRQILEALSYIHSQG--I 137
Query: 179 YH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF--------------TP--- 220
H DL I DE N ++ FGL KN + T
Sbjct: 138 IHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYV 197
Query: 221 -PEYLR-TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 278
E L TG + +YS G + +++ P S ++ + F
Sbjct: 198 ATEVLDGTGHYNEKIDMYSLGIIFFEMIY----PFSTGMERVNILKKLRSVSIEFPPDFD 253
Query: 279 DDDGTELVRLASRCLQYEPRERPNPKSLVTALS----PLQKETEVPSHVLMGI 327
D+ ++ + ++P +RP ++L L+ P++ + EV L +
Sbjct: 254 DNKMKVEKKIIRLLIDHDPNKRPGARTL---LNSGWLPVKHQDEVIKEALKSL 303
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
Score = 54.4 bits (131), Expect = 5e-08
Identities = 21/105 (20%), Positives = 42/105 (40%), Gaps = 6/105 (5%)
Query: 386 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP--TVYARRSLCYLMSDMPQDALNDAMQA 443
K KG+ FR K DAI+ Y ++ + Y+ S CY+ + + + +A
Sbjct: 10 KDKGNQFFRNKKYDDAIKYYNWALE----LKEDPVFYSNLSACYVSVGDLKKVVEMSTKA 65
Query: 444 QIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488
+ P + +A+A +G +A L + +++
Sbjct: 66 LELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFNDASI 110
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 5e-08
Identities = 38/146 (26%), Positives = 61/146 (41%), Gaps = 19/146 (13%)
Query: 164 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST---NLAFT 219
+ A++YC K + H DL A +L D D N +++ FG G +
Sbjct: 123 IVSAVQYCHQKR--IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYA 180
Query: 220 PPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 277
PE + G+ PE ++S G +L L+SG +P +NL+ L + L G++
Sbjct: 181 APELFQ-GKKYDGPEVDVWSLGVILYTLVSG-SLP-------FDGQNLKELRERVLRGKY 231
Query: 278 TDDDG--TELVRLASRCLQYEPRERP 301
T+ L R L P +R
Sbjct: 232 RIPFYMSTDCENLLKRFLVLNPIKRG 257
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 6e-08
Identities = 56/287 (19%), Positives = 97/287 (33%), Gaps = 51/287 (17%)
Query: 73 VYKGKL------ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNN-RLTNLLGCCCE 124
V ++AVK A + + E + + QL ++ + NLLG C
Sbjct: 61 VMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL 120
Query: 125 GDERLLVAEYMPN-----------ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT- 172
L+ EY E ++ +E VL L +
Sbjct: 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQ 180
Query: 173 -SKGRALY-------H-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF--- 218
+KG + H DL A +L ++ FGL ++ +Y N
Sbjct: 181 VAKGME-FLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVK 239
Query: 219 -TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP------PSHALDLIRDRNLQMLTDS 271
PE L G T +S ++S+G LL ++ S P ++ LI++
Sbjct: 240 WMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFY 299
Query: 272 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 318
E E+ + C ++ R+RP+ +L + L + E
Sbjct: 300 ATE---------EIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 1e-07
Identities = 40/160 (25%), Positives = 63/160 (39%), Gaps = 19/160 (11%)
Query: 158 LRVVLHLAQALEYCTSKGRALYH----DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS 213
LRV+ L AL+ C + + DL + D N +L FGL + S++
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA 173
Query: 214 TNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 269
TP PE + +S I+S G LL +L + PP A + + L
Sbjct: 174 KTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM--PPFTA------FSQKELA 225
Query: 270 DSCLEGQFT---DDDGTELVRLASRCLQYEPRERPNPKSL 306
EG+F EL + +R L + RP+ + +
Sbjct: 226 GKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEI 265
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 1e-07
Identities = 44/253 (17%), Positives = 91/253 (35%), Gaps = 33/253 (13%)
Query: 72 VVYKGKLENQRRIAVKR--FNRMAWPDPRQFLEEARSVGQLR--NNRLTNLLGCCCEGDE 127
V++ E ++ A+K + E + +L+ ++++ L
Sbjct: 43 KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 102
Query: 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYR 186
+V E + L L ++ ++ +A+ G + H DL
Sbjct: 103 IYMVMECGNID-LNSWLKKKKSIDPWERKS--YWKNMLEAVHTIHQHG--IVHSDLKPAN 157
Query: 187 ILFDEDGNPRLSTFGLMKNSRDGKS--YSTNLAFTP----PEYLR-----------TGRV 229
L DG +L FG+ + + + T PE ++ ++
Sbjct: 158 FLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKI 216
Query: 230 TPESVIYSFGTLLLDLLSGKHIPP-SHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 288
+P+S ++S G +L + GK P ++ I L + D E +F D +L +
Sbjct: 217 SPKSDVWSLGCILYYMTYGK--TPFQQIINQIS--KLHAIIDPNHEIEFPDIPEKDLQDV 272
Query: 289 ASRCLQYEPRERP 301
CL+ +P++R
Sbjct: 273 LKCCLKRDPKQRI 285
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 1e-07
Identities = 46/271 (16%), Positives = 81/271 (29%), Gaps = 34/271 (12%)
Query: 59 ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNL 118
IV K + E P + + ++ N
Sbjct: 64 PGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNT 123
Query: 119 LGCCCEGDERLL---VAEYMPNETLAKHLFHWETH-PMKWAMRLRVVLHLAQALEYCTSK 174
+G ++ + E L + + + + L + + +A+A+E+ SK
Sbjct: 124 VGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK 183
Query: 175 GRALYHDL---NAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV-T 230
G ++ DL N I F D ++ FGL+ + T L P TG+V T
Sbjct: 184 G-LMHRDLKPSN---IFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT 239
Query: 231 P---------------ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 275
+ I+S G +L +LL + RNL+
Sbjct: 240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPLLF---- 295
Query: 276 QFTDDDGTELVRLASRCLQYEPRERPNPKSL 306
+ + L P ERP +
Sbjct: 296 ---TQKYPQEHMMVQDMLSPSPTERPEATDI 323
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} Length = 127 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 1e-07
Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 1/91 (1%)
Query: 386 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 445
K G+ A++QKD + A Y + I+ + T Y ++ Y + + +A
Sbjct: 12 KDLGNAAYKQKDFEKAHVHYDKAIELDPS-NITFYNNKAAVYFEEKKFAECVQFCEKAVE 70
Query: 446 ISPIWHIASYLQAAALSAMGMENEAQVALKE 476
+ L A A+S G + Q L
Sbjct: 71 VGRETRADYKLIAKAMSRAGNAFQKQNDLSL 101
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 2e-07
Identities = 41/191 (21%), Positives = 71/191 (37%), Gaps = 16/191 (8%)
Query: 73 VYKGK-LENQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLRNNRLTNLLGCCCEGDER 128
VY+ + +R +A+K + DP + EAR+ G+L+ + + +
Sbjct: 50 VYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQL 109
Query: 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRI 187
+ + LA L P+ + +V + AL+ + G H D+ I
Sbjct: 110 YVDMRLINGVDLAAMLR--RQGPLAPPRAVAIVRQIGSALDAAHAAG--ATHRDVKPENI 165
Query: 188 LFDEDGNPRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLL 242
L D L FG+ + D K L + PE T + IY+ +L
Sbjct: 166 LVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVL 225
Query: 243 LDLLSGKHIPP 253
+ L+G PP
Sbjct: 226 YECLTGS--PP 234
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 2e-07
Identities = 34/176 (19%), Positives = 61/176 (34%), Gaps = 17/176 (9%)
Query: 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRIL 188
L+ E+ P L K L + + + LA AL YC + + H D+ +L
Sbjct: 91 LMLEFAPRGELYKELQKHGRFDEQRSATF--MEELADALHYCHERK--VIHRDIKPENLL 146
Query: 189 FDEDGNPRLSTFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 246
G +++ FG ++ + + L + PPE + + ++ G L + L
Sbjct: 147 MGYKGELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFL 206
Query: 247 SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT--DDDGTELVRLASRCLQYEPRER 300
G PP + + L S+ L+Y P +R
Sbjct: 207 VGM--PPFD------SPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQR 254
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 2e-07
Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 1/99 (1%)
Query: 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDAL 437
+ E + + AF D AI + ++ + R+ C++ P+ A+
Sbjct: 139 KSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVW-DAELRELRAECFIKEGEPRKAI 197
Query: 438 NDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 476
+D A + A Y + +G + ++E
Sbjct: 198 SDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRE 236
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 7e-06
Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 1/91 (1%)
Query: 386 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 445
+ G L DA+ + +D + Y RR+ +L + AL D +
Sbjct: 30 LELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIQ 88
Query: 446 ISPIWHIASYLQAAALSAMGMENEAQVALKE 476
+ + A + L G +EA+ K+
Sbjct: 89 LKMDFTAARLQRGHLLLKQGKLDEAEDDFKK 119
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 3e-04
Identities = 16/102 (15%), Positives = 33/102 (32%), Gaps = 3/102 (2%)
Query: 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFID---AGTMVSPTVYARRSLCYLMSDMPQ 434
Q+++ + + R DA Y + + + R C+ + P
Sbjct: 253 QVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPV 312
Query: 435 DALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 476
+A+ + + P A +A A M +EA +
Sbjct: 313 EAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYET 354
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 3e-07
Identities = 50/282 (17%), Positives = 91/282 (32%), Gaps = 46/282 (16%)
Query: 73 VYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNR-LTNLLGCCCEGDER-- 128
VY+ + + + R A+KR R ++E + +L + + G E
Sbjct: 44 VYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD 103
Query: 129 ------LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-D 181
LL+ E + + P+ L++ +A+++ + + H D
Sbjct: 104 TGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRD 163
Query: 182 LNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF------------TP----PEYLR 225
L +L G +L FG YS + TP PE +
Sbjct: 164 LKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIID 223
Query: 226 TGR---VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT---- 278
+ + I++ G +L L +H P +R + G+++
Sbjct: 224 LYSNFPIGEKQDIWALGCILYLLCFRQH--PFEDGAKLR----------IVNGKYSIPPH 271
Query: 279 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVP 320
D T L LQ P ER + +V L + V
Sbjct: 272 DTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVN 313
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 3e-07
Identities = 42/176 (23%), Positives = 66/176 (37%), Gaps = 17/176 (9%)
Query: 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRIL 188
L+ EY P T+ + L + + LA AL YC SK + H D+ +L
Sbjct: 86 LILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSKR--VIHRDIKPENLL 141
Query: 189 FDEDGNPRLSTFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 246
G +++ FG ++ + L + PPE + + ++S G L + L
Sbjct: 142 LGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL 201
Query: 247 SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT--DDDGTELVRLASRCLQYEPRER 300
GK PP Q +FT D L SR L++ P +R
Sbjct: 202 VGK--PP------FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 249
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 3e-07
Identities = 63/276 (22%), Positives = 100/276 (36%), Gaps = 49/276 (17%)
Query: 66 GEKAPNVVYKGK-LENQRRIAVKRFN-RMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCC 123
G A VV + ++A+KR N + L+E +++ Q + + +
Sbjct: 24 GSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFV 83
Query: 124 EGDERLLVAEYMPN---ETLAKHLFHWETHPMKW------AMRLRVVLHLAQALEYCTSK 174
DE LV + + + KH+ H A LR VL + LEY
Sbjct: 84 VKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL---EGLEYLHKN 140
Query: 175 GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVT---- 230
G+ ++ D+ A IL EDG+ +++ FG S LA R T
Sbjct: 141 GQ-IHRDVKAGNILLGEDGSVQIADFG----------VSAFLATGGDITRNKVRKTFVGT 189
Query: 231 -----PESV-----------IYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLTD 270
PE + I+SFG ++L +G PP L L + L
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET 249
Query: 271 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 306
+ + G ++ S CLQ +P +RP L
Sbjct: 250 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL 285
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A Length = 131 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 4e-07
Identities = 14/91 (15%), Positives = 32/91 (35%), Gaps = 1/91 (1%)
Query: 386 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 445
K+ G+ A+++KD A++ Y + + + T ++ Y +A
Sbjct: 8 KELGNDAYKKKDFDTALKHYDKAKELDP-TNMTYITNQAAVYFEKGDYNKCRELCEKAIE 66
Query: 446 ISPIWHIASYLQAAALSAMGMENEAQVALKE 476
+ A A + +G + K+
Sbjct: 67 VGRENREDYRQIAKAYARIGNSYFKEEKYKD 97
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 5e-07
Identities = 52/272 (19%), Positives = 87/272 (31%), Gaps = 56/272 (20%)
Query: 72 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARS-VGQLRNNRLT---NL--LGCCCEG 125
VV++G + + AVKR F + A + L N+ C
Sbjct: 31 VVFQGSFQGRPV-AVKRMLI-------DFCDIALMEIKLLT--ESDDHPNVIRYYCSETT 80
Query: 126 DERL-LVAEYMPNE----TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180
D L + E +K++ K + ++ +A + + S + H
Sbjct: 81 DRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK--IIH 138
Query: 181 -DLNAYRILFD-------------EDGNPRLSTFGLMKNSRDGKSYSTNLAFTP------ 220
DL IL E+ +S FGL K G+S P
Sbjct: 139 RDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGW 198
Query: 221 --PEYLR-------TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM--LT 269
PE L R+T I+S G + +LS P R+ N+ +
Sbjct: 199 RAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD--KYSRESNIIRGIFS 256
Query: 270 DSCLEGQFTDDDGTELVRLASRCLQYEPRERP 301
++ E L S+ + ++P +RP
Sbjct: 257 LDEMKCLHDRSLIAEATDLISQMIDHDPLKRP 288
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.4 bits (122), Expect = 5e-07
Identities = 94/623 (15%), Positives = 178/623 (28%), Gaps = 217/623 (34%)
Query: 26 DVENDEM--SEVDGLPSFRE-F--------TLEQLKNATSGFAVENIVSEHGEKAPNVVY 74
D E E D L F + F + K+ S +++I+ + + V
Sbjct: 8 DFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHII-----MSKDAVS 62
Query: 75 K-----GKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 129
L +++ V++F +FL Q + + +T + E +RL
Sbjct: 63 GTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMY---IEQRDRL 119
Query: 130 LVAEYMPNETLAKHLFHWETHPM----KWAMRLR----VVLH---------LAQALEYCT 172
Y N+ AK+ P + + LR V++ +A L+ C
Sbjct: 120 ----YNDNQVFAKY-NVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVA--LDVCL 172
Query: 173 SKGRALYHDLNAYRILFDEDGNPR-----LSTF--GLMKNSRDGKSYSTNLAFTPPE--- 222
S D + + +P L + N +S+N+
Sbjct: 173 SYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA 232
Query: 223 YLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-----LI--RDRNL------Q 266
LR + ++ +LL++ + K +A + L+ R + +
Sbjct: 233 ELRRLLKSKPYENCLL-----VLLNVQNAKAW---NAFNLSCKILLTTRFKQVTDFLSAA 284
Query: 267 MLTDSCLEGQ---FTDDDGTELVRLASRCLQYEPRERP------NP-------------- 303
T L+ T D+ L+ + L P++ P NP
Sbjct: 285 TTTHISLDHHSMTLTPDEVKSLL---LKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGL 341
Query: 304 ------------------KSLVTALSP------------LQKETEVPSHVL--------- 324
+S + L P +P+ +L
Sbjct: 342 ATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIK 401
Query: 325 ------MGIPHSASVSPLSP-----------LGEACSRRDLTAIH-EILEKISYKDDEGV 366
+ H S+ P L + A+H I++ Y +
Sbjct: 402 SDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDH--YNIPKTF 459
Query: 367 ANELSFQMWTDQ---------MQETLNSKKKG-------DVAF-RQK------------- 396
++ + DQ ++ + ++ D F QK
Sbjct: 460 DSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGS 519
Query: 397 ---DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISP---IW 450
L+ ++ Y +I P Y R + ++ +P+ N I S +
Sbjct: 520 ILNTLQQ-LKFYKPYI---CDNDPK-YERL-VNAILDFLPKIEEN-----LICSKYTDLL 568
Query: 451 HIASYLQAAALSAMGMENEAQVA 473
IA L A A+ E QV
Sbjct: 569 RIA--LMAED-EAIFEEAHKQVQ 588
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 6e-07
Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 1/99 (1%)
Query: 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDAL 437
+ E + + AF D AI + ++ + R+ C++ P+ A+
Sbjct: 116 KADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVW-DAELRELRAECFIKEGEPRKAI 174
Query: 438 NDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 476
+D A + A Y + +G + ++E
Sbjct: 175 SDLKAASKLKSDNTEAFYKISTLYYQLGDHELSLSEVRE 213
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 7e-05
Identities = 19/94 (20%), Positives = 33/94 (35%), Gaps = 7/94 (7%)
Query: 386 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT---VYARRSLCYLMSDMPQDALNDAMQ 442
+ G L DA+ + +D P Y RR+ +L + AL D +
Sbjct: 7 LELGKKLLAAGQLADALSQFHAAVDG----DPDNYIAYYRRATVFLAMGKSKAALPDLTK 62
Query: 443 AQIISPIWHIASYLQAAALSAMGMENEAQVALKE 476
+ + A + L G +EA+ K+
Sbjct: 63 VIALKMDFTAARLQRGHLLLKQGKLDEAEDDFKK 96
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 1e-04
Identities = 16/96 (16%), Positives = 32/96 (33%), Gaps = 3/96 (3%)
Query: 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFID---AGTMVSPTVYARRSLCYLMSDMPQ 434
Q+++ + + R DA Y + + + R C+ + P
Sbjct: 230 QVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEKPV 289
Query: 435 DALNDAMQAQIISPIWHIASYLQAAALSAMGMENEA 470
+A+ + + P A +A A M +EA
Sbjct: 290 EAIRICSEVLQMEPDNVNALKDRAEAYLIEEMYDEA 325
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 7e-07
Identities = 44/253 (17%), Positives = 91/253 (35%), Gaps = 33/253 (13%)
Query: 72 VVYKGKLENQRRIAVKR--FNRMAWPDPRQFLEEARSVGQLR--NNRLTNLLGCCCEGDE 127
V++ E ++ A+K + E + +L+ ++++ L
Sbjct: 24 KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 83
Query: 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYR 186
+V E + L L ++ ++ +A+ G + H DL
Sbjct: 84 IYMVMECGNID-LNSWLKKKKSIDPWERKS--YWKNMLEAVHTIHQHG--IVHSDLKPAN 138
Query: 187 ILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF--TP----PEYLR-----------TGRV 229
L DG +L FG+ + + + T PE ++ ++
Sbjct: 139 FLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKI 197
Query: 230 TPESVIYSFGTLLLDLLSGKHIPP-SHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 288
+P+S ++S G +L + GK P ++ I L + D E +F D +L +
Sbjct: 198 SPKSDVWSLGCILYYMTYGK--TPFQQIINQIS--KLHAIIDPNHEIEFPDIPEKDLQDV 253
Query: 289 ASRCLQYEPRERP 301
CL+ +P++R
Sbjct: 254 LKCCLKRDPKQRI 266
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 7e-07
Identities = 47/201 (23%), Positives = 78/201 (38%), Gaps = 30/201 (14%)
Query: 73 VYKGK-LENQRRIAVK----RFNRMAWPDP---RQFLEEARSVGQLRNNRLTNLL--GCC 122
V+ + L + R +AVK R DP +F EA++ L + + + G
Sbjct: 28 VHLARDLRDHRDVAVKVLRADLAR----DPSFYLRFRREAQNAAALNHPAIVAVYDTGEA 83
Query: 123 CEGDERL--LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180
L +V EY+ TL + PM + V+ QAL + G + H
Sbjct: 84 ETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQNG--IIH 139
Query: 181 -DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVTPE 232
D+ I+ ++ FG+ + D + T + PE R V
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 233 SVIYSFGTLLLDLLSGKHIPP 253
S +YS G +L ++L+G+ PP
Sbjct: 200 SDVYSLGCVLYEVLTGE--PP 218
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 49.8 bits (119), Expect = 1e-06
Identities = 44/253 (17%), Positives = 91/253 (35%), Gaps = 33/253 (13%)
Query: 72 VVYKGKLENQRRIAVKRFNR--MAWPDPRQFLEEARSVGQLR--NNRLTNLLGCCCEGDE 127
V++ E ++ A+K N + E + +L+ ++++ L
Sbjct: 71 KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 130
Query: 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYR 186
+V E + L L ++ ++ +A+ G + H DL
Sbjct: 131 IYMVMECGNID-LNSWLKKKKSIDPWERKS--YWKNMLEAVHTIHQHG--IVHSDLKPAN 185
Query: 187 ILFDEDGNPRLSTFGLMKNSRDGKS--YSTNLAFTP----PEYLR-----------TGRV 229
L DG +L FG+ + + + PE ++ ++
Sbjct: 186 FLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKI 244
Query: 230 TPESVIYSFGTLLLDLLSGKHIPP-SHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 288
+P+S ++S G +L + GK P ++ I L + D E +F D +L +
Sbjct: 245 SPKSDVWSLGCILYYMTYGK--TPFQQIINQIS--KLHAIIDPNHEIEFPDIPEKDLQDV 300
Query: 289 ASRCLQYEPRERP 301
CL+ +P++R
Sbjct: 301 LKCCLKRDPKQRI 313
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 1e-06
Identities = 32/182 (17%), Positives = 66/182 (36%), Gaps = 18/182 (9%)
Query: 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRIL 188
+ E+ TL + + + + L + + + ++Y SK L + DL I
Sbjct: 97 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK--LINRDLKPSNIF 154
Query: 189 FDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLD 244
+ ++ FGL+ + ++ + + T PE + + E +Y+ G +L +
Sbjct: 155 LVDTKQVKIGDFGLVTSLKNDGKRTRSKG-TLRYMSPEQISSQDYGKEVDLYALGLILAE 213
Query: 245 LLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 304
LL D +G +D + L + L +P +RPN
Sbjct: 214 LLHVCD-TAFETSKFFTD---------LRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTS 263
Query: 305 SL 306
+
Sbjct: 264 EI 265
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 1e-06
Identities = 47/283 (16%), Positives = 90/283 (31%), Gaps = 41/283 (14%)
Query: 73 VYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE----GDE 127
V + L + A+KR D + EA + + L+ C E
Sbjct: 45 VDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE 104
Query: 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRALYH-DLNA 184
L+ + TL + + L ++L + + LE +KG H DL
Sbjct: 105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG--YAHRDLKP 162
Query: 185 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTG----------------R 228
IL ++G P L G M + S +
Sbjct: 163 TNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCV 222
Query: 229 VTPESVIYSFGTLLLDLLSGKH-----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 283
+ + ++S G +L ++ G+ ++ L L + +
Sbjct: 223 IDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRH--------SS 274
Query: 284 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKET--EVPSHVL 324
L +L + + +P +RP+ L++ L LQ + + +L
Sbjct: 275 ALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQHTTQIL 317
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 48.8 bits (116), Expect = 2e-06
Identities = 29/266 (10%), Positives = 67/266 (25%), Gaps = 47/266 (17%)
Query: 72 VVYKGK------LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTN---LLGCC 122
VY+ +N+++ +K +P +F + + +L+ +
Sbjct: 80 QVYEATQGDLNDAKNKQKFVLKVQKP---ANPWEFYIGTQLMERLKPSMQHMFMKFYSAH 136
Query: 123 CEGDERLLVAEYMPNETL---AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA-- 177
+ +LV E TL + M + + + + +E
Sbjct: 137 LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHG 196
Query: 178 --------LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEY-- 223
L + D L G S D K + FT +
Sbjct: 197 DIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQ---SIDMKLFPKGTIFTAKCETSGFQC 253
Query: 224 --LRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 280
+ + + + + + +L G ++ +++ + + D
Sbjct: 254 VEMLSNKPWNYQIDYFGVAATVYCMLFGTYMK-------VKNEGGECKPEGLFRRLPHLD 306
Query: 281 DGTELVRLASRCLQYEPRERPNPKSL 306
E L L
Sbjct: 307 MWNEFFH---VMLNIPDCHHLPSLDL 329
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 3e-06
Identities = 42/265 (15%), Positives = 78/265 (29%), Gaps = 43/265 (16%)
Query: 72 VVYKG-KLENQRRIAVKRFNRMAWPDP--RQFLEEARSVGQLRNNR-LTNLLGCCCEGDE 127
V+K K + A+KR + + L E + L + + E D
Sbjct: 26 SVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDH 85
Query: 128 RLLVAEYMPNETLAKHL--FHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNA 184
L+ EY +LA + + K A ++L + + L Y S L H D+
Sbjct: 86 MLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS--LVHMDIKP 143
Query: 185 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA-F--------------TP----PEYLR 225
I P ++ ++ + E L+
Sbjct: 144 SNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQ 203
Query: 226 -TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL---IRDRNLQMLTDSCLEGQFTDDD 281
P++ I++ ++ + P D IR L + +
Sbjct: 204 ENYTHLPKADIFALALTVVCAAGAE--PLPRNGDQWHEIRQGRL-----PRIPQVLSQ-- 254
Query: 282 GTELVRLASRCLQYEPRERPNPKSL 306
E L + +P RP+ +L
Sbjct: 255 --EFTELLKVMIHPDPERRPSAMAL 277
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 5e-06
Identities = 37/173 (21%), Positives = 61/173 (35%), Gaps = 41/173 (23%)
Query: 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFD-EDGN 194
E ++ F + A+++C S+G + H D+ IL D G
Sbjct: 137 GEGPSRCFFG----------------QVVAAIQHCHSRG--VVHRDIKDENILIDLRRGC 178
Query: 195 PRLSTFGLMKNSRDGKSYST---NLAFTPPEYLRTGRVT-PESVIYSFGTLLLDLLSGKH 250
+L FG D Y+ ++PPE++ + + ++S G LL D++ G
Sbjct: 179 AKLIDFGSGALLHDEP-YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDI 237
Query: 251 IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG--TELVRLASRCLQYEPRERP 301
P I LE + + L RCL +P RP
Sbjct: 238 --PFERDQEI------------LEAELHFPAHVSPDCCALIRRCLAPKPSSRP 276
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 6e-06
Identities = 46/214 (21%), Positives = 80/214 (37%), Gaps = 35/214 (16%)
Query: 105 RSVGQLRNNRLTNLLGCCCEGDERL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLH 163
+ + + N+R L E + L LV M L H++H A R V +
Sbjct: 235 KQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA---RAVFY 291
Query: 164 LAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF-- 218
A+ LE + +Y DL IL D+ G+ R+S GL + +G++
Sbjct: 292 AAEICCGLEDLHRER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG---RVG 347
Query: 219 TPPEYLRTGRVTPESVIY----------SFGTLLLDLLSGKHIPPSHALDLIRDRNLQML 268
T Y+ PE V + G LL ++++G+ P + + +
Sbjct: 348 T-VGYM-----APEVVKNERYTFSPDWWALGCLLYEMIAGQ--SPFQQRK--KKIKREEV 397
Query: 269 TDSCLEGQ--FTDDDGTELVRLASRCLQYEPRER 300
E +++ + L S+ L +P ER
Sbjct: 398 ERLVKEVPEEYSERFSPQARSLCSQLLCKDPAER 431
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Length = 537 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 6e-06
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Query: 386 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 445
K +G+ F K+ +AI+ Y I+ P Y+ S CY+ + + + +A
Sbjct: 29 KNRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALE 87
Query: 446 ISPIWHIASYLQAAALSAMGMENEAQVALK 475
I P A +A+A ++G +A L
Sbjct: 88 IKPDHSKALLRRASANESLGNFTDAMFDLS 117
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 6e-06
Identities = 42/193 (21%), Positives = 66/193 (34%), Gaps = 24/193 (12%)
Query: 119 LGCCCEGDERL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQ---ALEYCTSK 174
+ ++L + + M L HL + + A+ LE+ ++
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-----DMRFYAAEIILGLEHMHNR 311
Query: 175 GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVT 230
+Y DL IL DE G+ R+S GL + K ++ T PE L+ G
Sbjct: 312 F-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA--SVGTHGYMAPEVLQKGVAY 368
Query: 231 PESVIY-SFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ--FTDDDGTELVR 287
S + S G +L LL G P ++ + L D EL
Sbjct: 369 DSSADWFSLGCMLFKLLRGH--SPFRQHK---TKDKHEIDRMTLTMAVELPDSFSPELRS 423
Query: 288 LASRCLQYEPRER 300
L LQ + R
Sbjct: 424 LLEGLLQRDVNRR 436
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 6e-06
Identities = 40/173 (23%), Positives = 65/173 (37%), Gaps = 41/173 (23%)
Query: 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDED-GN 194
E LA+ F + +A+ +C + G + H D+ IL D + G
Sbjct: 147 QEELARSFFW----------------QVLEAVRHCHNCG--VLHRDIKDENILIDLNRGE 188
Query: 195 PRLSTFGLMKNSRDGKSYST---NLAFTPPEYLRTGRVT-PESVIYSFGTLLLDLLSGKH 250
+L FG +D Y+ ++PPE++R R + ++S G LL D++ G
Sbjct: 189 LKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 247
Query: 251 IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG--TELVRLASRCLQYEPRERP 301
P + I + GQ +E L CL P +RP
Sbjct: 248 --PFEHDEEI------------IRGQVFFRQRVSSECQHLIRWCLALRPSDRP 286
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 7e-06
Identities = 36/148 (24%), Positives = 58/148 (39%), Gaps = 21/148 (14%)
Query: 164 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGL---MKNSRDGKSYSTNL--- 216
L LEY S+G + H D+ +L G ++S G+ + + T+
Sbjct: 118 LIDGLEYLHSQG--IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSP 175
Query: 217 AFTPPEYLRTGRV--TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE 274
AF PPE + I+S G L ++ +G P N+ L ++ +
Sbjct: 176 AFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG-LYP-------FEGDNIYKLFENIGK 227
Query: 275 GQFT--DDDGTELVRLASRCLQYEPRER 300
G + D G L L L+YEP +R
Sbjct: 228 GSYAIPGDCGPPLSDLLKGMLEYEPAKR 255
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 9e-06
Identities = 36/160 (22%), Positives = 58/160 (36%), Gaps = 32/160 (20%)
Query: 159 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 214
R++ + + Y + H DL +L +D N R+ FGL + K
Sbjct: 130 RIIRQVLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD 187
Query: 215 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 270
T PE L G + ++S G +L LLSG PP + N +
Sbjct: 188 -KIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGC--PPFN------GANEYDILK 237
Query: 271 SCLEGQFT---------DDDGTELVRLASRCLQYEPRERP 301
+G++T + +L+R + L Y P R
Sbjct: 238 KVEKGKYTFELPQWKKVSESAKDLIR---KMLTYVPSMRI 274
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 9e-06
Identities = 34/179 (18%), Positives = 62/179 (34%), Gaps = 18/179 (10%)
Query: 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRIL 188
LV E N + ++L P + + + Y S G + H DL +L
Sbjct: 88 LVLEMCHNGEMNRYL-KNRVKPFSENEARHFMHQIITGMLYLHSHG--ILHRDLTLSNLL 144
Query: 189 FDEDGNPRLSTFGL-MKNSRDGKSYSTN---LAFTPPEYLRTGRVTPESVIYSFGTLLLD 244
+ N +++ FGL + + + T + PE ES ++S G +
Sbjct: 145 LTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYT 204
Query: 245 LLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT--DDDGTELVRLASRCLQYEPRERP 301
LL G+ PP ++ + + + E L + L+ P +R
Sbjct: 205 LLIGR--PPFD------TDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQLLRRNPADRL 255
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 1e-05
Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 17/151 (11%)
Query: 164 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTN---LAF 218
+ +Y + H DL + +ED ++ FGL K DG+ +
Sbjct: 124 IVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNY 181
Query: 219 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 278
PE L + E ++S G ++ LL GK PP L+ + +++
Sbjct: 182 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK--PPFE------TSCLKETYLRIKKNEYS 233
Query: 279 --DDDGTELVRLASRCLQYEPRERPNPKSLV 307
L + LQ +P RP L+
Sbjct: 234 IPKHINPVAASLIQKMLQTDPTARPTINELL 264
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 1e-05
Identities = 46/275 (16%), Positives = 76/275 (27%), Gaps = 29/275 (10%)
Query: 65 HGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPR--QFLEEARSVGQLRNNRLTNLLGC 121
G + V + + V+R N A + E + +
Sbjct: 35 KGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRAT 94
Query: 122 CCEGDERLLVAEYMPNETLAKHLFHWETHPMK---WAMRLRVVLHLAQALEYCTSKGRAL 178
+E +V +M + + M A L+ VL +AL+Y G
Sbjct: 95 FIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVL---KALDYIHHMGYV- 150
Query: 179 YH-DLNAYRILFDEDGNPRLSTFGL-------MKNSRDGKSYSTNLAFTP----PEYLRT 226
H + A IL DG LS + R + PE L+
Sbjct: 151 -HRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQ 209
Query: 227 GRV--TPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 280
+S IYS G +L +G +P + L + + L D+
Sbjct: 210 NLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELT 269
Query: 281 DGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315
S P P + + P +
Sbjct: 270 MSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHR 304
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 1e-05
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 20/138 (14%)
Query: 130 LVAEYMPNETLAKHLFHWETHPMKWAMRL------RVVLHLAQALEYCTSKGRALYH-DL 182
++ EYM N+++ K ++ + + ++ + + Y ++ + + H D+
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE-KNICHRDV 178
Query: 183 ---NAYRILFDEDGNPRLSTFGLMKNSRDGKSYST--NLAFTPPEYL--RTGRVTPESVI 235
N IL D++G +LS FG + D K + F PPE+ + + I
Sbjct: 179 KPSN---ILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDI 235
Query: 236 YSFGTLLLDLLSGKHIPP 253
+S G L + P
Sbjct: 236 WSLGICLYVMFYNV--VP 251
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 1e-05
Identities = 30/160 (18%), Positives = 60/160 (37%), Gaps = 32/160 (20%)
Query: 159 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 214
++ + + Y + H DL +L ++D ++ FGL + K
Sbjct: 140 VIIKQVLSGVTYLHKHN--IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKE 197
Query: 215 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 270
T PE LR + + ++S G +L LL+G PP + Q +
Sbjct: 198 -RLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGY--PP------FGGQTDQEILR 247
Query: 271 SCLEGQFT---------DDDGTELVRLASRCLQYEPRERP 301
+G++T + +L++ + LQ++ + R
Sbjct: 248 KVEKGKYTFDSPEWKNVSEGAKDLIK---QMLQFDSQRRI 284
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 1e-05
Identities = 29/160 (18%), Positives = 55/160 (34%), Gaps = 32/160 (20%)
Query: 159 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 214
++ + + Y + H D+ IL + N ++ FGL
Sbjct: 150 NIMKQILSGICYLHKHN--IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRD 207
Query: 215 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 270
T PE L+ + + ++S G ++ LL G PP +N Q +
Sbjct: 208 -RLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGY--PPFGG------QNDQDIIK 257
Query: 271 SCLEGQFT---------DDDGTELVRLASRCLQYEPRERP 301
+G++ D+ EL++ L Y+ +R
Sbjct: 258 KVEKGKYYFDFNDWKNISDEAKELIK---LMLTYDYNKRC 294
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 2e-05
Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 17/151 (11%)
Query: 164 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYST---NLAF 218
+ +Y + H DL + +ED ++ FGL K DG+ +
Sbjct: 150 IVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNY 207
Query: 219 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 278
PE L + E ++S G ++ LL GK PP L+ + +++
Sbjct: 208 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK--PPFE------TSCLKETYLRIKKNEYS 259
Query: 279 --DDDGTELVRLASRCLQYEPRERPNPKSLV 307
L + LQ +P RP L+
Sbjct: 260 IPKHINPVAASLIQKMLQTDPTARPTINELL 290
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 Length = 198 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 2e-05
Identities = 22/141 (15%), Positives = 53/141 (37%), Gaps = 18/141 (12%)
Query: 356 EKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQ-------- 407
E + ++ + + + + +++Q + K++G+ F++ ++ +AI Y +
Sbjct: 15 ENLYFQGAKKSIYDYTDE---EKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHT 71
Query: 408 -------FIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 460
+D + + + CY + A++ A + I A Y A
Sbjct: 72 EEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVA 131
Query: 461 LSAMGMENEAQVALKEGTTLE 481
G EA+ L + +L
Sbjct: 132 NMYFGFLEEAKENLYKAASLN 152
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 2e-05
Identities = 43/213 (20%), Positives = 81/213 (38%), Gaps = 30/213 (14%)
Query: 105 RSVGQLRNNR-LTNLLGCCCEGDERL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVL 162
+ + ++R + +L E L LV M + H+++ + + R +
Sbjct: 236 KKILAKVHSRFIVSLA-YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP-RAIF 293
Query: 163 HLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 219
+ AQ LE+ + +Y DL +L D+DGN R+S GL + G++ + A T
Sbjct: 294 YTAQIVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGT 352
Query: 220 PPEYLRTGRVTPESVIY----------SFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 269
P ++ PE ++ + G L ++++ + P A + L
Sbjct: 353 -PGFM-----APELLLGEEYDFSVDYFALGVTLYEMIAAR--GPFRARG--EKVENKELK 402
Query: 270 DSCLEGQ--FTDDDGTELVRLASRCLQYEPRER 300
LE + D LQ +P +R
Sbjct: 403 QRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 2e-05
Identities = 35/165 (21%), Positives = 60/165 (36%), Gaps = 40/165 (24%)
Query: 159 RVVLHLAQALEYCTSKGRALYH-DL---NAYRILFDEDGNPRLSTFGLMKNSRDGKSYST 214
+++ L + + + H DL N IL D+D N +L+ FG G+
Sbjct: 128 KIMRALLEVICALHKLN--IVHRDLKPEN---ILLDDDMNIKLTDFGFSCQLDPGEKLRE 182
Query: 215 NLAFTP----PEYLRTGRV------TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN 264
+ TP PE + E ++S G ++ LL+G PP R
Sbjct: 183 -VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG--SPPFW------HRK 233
Query: 265 LQMLTDSCLEGQFT---------DDDGTELVRLASRCLQYEPRER 300
++ + G + D +LV R L +P++R
Sbjct: 234 QMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVS---RFLVVQPQKR 275
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 2e-05
Identities = 46/250 (18%), Positives = 95/250 (38%), Gaps = 20/250 (8%)
Query: 66 GEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 124
GE + VYK E + +A+K+ + D ++ ++E + Q + + G +
Sbjct: 38 GEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFK 95
Query: 125 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 184
+ +V EY +++ + + ++ + LEY + ++ D+ A
Sbjct: 96 NTDLWIVMEYCGAGSVSD-IIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK-IHRDIKA 153
Query: 185 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 240
IL + +G+ +L+ FG+ D + + TP PE ++ + I+S G
Sbjct: 154 GNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGI 213
Query: 241 LLLDLLSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 296
+++ GK I P A+ +I ++D +CL
Sbjct: 214 TAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKP---ELWSD----NFTDFVKQCLVKS 266
Query: 297 PRERPNPKSL 306
P +R L
Sbjct: 267 PEQRATATQL 276
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 3e-05
Identities = 41/160 (25%), Positives = 56/160 (35%), Gaps = 32/160 (20%)
Query: 159 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 214
R++ + A+ YC + H DL LF D +L FGL + GK T
Sbjct: 110 RIMKDVLSAVAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT 167
Query: 215 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 270
TP P+ L G PE +S G ++ LL G PP +
Sbjct: 168 -KVGTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGY--PPFS------APTDSEVML 217
Query: 271 SCLEGQFT---------DDDGTELVRLASRCLQYEPRERP 301
EG FT L+R R L P++R
Sbjct: 218 KIREGTFTFPEKDWLNVSPQAESLIR---RLLTKSPKQRI 254
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} Length = 258 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 3e-05
Identities = 16/103 (15%), Positives = 36/103 (34%), Gaps = 4/103 (3%)
Query: 386 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 445
K +G+ ++ + +AIE Y + + T R+ + A++ A
Sbjct: 9 KAEGNKFYKARQFDEAIEHYNKAWELHK--DITYLNNRAAAEYEKGEYETAISTLNDAVE 66
Query: 446 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488
+ + + + +G LK+ T+E + S
Sbjct: 67 QGREMRADYKVISKSFARIGNAYHKLGDLKK--TIEYYQKSLT 107
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} Length = 258 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 1e-04
Identities = 22/108 (20%), Positives = 36/108 (33%), Gaps = 16/108 (14%)
Query: 388 KGDVAFRQKDLKDAIECYTQFI-----DAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQ 442
+G F + D +A++ YT+ I DA Y+ R+ +A+ D +
Sbjct: 145 EGKEYFTKSDWPNAVKAYTEMIKRAPEDA------RGYSNRAAALAKLMSFPEAIADCNK 198
Query: 443 AQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTL-----EAKKN 485
A P + A +A A A+ A L T
Sbjct: 199 AIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSA 246
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 4e-05
Identities = 41/164 (25%), Positives = 61/164 (37%), Gaps = 34/164 (20%)
Query: 159 RVVLHLAQALEYCTSKGRALYH-DL---NAYRILF-DEDGNP---RLSTFGLMKNSRDGK 210
V+ + + +EY ++G H DL N IL+ DE GNP R+ FG K R
Sbjct: 120 AVLFTITKTVEYLHAQGVV--HRDLKPSN---ILYVDESGNPESIRICDFGFAKQLRAEN 174
Query: 211 SYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 266
+T PE L I+S G LL +L+G P D +
Sbjct: 175 GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG--YTPFANG---PDDTPE 229
Query: 267 MLTDSCLEGQFTDDDGT---------ELVRLASRCLQYEPRERP 301
+ G+F+ G +LV + L +P +R
Sbjct: 230 EILARIGSGKFSLSGGYWNSVSDTAKDLVS---KMLHVDPHQRL 270
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} Length = 162 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 4e-05
Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 17/122 (13%)
Query: 377 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQ---FIDAGTMVSP--------------TV 419
D+++ ++KG+ F QKD K+AI+ Y +D + +
Sbjct: 6 DKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPL 65
Query: 420 YARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTT 479
YA S CYL +A + + A + +A A A +EA+ LK
Sbjct: 66 YANMSQCYLNIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLR 125
Query: 480 LE 481
Sbjct: 126 NH 127
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* Length = 148 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 5e-05
Identities = 13/111 (11%), Positives = 28/111 (25%), Gaps = 2/111 (1%)
Query: 367 ANELSFQMWTDQMQETLNS-KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSL 425
+ + M + +TL ++ +DA + +
Sbjct: 5 SGGGTIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY-DSRFFLGLGA 63
Query: 426 CYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 476
C A++ ++ + A L G EA+ L
Sbjct: 64 CRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQXGELAEAESGLFL 114
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A Length = 142 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 5e-05
Identities = 12/107 (11%), Positives = 28/107 (26%), Gaps = 2/107 (1%)
Query: 371 SFQMWTDQMQETLNS-KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM 429
+ M ++TL G ++ DA + + + C
Sbjct: 6 TLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHY-DARYFLGLGACRQS 64
Query: 430 SDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 476
+ + AL ++ + A +G + A+
Sbjct: 65 LGLYEQALQSYSYGALMDINEPRFPFHAAECHLQLGDLDGAESGFYS 111
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 6e-05
Identities = 55/245 (22%), Positives = 99/245 (40%), Gaps = 23/245 (9%)
Query: 72 VVYKGK-LENQRRIAVKRFN-RMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 129
V+KG Q+ +A+K + A + +E + Q + +T G + +
Sbjct: 37 EVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLW 96
Query: 130 LVAEYMPNETLAKHLFHWETHPMKW-AMRLRVVLHLAQALEYCTSKGRALYHDLNAYRIL 188
++ EY+ + L A LR +L + L+Y S+ + ++ D+ A +L
Sbjct: 97 IIMEYLGGGSAL-DLLEPGPLDETQIATILREIL---KGLDYLHSEKK-IHRDIKAANVL 151
Query: 189 FDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLD 244
E G +L+ FG+ D + TP PE ++ ++ I+S G ++
Sbjct: 152 LSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 211
Query: 245 LLSGKHIPPSHALDLIRDRNLQMLTDS---CLEGQFTDDDGTELVRLASRCLQYEPRERP 301
L G+ PP L ++ L ++ + LEG ++ L CL EP RP
Sbjct: 212 LARGE--PPHSELHPMK--VLFLIPKNNPPTLEGNYSK----PLKEFVEACLNKEPSFRP 263
Query: 302 NPKSL 306
K L
Sbjct: 264 TAKEL 268
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 44.5 bits (105), Expect = 6e-05
Identities = 46/251 (18%), Positives = 83/251 (33%), Gaps = 53/251 (21%)
Query: 72 VVYKGK--LENQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGDER 128
+Y N R + +K + + + E + + ++ + + + D
Sbjct: 95 WIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRH 154
Query: 129 L-----LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL- 182
+V EY+ ++L + + A + +L + AL Y S G +Y+DL
Sbjct: 155 GDPVGYIVMEYVGGQSLKRSK----GQKLPVAEAIAYLLEILPALSYLHSIG-LVYNDLK 209
Query: 183 --NAYRILFDEDGNPRLSTFGLMKN-SRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFG 239
N I+ E+ +L G + + G Y T F PE +R T + IY+ G
Sbjct: 210 PEN---IMLTEEQ-LKLIDLGAVSRINSFGYLYGT-PGFQAPEIVR-TGPTVATDIYTVG 263
Query: 240 TLLLDLLSG---------KHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290
L L +P + D RL
Sbjct: 264 RTLAALTLDLPTRNGRYVDGLPEDDPVLKTYD---------------------SYGRLLR 302
Query: 291 RCLQYEPRERP 301
R + +PR+R
Sbjct: 303 RAIDPDPRQRF 313
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 7e-05
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 19/145 (13%)
Query: 164 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST---NLAFT 219
+ A++YC + H DL +L D N +++ FGL DG+ T + +
Sbjct: 120 ILSAVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYA 177
Query: 220 PPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 277
PE + GR PE I+S G +L LL G +P D ++ L G F
Sbjct: 178 APEVIS-GRLYAGPEVDIWSCGVILYALLCG-TLP-------FDDEHVPTLFKKIRGGVF 228
Query: 278 T--DDDGTELVRLASRCLQYEPRER 300
+ + L LQ +P +R
Sbjct: 229 YIPEYLNRSVATLLMHMLQVDPLKR 253
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 7e-05
Identities = 31/159 (19%), Positives = 57/159 (35%), Gaps = 31/159 (19%)
Query: 159 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 214
++ + AL Y S+ + H DL ILF ++ FGL + + + +
Sbjct: 128 ELMKQMMNALAYFHSQH--VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTN 185
Query: 215 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 270
T PE + VT + I+S G ++ LL+G P +L+ +
Sbjct: 186 AAG-TALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGC--LPFT------GTSLEEVQQ 235
Query: 271 SCLEGQFT--------DDDGTELVRLASRCLQYEPRERP 301
+ +L++ + L +P RP
Sbjct: 236 KATYKEPNYAVECRPLTPQAVDLLK---QMLTKDPERRP 271
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 8e-05
Identities = 45/248 (18%), Positives = 86/248 (34%), Gaps = 23/248 (9%)
Query: 73 VYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131
VYK K E A K + + ++ E + + + LLG + ++
Sbjct: 35 VYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94
Query: 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 191
E+ P + + + V + +AL + SK ++ DL A +L
Sbjct: 95 IEFCPGGAVDA-IMLELDRGLTEPQIQVVCRQMLEALNFLHSKRI-IHRDLKAGNVLMTL 152
Query: 192 DGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PE-----YLRTGRVTPESVIYSFGTLL 242
+G+ RL+ FG+ + + TP PE ++ ++ I+S G L
Sbjct: 153 EGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITL 212
Query: 243 LDLLSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 298
+++ + + P L I + L +++ E L P
Sbjct: 213 IEMAQIEPPHHELNPMRVLLKIAKSDPPTLLT---PSKWSV----EFRDFLKIALDKNPE 265
Query: 299 ERPNPKSL 306
RP+ L
Sbjct: 266 TRPSAAQL 273
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 1e-04
Identities = 35/160 (21%), Positives = 59/160 (36%), Gaps = 32/160 (20%)
Query: 159 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 214
R++ + + Y + H DL IL ++D + ++ FGL +
Sbjct: 125 RIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD 182
Query: 215 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 270
T PE LR G + ++S G +L LLSG PP + +N +
Sbjct: 183 -RIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSG--TPPFY------GKNEYDILK 232
Query: 271 SCLEGQFT---------DDDGTELVRLASRCLQYEPRERP 301
G++ DD +L+R + L + P R
Sbjct: 233 RVETGKYAFDLPQWRTISDDAKDLIR---KMLTFHPSLRI 269
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 1e-04
Identities = 44/173 (25%), Positives = 66/173 (38%), Gaps = 28/173 (16%)
Query: 99 QFLEEARSVGQLRNNR-LTNLLGCCCEGDERL-LVAEYMPNETLAKHLFHWETH-PMKWA 155
F EE R V + R +T L + + L LV EY L L + P + A
Sbjct: 107 CFREE-RDVLVNGDRRWITQLH-FAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMA 164
Query: 156 MRLRVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGKS 211
+LA+ A++ G ++ D+ IL D G+ RL+ FG +K DG
Sbjct: 165 -----RFYLAEIVMAIDSVHRLG-YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTV 218
Query: 212 YSTNLAFTP----PEYLRTGRVTPESVIY-------SFGTLLLDLLSGKHIPP 253
S TP PE L+ P + Y + G ++ G+ P
Sbjct: 219 RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQ--TP 269
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 1e-04
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 19/142 (13%)
Query: 167 ALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST---NLAFTPPE 222
A+EYC + H DL +L D++ N +++ FGL DG T + + PE
Sbjct: 120 AIEYCHRHK--IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPE 177
Query: 223 YLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT-- 278
+ G+ PE ++S G +L +L G +P D + L +
Sbjct: 178 VIN-GKLYAGPEVDVWSCGIVLYVMLVG-RLP-------FDDEFIPNLFKKVNSCVYVMP 228
Query: 279 DDDGTELVRLASRCLQYEPRER 300
D L R + +P +R
Sbjct: 229 DFLSPGAQSLIRRMIVADPMQR 250
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 1e-04
Identities = 39/165 (23%), Positives = 63/165 (38%), Gaps = 40/165 (24%)
Query: 159 RVVLHLAQALEYCTSKGRALYH-DL---NAYRILFDEDGNPRLSTFGLMKNSRDGKSYST 214
++ L +A+ + + + H DL N IL D++ RLS FG + G+
Sbjct: 204 SIMRSLLEAVSFLHANN--IVHRDLKPEN---ILLDDNMQIRLSDFGFSCHLEPGEKLRE 258
Query: 215 NLAFTP----PEYLRTGRV------TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN 264
L TP PE L+ E +++ G +L LL+G PP R
Sbjct: 259 -LCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG--SPP------FWHRR 309
Query: 265 LQMLTDSCLEGQFT---------DDDGTELVRLASRCLQYEPRER 300
++ +EGQ+ +L+ R LQ +P R
Sbjct: 310 QILMLRMIMEGQYQFSSPEWDDRSSTVKDLIS---RLLQVDPEAR 351
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 36/163 (22%), Positives = 60/163 (36%), Gaps = 38/163 (23%)
Query: 159 RVVLHLAQALEYCTSKGRALYH-DL---NAYRILF---DEDGNPRLSTFGLMKNSRDGKS 211
R++ + + Y + H DL N IL ++D + ++ FGL +
Sbjct: 125 RIIKQVFSGITYMHKHN--IVHRDLKPEN---ILLESKEKDCDIKIIDFGLSTCFQQNTK 179
Query: 212 YSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM 267
T PE LR G + ++S G +L LLSG PP + +N
Sbjct: 180 MKD-RIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGT--PPFYG------KNEYD 229
Query: 268 LTDSCLEGQFT---------DDDGTELVRLASRCLQYEPRERP 301
+ G++ DD +L+R + L + P R
Sbjct: 230 ILKRVETGKYAFDLPQWRTISDDAKDLIR---KMLTFHPSLRI 269
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A Length = 336 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 2e-04
Identities = 19/126 (15%), Positives = 45/126 (35%), Gaps = 15/126 (11%)
Query: 371 SFQMWTDQMQETLNSKK-KGDVAFRQKDLKDAIECYTQ---FIDAGTMVSP--------- 417
S++M +++ E K +G V F++ K A+ Y + +++ + S
Sbjct: 135 SWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQAL 194
Query: 418 --TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALK 475
+ ++C+L A+ +A + + A A+ A+ +
Sbjct: 195 RLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQ 254
Query: 476 EGTTLE 481
+ L
Sbjct: 255 KVLQLY 260
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A Length = 151 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 2e-04
Identities = 10/140 (7%), Positives = 39/140 (27%), Gaps = 4/140 (2%)
Query: 353 EILEKISYKDDEGVANELSFQMWTDQMQETLNS-KKKGDVAFRQKDLKDAIECYTQFIDA 411
E IS + + + + + + ++ + + +++A +
Sbjct: 6 TENESISTAVIDAINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIY 65
Query: 412 GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQ 471
+ + Y + + Q A + A + + + + +A+
Sbjct: 66 DFY-NVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAK 124
Query: 472 VALKEGTTLEAKKNSTAGQK 491
+ ++ + K
Sbjct: 125 ECFEL--VIQHSNDEKLKIK 142
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 2e-04
Identities = 45/231 (19%), Positives = 83/231 (35%), Gaps = 32/231 (13%)
Query: 159 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 214
++ + +A++Y S A H D+ +L+ + +L+ FG K + S +T
Sbjct: 165 EIMKSIGEAIQYLHSINIA--HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 222
Query: 215 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 270
+TP PE L + ++S G ++ LL G PP ++ +
Sbjct: 223 -PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY--PPFYSNH--GLAISPGMKT 277
Query: 271 SCLEGQFT---------DDDGTELVRLASRCLQYEPRERPNPKSLVTALS-P-LQKETEV 319
GQ+ ++ L+R L+ EP +R ++ P + + T+V
Sbjct: 278 RIRMGQYEFPNPEWSEVSEEVKMLIR---NLLKTEPTQRMTITE---FMNHPWIMQSTKV 331
Query: 320 PSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANEL 370
P L + L + E+I K E +N L
Sbjct: 332 PQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYEQIKIKKIEDASNPL 382
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 30/146 (20%), Positives = 56/146 (38%), Gaps = 16/146 (10%)
Query: 164 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP--- 220
L AL+Y ++ ++ D+ IL DE G+ ++ F + +T +A T
Sbjct: 124 LVMALDYLQNQR-IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT-MAGTKPYM 181
Query: 221 -PEYLRTGRVTPESVI---YSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG- 275
PE + + S +S G +LL G+ P H + + + +
Sbjct: 182 APEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR--RPYHIRS---STSSKEIVHTFETTV 236
Query: 276 -QFTDDDGTELVRLASRCLQYEPRER 300
+ E+V L + L+ P +R
Sbjct: 237 VTYPSAWSQEMVSLLKKLLEPNPDQR 262
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 3e-04
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 42/205 (20%)
Query: 115 LTNLLGCCCEGDERL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQ---ALEY 170
LT L + +RL V EY L HL R + A+ AL+Y
Sbjct: 210 LTALK-YSFQTHDRLCFVMEYANGGELFFHLSRERVFSED-----RARFYGAEIVSALDY 263
Query: 171 CTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAF--TPPEYLRTG 227
S+ +Y DL ++ D+DG+ +++ FGL K +DG + T F T PEYL
Sbjct: 264 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT---FCGT-PEYL--- 316
Query: 228 RVTPESVIY----------SFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG-- 275
PE + G ++ +++ G+ P +++ + L + L
Sbjct: 317 --APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LP------FYNQDHEKLFELILMEEI 366
Query: 276 QFTDDDGTELVRLASRCLQYEPRER 300
+F G E L S L+ +P++R
Sbjct: 367 RFPRTLGPEAKSLLSGLLKKDPKQR 391
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 4e-04
Identities = 31/149 (20%), Positives = 52/149 (34%), Gaps = 22/149 (14%)
Query: 164 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN----LAF 218
L + +EY + + H D+ +L EDG+ +++ FG+ + + +N AF
Sbjct: 146 LIKGIEYLHYQK--IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAF 203
Query: 219 TPPEYLRTGRVT---PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 275
PE L R +++ G L + G P D + L
Sbjct: 204 MAPESLSETRKIFSGKALDVWAMGVTLYCFVFG-QCP-------FMDERIMCLHSKIKSQ 255
Query: 276 QFT----DDDGTELVRLASRCLQYEPRER 300
D +L L +R L P R
Sbjct: 256 ALEFPDQPDIAEDLKDLITRMLDKNPESR 284
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 5e-04
Identities = 39/144 (27%), Positives = 58/144 (40%), Gaps = 23/144 (15%)
Query: 167 ALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST-----NLAFTP 220
++YC + H DL +L D N +++ FGL DG+ T N A
Sbjct: 128 GVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAA-- 183
Query: 221 PEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 278
PE + GR PE I+S G +L LL G +P D ++ L +G F
Sbjct: 184 PEVIS-GRLYAGPEVDIWSSGVILYALLCG-TLP-------FDDDHVPTLFKKICDGIFY 234
Query: 279 --DDDGTELVRLASRCLQYEPRER 300
++ L LQ +P +R
Sbjct: 235 TPQYLNPSVISLLKHMLQVDPMKR 258
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 41.6 bits (97), Expect = 5e-04
Identities = 37/204 (18%), Positives = 67/204 (32%), Gaps = 26/204 (12%)
Query: 72 VVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCC-------- 122
V + + ++A+K+ + P R+ + ++ N++
Sbjct: 29 YVLRWIHQDTGEQVAIKQCRQELSPKNRERWC--LEIQIMKKLNHPNVVSAREVPDGLQK 86
Query: 123 -CEGDERLLVAEYMPNETLAKHLF-HWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180
D LL EY L K+L +K ++ ++ AL Y + H
Sbjct: 87 LAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR--IIH 144
Query: 181 -DLNAYRILFDEDGNPR---LSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPE 232
DL I+ + G K G+ + + T PE L + T
Sbjct: 145 RDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVG-TLQYLAPELLEQKKYTVT 203
Query: 233 SVIYSFGTLLLDLLSGKHIPPSHA 256
+SFGTL + ++G P
Sbjct: 204 VDYWSFGTLAFECITGF--RPFLP 225
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 7e-04
Identities = 48/253 (18%), Positives = 89/253 (35%), Gaps = 31/253 (12%)
Query: 72 VVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130
+VY G+ L NQ RIA+K + EE L++ + LG E +
Sbjct: 37 IVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKI 96
Query: 131 VAEYMPNETLAKHLFHWETHPMKWAMRL--RVVLHLAQALEYCTSKGRALYH-DLNAYRI 187
E +P +L+ L + P+K + + + L+Y H D+ +
Sbjct: 97 FMEQVPGGSLSA-LLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV--HRDIKGDNV 153
Query: 188 LFD-EDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRV--TPESVIYSFGT 240
L + G ++S FG K + T PE + G + I+S G
Sbjct: 154 LINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGC 213
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNLQML-----TDSC--LEGQFTDDDGTELVRLASRCL 293
++++ +GK PP + L + + + + + +C
Sbjct: 214 TIIEMATGK--PPFYEL----GEPQAAMFKVGMFKVHPEIPESMS-AEAKAFIL---KCF 263
Query: 294 QYEPRERPNPKSL 306
+ +P +R L
Sbjct: 264 EPDPDKRACANDL 276
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 40.7 bits (95), Expect = 7e-04
Identities = 44/257 (17%), Positives = 84/257 (32%), Gaps = 26/257 (10%)
Query: 76 GKLENQRRIAVKRF--NRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133
G L R F + RQ + ++ RL ++ + +
Sbjct: 112 GNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171
Query: 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 193
+ + + + + +A+ +E+ S+ + ++ DL A IL E
Sbjct: 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEKN 230
Query: 194 NPRLSTFGLMKNSRDGKSY--STNLAF----TPPEYLRTGRVTPESVIYSFGTLLLDLLS 247
++ FGL ++ Y + PE + T +S ++SFG LL ++ S
Sbjct: 231 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
Query: 248 GKHIP------PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
P +++ +M D E+ + C EP +R
Sbjct: 291 LGASPYPGVKIDEEFCRRLKEGT-RMRAPDYTTP---------EMYQTMLDCWHGEPSQR 340
Query: 301 PNPKSLVTALSPLQKET 317
P LV L L +
Sbjct: 341 PTFSELVEHLGNLLQAN 357
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 491 | |||
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.97 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.94 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.91 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.86 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.84 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.82 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.79 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.77 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.75 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.75 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.74 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.74 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.73 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.72 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.71 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 99.69 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.64 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.64 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 99.64 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 99.63 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.62 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 99.62 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.62 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.62 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.61 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.61 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.6 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.6 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.6 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.59 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 99.58 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.58 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.58 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 99.58 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.58 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 99.57 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.57 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 99.57 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.56 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 99.55 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.55 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.55 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.53 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.52 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 99.51 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.51 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 99.5 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.5 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.5 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.48 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.47 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.46 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.45 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.43 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.43 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.42 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.41 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.4 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.39 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 99.38 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.38 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.38 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.37 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.37 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.36 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.35 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.35 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.35 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.35 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.34 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.34 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.34 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 99.33 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.33 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 99.32 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.32 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.32 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.32 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.31 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 99.31 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.31 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 99.31 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.31 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.31 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.3 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.3 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.3 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.3 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.3 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.29 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.29 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.29 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.29 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.27 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.27 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.27 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.26 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.26 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 99.25 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.25 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.25 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.25 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.25 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.25 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.25 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.24 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.24 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.24 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.24 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 99.24 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.23 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.23 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.23 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.23 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.22 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.21 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.21 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.19 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.18 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 99.16 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.14 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.14 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 99.13 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 99.13 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 99.13 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 99.12 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.12 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.12 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.11 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.11 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 99.11 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 99.11 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 99.1 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.1 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.1 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.1 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 99.09 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 99.09 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.08 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.08 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 99.08 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 99.08 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 99.08 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.07 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.06 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 99.06 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 99.06 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 99.06 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 99.05 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 99.05 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 99.05 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 99.04 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 99.03 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 99.03 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 99.03 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 99.02 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 99.02 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 99.02 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 99.01 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 99.01 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 99.0 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 99.0 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 99.0 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 99.0 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 99.0 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 98.99 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 98.99 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 98.99 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 98.98 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 98.97 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 98.97 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 98.97 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 98.97 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 98.96 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 98.95 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 98.92 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 98.91 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 98.9 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 98.89 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 98.89 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.87 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 98.86 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 98.86 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 98.85 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 98.84 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 98.84 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.83 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 98.82 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.82 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 98.82 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 98.81 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 98.8 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 98.79 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 98.79 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 98.75 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 98.7 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.66 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.66 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.66 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.65 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 98.65 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.61 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.56 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 98.55 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.55 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.55 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 98.49 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 98.47 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.46 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.45 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.43 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.4 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.4 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 98.37 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 98.36 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 98.32 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.3 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.26 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 98.21 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 98.21 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 98.2 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.18 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 98.07 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 98.06 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.02 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 98.02 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 98.0 | |
| 3ffl_A | 167 | Anaphase-promoting complex subunit 7; tetratricope | 97.99 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 97.99 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 97.93 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 97.91 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.9 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 97.86 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 97.84 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 97.68 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 97.66 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 97.66 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 97.65 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 97.64 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 97.62 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 97.61 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 97.6 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 97.59 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 97.56 | |
| 3o48_A | 134 | Mitochondria fission 1 protein; tetratricopeptide | 97.55 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 97.41 | |
| 1y8m_A | 144 | FIS1; mitochondria, unknown function; NMR {Sacchar | 97.39 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 97.33 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 97.31 | |
| 1y8m_A | 144 | FIS1; mitochondria, unknown function; NMR {Sacchar | 97.3 |
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-57 Score=432.41 Aligned_cols=255 Identities=19% Similarity=0.279 Sum_probs=207.0
Q ss_pred CccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
+++..+.++||+|+||+||+|++.+ .||||+++..... ..+.|.+|+.++++++|||||+++|++.. +..+||||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 4566778899999999999999753 5999999754432 24579999999999999999999999865 56899999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC-----
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----- 208 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----- 208 (491)
||+||+|.++|.. ...++++..+..|+.||+.||.|||+++ ||||||||+||||++++++||+|||+|+....
T Consensus 112 y~~gGsL~~~l~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~-IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 189 (307)
T 3omv_A 112 WCEGSSLYKHLHV-QETKFQMFQLIDIARQTAQGMDYLHAKN-IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp CCSSCBHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred cCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence 9999999999964 3457999999999999999999999998 99999999999999999999999999986432
Q ss_pred -CCccccCCCCCCcccccC---CCCCCCccchhHHHHHHHHHhCCCCCCCchhh-HhhhccccccccccccCCCCchhHH
Q 011184 209 -GKSYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLEGQFTDDDGT 283 (491)
Q Consensus 209 -~~~~~~t~~y~aPE~~~~---~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (491)
.....||+.|||||++.+ +.++.++|||||||++|||+||+.||...... .+..........+. ....+..++.
T Consensus 190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~ 268 (307)
T 3omv_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPD-LSKLYKNCPK 268 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCC-STTSCTTSCH
T ss_pred eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCC-cccccccchH
Confidence 134579999999999964 35899999999999999999999998753221 11111111111111 1234566788
Q ss_pred HHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 284 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 284 ~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
++.+|+.+||+.||++|||+.+|++.|+.++..
T Consensus 269 ~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 269 AMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp HHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 999999999999999999999999999888653
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-57 Score=433.61 Aligned_cols=251 Identities=21% Similarity=0.265 Sum_probs=211.3
Q ss_pred ccccccccCCCCCccEEEEEEEC------CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 129 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~ 129 (491)
+..+++++||+|+||+||+|.+. +++.||||+++..... ..+.|.+|+.++++++|||||+++|+|.+++..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 44667888999999999999863 4678999999754432 3578999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHhcccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCe
Q 011184 130 LVAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP 195 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~ 195 (491)
||||||++|+|.++|.... ...+++..++.|+.||+.||.|||+++ ||||||||+||||++++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLK~~NILl~~~~~~ 184 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-VVHKDLATRNVLVYDKLNV 184 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCE
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-CCCCCccccceEECCCCCE
Confidence 9999999999999996422 235899999999999999999999998 9999999999999999999
Q ss_pred EEccCCCcccCCC------CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhcccccc
Q 011184 196 RLSTFGLMKNSRD------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQML 268 (491)
Q Consensus 196 kl~Dfgla~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~ 268 (491)
||+|||+++.... .....||+.|||||++.++.++.++|||||||+||||+| |..||.+.....+.......
T Consensus 185 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~- 263 (308)
T 4gt4_A 185 KISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNR- 263 (308)
T ss_dssp EECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTT-
T ss_pred EECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-
Confidence 9999999975422 234468899999999999999999999999999999999 78888765443332222111
Q ss_pred ccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccc
Q 011184 269 TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~ 313 (491)
.....|..++.++.+|+.+||+.||++|||+.+|++.|+.+
T Consensus 264 ----~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 264 ----QVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp ----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred ----CCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 11234567788999999999999999999999999999875
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-57 Score=437.70 Aligned_cols=253 Identities=23% Similarity=0.293 Sum_probs=208.9
Q ss_pred cccccccCCCCCccEEEEEEEC------CCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
+..+.++||+|+||+||+|.+. +++.||||+++.......+.|.+|+++|++++|||||+++|+|.+++..+||
T Consensus 42 d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV 121 (329)
T 4aoj_A 42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMV 121 (329)
T ss_dssp GEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 3455678899999999999864 4788999999865544467899999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEc
Q 011184 132 AEYMPNETLAKHLFHWE-------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLS 198 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~ 198 (491)
||||+||+|.+++.... ..++++..++.|+.||+.||.|||+++ ||||||||+||||++++.+||+
T Consensus 122 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLKp~NILl~~~~~~Ki~ 200 (329)
T 4aoj_A 122 FEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH-FVHRDLATRNCLVGQGLVVKIG 200 (329)
T ss_dssp EECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEEC
T ss_pred EEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecccccHhhEEECCCCcEEEc
Confidence 99999999999996432 246899999999999999999999998 9999999999999999999999
Q ss_pred cCCCcccCCCC------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccc
Q 011184 199 TFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDS 271 (491)
Q Consensus 199 Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~ 271 (491)
|||+++..... ....||+.|||||++.+..++.++|||||||++|||+| |+.||.......+.......
T Consensus 201 DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g---- 276 (329)
T 4aoj_A 201 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQG---- 276 (329)
T ss_dssp CCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHT----
T ss_pred ccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC----
Confidence 99999864322 23468999999999999999999999999999999999 89888765433322211111
Q ss_pred cccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 272 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 272 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
.....|..+++++.+|+.+||+.||++|||+.+|++.|+.+.+.
T Consensus 277 -~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 277 -RELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp -CCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred -CCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 12234566788999999999999999999999999999988754
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-58 Score=435.19 Aligned_cols=253 Identities=24% Similarity=0.301 Sum_probs=212.0
Q ss_pred cccccccCCCCCccEEEEEEEC------CCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
.+.+.++||+|+||+||+|.+. ++..||||+++.......+.|.+|+++|++++|||||+++|+|.+++..+||
T Consensus 14 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV 93 (299)
T 4asz_A 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMV 93 (299)
T ss_dssp GEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence 3556688899999999999863 3678999999865544467899999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhccc-----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccC
Q 011184 132 AEYMPNETLAKHLFHW-----------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 200 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~-----------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 200 (491)
||||+||+|.++|... ....+++..++.|+.||+.||.|||+++ ||||||||+|||+++++++||+||
T Consensus 94 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDlKp~NILl~~~~~~Ki~DF 172 (299)
T 4asz_A 94 FEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVGENLLVKIGDF 172 (299)
T ss_dssp EECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCC
T ss_pred EEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCccCHhhEEECCCCcEEECCc
Confidence 9999999999999642 2357999999999999999999999998 999999999999999999999999
Q ss_pred CCcccCCCC------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccc
Q 011184 201 GLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCL 273 (491)
Q Consensus 201 gla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (491)
|+++..... ....||+.|||||++.+..++.++|||||||++|||+| |+.||.......+....... .
T Consensus 173 Gla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~-----~ 247 (299)
T 4asz_A 173 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQG-----R 247 (299)
T ss_dssp SCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHT-----C
T ss_pred ccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-----C
Confidence 999754322 23458899999999999999999999999999999999 89888765433332221111 1
Q ss_pred cCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 274 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 274 ~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
....|..+++++.+|+.+||+.||++|||+++|++.|+.+.+.
T Consensus 248 ~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 248 VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 1234566778999999999999999999999999999988654
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-57 Score=436.45 Aligned_cols=246 Identities=17% Similarity=0.213 Sum_probs=207.1
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
..|+++++||+|+||+||+|+. .+|+.||||++...... ..+.+.+|+++|++|+|||||++++++.+++.+|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 4688999999999999999995 56999999999765432 24579999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 209 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 209 (491)
||+||+|.+++.......+++..++.|+.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+|+.....
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~ 182 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA 182 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-CEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHH
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHHHEEECCCCCEEEcccccceeecCCcccc
Confidence 999999999997655567899999999999999999999999 999999999999999999999999999876543
Q ss_pred CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHH
Q 011184 210 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 289 (491)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 289 (491)
....||+.|||||++.+..++.++|||||||++|||+||+.||.+.....+......... ...+..++.++.+||
T Consensus 183 ~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~-----~~~~~~~s~~~~~li 257 (350)
T 4b9d_A 183 RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF-----PPVSLHYSYDLRSLV 257 (350)
T ss_dssp HHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC-----CCCCTTSCHHHHHHH
T ss_pred cccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-----CCCCccCCHHHHHHH
Confidence 245699999999999999999999999999999999999999987654433322222111 123456778999999
Q ss_pred HHhccCCCCCCCChhHHHH
Q 011184 290 SRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~ 308 (491)
.+||+.||++|||++++++
T Consensus 258 ~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 258 SQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp HHHTCSSGGGSCCHHHHHT
T ss_pred HHHccCChhHCcCHHHHhc
Confidence 9999999999999999986
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-57 Score=433.77 Aligned_cols=244 Identities=19% Similarity=0.259 Sum_probs=211.3
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
.|+++.+||+|+||+||+|+. .+|+.||||++........+.+.+|+++|+.++|||||+++++|.+++.+|||||||+
T Consensus 75 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~ 154 (346)
T 4fih_A 75 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 154 (346)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred hcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCC
Confidence 478889999999999999995 4699999999976655567789999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----Ccc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSY 212 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 212 (491)
||+|.+++.. ..+++..+..|+.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+|+..... ...
T Consensus 155 gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~ 230 (346)
T 4fih_A 155 GGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSL 230 (346)
T ss_dssp TEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCC
T ss_pred CCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEECCCCCEEEecCcCceecCCCCCccccc
Confidence 9999999863 56999999999999999999999999 999999999999999999999999999865432 356
Q ss_pred ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 011184 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 292 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 292 (491)
+||+.|||||++.+..|+.++|||||||++|||++|+.||.+............... .....+..+++++.+||.+|
T Consensus 231 ~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~---~~~~~~~~~s~~~~dli~~~ 307 (346)
T 4fih_A 231 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---PRLKNLHKVSPSLKGFLDRL 307 (346)
T ss_dssp CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSC---CCCSCGGGSCHHHHHHHHHH
T ss_pred ccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC---CCCCccccCCHHHHHHHHHH
Confidence 799999999999999999999999999999999999999976544332222211111 11123456778999999999
Q ss_pred ccCCCCCCCChhHHHH
Q 011184 293 LQYEPRERPNPKSLVT 308 (491)
Q Consensus 293 l~~dp~~Rps~~~il~ 308 (491)
|+.||++|||+.++++
T Consensus 308 L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 308 LVRDPAQRATAAELLK 323 (346)
T ss_dssp SCSSTTTSCCHHHHTT
T ss_pred cCCChhHCcCHHHHhc
Confidence 9999999999999987
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-56 Score=476.39 Aligned_cols=239 Identities=19% Similarity=0.244 Sum_probs=193.7
Q ss_pred ccccccccCCCCCccEEEEEEEC--CCCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCe-----e
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE--NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE-----R 128 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~-----~ 128 (491)
..|++++.||+|+||+||++... +|+.||||++..... .....+.+|++++.+++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 45788888999999999999964 589999999865332 123568899999999999999999999987655 6
Q ss_pred EEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC
Q 011184 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 208 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 208 (491)
||||||++|++|.+++. ..+++..++.|+.||+.||.|||+++ ||||||||+|||++.+ .+||+|||+++....
T Consensus 160 ~lv~E~~~g~~L~~~~~----~~l~~~~~~~~~~qi~~aL~~lH~~g-iiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKG----QKLPVAEAIAYLLEILPALSYLHSIG-LVYNDLKPENIMLTEE-QLKLIDLGAVSRINS 233 (681)
T ss_dssp EEEEECCCCEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred EEEEEeCCCCcHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC-CeecccChHHeEEeCC-cEEEEecccchhccc
Confidence 99999999999998774 37999999999999999999999999 9999999999999975 899999999988777
Q ss_pred CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHH
Q 011184 209 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 288 (491)
Q Consensus 209 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (491)
.....||+.|+|||++.+. ++.++|||||||++|+|++|..|+...... .+. ........++.+.+|
T Consensus 234 ~~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~--------~~~----~~~~~~~~~~~l~~l 300 (681)
T 2pzi_A 234 FGYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVD--------GLP----EDDPVLKTYDSYGRL 300 (681)
T ss_dssp CSCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECS--------SCC----TTCHHHHHCHHHHHH
T ss_pred CCccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccc--------ccc----ccccccccCHHHHHH
Confidence 7777899999999999765 488999999999999999998765432110 110 001111234689999
Q ss_pred HHHhccCCCCCCCC-hhHHHHHhcccc
Q 011184 289 ASRCLQYEPRERPN-PKSLVTALSPLQ 314 (491)
Q Consensus 289 i~~cl~~dp~~Rps-~~~il~~L~~~~ 314 (491)
|.+||+.||.+||+ ++++...|..+.
T Consensus 301 i~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 301 LRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp HHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred HhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 99999999999995 666666665543
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-56 Score=427.37 Aligned_cols=251 Identities=17% Similarity=0.136 Sum_probs=210.3
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
+..+.+..+||+|+||+||+|+. .+|+.||||+++.... ..+|+.+++.++|||||++++++.+++.+||||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 44567778899999999999995 5699999999975432 34799999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC-CeEEccCCCcccCCCC----
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDG---- 209 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~~---- 209 (491)
|+||+|.+++.. .+++++..+..++.||+.||.|||+++ ||||||||+||||+.+| .+||+|||+|+.....
T Consensus 132 ~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 132 LEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLHTRR-ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred cCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 999999999974 357999999999999999999999999 99999999999999887 6999999999865321
Q ss_pred -----CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHH
Q 011184 210 -----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 284 (491)
Q Consensus 210 -----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (491)
....||+.|||||++.+..++.++|||||||++|||+||+.||.......+....... ......++..++++
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~---~~~~~~~~~~~s~~ 285 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASE---PPPIREIPPSCAPL 285 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHS---CCGGGGSCTTSCHH
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcC---CCCchhcCccCCHH
Confidence 2346999999999999999999999999999999999999998754332221111111 11112356677889
Q ss_pred HHHHHHHhccCCCCCCCChhHHHHHhccccccC
Q 011184 285 LVRLASRCLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 285 ~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
+.+||.+||+.||.+|||+.|+++.|.......
T Consensus 286 ~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~ 318 (336)
T 4g3f_A 286 TAQAIQEGLRKEPVHRASAMELRRKVGKALQEV 318 (336)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence 999999999999999999999999987766543
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-55 Score=434.72 Aligned_cols=245 Identities=19% Similarity=0.251 Sum_probs=212.0
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
..|+++++||+|+||+||+|+. .+|+.||||++........+.+.+|+.+|+.++|||||+++++|.+++.+|||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 3478889999999999999995 469999999998766666778999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----Cc
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 211 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 211 (491)
+||+|.+++. ...+++..+..|+.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+|+..... ..
T Consensus 231 ~gG~L~~~i~---~~~l~e~~~~~~~~qil~aL~ylH~~~-IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~ 306 (423)
T 4fie_A 231 EGGALTDIVT---HTRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 306 (423)
T ss_dssp TTEEHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCC
T ss_pred CCCcHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEecCccceECCCCCccccc
Confidence 9999999985 356999999999999999999999999 999999999999999999999999999865432 35
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
.+||+.|||||++.+..|+.++|||||||++|||++|+.||.+............... .....+..+++++.+||.+
T Consensus 307 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~---~~~~~~~~~s~~~~dli~~ 383 (423)
T 4fie_A 307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---PRLKNLHKVSPSLKGFLDR 383 (423)
T ss_dssp CEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC---CCCSCTTSSCHHHHHHHHH
T ss_pred cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC---CCCcccccCCHHHHHHHHH
Confidence 6799999999999999999999999999999999999999976544332222211111 1112344567899999999
Q ss_pred hccCCCCCCCChhHHHH
Q 011184 292 CLQYEPRERPNPKSLVT 308 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~ 308 (491)
||+.||++|||+.|+++
T Consensus 384 ~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 384 LLVRDPAQRATAAELLK 400 (423)
T ss_dssp HSCSSTTTSCCHHHHTT
T ss_pred HcCCChhHCcCHHHHhc
Confidence 99999999999999987
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-56 Score=423.28 Aligned_cols=242 Identities=18% Similarity=0.203 Sum_probs=210.1
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCC---CCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
.+|++++.||+|+||+||+|+. .+|+.||||++.+. .....+.+.+|+++|++++|||||++++++.+++.+||||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 4588899999999999999994 56999999999642 2234678999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---- 208 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~---- 208 (491)
|||+||+|.+++.. .+.+++..+..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+|+....
T Consensus 112 Ey~~gG~L~~~i~~--~~~l~e~~~~~~~~qi~~al~ylH~~~-IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 112 SYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp CCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred ecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence 99999999999974 467999999999999999999999999 99999999999999999999999999986532
Q ss_pred --CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHH
Q 011184 209 --GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 209 --~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
..+.+||+.|||||++.+..++.++||||+||++|+|++|+.||.+.....+....... ...++..+++++.
T Consensus 189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~------~~~~p~~~s~~~~ 262 (311)
T 4aw0_A 189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL------EYDFPEKFFPKAR 262 (311)
T ss_dssp CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT------CCCCCTTCCHHHH
T ss_pred ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCcccCHHHH
Confidence 23457999999999999999999999999999999999999999876544433322221 1234566778999
Q ss_pred HHHHHhccCCCCCCCChhHHH
Q 011184 287 RLASRCLQYEPRERPNPKSLV 307 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il 307 (491)
+||.+||+.||++|||+++++
T Consensus 263 dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 263 DLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp HHHHHHSCSSGGGSTTSGGGT
T ss_pred HHHHHHccCCHhHCcChHHHc
Confidence 999999999999999999864
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-55 Score=410.10 Aligned_cols=243 Identities=20% Similarity=0.250 Sum_probs=196.6
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC---CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
...|++++.||+|+||+||+|.. .+|+.||||++..... .....+.+|+++|++++|||||++++++.+++..|||
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 35678889999999999999994 5699999999965432 2356799999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC--
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 209 (491)
|||+ +|+|.+++.. .+++++..+..++.||+.||.|||+++ |+||||||+|||++.++++||+|||+|+.....
T Consensus 92 mEy~-~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~ylH~~~-IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRHK-IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp EECC-CEEHHHHHHH--SCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred EeCC-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCChHHeEECCCCCEEEeecCCCeecCCCCc
Confidence 9999 6899999874 467999999999999999999999999 999999999999999999999999999865432
Q ss_pred -CccccCCCCCCcccccCCCC-CCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHH
Q 011184 210 -KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 287 (491)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (491)
.+..||+.|||||++.+..+ +.++||||+||++|+|+||+.||.......+....... ...++..+++++.+
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~ 241 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG------VYTLPKFLSPGAAG 241 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT------CCCCCTTSCHHHHH
T ss_pred cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHH
Confidence 35679999999999998775 57999999999999999999999876544433222211 12345567789999
Q ss_pred HHHHhccCCCCCCCChhHHHH
Q 011184 288 LASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~ 308 (491)
|+.+||+.||++|||++++++
T Consensus 242 li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 242 LIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp HHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHccCChhHCcCHHHHHc
Confidence 999999999999999999998
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-55 Score=413.04 Aligned_cols=242 Identities=19% Similarity=0.260 Sum_probs=197.6
Q ss_pred cccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeec----CCeeEEEE
Q 011184 60 NIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCE----GDERLLVA 132 (491)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~----~~~~~lv~ 132 (491)
++..+||+|+||+||+|.. .++..||||++...... ..+.|.+|+++|++|+|||||+++++|.. ++.++|||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 4456789999999999995 45899999999653322 24579999999999999999999999865 34589999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccccceeeC-CCCCeEEccCCCcccCCCC-
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDG- 209 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~~- 209 (491)
|||+||+|.+++.. ...+++..+..|+.||+.||.|||+++ +||||||||+||||+ .+|.+||+|||+|+.....
T Consensus 109 Ey~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~ 186 (290)
T 3fpq_A 109 ELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF 186 (290)
T ss_dssp ECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTS
T ss_pred eCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCc
Confidence 99999999999974 467999999999999999999999975 499999999999998 4899999999999865433
Q ss_pred -CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCch-hhHhhhccccccccccccCCCCchhHHHHHH
Q 011184 210 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA-LDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 287 (491)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (491)
.+..||+.|||||++.+ .++.++|||||||++|||+||+.||.... ...+......... +..++...++++.+
T Consensus 187 ~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~----~~~~~~~~~~~~~~ 261 (290)
T 3fpq_A 187 AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK----PASFDKVAIPEVKE 261 (290)
T ss_dssp BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC----CGGGGGCCCHHHHH
T ss_pred cCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCC----CCCCCccCCHHHHH
Confidence 35579999999999874 69999999999999999999999986532 2222111111111 11223345578999
Q ss_pred HHHHhccCCCCCCCChhHHHH
Q 011184 288 LASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~ 308 (491)
||.+||+.||++|||++++++
T Consensus 262 li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 262 IIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHccCChhHCcCHHHHhc
Confidence 999999999999999999987
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-55 Score=415.81 Aligned_cols=243 Identities=19% Similarity=0.219 Sum_probs=201.1
Q ss_pred ccccccccCCCCCccEEEEEEEC----CCCEEEEEEeCCCCC--CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE----NQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
+.|++++.||+|+||+||+|+.. +++.||||+++.... .....+.+|+++|++++|||||++++++.+++..||
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 35789999999999999999852 478899999965321 123468899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC--
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-- 208 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 208 (491)
|||||+||+|.+++.. .+.+++..+..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+|+....
T Consensus 104 vmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 180 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 180 (304)
T ss_dssp EECCCTTCEEHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred EEEcCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence 9999999999999974 457999999999999999999999999 99999999999999999999999999986432
Q ss_pred --CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHH
Q 011184 209 --GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 209 --~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
..+..||+.|||||++.+..++.++|||||||++|||+||+.||.+.....+....... ...+|..+++++.
T Consensus 181 ~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~------~~~~p~~~s~~~~ 254 (304)
T 3ubd_A 181 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA------KLGMPQFLSPEAQ 254 (304)
T ss_dssp CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHH
T ss_pred ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcC------CCCCCCcCCHHHH
Confidence 24567999999999999999999999999999999999999999876544433322221 1234566788999
Q ss_pred HHHHHhccCCCCCCCCh-----hHHHH
Q 011184 287 RLASRCLQYEPRERPNP-----KSLVT 308 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~-----~~il~ 308 (491)
+||.+||+.||++|||+ +++++
T Consensus 255 ~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 255 SLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp HHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred HHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 99999999999999985 56665
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-54 Score=419.77 Aligned_cols=256 Identities=22% Similarity=0.277 Sum_probs=210.0
Q ss_pred CCccccccccCCCCCccEEEEEEECC------CCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCC-CCcceEEeEeecC-
Q 011184 55 GFAVENIVSEHGEKAPNVVYKGKLEN------QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRN-NRLTNLLGCCCEG- 125 (491)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H-~niv~~~~~~~~~- 125 (491)
..+.+++++.||+|+||+||+|.+.. ++.||||+++..... ..+.|.+|+++|.+++| ||||+++|+|...
T Consensus 62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~ 141 (353)
T 4ase_A 62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 141 (353)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecC
Confidence 34668888999999999999998532 357999999765432 24579999999999965 9999999999764
Q ss_pred CeeEEEEecCCCCCHHHHhcccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC
Q 011184 126 DERLLVAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 191 (491)
Q Consensus 126 ~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~ 191 (491)
+.++||||||++|+|.++|+... ...+++..+..++.||+.||.|||+++ ||||||||+|||+++
T Consensus 142 ~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~-iiHRDLK~~NILl~~ 220 (353)
T 4ase_A 142 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSE 220 (353)
T ss_dssp SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECG
T ss_pred CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC-eecCccCccceeeCC
Confidence 56899999999999999996421 245899999999999999999999998 999999999999999
Q ss_pred CCCeEEccCCCcccCCCCC------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhcc
Q 011184 192 DGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRN 264 (491)
Q Consensus 192 ~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~ 264 (491)
++.+||+|||+|+...... ...||+.|||||++.+..++.++|||||||++|||+| |+.||++.........
T Consensus 221 ~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~- 299 (353)
T 4ase_A 221 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR- 299 (353)
T ss_dssp GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHH-
T ss_pred CCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHH-
Confidence 9999999999998654322 3457899999999999999999999999999999998 8988876432111111
Q ss_pred ccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 265 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
..........|..+++++.+|+.+||+.||++|||+.+|++.|+.+.+
T Consensus 300 ---~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 300 ---RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp ---HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---HHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence 111111223455677899999999999999999999999999988754
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-53 Score=408.99 Aligned_cols=246 Identities=17% Similarity=0.249 Sum_probs=193.1
Q ss_pred ccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHH--HHHHHHhccCCCCcceEEeEeecCC----eeEEEE
Q 011184 59 ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFL--EEARSVGQLRNNRLTNLLGCCCEGD----ERLLVA 132 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~--~E~~~l~~l~H~niv~~~~~~~~~~----~~~lv~ 132 (491)
+.+.++||+|+||+||+|++ +|+.||||+++.. ....+. .|+..+.+++|||||+++++|..++ .++|||
T Consensus 5 i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~---~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 5 IVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred EEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc---chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 45567889999999999998 5899999999643 233344 4555667889999999999998654 579999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CCcccccccccceeeCCCCCeEEccCCCcc
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK--------GRALYHDLNAYRILFDEDGNPRLSTFGLMK 204 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~--------~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 204 (491)
|||+||+|.+++.. .++++..+.+++.|++.||.|||++ + ||||||||+||||+.++++||+|||+++
T Consensus 81 Ey~~~gsL~~~l~~---~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~-IiHRDlKp~NILl~~~~~~Ki~DFGla~ 156 (303)
T 3hmm_A 81 DYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp ECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred cCCCCCcHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-EeeccCCcccEEECCCCCEEEEeCCCCc
Confidence 99999999999963 5699999999999999999999986 6 9999999999999999999999999987
Q ss_pred cCCCC--------CccccCCCCCCcccccCC------CCCCCccchhHHHHHHHHHhCCCCCCCchh-------------
Q 011184 205 NSRDG--------KSYSTNLAFTPPEYLRTG------RVTPESVIYSFGTLLLDLLSGKHIPPSHAL------------- 257 (491)
Q Consensus 205 ~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~~Dv~slG~vl~elltg~~~~~~~~~------------- 257 (491)
..... ....||+.|||||++.+. .++.++|||||||++|||+||.+|+.....
T Consensus 157 ~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~ 236 (303)
T 3hmm_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp EEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred cccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccc
Confidence 64322 234689999999999764 367799999999999999999865532110
Q ss_pred --hHhhhccccccccccccCCCC-----chhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 258 --DLIRDRNLQMLTDSCLEGQFT-----DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 258 --~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
..+... +......+.++ ...+..+.+|+.+||+.||++|||+.+|++.|+.+.+.
T Consensus 237 ~~~~~~~~----~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 237 SVEEMRKV----VCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CHHHHHHH----HTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred hHHHHHHH----HhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 011111 11111111222 24567899999999999999999999999999988654
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-52 Score=399.02 Aligned_cols=240 Identities=18% Similarity=0.262 Sum_probs=187.0
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCC---------
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGD--------- 126 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~--------- 126 (491)
+|++++.||+|+||+||+|+. .+|+.||||+++..... ..+.+.+|+++|++++|||||+++++|.+.+
T Consensus 6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~ 85 (299)
T 4g31_A 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS 85 (299)
T ss_dssp HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence 467888999999999999995 46899999999754322 2457899999999999999999999987544
Q ss_pred ---eeEEEEecCCCCCHHHHhcccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCC
Q 011184 127 ---ERLLVAEYMPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 202 (491)
Q Consensus 127 ---~~~lv~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 202 (491)
..|||||||+||+|.+++..... ...++..++.|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+
T Consensus 86 ~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~-IiHRDlKp~NILl~~~~~vKl~DFGl 164 (299)
T 4g31_A 86 PKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGL 164 (299)
T ss_dssp -CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCCC
T ss_pred CCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc-CccccCcHHHeEECCCCcEEEccCcc
Confidence 36899999999999999974322 23556778899999999999999999 99999999999999999999999999
Q ss_pred cccCCCC----------------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccc
Q 011184 203 MKNSRDG----------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 266 (491)
Q Consensus 203 a~~~~~~----------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~ 266 (491)
|+..... ....||+.|||||++.+..++.++|||||||++|||++ ||......... ..
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~---~~ 238 (299)
T 4g31_A 165 VTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRT---LT 238 (299)
T ss_dssp C--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHH---HH
T ss_pred ceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHH---HH
Confidence 9864332 23469999999999999999999999999999999996 55443211100 00
Q ss_pred ccccccccCCCC---chhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 267 MLTDSCLEGQFT---DDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 267 ~~~~~~~~~~~~---~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.+. ...++ ...++.+.+|+.+||+.||++|||+.++++
T Consensus 239 ~~~----~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 239 DVR----NLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHH----TTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHh----cCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 011 11122 233456789999999999999999999987
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-50 Score=398.11 Aligned_cols=252 Identities=16% Similarity=0.261 Sum_probs=202.6
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeec------CCee
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCE------GDER 128 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~------~~~~ 128 (491)
.|++++.||+|+||+||+|+. .+|+.||||+++..... ..+.+.+|+++|+.++|||||++++++.. .+.+
T Consensus 55 ~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~ 134 (398)
T 4b99_A 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSV 134 (398)
T ss_dssp SEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCE
T ss_pred CeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEE
Confidence 588999999999999999995 56999999999754322 24568899999999999999999998764 3578
Q ss_pred EEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC
Q 011184 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 208 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 208 (491)
|||||||. |+|.+++. ..+++++..+..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++....
T Consensus 135 ~ivmE~~~-g~L~~~i~--~~~~l~~~~~~~~~~qil~al~ylH~~~-iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~ 210 (398)
T 4b99_A 135 YVVLDLME-SDLHQIIH--SSQPLTLEHVRYFLYQLLRGLKYMHSAQ-VIHRDLKPSNLLVNENCELKIGDFGMARGLCT 210 (398)
T ss_dssp EEEEECCS-EEHHHHHT--SSSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBCC--
T ss_pred EEEEeCCC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCc-CcCCCcCccccccCCCCCEEEeecceeeeccc
Confidence 99999996 78999996 3568999999999999999999999999 99999999999999999999999999976432
Q ss_pred --------CCccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccccccccc-------
Q 011184 209 --------GKSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC------- 272 (491)
Q Consensus 209 --------~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~------- 272 (491)
..+..||+.|||||++.+. .++.++||||+||++|||++|+.||.+................+.
T Consensus 211 ~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~ 290 (398)
T 4b99_A 211 SPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAV 290 (398)
T ss_dssp -----CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC--
T ss_pred CccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhh
Confidence 2356899999999998875 469999999999999999999999987643322111111000000
Q ss_pred -----------ccC-------CCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 273 -----------LEG-------QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 273 -----------~~~-------~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
... ......++++.+||.+||..||.+|||+.++++ .++..
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~--Hp~f~ 349 (398)
T 4b99_A 291 GAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR--HPFLA 349 (398)
T ss_dssp ---CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT--SGGGT
T ss_pred hhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc--CHhhC
Confidence 000 011235678999999999999999999999987 34443
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-49 Score=388.46 Aligned_cols=243 Identities=19% Similarity=0.260 Sum_probs=195.0
Q ss_pred cccccccCCCCCccEEEEEEEC----CCCEEEEEEeCCCCCCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE----NQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~ 132 (491)
.|++++.||+|+||+||+|+.+ +++.||||++.... ...++.+|+++|+.+ +|||||+++++|...+..||||
T Consensus 22 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvm 99 (361)
T 4f9c_A 22 VFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAM 99 (361)
T ss_dssp TCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEE
T ss_pred cEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEE
Confidence 4788889999999999999842 46789999986543 456788999999998 6999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCC-CCeEEccCCCcccCCCC--
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~~~-- 209 (491)
||++||+|.+++. .+++..+..++.||+.||.|||++| ||||||||+|||++.+ +.+||+|||+|+.....
T Consensus 100 E~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~g-IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~ 173 (361)
T 4f9c_A 100 PYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFG-IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI 173 (361)
T ss_dssp ECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSC
T ss_pred eCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCC-eEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccc
Confidence 9999999999983 4899999999999999999999999 9999999999999876 89999999999754321
Q ss_pred ------------------------------CccccCCCCCCcccccCCC-CCCCccchhHHHHHHHHHhCCCCCCCchhh
Q 011184 210 ------------------------------KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALD 258 (491)
Q Consensus 210 ------------------------------~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~~~~~ 258 (491)
...+||+.|+|||++.+.. ++.++||||+||++|||++|+.||.....+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~ 253 (361)
T 4f9c_A 174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDD 253 (361)
T ss_dssp GGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCH
Confidence 1346899999999998764 899999999999999999999988543211
Q ss_pred H--hhh---------------ccccc------c--------------------------ccccccCCCCchhHHHHHHHH
Q 011184 259 L--IRD---------------RNLQM------L--------------------------TDSCLEGQFTDDDGTELVRLA 289 (491)
Q Consensus 259 ~--~~~---------------~~~~~------~--------------------------~~~~~~~~~~~~~~~~~~~li 289 (491)
. +.. ..... . .............++++.+|+
T Consensus 254 ~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl 333 (361)
T 4f9c_A 254 LTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLL 333 (361)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHH
T ss_pred HHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHH
Confidence 0 000 00000 0 000000111234567899999
Q ss_pred HHhccCCCCCCCChhHHHH
Q 011184 290 SRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~ 308 (491)
.+||+.||++|||++|+++
T Consensus 334 ~~lL~~dP~~R~ta~eaL~ 352 (361)
T 4f9c_A 334 DKLLDLNPASRITAEEALL 352 (361)
T ss_dssp HHHTCSCTTTSCCHHHHHT
T ss_pred HHHCcCChhHCcCHHHHhc
Confidence 9999999999999999987
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-49 Score=408.56 Aligned_cols=248 Identities=18% Similarity=0.155 Sum_probs=210.6
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
..|++++.||+|+||+||+|.. .+|+.||||++......+.+.+.+|+++|+.++|||||+++++|.+++.++||||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 4578889999999999999995 569999999997655444667899999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC--CCCeEEccCCCcccCCCCC---
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE--DGNPRLSTFGLMKNSRDGK--- 210 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~--~~~~kl~Dfgla~~~~~~~--- 210 (491)
+||+|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++. .+.+||+|||+++......
T Consensus 237 ~gg~L~~~i~~-~~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~ 314 (573)
T 3uto_A 237 SGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 314 (573)
T ss_dssp CCCBHHHHHTC-TTSCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEE
T ss_pred CCCcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCChhhccccCCCCCCEEEeeccceeEccCCCcee
Confidence 99999999964 3457999999999999999999999999 999999999999985 4899999999998765443
Q ss_pred ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 211 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
...||+.|||||++.+..++.++|||||||++|||++|..||.+............... ......+..++.++.+||.
T Consensus 315 ~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~dli~ 392 (573)
T 3uto_A 315 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDW--NMDDSAFSGISEDGKDFIR 392 (573)
T ss_dssp EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCC--CCCSGGGTTSCHHHHHHHH
T ss_pred eeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCC--CCCcccccCCCHHHHHHHH
Confidence 45799999999999999999999999999999999999999987654433222211111 1111223456789999999
Q ss_pred HhccCCCCCCCChhHHHH
Q 011184 291 RCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~ 308 (491)
+||+.||.+|||+.++++
T Consensus 393 ~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 393 KLLLADPNTRMTIHQALE 410 (573)
T ss_dssp TTSCSSGGGSCCHHHHHH
T ss_pred HHccCChhHCcCHHHHhc
Confidence 999999999999999998
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-49 Score=405.86 Aligned_cols=247 Identities=19% Similarity=0.176 Sum_probs=202.9
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC---CCChhHHHHH---HHHHhccCCCCcceEEeEeecCCee
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEE---ARSVGQLRNNRLTNLLGCCCEGDER 128 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E---~~~l~~l~H~niv~~~~~~~~~~~~ 128 (491)
..++++++.||+|+||+||+|+. .+|+.||||++.+.. ........+| +.+++.++|||||+++++|.+.+.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 46789999999999999999995 469999999996421 1223334444 5667778999999999999999999
Q ss_pred EEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC
Q 011184 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 208 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 208 (491)
|||||||+||+|.++|.. .+.+++..+..++.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+|+....
T Consensus 268 ylVmEy~~GGdL~~~l~~--~~~l~E~~a~~y~~qIl~aL~yLH~~g-IiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp EEEECCCCSCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 999999999999999974 467999999999999999999999999 99999999999999999999999999987544
Q ss_pred C--CccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHH
Q 011184 209 G--KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 285 (491)
Q Consensus 209 ~--~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (491)
. .+.+||+.|||||++.+ ..|+.++|+|||||++|||++|..||.+........ ....+.. ....++..+++++
T Consensus 345 ~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~-i~~~i~~--~~~~~p~~~S~~a 421 (689)
T 3v5w_A 345 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLT--MAVELPDSFSPEL 421 (689)
T ss_dssp CCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHH-HHHHHHH--CCCCCCTTSCHHH
T ss_pred CCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHhhcC--CCCCCCccCCHHH
Confidence 3 45689999999999975 579999999999999999999999997543211110 0011111 1224566778899
Q ss_pred HHHHHHhccCCCCCCCC-----hhHHHH
Q 011184 286 VRLASRCLQYEPRERPN-----PKSLVT 308 (491)
Q Consensus 286 ~~li~~cl~~dp~~Rps-----~~~il~ 308 (491)
.+||.+||+.||.+|++ +++|++
T Consensus 422 ~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp HHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred HHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 99999999999999998 577775
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-47 Score=368.23 Aligned_cols=269 Identities=26% Similarity=0.448 Sum_probs=221.8
Q ss_pred cCHHHHHHHhcCCccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEee
Q 011184 44 FTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCC 123 (491)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~ 123 (491)
+++.++...+++| ++...||+|+||+||+|...+++.||||++........+.+.+|+.+++.++||||+++++++.
T Consensus 29 ~~~~~~~~~~~~y---~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 105 (321)
T 2qkw_B 29 VPLVDLEEATNNF---DHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105 (321)
T ss_dssp -CCSCCCCCCCCC---SCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECC
T ss_pred ecHHHHHHHHhcc---CccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEc
Confidence 3444444455555 5556679999999999998789999999988766555678999999999999999999999999
Q ss_pred cCCeeEEEEecCCCCCHHHHhcccC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCC
Q 011184 124 EGDERLLVAEYMPNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 201 (491)
Q Consensus 124 ~~~~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg 201 (491)
..+..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+++ ++||||||+||+++.++.+||+|||
T Consensus 106 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg 184 (321)
T 2qkw_B 106 ERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA-IIHRDVKSINILLDENFVPKITDFG 184 (321)
T ss_dssp CTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCSTTEEECTTCCEEECCCT
T ss_pred CCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC-eecCCCCHHHEEECCCCCEEEeecc
Confidence 9999999999999999999986432 235899999999999999999999999 9999999999999999999999999
Q ss_pred CcccCCCC------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhh-----------Hhhhcc
Q 011184 202 LMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-----------LIRDRN 264 (491)
Q Consensus 202 la~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~-----------~~~~~~ 264 (491)
++...... ....||+.|+|||++.+..++.++||||||+++|+|++|+.|+...... ......
T Consensus 185 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 264 (321)
T 2qkw_B 185 ISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264 (321)
T ss_dssp TCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTC
T ss_pred cccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccccc
Confidence 98754321 2335789999999999889999999999999999999999887543211 111122
Q ss_pred ccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 265 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
.....++......+...+..+.+++.+||+.||++|||+.++++.|+.+.+.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp CCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 2333344444556677889999999999999999999999999999887653
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-46 Score=364.85 Aligned_cols=274 Identities=29% Similarity=0.488 Sum_probs=225.1
Q ss_pred CCCCccccCHHHHHHHhcCCccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCc
Q 011184 37 GLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRL 115 (491)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~ni 115 (491)
....++.+++.++...+++|... +.||+|+||+||+|...+|+.||||++...... ....+.+|+.+++.++||||
T Consensus 13 ~~~~~~~~~~~~~~~~~~~y~~~---~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i 89 (326)
T 3uim_A 13 HLGQLKRFSLRELQVASDNFSNK---NILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 89 (326)
T ss_dssp --CCCEECCTHHHHTTTTSSCST---TEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTB
T ss_pred ccCccceecHHHHHHHhhccccc---eeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCc
Confidence 34456789999999888877655 455999999999999878999999999764432 34479999999999999999
Q ss_pred ceEEeEeecCCeeEEEEecCCCCCHHHHhcccC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcccccccccceeeC
Q 011184 116 TNLLGCCCEGDERLLVAEYMPNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSK---GRALYHDLNAYRILFD 190 (491)
Q Consensus 116 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~~iiH~Dlkp~Nill~ 190 (491)
+++++++..++..++||||+++|+|.+++.... ..++++..+..++.|++.||.|||+. + |+||||||+|||++
T Consensus 90 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~-ivH~Dlkp~Nil~~ 168 (326)
T 3uim_A 90 LRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK-IIHRDVKAANILLD 168 (326)
T ss_dssp CCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSC-EECCCCSGGGEEEC
T ss_pred cceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-eEeCCCchhhEEEC
Confidence 999999999999999999999999999997543 23589999999999999999999999 8 99999999999999
Q ss_pred CCCCeEEccCCCcccCCCC-----CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhh-------
Q 011184 191 EDGNPRLSTFGLMKNSRDG-----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD------- 258 (491)
Q Consensus 191 ~~~~~kl~Dfgla~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~------- 258 (491)
.++.+||+|||++...... ....||+.|+|||++.+..++.++||||||+++|+|++|+.||......
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~ 248 (326)
T 3uim_A 169 EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 248 (326)
T ss_dssp TTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBH
T ss_pred CCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhH
Confidence 9999999999999765432 2335899999999998888999999999999999999999888522110
Q ss_pred ------HhhhccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccc
Q 011184 259 ------LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 314 (491)
Q Consensus 259 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~ 314 (491)
.........+.+......++...+..+.+++.+||+.||.+|||+.++++.|+...
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 249 LDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp HHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred HHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 01122223333444445566778899999999999999999999999999998643
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-46 Score=359.69 Aligned_cols=245 Identities=20% Similarity=0.276 Sum_probs=208.5
Q ss_pred ccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 57 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
..|++++.||+|+||+||+|. ..+++.||||++........+.+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 20 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 99 (297)
T 3fxz_A 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (297)
T ss_dssp GTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECC
Confidence 457888889999999999999 4568999999997666566778999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----Cc
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 211 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 211 (491)
+|++|.+++.. ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++...... ..
T Consensus 100 ~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 175 (297)
T 3fxz_A 100 AGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST 175 (297)
T ss_dssp TTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCC
T ss_pred CCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCC
Confidence 99999999963 46899999999999999999999999 999999999999999999999999998765432 34
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
..||+.|+|||++.+..++.++||||||+++|+|++|..||............. .........+..++..+.+|+.+
T Consensus 176 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~ 252 (297)
T 3fxz_A 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA---TNGTPELQNPEKLSAIFRDFLNR 252 (297)
T ss_dssp CCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH---HHCSCCCSCGGGSCHHHHHHHHH
T ss_pred ccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hCCCCCCCCccccCHHHHHHHHH
Confidence 568999999999999999999999999999999999999986543222111110 01111222345667889999999
Q ss_pred hccCCCCCCCChhHHHH
Q 011184 292 CLQYEPRERPNPKSLVT 308 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~ 308 (491)
||+.||.+|||+.++++
T Consensus 253 ~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 253 CLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp HSCSSTTTSCCHHHHTT
T ss_pred HccCChhHCcCHHHHhh
Confidence 99999999999999987
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-46 Score=363.46 Aligned_cols=256 Identities=19% Similarity=0.268 Sum_probs=212.1
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
..+.+.+.||+|+||+||++.. .+++.||+|++........+.+.+|++++++++||||+++++++..++..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 3567778889999999999995 458999999987654445667999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-----
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----- 210 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----- 210 (491)
++++|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 90 ~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 167 (310)
T 3s95_A 90 KGGTLRGIIKS-MDSQYPWSQRVSFAKDIASGMAYLHSMN-IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEG 167 (310)
T ss_dssp TTCBHHHHHHH-CCTTSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEECTTSCEEECCCTTCEECC--------
T ss_pred CCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCcCeEEECCCCCEEEeecccceecccccccccc
Confidence 99999999975 3467999999999999999999999999 9999999999999999999999999987643221
Q ss_pred -------------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCC
Q 011184 211 -------------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 277 (491)
Q Consensus 211 -------------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (491)
...||+.|+|||++.+..++.++||||||+++|+|++|..|+.......... ............
T Consensus 168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~ 244 (310)
T 3s95_A 168 LRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF---GLNVRGFLDRYC 244 (310)
T ss_dssp ------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS---SBCHHHHHHHTC
T ss_pred cccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH---hhhhhccccccC
Confidence 3468999999999999999999999999999999999998775432111100 000111111123
Q ss_pred CchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccC
Q 011184 278 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 278 ~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
+..+++.+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 245 ~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~ 284 (310)
T 3s95_A 245 PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284 (310)
T ss_dssp CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 4455678999999999999999999999999999987653
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-46 Score=358.24 Aligned_cols=259 Identities=20% Similarity=0.299 Sum_probs=207.3
Q ss_pred CCccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 55 GFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
.+..+++++.||+|+||+||+|.. +|+.||||++....... .+.+.+|++++++++||||+++++++...+..++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 356778889999999999999987 57899999997654322 356889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCC-CCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccccceeeCCCCCeEEccCCCcccCCCC-
Q 011184 133 EYMPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 209 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~-~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 209 (491)
||+++++|.+++..... ..+++..++.++.||+.||.|||+.+ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~ 193 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF 193 (309)
T ss_dssp ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC---------
T ss_pred ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccc
Confidence 99999999999974221 23899999999999999999999985 3999999999999999999999999998754332
Q ss_pred ---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHH
Q 011184 210 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
....||+.|+|||++.+..++.++||||||+++|+|++|+.||............. ........+..+++.+.
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~ 269 (309)
T 3p86_A 194 LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG----FKCKRLEIPRNLNPQVA 269 (309)
T ss_dssp --------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHH----HSCCCCCCCTTSCHHHH
T ss_pred cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH----hcCCCCCCCccCCHHHH
Confidence 34568999999999999999999999999999999999999887554332221111 11122344566778999
Q ss_pred HHHHHhccCCCCCCCChhHHHHHhccccccCC
Q 011184 287 RLASRCLQYEPRERPNPKSLVTALSPLQKETE 318 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~ 318 (491)
+|+.+||+.||.+|||+.++++.|+.+.....
T Consensus 270 ~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~ 301 (309)
T 3p86_A 270 AIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301 (309)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHC---
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999877543
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-45 Score=356.70 Aligned_cols=261 Identities=19% Similarity=0.235 Sum_probs=217.0
Q ss_pred cccCHHHHHHHhcCCcc-------ccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCC
Q 011184 42 REFTLEQLKNATSGFAV-------ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNN 113 (491)
Q Consensus 42 ~~~~~~~~~~~~~~~~~-------~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ 113 (491)
..++.+++..++..... +.....||+|+||.||+|... +|+.||||++........+.+.+|+.+++.++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 46889999988876322 344567899999999999965 6999999999876666677899999999999999
Q ss_pred CcceEEeEeecCCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC
Q 011184 114 RLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 193 (491)
Q Consensus 114 niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~ 193 (491)
||+++++++...+..++||||++|++|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~---~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~ 178 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVS---QVRLNEEQIATVCEAVLQALAYLHAQG-VIHRDIKSDSILLTLDG 178 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTC
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCC
Confidence 99999999999999999999999999999984 457999999999999999999999999 99999999999999999
Q ss_pred CeEEccCCCcccCCCC----CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccc
Q 011184 194 NPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 269 (491)
Q Consensus 194 ~~kl~Dfgla~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~ 269 (491)
.+||+|||++...... ....||+.|+|||++.+..++.++||||||+++|+|++|+.|+.................
T Consensus 179 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 258 (321)
T 2c30_A 179 RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPP 258 (321)
T ss_dssp CEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSC
T ss_pred cEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC
Confidence 9999999998765432 345689999999999988999999999999999999999998865433222111111100
Q ss_pred cccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 270 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
.....+...++.+.+++.+||+.||++|||+.++++.
T Consensus 259 ---~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 259 ---PKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp ---CCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ---CCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0111233466789999999999999999999999983
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-46 Score=361.97 Aligned_cols=244 Identities=20% Similarity=0.293 Sum_probs=208.5
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
...|++++.||+|+||.||+|.. .+|+.||||++...... ..+.+.+|+++++.++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 45678888999999999999995 57999999999654322 2456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC---
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 209 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 209 (491)
||++|++|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 94 e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 170 (328)
T 3fe3_A 94 EYASGGEVFDYLVA--HGRMKEKEARSKFRQIVSAVQYCHQKR-IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL 170 (328)
T ss_dssp CCCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGG
T ss_pred ECCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcc
Confidence 99999999999964 356999999999999999999999999 999999999999999999999999999765433
Q ss_pred CccccCCCCCCcccccCCCCC-CCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHH
Q 011184 210 KSYSTNLAFTPPEYLRTGRVT-PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 288 (491)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~~~-~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (491)
....||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+.............. ...+...++++.+|
T Consensus 171 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~------~~~p~~~s~~~~~l 244 (328)
T 3fe3_A 171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK------YRIPFYMSTDCENL 244 (328)
T ss_dssp GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC------CCCCTTSCHHHHHH
T ss_pred ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC------CCCCCCCCHHHHHH
Confidence 345789999999999987765 79999999999999999999998765544333222211 12344567899999
Q ss_pred HHHhccCCCCCCCChhHHHH
Q 011184 289 ASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~ 308 (491)
+.+||+.||.+|||++++++
T Consensus 245 i~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 245 LKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp HHHHCCSSTTTSCCHHHHTT
T ss_pred HHHHCCCChhHCcCHHHHhc
Confidence 99999999999999999987
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-45 Score=358.92 Aligned_cols=245 Identities=20% Similarity=0.241 Sum_probs=208.9
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCC---CCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
...+++++.||+|+||+||++.. .+|+.||||+++.. .......+.+|+.+++.++||||+++++++...+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 45678888999999999999995 46899999999643 233466789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC---
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--- 208 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--- 208 (491)
|||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++....
T Consensus 84 ~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 84 MEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp EECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred EeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence 999999999999864 357899999999999999999999999 99999999999999999999999999875322
Q ss_pred -CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHH
Q 011184 209 -GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 287 (491)
Q Consensus 209 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (491)
.....||+.|+|||++.+..++.++|||||||++|||++|..||.......+....... ...++..+++++.+
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~ 234 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAKS 234 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHH
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHH
Confidence 23457899999999999989999999999999999999999998765443332222111 12345567789999
Q ss_pred HHHHhccCCCCCCC-----ChhHHHHH
Q 011184 288 LASRCLQYEPRERP-----NPKSLVTA 309 (491)
Q Consensus 288 li~~cl~~dp~~Rp-----s~~~il~~ 309 (491)
||.+||+.||.+|| +++++++.
T Consensus 235 li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 235 LLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp HHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred HHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 99999999999999 89999874
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-45 Score=347.71 Aligned_cols=251 Identities=22% Similarity=0.314 Sum_probs=213.0
Q ss_pred ccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
..+++++.||+|+||+||++...+++.||||++.... ...+.+.+|++++++++||||+++++++.+++..++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 4678889999999999999998788899999997644 345789999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-----Cc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KS 211 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 211 (491)
+++|.+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...... ..
T Consensus 89 ~~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 166 (269)
T 4hcu_A 89 HGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 166 (269)
T ss_dssp TCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred CCcHHHHHHh-cCcccCHHHHHHHHHHHHHHHHHHHhCC-eecCCcchheEEEcCCCCEEeccccccccccccccccccC
Confidence 9999999964 3456899999999999999999999999 999999999999999999999999998765432 23
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
..+|+.|+|||.+.+..++.++||||||+++|+|++ |..|+............... .....+...+..+.+++.
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~ 241 (269)
T 4hcu_A 167 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-----FRLYKPRLASTHVYQIMN 241 (269)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-----CCCCCCTTSCHHHHHHHH
T ss_pred cccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcC-----ccCCCCCcCCHHHHHHHH
Confidence 345778999999998899999999999999999999 88887655443322221111 112234445678999999
Q ss_pred HhccCCCCCCCChhHHHHHhccccc
Q 011184 291 RCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
+||+.||.+|||+.++++.|+.+..
T Consensus 242 ~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 242 HCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHccCCcccCcCHHHHHHHHHHHHH
Confidence 9999999999999999999988754
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-45 Score=351.64 Aligned_cols=257 Identities=18% Similarity=0.230 Sum_probs=210.5
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCC---hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
.|++++.||+|+||+||++.. .+++.||||++....... .+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 91 (294)
T 4eqm_A 12 RYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVME 91 (294)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEe
Confidence 477888999999999999995 468999999986544333 3578899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 209 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 209 (491)
|++|++|.+++.. ..++++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 92 ~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 168 (294)
T 4eqm_A 92 YIEGPTLSEYIES--HGPLSVDTAINFTNQILDGIKHAHDMR-IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ 168 (294)
T ss_dssp CCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCSSSTTC-------
T ss_pred CCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEEeCCCccccccccccc
Confidence 9999999999964 357999999999999999999999999 999999999999999999999999998765432
Q ss_pred -CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHH
Q 011184 210 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 288 (491)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (491)
....||+.|+|||.+.+..++.++||||||+++|+|++|+.||................... .....+..++..+.++
T Consensus 169 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l 247 (294)
T 4eqm_A 169 TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPN-VTTDVRKDIPQSLSNV 247 (294)
T ss_dssp ------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCC-HHHHSCTTSCHHHHHH
T ss_pred cCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCC-cchhcccCCCHHHHHH
Confidence 23468999999999999899999999999999999999999987654433222111111111 1112334566889999
Q ss_pred HHHhccCCCCCCC-ChhHHHHHhccccccCC
Q 011184 289 ASRCLQYEPRERP-NPKSLVTALSPLQKETE 318 (491)
Q Consensus 289 i~~cl~~dp~~Rp-s~~~il~~L~~~~~~~~ 318 (491)
+.+||+.||.+|| +++++.+.|+.+.....
T Consensus 248 i~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~ 278 (294)
T 4eqm_A 248 ILRATEKDKANRYKTIQEMKDDLSSVLHENR 278 (294)
T ss_dssp HHHHSCSSGGGSCSSHHHHHHHHHTSSSSSS
T ss_pred HHHHhcCCHhHccccHHHHHHHHHHHHhhcc
Confidence 9999999999998 89999999988876543
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-46 Score=359.07 Aligned_cols=254 Identities=21% Similarity=0.279 Sum_probs=209.9
Q ss_pred ccccccccCCCCCccEEEEEEEC----CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE----NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
..+++++.||+|+||+||+|... .+..||||+++..... ..+.+.+|+.+++.++||||+++++++..++..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 45778889999999999999963 3446999999754322 245789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 210 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 210 (491)
|||++|++|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 129 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 206 (325)
T 3kul_A 129 TEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGMRYLSDLG-YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD 206 (325)
T ss_dssp EECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCSSCEECC----
T ss_pred eeCCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEECCCCCEEECCCCcccccccCcc
Confidence 999999999999964 3457999999999999999999999999 9999999999999999999999999998654321
Q ss_pred ------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHH
Q 011184 211 ------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 283 (491)
Q Consensus 211 ------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (491)
...+|+.|+|||++.+..++.++||||||+++|+|++ |..||............... .....+..++.
T Consensus 207 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 281 (325)
T 3kul_A 207 AAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG-----YRLPAPMGCPH 281 (325)
T ss_dssp CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTT-----CCCCCCTTCCH
T ss_pred ceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC-----CCCCCCCCcCH
Confidence 2234668999999998889999999999999999999 88888655433322221111 11223456678
Q ss_pred HHHHHHHHhccCCCCCCCChhHHHHHhccccccC
Q 011184 284 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 284 ~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
.+.+|+.+||+.||.+|||+.++++.|+.+....
T Consensus 282 ~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 282 ALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 9999999999999999999999999999987653
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-45 Score=362.49 Aligned_cols=253 Identities=21% Similarity=0.299 Sum_probs=209.4
Q ss_pred ccccccccCCCCCccEEEEEEEC--------CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhcc-CCCCcceEEeEeecCC
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE--------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGD 126 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~ 126 (491)
..+.+++.||+|+||.||+|... ++..||||+++..... ..+.+.+|+.+++.+ +||||++++++|...+
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 160 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 160 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence 45778889999999999999842 3457999999754321 245789999999999 8999999999999999
Q ss_pred eeEEEEecCCCCCHHHHhcccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCC
Q 011184 127 ERLLVAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 192 (491)
Q Consensus 127 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~ 192 (491)
..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.+
T Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~ 239 (370)
T 2psq_A 161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTEN 239 (370)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTT
T ss_pred CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-eeccccchhhEEECCC
Confidence 9999999999999999997532 135789999999999999999999999 9999999999999999
Q ss_pred CCeEEccCCCcccCCCC------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccc
Q 011184 193 GNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNL 265 (491)
Q Consensus 193 ~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~ 265 (491)
+.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||++ |..|+.......+.....
T Consensus 240 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~ 319 (370)
T 2psq_A 240 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 319 (370)
T ss_dssp CCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH
T ss_pred CCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh
Confidence 99999999999854432 22345778999999998899999999999999999999 888876544332221111
Q ss_pred cccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 266 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
.......+..++..+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 320 -----~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~ 364 (370)
T 2psq_A 320 -----EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364 (370)
T ss_dssp -----TTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111223455677899999999999999999999999999988764
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-45 Score=359.90 Aligned_cols=246 Identities=17% Similarity=0.185 Sum_probs=205.8
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCC------ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP------DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
.|++++.||+|+||+||++... +|+.||||+++..... ..+.+.+|+.+++.++||||+++++++...+..++
T Consensus 13 ~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 92 (361)
T 2yab_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVL 92 (361)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEE
Confidence 4778888999999999999954 6899999999754322 24678999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC----CeEEccCCCcccC
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG----NPRLSTFGLMKNS 206 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfgla~~~ 206 (491)
||||++||+|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||++...
T Consensus 93 v~e~~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~ 169 (361)
T 2yab_A 93 ILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169 (361)
T ss_dssp EEECCCSCBHHHHHTT--CSCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCSSCEEC
T ss_pred EEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEeCCCCCccCEEEEecCCceEc
Confidence 9999999999999963 457999999999999999999999999 99999999999998776 7999999999865
Q ss_pred CCC---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHH
Q 011184 207 RDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 283 (491)
Q Consensus 207 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (491)
... ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+................ .....+...+.
T Consensus 170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~ 247 (361)
T 2yab_A 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD--FDEEFFSQTSE 247 (361)
T ss_dssp CTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC--CCHHHHTTSCH
T ss_pred CCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC--CCchhccCCCH
Confidence 443 3456899999999999889999999999999999999999998765443322221111100 00011234567
Q ss_pred HHHHHHHHhccCCCCCCCChhHHHH
Q 011184 284 ELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 284 ~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.+.+||.+||..||.+|||+.++++
T Consensus 248 ~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 248 LAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhc
Confidence 8999999999999999999999987
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-45 Score=345.71 Aligned_cols=252 Identities=21% Similarity=0.305 Sum_probs=211.6
Q ss_pred ccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
..+++++.||+|+||+||++...++..||||+++... ...+.+.+|++++.+++||||+++++++..++..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (268)
T 3sxs_A 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYIS 86 (268)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccC
Confidence 4577888999999999999998888899999997654 245679999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-----c
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----S 211 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-----~ 211 (491)
+++|.+++... ...+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++....... .
T Consensus 87 ~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 164 (268)
T 3sxs_A 87 NGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESHQ-FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG 164 (268)
T ss_dssp TCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTT-EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCS
T ss_pred CCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCcCcceEEECCCCCEEEccCccceecchhhhhcccC
Confidence 99999999642 346899999999999999999999999 9999999999999999999999999987654432 2
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
..+|+.|+|||.+.+..++.++||||||+++|+|++ |..|+............... .....+...+..+.+++.
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~ 239 (268)
T 3sxs_A 165 TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQG-----HRLYRPHLASDTIYQIMY 239 (268)
T ss_dssp CCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT-----CCCCCCTTSCHHHHHHHH
T ss_pred CCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcC-----CCCCCCCcChHHHHHHHH
Confidence 335667999999998889999999999999999999 88887654333222111111 111223445678999999
Q ss_pred HhccCCCCCCCChhHHHHHhcccccc
Q 011184 291 RCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
+||+.||.+|||+.++++.|+.+...
T Consensus 240 ~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 240 SCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp HTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred HHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 99999999999999999999998764
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-45 Score=351.58 Aligned_cols=244 Identities=18% Similarity=0.231 Sum_probs=208.6
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCC---CCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
...+++++.||+|+||.||++.. .+|+.||||+++.. .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 45678889999999999999995 46899999999643 123456788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-C
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-K 210 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~ 210 (491)
|||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... .
T Consensus 85 ~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~ 161 (318)
T 1fot_A 85 MDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY 161 (318)
T ss_dssp ECCCCSCBHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC
T ss_pred EeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChheEEEcCCCCEEEeecCcceecCCccc
Confidence 999999999999974 457899999999999999999999999 999999999999999999999999999865443 3
Q ss_pred ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 211 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
...||+.|+|||++.+..++.++|||||||++|||++|..||............... ...++...+.++.+++.
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~ 235 (318)
T 1fot_A 162 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA------ELRFPPFFNEDVKDLLS 235 (318)
T ss_dssp CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHH
T ss_pred cccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHHHHH
Confidence 557899999999999989999999999999999999999998765433322222111 12345566789999999
Q ss_pred HhccCCCCCCC-----ChhHHHH
Q 011184 291 RCLQYEPRERP-----NPKSLVT 308 (491)
Q Consensus 291 ~cl~~dp~~Rp-----s~~~il~ 308 (491)
+||+.||.+|| +++++++
T Consensus 236 ~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 236 RLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp HHTCSCTTTCTTSSTTTTHHHHT
T ss_pred HHhccCHHHcCCCcCCCHHHHhc
Confidence 99999999999 8888886
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-45 Score=371.29 Aligned_cols=253 Identities=20% Similarity=0.300 Sum_probs=212.7
Q ss_pred ccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
..+++.+.||+|+||+||+|.+.++..||||+++... ...+.|.+|+.++++++||||+++++++. .+..++||||++
T Consensus 188 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~ 265 (454)
T 1qcf_A 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMA 265 (454)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCT
T ss_pred HHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecC
Confidence 3467778899999999999999888899999998654 35778999999999999999999999986 567899999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-----Cc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KS 211 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 211 (491)
+|+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 266 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~ 344 (454)
T 1qcf_A 266 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 344 (454)
T ss_dssp TCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCS
T ss_pred CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCC
Confidence 999999997533346889999999999999999999999 999999999999999999999999999865432 22
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
..+++.|+|||++.+..++.++||||||+++|||+| |+.|+.......+....... .....+..++.++.+||.
T Consensus 345 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l~~li~ 419 (454)
T 1qcf_A 345 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-----YRMPRPENCPEELYNIMM 419 (454)
T ss_dssp SSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHT-----CCCCCCTTSCHHHHHHHH
T ss_pred CcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHHHHH
Confidence 345678999999998899999999999999999999 88888765433322211111 112234566789999999
Q ss_pred HhccCCCCCCCChhHHHHHhccccccC
Q 011184 291 RCLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
+||+.||.+|||+++|+..|+.+....
T Consensus 420 ~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 420 RCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred HHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 999999999999999999999987643
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-45 Score=368.91 Aligned_cols=252 Identities=25% Similarity=0.357 Sum_probs=211.0
Q ss_pred CCccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCC-eeEEEEe
Q 011184 55 GFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD-ERLLVAE 133 (491)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~-~~~lv~e 133 (491)
+...+++++.||+|+||.||+|.+. |+.||||+++... ..+.|.+|+.++++++||||+++++++...+ ..++|||
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e 267 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence 3456788899999999999999984 7899999998654 5678999999999999999999999987765 7899999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-Ccc
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSY 212 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~ 212 (491)
|+++|+|.+++.......+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++..... ...
T Consensus 268 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 346 (450)
T 1k9a_A 268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 346 (450)
T ss_dssp CCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTSCEEECCCTTCEECC------
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCC
Confidence 999999999998654455799999999999999999999999 999999999999999999999999999864432 233
Q ss_pred ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
.+++.|+|||++.+..++.++||||||+++|||+| |+.|++............. ......+..+++.+.+||.+
T Consensus 347 ~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~-----~~~~~~p~~~~~~l~~li~~ 421 (450)
T 1k9a_A 347 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-----GYKMDAPDGCPPAVYDVMKN 421 (450)
T ss_dssp CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHT-----TCCCCCCTTCCHHHHHHHHH
T ss_pred CCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCcCCHHHHHHHHH
Confidence 56789999999999999999999999999999998 9888865432222111111 11223455677899999999
Q ss_pred hccCCCCCCCChhHHHHHhccccc
Q 011184 292 CLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
||+.||.+|||+.++++.|+.+..
T Consensus 422 cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 422 CWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HcCCChhHCcCHHHHHHHHHHHHH
Confidence 999999999999999999988764
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-45 Score=363.02 Aligned_cols=253 Identities=22% Similarity=0.287 Sum_probs=200.2
Q ss_pred cccccccCCCCCccEEEEEEEC----CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE----NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
.+.+.+.||+|+||.||+|+.. ++..||||+++..... ..+.+.+|+.++++++||||+++++++...+..++||
T Consensus 46 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 125 (373)
T 2qol_A 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125 (373)
T ss_dssp GCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEE
Confidence 4667778899999999999854 4778999999764322 2457999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC--
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-- 210 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-- 210 (491)
||+++++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 126 e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 203 (373)
T 2qol_A 126 EYMENGSLDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA 203 (373)
T ss_dssp ECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred eCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEEcCCCCEEECcCccccccccCCcc
Confidence 99999999999974 3457999999999999999999999999 9999999999999999999999999987654321
Q ss_pred -----ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHH
Q 011184 211 -----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 284 (491)
Q Consensus 211 -----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (491)
...+++.|+|||++.+..++.++||||||+++|||++ |+.|+.......+....... .....+..++..
T Consensus 204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~ 278 (373)
T 2qol_A 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-----YRLPPPMDCPAA 278 (373)
T ss_dssp ----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTT-----EECCCCTTCBHH
T ss_pred ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCccccHH
Confidence 1234678999999998999999999999999999998 88888654433222211111 111224456688
Q ss_pred HHHHHHHhccCCCCCCCChhHHHHHhccccccC
Q 011184 285 LVRLASRCLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 285 ~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
+.+++.+||+.||.+||++.++++.|+.+....
T Consensus 279 l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 279 LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 999999999999999999999999999887643
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=353.55 Aligned_cols=258 Identities=19% Similarity=0.298 Sum_probs=207.3
Q ss_pred ccccccccCCCCCccEEEEEEE-----CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecC--CeeE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-----ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERL 129 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--~~~~ 129 (491)
..+++++.||+|+||+||++.+ .+++.||||++........+.+.+|++++++++||||+++++++... ...+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 4578889999999999999984 25889999999765444456789999999999999999999998653 5689
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 209 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 209 (491)
+||||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 90 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQD 167 (295)
T ss_dssp EEEECCTTCBHHHHHHH-CGGGCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCSCC-----
T ss_pred EEEEeCCCCCHHHHHHh-cccccCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHhhEEEcCCCeEEEccCcccccccCC
Confidence 99999999999999965 2345899999999999999999999999 999999999999999999999999999865432
Q ss_pred -------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhc-----------cccccccc
Q 011184 210 -------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR-----------NLQMLTDS 271 (491)
Q Consensus 210 -------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~-----------~~~~~~~~ 271 (491)
....++..|+|||.+.+..++.++||||||+++|+|++|..|+........... ........
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (295)
T 3ugc_A 168 KEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 247 (295)
T ss_dssp --------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred cceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhc
Confidence 123456779999999999999999999999999999999987654332211100 00001111
Q ss_pred cccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 272 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 272 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
......+..++.++.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 248 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 248 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 112234556778999999999999999999999999999988654
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-46 Score=358.70 Aligned_cols=254 Identities=15% Similarity=0.221 Sum_probs=201.2
Q ss_pred ccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCC----eeEEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD----ERLLVA 132 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~----~~~lv~ 132 (491)
..+++++.||+|+||+||+|... ++.||||++.... .....+.+|+.++++++||||+++++++.... ..++||
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~ 101 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT 101 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred hhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence 46788889999999999999974 7899999996432 12345667899999999999999999998754 369999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhC----------CCcccccccccceeeCCCCCeEEccCCC
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK----------GRALYHDLNAYRILFDEDGNPRLSTFGL 202 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~----------~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 202 (491)
||+++|+|.+++.. ..+++..++.++.||+.||.|||+. + |+||||||+|||++.++.+||+|||+
T Consensus 102 e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~-ivH~Dlkp~Nill~~~~~~kL~DFg~ 177 (322)
T 3soc_A 102 AFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA-ISHRDIKSKNVLLKNNLTACIADFGL 177 (322)
T ss_dssp ECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE-EECSCCSGGGEEECTTCCEEECCCTT
T ss_pred ecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC-EEeCCCChHhEEECCCCeEEEccCCc
Confidence 99999999999953 5699999999999999999999998 8 99999999999999999999999999
Q ss_pred cccCCCC------CccccCCCCCCcccccCC-----CCCCCccchhHHHHHHHHHhCCCCCCCchhh-------------
Q 011184 203 MKNSRDG------KSYSTNLAFTPPEYLRTG-----RVTPESVIYSFGTLLLDLLSGKHIPPSHALD------------- 258 (491)
Q Consensus 203 a~~~~~~------~~~~~t~~y~aPE~~~~~-----~~~~~~Dv~slG~vl~elltg~~~~~~~~~~------------- 258 (491)
++..... ....||+.|+|||++.+. .++.++|||||||++|||+||+.||.+....
T Consensus 178 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 257 (322)
T 3soc_A 178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHP 257 (322)
T ss_dssp CEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSC
T ss_pred ccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCC
Confidence 9754322 234689999999999863 3566889999999999999999887543110
Q ss_pred ---HhhhccccccccccccCC-CCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 259 ---LIRDRNLQMLTDSCLEGQ-FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 259 ---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
.+..........+..... .....+.++.+|+.+||+.||++|||+.++++.|+.+.+.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 258 SLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp CHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred chhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 000000001111111000 1224567799999999999999999999999999988653
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-45 Score=354.10 Aligned_cols=254 Identities=16% Similarity=0.136 Sum_probs=206.8
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEEecC
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
.+++++.||+|+||.||+|.. .+++.||||++.... ....+.+|+.+++.+ +||||+++++++..++..++||||+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (330)
T 2izr_A 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL 87 (330)
T ss_dssp TEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred CeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence 467788889999999999994 578999999987543 345689999999999 9999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCC-----eEEccCCCcccCCCC-
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN-----PRLSTFGLMKNSRDG- 209 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~-----~kl~Dfgla~~~~~~- 209 (491)
+++|.+++... ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++. +||+|||+++.....
T Consensus 88 -~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~-iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~ 164 (330)
T 2izr_A 88 -GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKN-LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 164 (330)
T ss_dssp -CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTT
T ss_pred -CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCC
Confidence 89999999752 467999999999999999999999999 999999999999998887 999999999864321
Q ss_pred ----------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHh---hhccccccccccccCC
Q 011184 210 ----------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI---RDRNLQMLTDSCLEGQ 276 (491)
Q Consensus 210 ----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 276 (491)
....||+.|+|||++.+..++.++||||||+++|||++|+.||........ ......... ......
T Consensus 165 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~-~~~~~~ 243 (330)
T 2izr_A 165 TKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKR-ATPIEV 243 (330)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHH-HSCHHH
T ss_pred CCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhc-cCCHHH
Confidence 345689999999999998999999999999999999999999875321111 000000000 000001
Q ss_pred CCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccCC
Q 011184 277 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 318 (491)
Q Consensus 277 ~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~ 318 (491)
.....+ ++.+++..||+.||.+||++.+|++.|+.+.....
T Consensus 244 ~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~ 284 (330)
T 2izr_A 244 LCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKG 284 (330)
T ss_dssp HTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 112244 89999999999999999999999999988876543
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-45 Score=345.73 Aligned_cols=252 Identities=25% Similarity=0.340 Sum_probs=209.9
Q ss_pred CccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
...+++++.||+|+||+||++...++..||||+++... ...+.+.+|++++..++||||+++++++...+..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 34678889999999999999998888899999997654 24578999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-----C
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----K 210 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~ 210 (491)
++++|.+++... ...+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++...... .
T Consensus 102 ~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 179 (283)
T 3gen_A 102 ANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 179 (283)
T ss_dssp TTCBHHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTT
T ss_pred CCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCccceEEEcCCCCEEEcccccccccccccccccc
Confidence 999999999642 356999999999999999999999999 999999999999999999999999998765432 2
Q ss_pred ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHH
Q 011184 211 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 289 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 289 (491)
...+|+.|+|||++.+..++.++||||||+++|+|++ |+.||............... .....+...+..+.+++
T Consensus 180 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li 254 (283)
T 3gen_A 180 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG-----LRLYRPHLASEKVYTIM 254 (283)
T ss_dssp STTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT-----CCCCCCTTCCHHHHHHH
T ss_pred CCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcc-----cCCCCCCcCCHHHHHHH
Confidence 3345778999999998899999999999999999998 88887654433222221111 11223344567899999
Q ss_pred HHhccCCCCCCCChhHHHHHhccccc
Q 011184 290 SRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
.+||+.||.+|||+.++++.|..+..
T Consensus 255 ~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 255 YSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp HHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHccCChhHCcCHHHHHHHHHHHhh
Confidence 99999999999999999999988764
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-44 Score=346.43 Aligned_cols=271 Identities=30% Similarity=0.486 Sum_probs=221.2
Q ss_pred CccccCHHHHHHHhcCCccccc---cccCCCCCccEEEEEEECCCCEEEEEEeCCCCC----CChhHHHHHHHHHhccCC
Q 011184 40 SFREFTLEQLKNATSGFAVENI---VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAW----PDPRQFLEEARSVGQLRN 112 (491)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~---i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~H 112 (491)
.+..|++.++..++++|+...+ ...||+|+||+||+|.. +++.||||++..... ...+.+.+|+.+++.++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 3568999999999999986632 25679999999999987 578999999965321 124678999999999999
Q ss_pred CCcceEEeEeecCCeeEEEEecCCCCCHHHHhcccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC
Q 011184 113 NRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 191 (491)
Q Consensus 113 ~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~ 191 (491)
|||+++++++...+..++||||+++++|.+++.... ..++++..++.++.||+.||.|||+++ ++||||||+||+++.
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH-HIHRDIKSANILLDE 168 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECT
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecCCCCHHHEEEcC
Confidence 999999999999999999999999999999986432 356899999999999999999999999 999999999999999
Q ss_pred CCCeEEccCCCcccCCCC------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhH----hh
Q 011184 192 DGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL----IR 261 (491)
Q Consensus 192 ~~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~----~~ 261 (491)
++.+||+|||++...... ....||+.|+|||.+.+ .++.++||||||+++|+|++|..|+....... +.
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 247 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHH
Confidence 999999999998765432 23468899999998874 58899999999999999999998876432111 10
Q ss_pred hc------cccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccc
Q 011184 262 DR------NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 314 (491)
Q Consensus 262 ~~------~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~ 314 (491)
.. .+....+.. ....+...+..+.+++.+||+.||.+|||+.++++.|+.+.
T Consensus 248 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 248 EEIEDEEKTIEDYIDKK-MNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HHHHTTSCCHHHHSCSS-CSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHhhhhhhhhhhhcccc-ccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 00 011111111 12345667889999999999999999999999999998775
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-46 Score=366.37 Aligned_cols=252 Identities=26% Similarity=0.370 Sum_probs=209.3
Q ss_pred ccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
..+.+++.||+|+||.||+|... +++.||||+++..... ....+.+|++++++++||||+++++++...+..++||||
T Consensus 114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 193 (377)
T 3cbl_A 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMEL 193 (377)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEc
Confidence 45677889999999999999965 6899999998754321 134688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC----
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 210 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 210 (491)
+++|+|.+++.. ....+++..+..++.||+.||.|||+++ ++||||||+|||++.++.+||+|||+++......
T Consensus 194 ~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~ 271 (377)
T 3cbl_A 194 VQGGDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAAS 271 (377)
T ss_dssp CTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECC
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-cCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeec
Confidence 999999999964 2346899999999999999999999999 9999999999999999999999999987644321
Q ss_pred --ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHH
Q 011184 211 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 287 (491)
Q Consensus 211 --~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (491)
...+++.|+|||.+.+..++.++||||||+++|||++ |..|+.............. ......+..++..+.+
T Consensus 272 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~ 346 (377)
T 3cbl_A 272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEK-----GGRLPCPELCPDAVFR 346 (377)
T ss_dssp SSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHT-----TCCCCCCTTCCHHHHH
T ss_pred CCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCCHHHHH
Confidence 1234677999999998889999999999999999998 8888765443322211111 1112234556789999
Q ss_pred HHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 288 LASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
|+.+||+.||.+|||+.++++.|+.+..
T Consensus 347 li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 347 LMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 9999999999999999999999988764
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-45 Score=352.95 Aligned_cols=253 Identities=21% Similarity=0.326 Sum_probs=207.4
Q ss_pred ccccccccCCCCCccEEEEEEEC-CC-------CEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCee
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE-NQ-------RRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 128 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~ 128 (491)
..+.+++.||+|+||+||+|... ++ ..||+|++........+.+.+|+.++++++||||+++++++..++..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 35677888999999999999953 34 47999999765555567899999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCC--------eEEccC
Q 011184 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN--------PRLSTF 200 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~--------~kl~Df 200 (491)
++||||++|++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++. +||+||
T Consensus 88 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Df 165 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKK-NKNCINILWKLEVAKQLAAAMHFLEENT-LIHGNVCAKNILLIREEDRKTGNPPFIKLSDP 165 (289)
T ss_dssp EEEEECCTTCBHHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEEECCBGGGTBCCEEEECCC
T ss_pred EEEEECCCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHhhCC-eECCCcCcceEEEecCCcccccccceeeeccC
Confidence 999999999999999974 2344899999999999999999999999 999999999999998887 999999
Q ss_pred CCcccCCCCCccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCc
Q 011184 201 GLMKNSRDGKSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 279 (491)
Q Consensus 201 gla~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (491)
|++..........+|+.|+|||++.+ ..++.++||||||+++|+|++|..|+.............. .....+.
T Consensus 166 g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~------~~~~~~~ 239 (289)
T 4fvq_A 166 GISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYE------DRHQLPA 239 (289)
T ss_dssp CSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH------TTCCCCC
T ss_pred cccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhh------ccCCCCC
Confidence 99987666556678999999999987 6689999999999999999997655543322111111100 0112233
Q ss_pred hhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccC
Q 011184 280 DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 280 ~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
..+.++.+|+.+||+.||.+|||+.++++.|+.+....
T Consensus 240 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 240 PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 34567999999999999999999999999999987643
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-45 Score=360.06 Aligned_cols=244 Identities=19% Similarity=0.254 Sum_probs=204.5
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCC---CCCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~l 130 (491)
...+++++.||+|+||+||+++. .+|+.||||+++.. .......+.+|..++..+ +||||+++++++...+..++
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 45678888999999999999995 45899999999643 123456788999999988 79999999999999999999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC--
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-- 208 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 208 (491)
||||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++....
T Consensus 102 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~ 178 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQK--SRRFDEARARFYAAEIISALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG 178 (353)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC--
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCCHHHEEECCCCCEEEccccceeecccCC
Confidence 9999999999999974 357999999999999999999999999 99999999999999999999999999885332
Q ss_pred --CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHH
Q 011184 209 --GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 209 --~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
.....||+.|+|||++.+..++.++|||||||++|||++|..||.......+....... ...++..++.++.
T Consensus 179 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~ 252 (353)
T 3txo_A 179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND------EVVYPTWLHEDAT 252 (353)
T ss_dssp -------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHH
T ss_pred ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHH
Confidence 23457899999999999888999999999999999999999999776544333322221 1234555678999
Q ss_pred HHHHHhccCCCCCCCCh------hHHHH
Q 011184 287 RLASRCLQYEPRERPNP------KSLVT 308 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~------~~il~ 308 (491)
+|+.+||+.||.+||++ +++++
T Consensus 253 ~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 253 GILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp HHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred HHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 99999999999999998 77776
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=351.28 Aligned_cols=246 Identities=15% Similarity=0.155 Sum_probs=204.5
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCC------ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP------DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
.|++++.||+|+||+||++... +|+.||||++...... ..+.+.+|+.+++.++||||+++++++...+..++
T Consensus 12 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 91 (326)
T 2y0a_A 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL 91 (326)
T ss_dssp HEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 3677888899999999999954 5899999999654322 35679999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC----CeEEccCCCcccC
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG----NPRLSTFGLMKNS 206 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfgla~~~ 206 (491)
||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||++...
T Consensus 92 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~ 168 (326)
T 2y0a_A 92 ILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168 (326)
T ss_dssp EEECCCSCBHHHHHTT--SSCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEEcCCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHHCC-eEcCCCCHHHEEEecCCCCCCCEEEEECCCCeEC
Confidence 9999999999999963 467999999999999999999999999 99999999999999877 7999999999865
Q ss_pred CCC---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHH
Q 011184 207 RDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 283 (491)
Q Consensus 207 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (491)
... ....||+.|+|||++.+..++.++||||||+++|+|++|..||................. ..........+.
T Consensus 169 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 246 (326)
T 2y0a_A 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY--EFEDEYFSNTSA 246 (326)
T ss_dssp CTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCC--CCCHHHHTTSCH
T ss_pred CCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCC--CcCccccccCCH
Confidence 432 345689999999999988999999999999999999999999876543322211111000 000011224567
Q ss_pred HHHHHHHHhccCCCCCCCChhHHHH
Q 011184 284 ELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 284 ~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.+.+|+.+||+.||.+|||+.++++
T Consensus 247 ~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 247 LAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHccCChhhCCCHHHHhc
Confidence 8999999999999999999999998
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-45 Score=353.43 Aligned_cols=249 Identities=15% Similarity=0.183 Sum_probs=206.6
Q ss_pred CccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
+..|.+++.||+|+||+||++... +++.||+|.+.... .....+.+|+.+++.++||||+++++++...+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 346788889999999999999954 58899999987432 2345688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC--CCCeEEccCCCcccCCCCC--
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE--DGNPRLSTFGLMKNSRDGK-- 210 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~--~~~~kl~Dfgla~~~~~~~-- 210 (491)
++|++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++. ++.+||+|||++.......
T Consensus 83 ~~g~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~g-ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~ 160 (321)
T 1tki_A 83 ISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHN-IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF 160 (321)
T ss_dssp CCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcc
Confidence 999999999964 2347999999999999999999999999 999999999999986 7899999999998765443
Q ss_pred -ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHH
Q 011184 211 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 289 (491)
Q Consensus 211 -~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 289 (491)
...+|+.|+|||++.+..++.++||||||+++|+|++|..||................... .......++.++.+|+
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~s~~~~~li 238 (321)
T 1tki_A 161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTF--DEEAFKEISIEAMDFV 238 (321)
T ss_dssp EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCC--CHHHHTTSCHHHHHHH
T ss_pred ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCC--ChhhhccCCHHHHHHH
Confidence 3458999999999998888999999999999999999999987654433222221111100 0001124567899999
Q ss_pred HHhccCCCCCCCChhHHHHH
Q 011184 290 SRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~ 309 (491)
.+||..||.+|||+.++++.
T Consensus 239 ~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 239 DRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HTTSCSSGGGSCCHHHHHHS
T ss_pred HHHcCCChhHCcCHHHHhcC
Confidence 99999999999999999983
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-45 Score=357.28 Aligned_cols=251 Identities=18% Similarity=0.137 Sum_probs=196.1
Q ss_pred CCccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 55 GFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
....|++++.||+|+||+||++... +++.||||++.... ...+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 3456888999999999999999954 68999999997644 234678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCC--eEEccCCCcccCCC---
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN--PRLSTFGLMKNSRD--- 208 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~--~kl~Dfgla~~~~~--- 208 (491)
|++||+|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++. +||+|||+++....
T Consensus 97 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~ql~~~L~~LH~~~-ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~ 173 (361)
T 3uc3_A 97 YASGGELYERICN--AGRFSEDEARFFFQQLLSGVSYCHSMQ-ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ 173 (361)
T ss_dssp CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred eCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCceEEEeecCccccccccCC
Confidence 9999999999864 356999999999999999999999999 999999999999987765 99999999874322
Q ss_pred CCccccCCCCCCcccccCCCCCCC-ccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHH
Q 011184 209 GKSYSTNLAFTPPEYLRTGRVTPE-SVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 287 (491)
Q Consensus 209 ~~~~~~t~~y~aPE~~~~~~~~~~-~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (491)
.....||+.|+|||++.+..++.+ +|||||||++|+|++|+.||...............+............+++.+.+
T Consensus 174 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 253 (361)
T 3uc3_A 174 PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCH 253 (361)
T ss_dssp -------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHH
T ss_pred CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHH
Confidence 234568999999999988777655 8999999999999999998865322111111111111111111112235678999
Q ss_pred HHHHhccCCCCCCCChhHHHHH
Q 011184 288 LASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~ 309 (491)
||.+||+.||.+|||+.++++.
T Consensus 254 li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 254 LISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp HHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHccCChhHCcCHHHHHhC
Confidence 9999999999999999999974
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-45 Score=372.26 Aligned_cols=253 Identities=21% Similarity=0.336 Sum_probs=214.1
Q ss_pred ccccccccCCCCCccEEEEEEECC-CCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLEN-QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
..+++...||+|+||.||+|.+.. +..||||+++... ...+.|.+|+.++++++||||++++++|...+..+|||||+
T Consensus 220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~ 298 (495)
T 1opk_A 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 298 (495)
T ss_dssp GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence 456778899999999999999654 8899999997654 35678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-----
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----- 210 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----- 210 (491)
++|+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 299 ~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 377 (495)
T 1opk_A 299 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 377 (495)
T ss_dssp TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCT
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhhEEECCCCcEEEeecccceeccCCceeecC
Confidence 9999999997655567999999999999999999999999 9999999999999999999999999998654321
Q ss_pred ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHH
Q 011184 211 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 289 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 289 (491)
...+++.|+|||++.+..++.++|||||||++|||++ |..|+.......+.... ........+..++..+.+||
T Consensus 378 ~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~li 452 (495)
T 1opk_A 378 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL-----EKDYRMERPEGCPEKVYELM 452 (495)
T ss_dssp TCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH-----HTTCCCCCCTTCCHHHHHHH
T ss_pred CCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHH-----HcCCCCCCCCCCCHHHHHHH
Confidence 2234678999999998889999999999999999999 88887654333222111 11122234556778999999
Q ss_pred HHhccCCCCCCCChhHHHHHhcccccc
Q 011184 290 SRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
.+||+.||.+|||+.+|++.|+.+...
T Consensus 453 ~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 453 RACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred HHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 999999999999999999999988643
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-45 Score=352.61 Aligned_cols=248 Identities=19% Similarity=0.175 Sum_probs=201.7
Q ss_pred CccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
+..|++++.||+|+||+||+|... +++.||||++..... ...+.+.+|+.+++.++||||+++++++..++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 456888899999999999999954 689999999864432 234678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC-----
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----- 208 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----- 208 (491)
|++|++|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 86 ~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 162 (323)
T 3tki_A 86 YCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (323)
T ss_dssp CCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cCCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence 999999999986 3457999999999999999999999999 99999999999999999999999999975422
Q ss_pred -CCccccCCCCCCcccccCCCC-CCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHH
Q 011184 209 -GKSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 209 -~~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
.....||+.|+|||++.+..+ +.++||||||+++|+|++|+.||............ .............++..+.
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 239 (323)
T 3tki_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD---WKEKKTYLNPWKKIDSAPL 239 (323)
T ss_dssp CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHH---HHTTCTTSTTGGGSCHHHH
T ss_pred ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHH---HhcccccCCccccCCHHHH
Confidence 124568999999999987775 77899999999999999999988653221110000 0000111111245667899
Q ss_pred HHHHHhccCCCCCCCChhHHHHH
Q 011184 287 RLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~ 309 (491)
+|+.+||+.||.+|||+.++++.
T Consensus 240 ~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 240 ALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHHccCChhhCcCHHHHhhC
Confidence 99999999999999999999874
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=347.70 Aligned_cols=250 Identities=21% Similarity=0.273 Sum_probs=200.2
Q ss_pred CccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
...|++++.||+|+||+||+|...+|+.||||++....... ...+.+|++++++++||||+++++++..++..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 46788999999999999999998889999999997543222 4578899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 209 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 209 (491)
|++ ++|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 100 ~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 176 (311)
T 3niz_A 100 FME-KDLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQHR-ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY 176 (311)
T ss_dssp CCS-EEHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC--
T ss_pred CCC-CCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCchHhEEECCCCCEEEccCcCceecCCCcccc
Confidence 998 588888764 3456999999999999999999999999 999999999999999999999999999765422
Q ss_pred CccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccccccc------------------
Q 011184 210 KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD------------------ 270 (491)
Q Consensus 210 ~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~------------------ 270 (491)
....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||...............+..
T Consensus 177 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 256 (311)
T 3niz_A 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQR 256 (311)
T ss_dssp -CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSC
T ss_pred cCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhc
Confidence 33467999999999876 45899999999999999999999988654322111111000000
Q ss_pred ------ccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 271 ------SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 271 ------~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
...........++++.+|+.+||+.||.+|||++++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 257 TFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp CCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred ccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00000012234578999999999999999999999997
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-45 Score=367.48 Aligned_cols=253 Identities=24% Similarity=0.336 Sum_probs=209.0
Q ss_pred ccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
..+++...||+|+||.||+|.+.++..||||+++... ...+.|.+|+.++++++||||+++++++.. +..++||||++
T Consensus 184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~ 261 (452)
T 1fmk_A 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 261 (452)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhc
Confidence 3466778899999999999998877889999997654 346789999999999999999999999876 67899999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-----Cc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KS 211 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 211 (491)
+|+|.+++.......+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 262 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 340 (452)
T 1fmk_A 262 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 340 (452)
T ss_dssp TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEECCCCCEEECCCccceecCCCceecccC
Confidence 999999997533456899999999999999999999999 999999999999999999999999999865432 12
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
..+++.|+|||.+.+..++.++||||||+++|||++ |+.|+.+.....+....... .....+..++..+.+||.
T Consensus 341 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l~~li~ 415 (452)
T 1fmk_A 341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-----YRMPCPPECPESLHDLMC 415 (452)
T ss_dssp --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-----CCCCCCTTSCHHHHHHHH
T ss_pred CcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHHHHH
Confidence 345678999999998899999999999999999999 88888664433222211111 112234567789999999
Q ss_pred HhccCCCCCCCChhHHHHHhccccccC
Q 011184 291 RCLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
+||+.||++|||++++++.|+.+....
T Consensus 416 ~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 416 QCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred HHccCChhhCcCHHHHHHHHHHHhccC
Confidence 999999999999999999999987654
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=354.33 Aligned_cols=244 Identities=16% Similarity=0.178 Sum_probs=209.1
Q ss_pred CccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCC---CCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
...+++++.||+|+||.||++... +|+.||||++... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 457888899999999999999954 6899999998642 223456788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-C
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-K 210 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~ 210 (491)
|||++||+|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... .
T Consensus 120 ~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~ 196 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196 (350)
T ss_dssp EECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC
T ss_pred EcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCccceEEECCCCCEEEcccccceeccCCcc
Confidence 999999999999974 356999999999999999999999999 999999999999999999999999999865443 3
Q ss_pred ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 211 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
...||+.|+|||++.+..++.++|||||||++|+|++|..||.......+....... ...++..++.++.++|.
T Consensus 197 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~ 270 (350)
T 1rdq_E 197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG------KVRFPSHFSSDLKDLLR 270 (350)
T ss_dssp CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTCCHHHHHHHH
T ss_pred cccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHH
Confidence 567899999999999989999999999999999999999998765443332222111 11345566789999999
Q ss_pred HhccCCCCCCCC-----hhHHHH
Q 011184 291 RCLQYEPRERPN-----PKSLVT 308 (491)
Q Consensus 291 ~cl~~dp~~Rps-----~~~il~ 308 (491)
+||+.||.+||+ +++|++
T Consensus 271 ~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 271 NLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HHSCSCTTTCTTSSTTTTHHHHT
T ss_pred HHhhcCHHhccCCccCCHHHHHh
Confidence 999999999998 888876
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=358.43 Aligned_cols=249 Identities=17% Similarity=0.247 Sum_probs=203.6
Q ss_pred CCccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCC---CCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeE
Q 011184 55 GFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERL 129 (491)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~ 129 (491)
+...+++++.||+|+||+||+++.. +++.||||+++... ......+.+|..++.++ +||||+++++++...+..+
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 3456788899999999999999954 58899999997543 22345688999999987 8999999999999999999
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC--
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR-- 207 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~-- 207 (491)
+||||++||+|..++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++...
T Consensus 130 lV~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEEcCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 99999999999999874 357999999999999999999999999 9999999999999999999999999997532
Q ss_pred --CCCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhh-----hccccccccccccCCCCch
Q 011184 208 --DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR-----DRNLQMLTDSCLEGQFTDD 280 (491)
Q Consensus 208 --~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 280 (491)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ......+.. ....++..
T Consensus 207 ~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~ 284 (396)
T 4dc2_A 207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPRS 284 (396)
T ss_dssp TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH--CCCCCCTT
T ss_pred CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc--cccCCCCc
Confidence 223567899999999999999999999999999999999999998532111000 000011111 11235566
Q ss_pred hHHHHHHHHHHhccCCCCCCCCh------hHHHH
Q 011184 281 DGTELVRLASRCLQYEPRERPNP------KSLVT 308 (491)
Q Consensus 281 ~~~~~~~li~~cl~~dp~~Rps~------~~il~ 308 (491)
++.++.+||.+||+.||.+||++ ++|++
T Consensus 285 ~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~ 318 (396)
T 4dc2_A 285 LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 318 (396)
T ss_dssp SCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred CCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence 77899999999999999999986 56665
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=357.21 Aligned_cols=248 Identities=17% Similarity=0.234 Sum_probs=205.3
Q ss_pred CCccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCC---CCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEE
Q 011184 55 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
++..+++++.||+|+||.||++.. .+++.||||++... .......+.+|+.+++.++||||++++++|...+..++
T Consensus 13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 92 (384)
T 4fr4_A 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFM 92 (384)
T ss_dssp CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 456788999999999999999995 45889999998642 22345678999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 209 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 209 (491)
||||+.||+|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.+|.+||+|||++......
T Consensus 93 v~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 93 VVDLLLGGDLRYHLQQ--NVHFKEETVKLFICELVMALDYLQNQR-IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp EECCCTTEEHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 9999999999999973 467999999999999999999999999 999999999999999999999999999865433
Q ss_pred --CccccCCCCCCcccccC---CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHH
Q 011184 210 --KSYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 284 (491)
Q Consensus 210 --~~~~~t~~y~aPE~~~~---~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (491)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.......... ....+. .....++..++..
T Consensus 170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~-~~~~~~--~~~~~~p~~~s~~ 246 (384)
T 4fr4_A 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKE-IVHTFE--TTVVTYPSAWSQE 246 (384)
T ss_dssp CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHH-HHHHHH--HCCCCCCTTSCHH
T ss_pred ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHH-HHHHHh--hcccCCCCcCCHH
Confidence 35678999999999974 458999999999999999999999986432111100 000000 0112345567789
Q ss_pred HHHHHHHhccCCCCCCCC-hhHHHH
Q 011184 285 LVRLASRCLQYEPRERPN-PKSLVT 308 (491)
Q Consensus 285 ~~~li~~cl~~dp~~Rps-~~~il~ 308 (491)
+.+||.+||+.||.+||+ +++++.
T Consensus 247 ~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 247 MVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp HHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred HHHHHHHHhcCCHhHhcccHHHHHc
Confidence 999999999999999998 677765
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=363.47 Aligned_cols=246 Identities=17% Similarity=0.191 Sum_probs=204.6
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
.|++++.||+|+||+||++.. .+|+.||+|++...... ..+.+.+|+.+++.++||||+++++++.+++..++||||
T Consensus 12 ~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~ 91 (444)
T 3soa_A 12 EYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDL 91 (444)
T ss_dssp HEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECC
T ss_pred CeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEe
Confidence 577888899999999999994 56899999999754422 245688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeC---CCCCeEEccCCCcccCCCC--
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD---EDGNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~---~~~~~kl~Dfgla~~~~~~-- 209 (491)
++||+|.+.+.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||++......
T Consensus 92 ~~gg~L~~~i~~--~~~~~e~~~~~i~~qil~aL~~lH~~g-ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~ 168 (444)
T 3soa_A 92 VTGGELFEDIVA--REYYSEADASHCIQQILEAVLHCHQMG-VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ 168 (444)
T ss_dssp CBCCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC
T ss_pred CCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc
Confidence 999999998874 457999999999999999999999999 99999999999998 5688999999999765443
Q ss_pred --CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHH
Q 011184 210 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 287 (491)
Q Consensus 210 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (491)
....||+.|+|||++.+..++.++|||||||++|+|++|..||.................. ........+++++.+
T Consensus 169 ~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~ 246 (444)
T 3soa_A 169 AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD--FPSPEWDTVTPEAKD 246 (444)
T ss_dssp BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC--CCTTTTTTSCHHHHH
T ss_pred eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCC--CCccccccCCHHHHH
Confidence 2357899999999999889999999999999999999999998765443332222211111 111122356789999
Q ss_pred HHHHhccCCCCCCCChhHHHH
Q 011184 288 LASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~ 308 (491)
|+.+||+.||.+|||+.++++
T Consensus 247 li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 247 LINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp HHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHcCCChhHCCCHHHHhc
Confidence 999999999999999999998
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-45 Score=360.60 Aligned_cols=255 Identities=20% Similarity=0.313 Sum_probs=209.6
Q ss_pred ccccccccCCCCCccEEEEEEEC------CCCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 129 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~ 129 (491)
..+++++.||+|+||+||+|.+. +++.||||+++.... .....+.+|+.++++++||||+++++++...+..+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 35678889999999999999943 366899999965432 22456889999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHhcccC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC---CeEEccCC
Q 011184 130 LVAEYMPNETLAKHLFHWE-----THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG---NPRLSTFG 201 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~---~~kl~Dfg 201 (491)
+||||++||+|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kL~DFG 229 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFG 229 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEEecCCCCceEEECCCc
Confidence 9999999999999997532 135899999999999999999999999 99999999999999554 59999999
Q ss_pred CcccC------CCCCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhcccccccccccc
Q 011184 202 LMKNS------RDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 274 (491)
Q Consensus 202 la~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (491)
+++.. .......+|+.|+|||++.+..++.++|||||||++|||++ |..||............... ..
T Consensus 230 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~-----~~ 304 (367)
T 3l9p_A 230 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG-----GR 304 (367)
T ss_dssp HHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT-----CC
T ss_pred cccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CC
Confidence 98642 22334567889999999998999999999999999999998 88888765443322221111 11
Q ss_pred CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccC
Q 011184 275 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 275 ~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
...+..++..+.+|+.+||+.||.+|||+.+|++.|+.+....
T Consensus 305 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 305 MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 2234556678999999999999999999999999999887654
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-45 Score=355.06 Aligned_cols=244 Identities=18% Similarity=0.246 Sum_probs=206.4
Q ss_pred CccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCC---CCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~l 130 (491)
...+.+++.||+|+||.||+|... +|+.||||+++... ......+..|..++..+ +||||+++++++...+..++
T Consensus 16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~l 95 (345)
T 1xjd_A 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF 95 (345)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEE
Confidence 456778888899999999999964 58999999996532 23456788999999987 99999999999999999999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC--
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-- 208 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 208 (491)
||||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++....
T Consensus 96 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 172 (345)
T 1xjd_A 96 VMEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD 172 (345)
T ss_dssp EEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCChhhEEECCCCCEEEeEChhhhhcccCC
Confidence 9999999999999964 357999999999999999999999999 99999999999999999999999999975422
Q ss_pred --CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHH
Q 011184 209 --GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 209 --~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
.....||+.|+|||++.+..++.++|||||||++|||++|..||.......+....... ...++..++.++.
T Consensus 173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~ 246 (345)
T 1xjd_A 173 AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD------NPFYPRWLEKEAK 246 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHH
T ss_pred CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhC------CCCCCcccCHHHH
Confidence 23557899999999999989999999999999999999999998765443332222111 1234556778999
Q ss_pred HHHHHhccCCCCCCCChh-HHHH
Q 011184 287 RLASRCLQYEPRERPNPK-SLVT 308 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~~-~il~ 308 (491)
+|+.+||..||.+||++. ++++
T Consensus 247 ~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 247 DLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp HHHHHHSCSSGGGSBTTBSCGGG
T ss_pred HHHHHHhcCCHhHcCCChHHHHc
Confidence 999999999999999997 6654
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-44 Score=353.97 Aligned_cols=247 Identities=19% Similarity=0.220 Sum_probs=204.7
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
.|++++.||+|+||+||++.. .+|+.||||++...... ..+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 30 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~ 109 (362)
T 2bdw_A 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL 109 (362)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred CeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence 467788889999999999995 45899999999754432 235688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCC---CCeEEccCCCcccCCCC--
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED---GNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~---~~~kl~Dfgla~~~~~~-- 209 (491)
++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||++......
T Consensus 110 ~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~ 186 (362)
T 2bdw_A 110 VTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 186 (362)
T ss_dssp CCSCBHHHHHTT--CSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCS
T ss_pred CCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcc
Confidence 999999999863 457899999999999999999999999 9999999999999865 45999999999876543
Q ss_pred -CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHH
Q 011184 210 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 288 (491)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (491)
....||+.|+|||++.+..++.++|||||||++|+|++|..||.......+.......... ........+++++.+|
T Consensus 187 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~l 264 (362)
T 2bdw_A 187 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD--YPSPEWDTVTPEAKSL 264 (362)
T ss_dssp CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCTTGGGGSCHHHHHH
T ss_pred cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC--CCcccccCCCHHHHHH
Confidence 2457899999999999888999999999999999999999998765433322211111110 0111123466899999
Q ss_pred HHHhccCCCCCCCChhHHHHH
Q 011184 289 ASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~ 309 (491)
+.+||+.||.+|||+.++++.
T Consensus 265 i~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 265 IDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp HHHHSCSSGGGSCCHHHHTTS
T ss_pred HHHHcCCChhhCcCHHHHhcC
Confidence 999999999999999999873
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-45 Score=354.68 Aligned_cols=244 Identities=19% Similarity=0.237 Sum_probs=205.3
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCC---CCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
+..|.+++.||+|+||+||+|.. .+++.||||++... .......+.+|+.+++.++||||+++++++...+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 45688889999999999999995 56899999998642 122345789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC--
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 209 (491)
|||+ +|+|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 88 ~E~~-~g~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~ 163 (336)
T 3h4j_B 88 IEYA-GGELFDYIVE--KKRMTEDEGRRFFQQIICAIEYCHRHK-IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF 163 (336)
T ss_dssp ECCC-CEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT-CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBT
T ss_pred EECC-CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCchhhEEEcCCCCEEEEEeccceeccCCcc
Confidence 9999 6899998864 357999999999999999999999999 999999999999999999999999998865443
Q ss_pred -CccccCCCCCCcccccCCCC-CCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHH
Q 011184 210 -KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 287 (491)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (491)
....||+.|+|||++.+..+ +.++||||||+++|+|++|+.||........... +.. .....+...++.+.+
T Consensus 164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~----i~~--~~~~~p~~~s~~~~~ 237 (336)
T 3h4j_B 164 LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKK----VNS--CVYVMPDFLSPGAQS 237 (336)
T ss_dssp TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCC----CCS--SCCCCCTTSCHHHHH
T ss_pred cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHH----HHc--CCCCCcccCCHHHHH
Confidence 34568999999999987775 7899999999999999999999865433222111 111 112345567789999
Q ss_pred HHHHhccCCCCCCCChhHHHHH
Q 011184 288 LASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~ 309 (491)
|+.+||+.||.+|||++++++.
T Consensus 238 li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 238 LIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp HHHTTSCSSGGGSCCHHHHTTC
T ss_pred HHHHHcCCChhHCcCHHHHHhC
Confidence 9999999999999999999873
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-44 Score=345.21 Aligned_cols=245 Identities=17% Similarity=0.197 Sum_probs=198.0
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--------------------------ChhHHHHHHHHHh
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--------------------------DPRQFLEEARSVG 108 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~E~~~l~ 108 (491)
+..|++++.||+|+||.||+|.. .+++.||||++...... ..+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 45678888999999999999995 46889999999654311 1356899999999
Q ss_pred ccCCCCcceEEeEeec--CCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccc
Q 011184 109 QLRNNRLTNLLGCCCE--GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 186 (491)
Q Consensus 109 ~l~H~niv~~~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~N 186 (491)
+++||||+++++++.. .+..++||||+++++|.+++ ...++++..+..++.||+.||.|||+++ |+||||||+|
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~N 167 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP---TLKPLSEDQARFYFQDLIKGIEYLHYQK-IIHRDIKPSN 167 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS---CSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHH
Confidence 9999999999999986 56789999999999998865 3467999999999999999999999999 9999999999
Q ss_pred eeeCCCCCeEEccCCCcccCCCC----CccccCCCCCCcccccCCC---CCCCccchhHHHHHHHHHhCCCCCCCchhhH
Q 011184 187 ILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTGR---VTPESVIYSFGTLLLDLLSGKHIPPSHALDL 259 (491)
Q Consensus 187 ill~~~~~~kl~Dfgla~~~~~~----~~~~~t~~y~aPE~~~~~~---~~~~~Dv~slG~vl~elltg~~~~~~~~~~~ 259 (491)
||++.++.+||+|||++...... ....||+.|+|||++.+.. .+.++||||||+++|+|++|+.||.......
T Consensus 168 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~ 247 (298)
T 2zv2_A 168 LLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC 247 (298)
T ss_dssp EEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred EEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHH
Confidence 99999999999999999765433 2456899999999998655 3778999999999999999999987654333
Q ss_pred hhhccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 260 IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
......... ........++.++.+|+.+||+.||.+|||+.++++
T Consensus 248 ~~~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 248 LHSKIKSQA----LEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHHHHCC----CCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHhccc----CCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 222111111 111112345678999999999999999999999976
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=354.45 Aligned_cols=259 Identities=22% Similarity=0.285 Sum_probs=212.1
Q ss_pred hcCCccccccccCCCCCccEEEEEEEC------CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecC
Q 011184 53 TSGFAVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG 125 (491)
Q Consensus 53 ~~~~~~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~ 125 (491)
.-....+++++.||+|+||.||+|... +++.||||+++..... ..+.+.+|+.++++++||||+++++++..+
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 122 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG 122 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence 334456788888999999999999963 3478999999754322 245789999999999999999999999999
Q ss_pred CeeEEEEecCCCCCHHHHhcccC----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccc
Q 011184 126 DERLLVAEYMPNETLAKHLFHWE----------------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLN 183 (491)
Q Consensus 126 ~~~~lv~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlk 183 (491)
+..++||||+++++|.+++.... ...+++..++.++.||+.||.|||+++ |+|||||
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlk 201 (343)
T 1luf_A 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-FVHRDLA 201 (343)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCS
T ss_pred CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCC
Confidence 99999999999999999997532 156899999999999999999999999 9999999
Q ss_pred ccceeeCCCCCeEEccCCCcccCCC------CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCch
Q 011184 184 AYRILFDEDGNPRLSTFGLMKNSRD------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHA 256 (491)
Q Consensus 184 p~Nill~~~~~~kl~Dfgla~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~ 256 (491)
|+|||++.++.+||+|||++..... .....+|+.|+|||++.+..++.++||||||+++|+|++ |..|+....
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 281 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence 9999999999999999999865322 223457888999999998899999999999999999999 888886654
Q ss_pred hhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccC
Q 011184 257 LDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
........... .....+..++..+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 282 ~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 282 HEEVIYYVRDG-----NILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp HHHHHHHHHTT-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred hHHHHHHHhCC-----CcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 33322211111 112234566789999999999999999999999999999887654
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=357.79 Aligned_cols=256 Identities=22% Similarity=0.289 Sum_probs=212.3
Q ss_pred ccccccccCCCCCccEEEEEEEC--------CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhcc-CCCCcceEEeEeecCC
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE--------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGD 126 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~ 126 (491)
..+.+++.||+|+||+||+|... .+..||||+++..... ....+.+|+++++++ +||||+++++++..++
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 148 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 148 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC
Confidence 45778888999999999999842 2357999999765322 235788999999999 8999999999999999
Q ss_pred eeEEEEecCCCCCHHHHhcccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCC
Q 011184 127 ERLLVAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 192 (491)
Q Consensus 127 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~ 192 (491)
..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.+
T Consensus 149 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~ 227 (382)
T 3tt0_A 149 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTED 227 (382)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTT
T ss_pred ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCcceEEEcCC
Confidence 9999999999999999997532 235899999999999999999999999 9999999999999999
Q ss_pred CCeEEccCCCcccCCCC------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccc
Q 011184 193 GNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNL 265 (491)
Q Consensus 193 ~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~ 265 (491)
+.+||+|||+++..... ....+|+.|+|||++.+..++.++||||||+++|+|++ |..|+.......+.....
T Consensus 228 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~ 307 (382)
T 3tt0_A 228 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 307 (382)
T ss_dssp CCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred CcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 99999999999865432 23346788999999999899999999999999999999 888887654433322211
Q ss_pred cccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccCC
Q 011184 266 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 318 (491)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~ 318 (491)
.. .....+..++.++.+|+.+||+.||.+|||+.++++.|+.+.....
T Consensus 308 ~~-----~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 355 (382)
T 3tt0_A 308 EG-----HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 355 (382)
T ss_dssp TT-----CCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred cC-----CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 11 1223345667899999999999999999999999999999876543
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-44 Score=342.97 Aligned_cols=249 Identities=18% Similarity=0.243 Sum_probs=199.4
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
..|++++.||+|+||+||+|.. .+++.||||++....... ...+.+|+.++++++||||+++++++..++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 4678888999999999999995 468999999997544322 3678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----C
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----G 209 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~ 209 (491)
|+++ +|.+.+.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..... .
T Consensus 82 ~~~~-~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~-ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (292)
T 3o0g_A 82 FCDQ-DLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSRN-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY 158 (292)
T ss_dssp CCSE-EHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCC
T ss_pred cCCC-CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccceecCCccccc
Confidence 9985 66665543 3467999999999999999999999999 99999999999999999999999999976542 2
Q ss_pred CccccCCCCCCcccccCCC-CCCCccchhHHHHHHHHHhCCCCCCC-chhhHhhhccccc--------------cc----
Q 011184 210 KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPS-HALDLIRDRNLQM--------------LT---- 269 (491)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~-~~~~~~~~~~~~~--------------~~---- 269 (491)
....+|+.|+|||++.+.. ++.++|||||||++|+|++|..|+.. ............. ..
T Consensus 159 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 238 (292)
T 3o0g_A 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238 (292)
T ss_dssp CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCC
T ss_pred cCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccc
Confidence 3446789999999998766 79999999999999999998877533 2211111100000 00
Q ss_pred -----cccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 270 -----DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 270 -----~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
............+..+.+|+.+||+.||++|||++++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 000011123346788999999999999999999999998
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-44 Score=340.24 Aligned_cols=251 Identities=19% Similarity=0.260 Sum_probs=199.1
Q ss_pred CCccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCC----ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEE
Q 011184 55 GFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP----DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
++..+++.+.||+|+||+||+|... ++.||||+++..... ..+.+.+|+++++.++||||+++++++..++..++
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (271)
T 3dtc_A 5 DFAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCL 83 (271)
T ss_dssp CTTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEE
T ss_pred chhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence 3566788889999999999999974 789999998654322 24678999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--CcccccccccceeeCC--------CCCeEEccC
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG--RALYHDLNAYRILFDE--------DGNPRLSTF 200 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--~iiH~Dlkp~Nill~~--------~~~~kl~Df 200 (491)
||||+++++|.+++. ...+++..++.++.|++.||.|||+++ +++||||||+|||++. ++.+||+||
T Consensus 84 v~e~~~~~~L~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 84 VMEFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp EEECCTTEEHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EEEcCCCCCHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 999999999999984 467999999999999999999999986 2789999999999985 778999999
Q ss_pred CCcccCCCC--CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCC
Q 011184 201 GLMKNSRDG--KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 278 (491)
Q Consensus 201 gla~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (491)
|++...... ....||+.|+|||.+.+..++.++||||||+++|+|++|+.||.............. .......+
T Consensus 161 g~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~ 236 (271)
T 3dtc_A 161 GLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAM----NKLALPIP 236 (271)
T ss_dssp CC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHT----SCCCCCCC
T ss_pred CcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhc----CCCCCCCC
Confidence 998764432 245689999999999988899999999999999999999998876433222211111 11122344
Q ss_pred chhHHHHHHHHHHhccCCCCCCCChhHHHHHhccc
Q 011184 279 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 279 ~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~ 313 (491)
..++..+.+++.+||+.||.+|||+.++++.|+.+
T Consensus 237 ~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 237 STCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred cccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 56678999999999999999999999999999764
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-44 Score=342.99 Aligned_cols=249 Identities=19% Similarity=0.265 Sum_probs=200.5
Q ss_pred ccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCC--CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
..|++++.||+|+||+||+|...+|+.||||++..... .....+.+|+++++.++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 45788889999999999999987799999999965432 2346788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----CC
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GK 210 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~ 210 (491)
++ ++|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..... ..
T Consensus 82 ~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (288)
T 1ob3_A 82 LD-QDLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT 158 (288)
T ss_dssp CS-EEHHHHHHT-STTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred cC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEeECccccccCccccccc
Confidence 98 599998864 3467899999999999999999999999 99999999999999999999999999875432 23
Q ss_pred ccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccccc--------------c------
Q 011184 211 SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML--------------T------ 269 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~--------------~------ 269 (491)
...+|+.|+|||++.+. .++.++||||||+++|+|++|+.||................ .
T Consensus 159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T 1ob3_A 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238 (288)
T ss_dssp ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred cccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccccccc
Confidence 34679999999999764 48999999999999999999999887643221111100000 0
Q ss_pred ---cccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 270 ---DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 270 ---~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.+.....+...++.++.+|+.+||+.||++|||+.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000011123446788999999999999999999999987
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-45 Score=361.80 Aligned_cols=255 Identities=17% Similarity=0.169 Sum_probs=209.8
Q ss_pred HHHHhcCCccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCC---CCCChhHHHHHHHHHhccCCCCcceEEeEeec
Q 011184 49 LKNATSGFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 124 (491)
Q Consensus 49 ~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~ 124 (491)
+....-....+++++.||+|+||+||++... +++.||||+++.. .......+.+|+.++..++||||++++++|.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3444455667888899999999999999964 5899999998641 12234568899999999999999999999999
Q ss_pred CCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcc
Q 011184 125 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 204 (491)
Q Consensus 125 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 204 (491)
++..++||||++||+|.+++.. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CCEEEEEEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeeECCCCCEEEeccceeE
Confidence 9999999999999999999853 46899999999999999999999999 9999999999999999999999999997
Q ss_pred cCCCC-----CccccCCCCCCcccccCCC----CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccC
Q 011184 205 NSRDG-----KSYSTNLAFTPPEYLRTGR----VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 275 (491)
Q Consensus 205 ~~~~~-----~~~~~t~~y~aPE~~~~~~----~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (491)
..... ....||+.|+|||++.+.. ++.++|||||||++|||++|+.||................... ..
T Consensus 217 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~--~~ 294 (410)
T 3v8s_A 217 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSL--TF 294 (410)
T ss_dssp ECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHC--CC
T ss_pred eeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccc--cC
Confidence 65443 2557999999999998655 7889999999999999999999997665433332222211100 11
Q ss_pred CCCchhHHHHHHHHHHhccCCCCC--CCChhHHHHH
Q 011184 276 QFTDDDGTELVRLASRCLQYEPRE--RPNPKSLVTA 309 (491)
Q Consensus 276 ~~~~~~~~~~~~li~~cl~~dp~~--Rps~~~il~~ 309 (491)
.....++.++.+||.+||..+|.+ ||++++|++.
T Consensus 295 p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 295 PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp CTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred CCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 112346689999999999999988 9999999974
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-44 Score=347.86 Aligned_cols=257 Identities=14% Similarity=0.149 Sum_probs=206.7
Q ss_pred ccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCC-CCChhHHHHHHHHHhccCCCCcceEEeEeecCC--eeEEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD--ERLLVA 132 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~--~~~lv~ 132 (491)
..|.+++.||+|+||+||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 35778889999999999999964 58999999997533 234567889999999999999999999988765 789999
Q ss_pred ecCCCCCHHHHhcccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceee----CCCCCeEEccCCCcccCC
Q 011184 133 EYMPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF----DEDGNPRLSTFGLMKNSR 207 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill----~~~~~~kl~Dfgla~~~~ 207 (491)
||+++++|.+++..... ..+++..++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++...
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~ 167 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEECTTSCEEEEECCCTTCEECC
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEEeccCCCCceEEEccCCCceecC
Confidence 99999999999975322 34899999999999999999999999 9999999999999 788889999999998654
Q ss_pred CC---CccccCCCCCCccccc--------CCCCCCCccchhHHHHHHHHHhCCCCCCCchhh----Hhhhccccccc---
Q 011184 208 DG---KSYSTNLAFTPPEYLR--------TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD----LIRDRNLQMLT--- 269 (491)
Q Consensus 208 ~~---~~~~~t~~y~aPE~~~--------~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~----~~~~~~~~~~~--- 269 (491)
.. ....||+.|+|||++. +..++.++|||||||++|||++|+.||...... ..........+
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~ 247 (319)
T 4euu_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA 247 (319)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTC
T ss_pred CCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCccc
Confidence 43 2446899999999986 467899999999999999999999887532111 11100000000
Q ss_pred ----------------cccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccc
Q 011184 270 ----------------DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 314 (491)
Q Consensus 270 ----------------~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~ 314 (491)
.......++..++..+.+++.+||+.||++|||++++++....-.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred chhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 001112345678889999999999999999999999999876543
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=357.34 Aligned_cols=250 Identities=18% Similarity=0.165 Sum_probs=207.5
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
+..|++++.||+|+||+||+|.. .+|+.||+|++......+...+.+|+.+++.++||||+++++++...+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 34578888999999999999995 46899999999765433455789999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeC--CCCCeEEccCCCcccCCCCC--
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD--EDGNPRLSTFGLMKNSRDGK-- 210 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~--~~~~~kl~Dfgla~~~~~~~-- 210 (491)
++||+|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++ .++.+||+|||++.......
T Consensus 130 ~~gg~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~ 207 (387)
T 1kob_A 130 LSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHS-IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 207 (387)
T ss_dssp CCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred CCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccchHHeEEecCCCCceEEEecccceecCCCcce
Confidence 999999999864 2347899999999999999999999999 99999999999997 45789999999998765432
Q ss_pred -ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHH
Q 011184 211 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 289 (491)
Q Consensus 211 -~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 289 (491)
...||+.|+|||++.+..++.++|||||||++|+|++|..||................ ..........++.++.+||
T Consensus 208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~s~~~~~li 285 (387)
T 1kob_A 208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCD--WEFDEDAFSSVSPEAKDFI 285 (387)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCC--CCCCSSTTTTSCHHHHHHH
T ss_pred eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CCCCccccccCCHHHHHHH
Confidence 3468999999999998889999999999999999999999987654322221111110 0111223345678999999
Q ss_pred HHhccCCCCCCCChhHHHHH
Q 011184 290 SRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~ 309 (491)
.+||+.||.+|||+.++++.
T Consensus 286 ~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 286 KNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp HTTSCSSGGGSCCHHHHHTS
T ss_pred HHHcCCChhHCcCHHHHhhC
Confidence 99999999999999999973
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=353.44 Aligned_cols=244 Identities=19% Similarity=0.260 Sum_probs=206.6
Q ss_pred CccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCC---CCCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRM---AWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~l 130 (491)
...+++++.||+|+||.||++... +++.||||+++.. .......+..|..++..+ +||||+++++++...+..++
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 456788889999999999999965 4889999999643 223456788999999988 89999999999999999999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC--
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-- 208 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 208 (491)
||||++||+|.+++.. .+.+++..++.++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++....
T Consensus 99 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 175 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG 175 (353)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred EEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEEcCCCcEEEEeCCcccccccCC
Confidence 9999999999999974 356999999999999999999999999 99999999999999999999999999986322
Q ss_pred --CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHH
Q 011184 209 --GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 209 --~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.......+....... ...++..++.++.
T Consensus 176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~ 249 (353)
T 2i0e_A 176 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH------NVAYPKSMSKEAV 249 (353)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHH
T ss_pred cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHH
Confidence 23557899999999999989999999999999999999999998765443332222211 1234556778999
Q ss_pred HHHHHhccCCCCCCCC-----hhHHHH
Q 011184 287 RLASRCLQYEPRERPN-----PKSLVT 308 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps-----~~~il~ 308 (491)
+|+.+||+.||.+||+ +++|++
T Consensus 250 ~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 250 AICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp HHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred HHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 9999999999999996 466665
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-44 Score=338.91 Aligned_cols=252 Identities=23% Similarity=0.395 Sum_probs=204.9
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCCh-------hHHHHHHHHHhccCCCCcceEEeEeecCCee
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDP-------RQFLEEARSVGQLRNNRLTNLLGCCCEGDER 128 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~-------~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~ 128 (491)
..+++++.||+|+||+||+|.. .+++.||||++........ +.+.+|+.++++++||||+++++++....
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 4577788899999999999995 5689999999965443321 57899999999999999999999987665
Q ss_pred EEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCC-cccccccccceeeCCCCC-----eEEccCCC
Q 011184 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGR-ALYHDLNAYRILFDEDGN-----PRLSTFGL 202 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~-iiH~Dlkp~Nill~~~~~-----~kl~Dfgl 202 (491)
++||||+++++|.+++.. ....+++..++.++.|++.||.|||++++ ++||||||+|||++.++. +||+|||+
T Consensus 97 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~ 175 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL 175 (287)
T ss_dssp EEEEECCTTCBHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTT
T ss_pred eEEEEecCCCCHHHHHhc-ccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCc
Confidence 799999999999998865 34579999999999999999999999853 999999999999987776 99999999
Q ss_pred cccCCCC-CccccCCCCCCccccc--CCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCc
Q 011184 203 MKNSRDG-KSYSTNLAFTPPEYLR--TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 279 (491)
Q Consensus 203 a~~~~~~-~~~~~t~~y~aPE~~~--~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (491)
++..... ....+|+.|+|||++. ...++.++||||||+++|+|++|+.||.......... .............+.
T Consensus 176 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~ 253 (287)
T 4f0f_A 176 SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF--INMIREEGLRPTIPE 253 (287)
T ss_dssp CBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHH--HHHHHHSCCCCCCCT
T ss_pred cccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHH--HHHHhccCCCCCCCc
Confidence 9765443 3456899999999984 4457889999999999999999999886543221110 011111122234455
Q ss_pred hhHHHHHHHHHHhccCCCCCCCChhHHHHHhccc
Q 011184 280 DDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 280 ~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~ 313 (491)
.+++.+.+++.+||+.||.+|||+.++++.|+.+
T Consensus 254 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 254 DCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 6778999999999999999999999999998764
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-44 Score=338.12 Aligned_cols=252 Identities=22% Similarity=0.311 Sum_probs=212.3
Q ss_pred CccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
...+++++.||+|+||.||++...+++.||||++.... ...+.+.+|+++++.++||||+++++++..++..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 35677888999999999999998788899999997654 24578999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-----C
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----K 210 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~ 210 (491)
++++|.+++.. ....+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++...... .
T Consensus 86 ~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 163 (267)
T 3t9t_A 86 EHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 163 (267)
T ss_dssp TTCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred CCCcHHHHHhh-CcccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEECCCCCEEEcccccccccccccccccc
Confidence 99999999964 3456899999999999999999999999 999999999999999999999999998765332 2
Q ss_pred ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHH
Q 011184 211 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 289 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 289 (491)
...++..|+|||++.+..++.++||||||+++|+|++ |..|+............... .....+...+..+.+++
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l~~li 238 (267)
T 3t9t_A 164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-----FRLYKPRLASTHVYQIM 238 (267)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-----CCCCCCTTSCHHHHHHH
T ss_pred cccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcC-----CcCCCCccCcHHHHHHH
Confidence 3346778999999998889999999999999999999 78777654333222211111 11123445567899999
Q ss_pred HHhccCCCCCCCChhHHHHHhccccc
Q 011184 290 SRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
.+||+.||.+|||+.++++.|+.+..
T Consensus 239 ~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 239 NHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHccCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999988754
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=347.04 Aligned_cols=249 Identities=18% Similarity=0.246 Sum_probs=197.2
Q ss_pred ccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhc--cCCCCcceEEeEeec----CCeeEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQ--LRNNRLTNLLGCCCE----GDERLL 130 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~~~~~~~~----~~~~~l 130 (491)
..+++++.||+|+||+||+|.. +++.||||++... ....+.+|.+++.. ++||||+++++++.. ....++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l 83 (301)
T 3q4u_A 8 RDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83 (301)
T ss_dssp GGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred CcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence 3567888889999999999998 6889999998643 34567778887777 799999999998654 345899
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCcccccccccceeeCCCCCeEEccCCC
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT--------SKGRALYHDLNAYRILFDEDGNPRLSTFGL 202 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH--------~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 202 (491)
||||+++|+|.+++. ...+++..++.++.||+.||.||| +.+ |+||||||+|||++.++.+||+|||+
T Consensus 84 v~e~~~~g~L~~~l~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~ 159 (301)
T 3q4u_A 84 ITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA-IAHRDLKSKNILVKKNGQCCIADLGL 159 (301)
T ss_dssp EECCCTTCBHHHHHT---TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE-EECSCCCGGGEEECTTSCEEECCCTT
T ss_pred ehhhccCCCHHHHHh---hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-eecCCCChHhEEEcCCCCEEEeeCCC
Confidence 999999999999994 467999999999999999999999 888 99999999999999999999999999
Q ss_pred cccCCCC--------CccccCCCCCCcccccCC------CCCCCccchhHHHHHHHHHhC----------CCCCCCchh-
Q 011184 203 MKNSRDG--------KSYSTNLAFTPPEYLRTG------RVTPESVIYSFGTLLLDLLSG----------KHIPPSHAL- 257 (491)
Q Consensus 203 a~~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~~Dv~slG~vl~elltg----------~~~~~~~~~- 257 (491)
++..... ....||+.|+|||++.+. .++.++||||||+++|||++| ..||.....
T Consensus 160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~ 239 (301)
T 3q4u_A 160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN 239 (301)
T ss_dssp CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCC
Confidence 8653322 233689999999999876 345799999999999999999 666643211
Q ss_pred ----hHhhhcccc-ccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccc
Q 011184 258 ----DLIRDRNLQ-MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 258 ----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~ 313 (491)
......... ...........+...+..+.+|+.+||+.||.+|||+.++++.|+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 240 DPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 111111000 01111111112345778999999999999999999999999999765
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-44 Score=339.30 Aligned_cols=255 Identities=20% Similarity=0.302 Sum_probs=210.5
Q ss_pred CCccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecC--CeeEE
Q 011184 55 GFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLL 130 (491)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~--~~~~l 130 (491)
.+..+++++.||+|+||+||+|+.. ++.||||+++...... .+.+.+|+.++++++||||+++++++... +..++
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 8 DFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred CHHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 3566788899999999999999984 7899999997654322 45789999999999999999999999887 77899
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccccceeeCCCCCeEEccCCCcccCCCC
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 209 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 209 (491)
||||+++|+|.+++.......+++..++.++.||+.||.|||+.+ .++||||||+||+++.++.++|+|||++.... .
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~-~ 165 (271)
T 3kmu_A 87 ITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ-S 165 (271)
T ss_dssp EEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS-C
T ss_pred eecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeec-c
Confidence 999999999999997644446999999999999999999999974 39999999999999999999999888865533 2
Q ss_pred CccccCCCCCCcccccCCCCCC---CccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHH
Q 011184 210 KSYSTNLAFTPPEYLRTGRVTP---ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~~~~---~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
....+|+.|+|||.+.+...+. ++||||||+++|+|++|+.||.............. .......+..++..+.
T Consensus 166 ~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 241 (271)
T 3kmu_A 166 PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVAL----EGLRPTIPPGISPHVS 241 (271)
T ss_dssp TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHH----SCCCCCCCTTCCHHHH
T ss_pred cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHh----cCCCCCCCCCCCHHHH
Confidence 3456899999999998765544 79999999999999999998876543322211111 1122234556778999
Q ss_pred HHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 287 RLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
+++.+||+.||.+|||++++++.|+.+..
T Consensus 242 ~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 242 KLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 99999999999999999999999988753
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-44 Score=349.96 Aligned_cols=247 Identities=18% Similarity=0.201 Sum_probs=202.3
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCC-----CCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM-----AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
.|++++.||+|+||+||++.. .+|+.||||++... .....+.+.+|+.+++.++||||+++++++..++..++|
T Consensus 25 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 104 (351)
T 3c0i_A 25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMV 104 (351)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 478888999999999999995 46899999998531 122467899999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCC---eEEccCCCcccC
Q 011184 132 AEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN---PRLSTFGLMKNS 206 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~---~kl~Dfgla~~~ 206 (491)
|||++|++|.+++... ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++. +||+|||++...
T Consensus 105 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~ 183 (351)
T 3c0i_A 105 FEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN-IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183 (351)
T ss_dssp EECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred EeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence 9999999998877542 2346899999999999999999999999 999999999999986554 999999999765
Q ss_pred CCC----CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhH
Q 011184 207 RDG----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 282 (491)
Q Consensus 207 ~~~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (491)
... ....||+.|+|||++.+..++.++|||||||++|+|++|..||........... ...... ........++
T Consensus 184 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i-~~~~~~--~~~~~~~~~s 260 (351)
T 3c0i_A 184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGI-IKGKYK--MNPRQWSHIS 260 (351)
T ss_dssp CTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHH-HHTCCC--CCHHHHTTSC
T ss_pred cCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHH-HcCCCC--CCccccccCC
Confidence 443 234689999999999988899999999999999999999999876543222111 110000 0000012356
Q ss_pred HHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 283 TELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 283 ~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.++.+|+.+||+.||.+|||+.++++
T Consensus 261 ~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 261 ESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 78999999999999999999999987
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-44 Score=350.03 Aligned_cols=248 Identities=17% Similarity=0.250 Sum_probs=202.9
Q ss_pred CccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCC---hhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD---PRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~l 130 (491)
...+++++.||+|+||.||++... +++.||||+++...... ...+.+|+.++.++ +||||+++++++...+..++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 456788889999999999999964 58899999997543322 34578899999988 89999999999999999999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC--
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-- 208 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 208 (491)
||||++||+|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++....
T Consensus 88 v~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp EECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence 9999999999999964 357999999999999999999999999 99999999999999999999999999875322
Q ss_pred --CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhH-----hhhccccccccccccCCCCchh
Q 011184 209 --GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQMLTDSCLEGQFTDDD 281 (491)
Q Consensus 209 --~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 281 (491)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ........+... ...++...
T Consensus 165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~~~ 242 (345)
T 3a8x_A 165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--QIRIPRSL 242 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC--CCCCCTTS
T ss_pred CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC--CCCCCCCC
Confidence 234578999999999999899999999999999999999999885421100 000000111111 12345567
Q ss_pred HHHHHHHHHHhccCCCCCCCCh------hHHHH
Q 011184 282 GTELVRLASRCLQYEPRERPNP------KSLVT 308 (491)
Q Consensus 282 ~~~~~~li~~cl~~dp~~Rps~------~~il~ 308 (491)
+.++.+|+.+||+.||.+||++ .++++
T Consensus 243 s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~ 275 (345)
T 3a8x_A 243 SVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 275 (345)
T ss_dssp CHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred CHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence 7899999999999999999996 56655
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-44 Score=356.48 Aligned_cols=252 Identities=17% Similarity=0.185 Sum_probs=201.6
Q ss_pred ccccccccCCCC--CccEEEEEEEC-CCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 57 AVENIVSEHGEK--APNVVYKGKLE-NQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 57 ~~~~~i~~lG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
..|++++.||+| +||+||++... +|+.||||++....... .+.+.+|+.+++.++||||+++++++..++..++|
T Consensus 25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 104 (389)
T 3gni_B 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVV 104 (389)
T ss_dssp GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEE
Confidence 467888899999 99999999964 69999999997543222 35688899999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC----
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR---- 207 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~---- 207 (491)
|||+++++|.+++.......+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||.+....
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~ 183 (389)
T 3gni_B 105 TSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQ 183 (389)
T ss_dssp EECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCGGGCEECEETTE
T ss_pred EEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEcccccceeeccccc
Confidence 99999999999997654567999999999999999999999999 9999999999999999999999999875321
Q ss_pred -------CCCccccCCCCCCcccccC--CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccc----c----
Q 011184 208 -------DGKSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT----D---- 270 (491)
Q Consensus 208 -------~~~~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~----~---- 270 (491)
......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||................. +
T Consensus 184 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (389)
T 3gni_B 184 RQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTI 263 (389)
T ss_dssp ECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------------
T ss_pred cccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccccc
Confidence 1123367889999999987 5689999999999999999999999865322111111100000 0
Q ss_pred --------------------------------ccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 271 --------------------------------SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 271 --------------------------------~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
.......+..+++.+.+||.+||+.||.+|||+.++++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 264 PAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 000011234456789999999999999999999999974
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-44 Score=342.60 Aligned_cols=255 Identities=19% Similarity=0.304 Sum_probs=201.4
Q ss_pred CCccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 55 GFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
++..+++++.||+|+||+||++... ++.||||++... ...+.+.+|++++++++||||+++++++.+ ..++||||
T Consensus 6 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~ 80 (307)
T 2eva_A 6 DYKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEY 80 (307)
T ss_dssp CGGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEEC
T ss_pred CHhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEc
Confidence 3556788889999999999999984 688999998643 245679999999999999999999998874 47999999
Q ss_pred CCCCCHHHHhcccCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCCcccccccccceeeCCCCC-eEEccCCCcccCCC-
Q 011184 135 MPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTS---KGRALYHDLNAYRILFDEDGN-PRLSTFGLMKNSRD- 208 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~---~~~iiH~Dlkp~Nill~~~~~-~kl~Dfgla~~~~~- 208 (491)
+++++|.+++..... ..+++..++.++.|++.||.|||+ ++ |+||||||+|||++.++. +||+|||++.....
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~-ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA-LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSC-CCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCC-eecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 999999999975322 247889999999999999999999 77 999999999999998887 79999999876543
Q ss_pred CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHH
Q 011184 209 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 288 (491)
Q Consensus 209 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (491)
.....||+.|+|||++.+..++.++||||||+++|+|++|+.||.......... ..... .......+..++..+.++
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~l~~l 236 (307)
T 2eva_A 160 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRI--MWAVH-NGTRPPLIKNLPKPIESL 236 (307)
T ss_dssp -----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHH--HHHHH-TTCCCCCBTTCCHHHHHH
T ss_pred cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHH--HHHHh-cCCCCCcccccCHHHHHH
Confidence 234468999999999998899999999999999999999999886432111000 00000 011122344566789999
Q ss_pred HHHhccCCCCCCCChhHHHHHhccccccCC
Q 011184 289 ASRCLQYEPRERPNPKSLVTALSPLQKETE 318 (491)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~L~~~~~~~~ 318 (491)
+.+||+.||.+|||+.++++.|+.+.....
T Consensus 237 i~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 266 (307)
T 2eva_A 237 MTRCWSKDPSQRPSMEEIVKIMTHLMRYFP 266 (307)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred HHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence 999999999999999999999998876543
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-45 Score=352.31 Aligned_cols=253 Identities=17% Similarity=0.266 Sum_probs=204.6
Q ss_pred ccccccccCCCCCccEEEEEEEC-CCCE----EEEEEeCCCC-CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE-NQRR----IAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
..+++++.||+|+||+||+|... +++. ||+|.+.... ......+.+|+.+++.++||||+++++++. ++..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 35778889999999999999953 4544 8888875433 233467889999999999999999999986 466899
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 209 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 209 (491)
||||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 92 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 169 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQ-HRGALGPQLLLNWGVQIAKGMYYLEEHG-MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 169 (325)
T ss_dssp EEECCTTCBSHHHHHS-SGGGSCTTHHHHHHHHHHHHHHHHHHTT-CCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCT
T ss_pred EEEeCCCCCHHHHHHH-ccccCCHHHHHHHHHHHHHHHHHHHhCC-CCCCccchheEEECCCCeEEECCCCcccccCccc
Confidence 9999999999999964 2357889999999999999999999999 999999999999999999999999999865432
Q ss_pred -----CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHH
Q 011184 210 -----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 283 (491)
Q Consensus 210 -----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (491)
....+|+.|+|||++.+..++.++||||||+++|+|++ |..||.............. ......+..++.
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 244 (325)
T 3kex_A 170 KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEK-----GERLAQPQICTI 244 (325)
T ss_dssp TCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHT-----TCBCCCCTTBCT
T ss_pred ccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHc-----CCCCCCCCcCcH
Confidence 23356779999999998999999999999999999999 9988865433222211111 111223344556
Q ss_pred HHHHHHHHhccCCCCCCCChhHHHHHhccccccC
Q 011184 284 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 284 ~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
++.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 245 ~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~ 278 (325)
T 3kex_A 245 DVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 278 (325)
T ss_dssp TTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 7899999999999999999999999999886643
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-44 Score=347.08 Aligned_cols=243 Identities=18% Similarity=0.246 Sum_probs=197.7
Q ss_pred ccccccccCCCCCccEEEEEEE----CCCCEEEEEEeCCCC----CCChhHHHHHHHHHhccCCCCcceEEeEeecCCee
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL----ENQRRIAVKRFNRMA----WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 128 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~ 128 (491)
..+++++.||+|+||.||++.. .+++.||||+++... ......+.+|+.+++.++||||+++++++..++..
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 96 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL 96 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence 4578888899999999999996 468999999997643 12345688999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC
Q 011184 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 208 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 208 (491)
++||||++|++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 97 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 173 (327)
T 3a62_A 97 YLILEYLSGGELFMQLER--EGIFMEDTACFYLAEISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKESIH 173 (327)
T ss_dssp EEEEECCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTSCEEECCCSCC-----
T ss_pred EEEEeCCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCC-EEcccCCHHHeEECCCCcEEEEeCCccccccc
Confidence 999999999999999964 356899999999999999999999999 99999999999999999999999999875432
Q ss_pred ----CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHH
Q 011184 209 ----GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 284 (491)
Q Consensus 209 ----~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (491)
.....||+.|+|||++.+..++.++||||||+++|+|++|..||............... ...++..++.+
T Consensus 174 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~ 247 (327)
T 3a62_A 174 DGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC------KLNLPPYLTQE 247 (327)
T ss_dssp -----CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT------CCCCCTTSCHH
T ss_pred CCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHH
Confidence 23456899999999999888999999999999999999999998765443322221111 11234556789
Q ss_pred HHHHHHHhccCCCCCCC-----ChhHHHH
Q 011184 285 LVRLASRCLQYEPRERP-----NPKSLVT 308 (491)
Q Consensus 285 ~~~li~~cl~~dp~~Rp-----s~~~il~ 308 (491)
+.+|+.+||+.||.+|| ++.++++
T Consensus 248 ~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 248 ARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp HHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred HHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 99999999999999999 6778877
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=355.90 Aligned_cols=245 Identities=19% Similarity=0.160 Sum_probs=198.5
Q ss_pred cccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCC
Q 011184 60 NIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 138 (491)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~g 138 (491)
.....||+|+||.||+|.. .+|+.||||+++.......+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~ 171 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG 171 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 3356689999999999995 568999999997655445678999999999999999999999999999999999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceee--CCCCCeEEccCCCcccCCCC---Cccc
Q 011184 139 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF--DEDGNPRLSTFGLMKNSRDG---KSYS 213 (491)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill--~~~~~~kl~Dfgla~~~~~~---~~~~ 213 (491)
+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++..... ....
T Consensus 172 ~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~ 249 (373)
T 2x4f_A 172 ELFDRIID-ESYNLTELDTILFMKQICEGIRHMHQMY-ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF 249 (373)
T ss_dssp EEHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCC
T ss_pred cHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccccccc
Confidence 99998864 3356899999999999999999999999 9999999999999 57789999999999865443 2346
Q ss_pred cCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhc
Q 011184 214 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 293 (491)
Q Consensus 214 ~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 293 (491)
||+.|+|||++.+..++.++|||||||++|+|++|..||.................. ........+++++.+||.+||
T Consensus 250 gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~li~~~L 327 (373)
T 2x4f_A 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWD--LEDEEFQDISEEAKEFISKLL 327 (373)
T ss_dssp SSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC--SCSGGGTTSCHHHHHHHHTTS
T ss_pred CCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC--CChhhhccCCHHHHHHHHHHc
Confidence 899999999999888999999999999999999999998765433222221111110 011112345679999999999
Q ss_pred cCCCCCCCChhHHHH
Q 011184 294 QYEPRERPNPKSLVT 308 (491)
Q Consensus 294 ~~dp~~Rps~~~il~ 308 (491)
+.||.+|||+.++++
T Consensus 328 ~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 328 IKEKSWRISASEALK 342 (373)
T ss_dssp CSSGGGSCCHHHHHH
T ss_pred CCChhhCCCHHHHhc
Confidence 999999999999998
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-44 Score=347.73 Aligned_cols=253 Identities=21% Similarity=0.284 Sum_probs=209.1
Q ss_pred ccccccccCCCCCccEEEEEEE------CCCCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 129 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~ 129 (491)
..+.+.+.||+|+||.||++.. .++..||||++..... ...+.+.+|+++++.++||||+++++++...+..+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 102 (314)
T 2ivs_A 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLL 102 (314)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred hheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceE
Confidence 4567788889999999999985 2357899999975432 12457889999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHhcccCC----------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccce
Q 011184 130 LVAEYMPNETLAKHLFHWET----------------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 187 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Ni 187 (491)
+||||+++++|.+++..... ..+++..++.++.||+.||.|||+++ |+||||||+||
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dikp~NI 181 (314)
T 2ivs_A 103 LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK-LVHRDLAARNI 181 (314)
T ss_dssp EEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGE
T ss_pred EEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC-CcccccchheE
Confidence 99999999999999975322 24889999999999999999999999 99999999999
Q ss_pred eeCCCCCeEEccCCCcccCCCC------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHh
Q 011184 188 LFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLI 260 (491)
Q Consensus 188 ll~~~~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~ 260 (491)
+++.++.+||+|||++...... ....+|+.|+|||.+.+..++.++||||||+++|+|++ |..|+........
T Consensus 182 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~ 261 (314)
T 2ivs_A 182 LVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL 261 (314)
T ss_dssp EEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 9999999999999998765432 22345778999999998889999999999999999999 8888765443322
Q ss_pred hhccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 261 RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
...... ......+..++..+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 262 ~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 262 FNLLKT-----GHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp HHHHHT-----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHhhc-----CCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 211111 11223445667899999999999999999999999999988754
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-44 Score=344.30 Aligned_cols=250 Identities=19% Similarity=0.264 Sum_probs=190.0
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
..+++++.||+|+||+||+|.. .+|+.||||+++.... .....+.+|+.++++++||||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 84 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEF 84 (317)
T ss_dssp --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEEC
T ss_pred cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEe
Confidence 4567788899999999999994 4689999999975432 2356789999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccC----CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC--
Q 011184 135 MPNETLAKHLFHWE----THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-- 208 (491)
Q Consensus 135 ~~~gsL~~~l~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 208 (491)
++ ++|.+++.... ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 85 ~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 162 (317)
T 2pmi_A 85 MD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK-ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV 162 (317)
T ss_dssp CC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCSSCEETTSCC
T ss_pred cC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCChHHeEEcCCCCEEECcCccceecCCCc
Confidence 98 69999886421 245899999999999999999999999 99999999999999999999999999876532
Q ss_pred --CCccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccccc--------------cc-
Q 011184 209 --GKSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML--------------TD- 270 (491)
Q Consensus 209 --~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~--------------~~- 270 (491)
.....+|+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.............. ..
T Consensus 163 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T 2pmi_A 163 NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKY 242 (317)
T ss_dssp CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTC
T ss_pred ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhc
Confidence 2344679999999999764 58999999999999999999999987654322111110000 00
Q ss_pred -cc------------ccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 271 -SC------------LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 271 -~~------------~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.. .....+...+.++.+|+.+||+.||.+|||+.++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 243 NPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp CTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 00 000112245678999999999999999999999987
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-44 Score=340.18 Aligned_cols=253 Identities=23% Similarity=0.340 Sum_probs=210.9
Q ss_pred ccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
..+++++.||+|+||.||+|...++..||||++.... ...+.+.+|+++++.++||||+++++++.. +..++||||++
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~ 90 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYME 90 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCT
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecCC
Confidence 4577888999999999999998888899999997644 356789999999999999999999999864 56899999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-----Cc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KS 211 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 211 (491)
+++|.+++.......+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++...... ..
T Consensus 91 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 169 (279)
T 1qpc_A 91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 169 (279)
T ss_dssp TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTT
T ss_pred CCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccC
Confidence 999999996432336899999999999999999999999 999999999999999999999999998765432 22
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
..+++.|+|||.+.+..++.++||||||+++++|++ |+.|+............... .....+..++..+.+++.
T Consensus 170 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~ 244 (279)
T 1qpc_A 170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-----YRMVRPDNCPEELYQLMR 244 (279)
T ss_dssp CCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-----CCCCCCTTCCHHHHHHHH
T ss_pred CCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcc-----cCCCCcccccHHHHHHHH
Confidence 345778999999998889999999999999999999 88787654333222111111 112234456789999999
Q ss_pred HhccCCCCCCCChhHHHHHhccccccC
Q 011184 291 RCLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
+||+.||.+|||+.++++.|+.+....
T Consensus 245 ~~l~~~p~~Rps~~~l~~~l~~~~~~~ 271 (279)
T 1qpc_A 245 LCWKERPEDRPTFDYLRSVLEDFFTAT 271 (279)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HHhccChhhCCCHHHHHHHHHHHHHhc
Confidence 999999999999999999999887653
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-44 Score=363.96 Aligned_cols=244 Identities=22% Similarity=0.256 Sum_probs=199.2
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCC---CCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
...+++++.||+|+||.||++.. .+|+.||||+++.. .......+.+|+.+++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 45688889999999999999994 56899999999642 223345688999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccccceeeCCCCCeEEccCCCcccCCC--
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-- 208 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 208 (491)
|||++||+|.+++.. ...+++..+..++.||+.||.|||+ ++ |+||||||+|||++.++.+||+|||+++....
T Consensus 227 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~g-iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 303 (446)
T 4ejn_A 227 MEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 303 (446)
T ss_dssp ECCCSSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHHTC-CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred EeeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhcCC-EEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence 999999999999864 3578999999999999999999998 88 99999999999999999999999999876332
Q ss_pred --CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHH
Q 011184 209 --GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 209 --~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||............... ...++..+++++.
T Consensus 304 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~ 377 (446)
T 4ejn_A 304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------EIRFPRTLGPEAK 377 (446)
T ss_dssp ---CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHH
T ss_pred cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhC------CCCCCccCCHHHH
Confidence 23457899999999999999999999999999999999999998765443332222111 1234556778999
Q ss_pred HHHHHhccCCCCCCC-----ChhHHHH
Q 011184 287 RLASRCLQYEPRERP-----NPKSLVT 308 (491)
Q Consensus 287 ~li~~cl~~dp~~Rp-----s~~~il~ 308 (491)
+||.+||+.||.+|| +++++++
T Consensus 378 ~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 378 SLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp HHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 999999999999999 9999987
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-44 Score=342.48 Aligned_cols=253 Identities=21% Similarity=0.331 Sum_probs=213.7
Q ss_pred ccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
..+++.+.||+|+||+||+|... ++..||||++.... ...+.+.+|+.++++++||||+++++++..++..++||||+
T Consensus 13 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 91 (288)
T 3kfa_A 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 91 (288)
T ss_dssp GGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred cceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcC
Confidence 45778888999999999999965 48899999997543 34567999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-----
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----- 210 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~----- 210 (491)
+|++|.+++.......+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 92 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 170 (288)
T 3kfa_A 92 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170 (288)
T ss_dssp TTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT-CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEET
T ss_pred CCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC-ccCCCCCcceEEEcCCCCEEEccCccceeccCCcccccc
Confidence 9999999997655667999999999999999999999999 9999999999999999999999999988654332
Q ss_pred ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHH
Q 011184 211 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 289 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 289 (491)
...+|+.|+|||.+.+..++.++||||||+++|+|++ |..|+.............. ......+..+++.+.+|+
T Consensus 171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li 245 (288)
T 3kfa_A 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-----DYRMERPEGCPEKVYELM 245 (288)
T ss_dssp TEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT-----TCCCCCCTTCCHHHHHHH
T ss_pred CCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc-----cCCCCCCCCCCHHHHHHH
Confidence 2345678999999998899999999999999999999 8877765433322221111 112233456678999999
Q ss_pred HHhccCCCCCCCChhHHHHHhcccccc
Q 011184 290 SRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
.+||+.||.+|||+.++++.|+.+...
T Consensus 246 ~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 246 RACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 999999999999999999999888654
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-44 Score=343.21 Aligned_cols=256 Identities=16% Similarity=0.140 Sum_probs=208.6
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEEec
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
..+++++.||+|+||+||+|.. .+++.||||++.... ....+.+|+.+++.+ +|+||+++++++..+...++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 87 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL 87 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence 3477888889999999999994 578999999986543 345788999999999 799999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCC-----eEEccCCCcccCCCC
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN-----PRLSTFGLMKNSRDG 209 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~-----~kl~Dfgla~~~~~~ 209 (491)
+ +++|.+++.. ...++++..+..++.||+.||.|||+++ |+||||||+|||++.++. +||+|||++......
T Consensus 88 ~-~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~ 164 (298)
T 1csn_A 88 L-GPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP 164 (298)
T ss_dssp C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred c-CCCHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence 9 8999999975 3456999999999999999999999999 999999999999987766 999999998764332
Q ss_pred -----------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchh---hHhhhccccccccccccC
Q 011184 210 -----------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL---DLIRDRNLQMLTDSCLEG 275 (491)
Q Consensus 210 -----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 275 (491)
....||+.|+|||++.+..++.++||||||+++|+|++|+.||..... ............ .....
T Consensus 165 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~ 243 (298)
T 1csn_A 165 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ-STPLR 243 (298)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHH-HSCHH
T ss_pred cccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhcc-CccHH
Confidence 344689999999999988899999999999999999999998865311 100000000000 00011
Q ss_pred CCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccCC
Q 011184 276 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 318 (491)
Q Consensus 276 ~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~ 318 (491)
.....++.++.+++.+||+.||.+|||+++|++.|+.+.....
T Consensus 244 ~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 244 ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 1123456789999999999999999999999999998876543
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-44 Score=349.94 Aligned_cols=244 Identities=20% Similarity=0.245 Sum_probs=189.4
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
.+++.+.||+|+||+||+|... +++.||||+++... ..+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 54 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 131 (349)
T 2w4o_A 54 FFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVT 131 (349)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred cEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCC
Confidence 3677788899999999999965 58899999997543 34578899999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC---CCCeEEccCCCcccCCCC---C
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRDG---K 210 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~~~---~ 210 (491)
+++|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++..... .
T Consensus 132 ~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 208 (349)
T 2w4o_A 132 GGELFDRIVE--KGYYSERDAADAVKQILEAVAYLHENG-IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK 208 (349)
T ss_dssp SCBHHHHHTT--CSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESSSSTTCCEEECCCC------------
T ss_pred CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCcccEEEecCCCCCCEEEccCccccccCcccccc
Confidence 9999999963 456899999999999999999999999 999999999999975 889999999998765432 3
Q ss_pred ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhH-hhhccccccccccccCCCCchhHHHHHHHH
Q 011184 211 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-IRDRNLQMLTDSCLEGQFTDDDGTELVRLA 289 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 289 (491)
...||+.|+|||++.+..++.++|||||||++|+|++|..||....... ......... ...........+.++.+|+
T Consensus 209 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~li 286 (349)
T 2w4o_A 209 TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCE--YYFISPWWDEVSLNAKDLV 286 (349)
T ss_dssp ----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTC--CCCCTTTTTTSCHHHHHHH
T ss_pred cccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCC--CccCCchhhhCCHHHHHHH
Confidence 4568999999999998889999999999999999999999886543221 111111110 0111122345678999999
Q ss_pred HHhccCCCCCCCChhHHHH
Q 011184 290 SRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~ 308 (491)
.+||+.||++|||+.++++
T Consensus 287 ~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 287 RKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp HTTSCSSGGGSCCHHHHHH
T ss_pred HHHccCChhhCcCHHHHhc
Confidence 9999999999999999998
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-45 Score=352.71 Aligned_cols=259 Identities=21% Similarity=0.262 Sum_probs=209.4
Q ss_pred ccccccccCCCCCccEEEEEEE-----CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEee--cCCeeE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-----ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCC--EGDERL 129 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~--~~~~~~ 129 (491)
..+++++.||+|+||.||++.+ .+++.||||++........+.+.+|++++++++||||+++++++. ..+..+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 3577888999999999999984 358899999998665444567999999999999999999999886 456789
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 209 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 209 (491)
+||||+++++|.+++... ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 103 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 180 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRR-CVHRDLAARNILVESEAHVKIADFGLAKLLPLD 180 (327)
T ss_dssp EEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCGGGCEECCTT
T ss_pred EEEeecCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChhhEEECCCCCEEEcccccceecccC
Confidence 999999999999999642 346899999999999999999999999 999999999999999999999999999865432
Q ss_pred C-------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhc----------ccccccccc
Q 011184 210 K-------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR----------NLQMLTDSC 272 (491)
Q Consensus 210 ~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~----------~~~~~~~~~ 272 (491)
. ...+|+.|+|||++.+..++.++||||||+++|+|++|..|+........... .........
T Consensus 181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (327)
T 3lxl_A 181 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEG 260 (327)
T ss_dssp CSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTT
T ss_pred CccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcc
Confidence 2 23467789999999988899999999999999999999988755433211110 001111111
Q ss_pred ccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccC
Q 011184 273 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 273 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
.....+..++..+.+|+.+||+.||.+|||+.++++.|+.+....
T Consensus 261 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 261 QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred cCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 222345567789999999999999999999999999999887654
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-44 Score=349.26 Aligned_cols=244 Identities=20% Similarity=0.228 Sum_probs=203.3
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCC---hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
+.+++.||+|+||+||+|.. .+|+.||||++....... .+.+.+|++++++++||||+++++++..++..++||||
T Consensus 56 y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 135 (348)
T 1u5q_A 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 135 (348)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEec
Confidence 56778889999999999994 578999999997544322 34688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCCcccc
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST 214 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 214 (491)
+. |+|.+++.. ...++++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++..........|
T Consensus 136 ~~-g~l~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~g 212 (348)
T 1u5q_A 136 CL-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVG 212 (348)
T ss_dssp CS-EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCS
T ss_pred CC-CCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEeeccCceecCCCCcccC
Confidence 97 788887753 2467999999999999999999999999 99999999999999999999999999988777677789
Q ss_pred CCCCCCccccc---CCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 215 NLAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 215 t~~y~aPE~~~---~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
|+.|+|||++. ...++.++|||||||++|||++|+.|+............... ......+...+..+.+|+.+
T Consensus 213 t~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~ 288 (348)
T 1u5q_A 213 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----ESPALQSGHWSEYFRNFVDS 288 (348)
T ss_dssp CGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS----CCCCCCCTTSCHHHHHHHHH
T ss_pred CcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc----CCCCCCCCCCCHHHHHHHHH
Confidence 99999999985 467899999999999999999999988654322211111111 11111233456789999999
Q ss_pred hccCCCCCCCChhHHHHH
Q 011184 292 CLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~~ 309 (491)
||+.||.+|||++++++.
T Consensus 289 ~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 289 CLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp HTCSSGGGSCCHHHHTTC
T ss_pred HcccChhhCcCHHHHhhC
Confidence 999999999999999874
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-44 Score=341.13 Aligned_cols=252 Identities=20% Similarity=0.312 Sum_probs=195.1
Q ss_pred cccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 58 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
.+++++.||+|+||+||+|...+ .||||+++...... .+.+.+|+.++++++||||+++++++ ..+..++||||+
T Consensus 25 ~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~ 101 (289)
T 3og7_A 25 QITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWC 101 (289)
T ss_dssp SCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECC
T ss_pred ceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEec
Confidence 46777888999999999998643 59999997654322 35689999999999999999999965 456689999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC------C
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------G 209 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~------~ 209 (491)
++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++..... .
T Consensus 102 ~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 179 (289)
T 3og7_A 102 EGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAKS-IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF 179 (289)
T ss_dssp CEEEHHHHHTT-C---CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEECCCC--------------
T ss_pred CCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEECCCCCEEEccceeccccccccccccc
Confidence 99999999964 3467999999999999999999999999 99999999999999999999999999875432 1
Q ss_pred CccccCCCCCCccccc---CCCCCCCccchhHHHHHHHHHhCCCCCCCchhh-HhhhccccccccccccCCCCchhHHHH
Q 011184 210 KSYSTNLAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLEGQFTDDDGTEL 285 (491)
Q Consensus 210 ~~~~~t~~y~aPE~~~---~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (491)
....||+.|+|||++. +..++.++||||||+++|+|++|+.||...... .+.......... .........++..+
T Consensus 180 ~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l 258 (289)
T 3og7_A 180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS-PDLSKVRSNCPKRM 258 (289)
T ss_dssp ----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCC-CCTTSSCTTSCHHH
T ss_pred cccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccC-cchhhccccCCHHH
Confidence 2346899999999986 566888999999999999999999988653221 111111111111 11122344667899
Q ss_pred HHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 286 VRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
.+|+.+||+.||.+|||+.++++.|+.+.+
T Consensus 259 ~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 259 KRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred HHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 999999999999999999999999988754
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=349.48 Aligned_cols=257 Identities=18% Similarity=0.267 Sum_probs=196.0
Q ss_pred ccccccccCCCCCccEEEEEEECC-CC---EEEEEEeCCCCC--CChhHHHHHHHHHhccCCCCcceEEeEeecCCee--
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLEN-QR---RIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER-- 128 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~-~~---~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~-- 128 (491)
..+++++.||+|+||+||+|.... +. .||||+++.... ...+.+.+|++++++++||||+++++++...+..
T Consensus 23 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 102 (323)
T 3qup_A 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGR 102 (323)
T ss_dssp --CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-----
T ss_pred hHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccC
Confidence 346777888999999999999543 32 799999976432 2356799999999999999999999999877655
Q ss_pred ----EEEEecCCCCCHHHHhcccC----CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccC
Q 011184 129 ----LLVAEYMPNETLAKHLFHWE----THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 200 (491)
Q Consensus 129 ----~lv~e~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 200 (491)
++||||+++++|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+||
T Consensus 103 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-ivH~Dikp~NIli~~~~~~kl~Df 181 (323)
T 3qup_A 103 LPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN-FIHRDLAARNCMLAEDMTVCVADF 181 (323)
T ss_dssp --CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCC
T ss_pred CCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC-cccCCCCcceEEEcCCCCEEEeec
Confidence 99999999999999986422 225899999999999999999999999 999999999999999999999999
Q ss_pred CCcccCCCC------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccc
Q 011184 201 GLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCL 273 (491)
Q Consensus 201 gla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (491)
|+++..... ....+++.|+|||.+.+..++.++||||||+++|+|++ |..|+............... .
T Consensus 182 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~-----~ 256 (323)
T 3qup_A 182 GLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGG-----N 256 (323)
T ss_dssp CC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT-----C
T ss_pred cccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcC-----C
Confidence 998764332 23345678999999999899999999999999999999 88777654332222111111 1
Q ss_pred cCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccCCC
Q 011184 274 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 319 (491)
Q Consensus 274 ~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~ 319 (491)
....+..++.++.+|+.+||+.||.+|||+.++++.|+.+......
T Consensus 257 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~ 302 (323)
T 3qup_A 257 RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSV 302 (323)
T ss_dssp CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC---
T ss_pred CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhh
Confidence 1223455668999999999999999999999999999998876543
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-44 Score=351.28 Aligned_cols=243 Identities=20% Similarity=0.207 Sum_probs=196.2
Q ss_pred CccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCC---CChhHHHHHHHH-HhccCCCCcceEEeEeecCCeeEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW---PDPRQFLEEARS-VGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
...+++++.||+|+||.||+++.. +++.||||+++.... .....+.+|..+ ++.++||||+++++++...+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 356788889999999999999954 588999999965432 234456777776 567899999999999999999999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC---
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR--- 207 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~--- 207 (491)
||||++||+|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++...
T Consensus 117 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~ 193 (373)
T 2r5t_A 117 VLDYINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN 193 (373)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC
T ss_pred EEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEeeCccccccccCC
Confidence 9999999999999964 356899999999999999999999999 9999999999999999999999999987532
Q ss_pred -CCCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHH
Q 011184 208 -DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 208 -~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
......||+.|+|||++.+..++.++|||||||++|||++|..||.......+....... ...++..++..+.
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~ 267 (373)
T 2r5t_A 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK------PLQLKPNITNSAR 267 (373)
T ss_dssp CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHS------CCCCCSSSCHHHH
T ss_pred CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc------ccCCCCCCCHHHH
Confidence 234567899999999999989999999999999999999999998765544333222221 1134456778999
Q ss_pred HHHHHhccCCCCCCCChhHHH
Q 011184 287 RLASRCLQYEPRERPNPKSLV 307 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il 307 (491)
+||.+||+.||.+||++.+.+
T Consensus 268 ~li~~lL~~dp~~R~~~~~~~ 288 (373)
T 2r5t_A 268 HLLEGLLQKDRTKRLGAKDDF 288 (373)
T ss_dssp HHHHHHTCSSGGGSTTTTTTH
T ss_pred HHHHHHcccCHHhCCCCCCCH
Confidence 999999999999999985433
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-44 Score=359.23 Aligned_cols=252 Identities=18% Similarity=0.158 Sum_probs=206.1
Q ss_pred CCccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCC---CCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEE
Q 011184 55 GFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
....+++++.||+|+||+||+++.. +++.||||+++.. .......+.+|+.++..++||||++++++|.+++..++
T Consensus 72 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~l 151 (437)
T 4aw2_A 72 HREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYL 151 (437)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEE
T ss_pred ChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEE
Confidence 3456777888899999999999965 4789999999642 12234458899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 209 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 209 (491)
||||++||+|.+++.. ....+++..+..++.||+.||.|||+.+ ||||||||+|||++.++.+||+|||+++.....
T Consensus 152 V~Ey~~gg~L~~~l~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~ 229 (437)
T 4aw2_A 152 VMDYYVGGDLLTLLSK-FEDRLPEEMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 229 (437)
T ss_dssp EECCCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred EEecCCCCcHHHHHHH-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecccCHHHeeEcCCCCEEEcchhhhhhcccCC
Confidence 9999999999999974 2467999999999999999999999999 999999999999999999999999999765432
Q ss_pred ----CccccCCCCCCccccc-----CCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCch
Q 011184 210 ----KSYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 280 (491)
Q Consensus 210 ----~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (491)
....||+.|+|||++. ...++.++|||||||++|||++|+.||................... ..+.....
T Consensus 230 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~-~~p~~~~~ 308 (437)
T 4aw2_A 230 TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERF-QFPTQVTD 308 (437)
T ss_dssp CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHC-CCCSSCCC
T ss_pred CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccc-cCCccccc
Confidence 2357899999999987 4568999999999999999999999997665433322222111100 11112234
Q ss_pred hHHHHHHHHHHhccCCCCC--CCChhHHHHH
Q 011184 281 DGTELVRLASRCLQYEPRE--RPNPKSLVTA 309 (491)
Q Consensus 281 ~~~~~~~li~~cl~~dp~~--Rps~~~il~~ 309 (491)
+++++.+||.+||..+|++ ||+++++++.
T Consensus 309 ~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 309 VSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp SCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred CCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 6789999999999988888 9999999973
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-44 Score=369.28 Aligned_cols=253 Identities=24% Similarity=0.336 Sum_probs=212.3
Q ss_pred ccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
..+++...||+|+||.||+|.+.++..||||+++... ...+.|.+|+++|++++||||+++++++.. +..+|||||++
T Consensus 267 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~ 344 (535)
T 2h8h_A 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 344 (535)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred hhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhc
Confidence 3466778899999999999998888889999998654 346789999999999999999999999876 67899999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-----Cc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KS 211 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 211 (491)
+|+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 345 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~ 423 (535)
T 2h8h_A 345 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 423 (535)
T ss_dssp TEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCS
T ss_pred CCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccC
Confidence 999999997533456899999999999999999999999 999999999999999999999999999865432 23
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
..++..|+|||++.+..++.++|||||||++|||++ |+.|+.......+....... .....+..++..+.+||.
T Consensus 424 ~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l~~li~ 498 (535)
T 2h8h_A 424 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-----YRMPCPPECPESLHDLMC 498 (535)
T ss_dssp TTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTT-----CCCCCCTTCCHHHHHHHH
T ss_pred CcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHHHHH
Confidence 345678999999998899999999999999999999 88888664433222211111 112234566789999999
Q ss_pred HhccCCCCCCCChhHHHHHhccccccC
Q 011184 291 RCLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
+||+.||++|||+++|++.|+.+....
T Consensus 499 ~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 499 QCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred HHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 999999999999999999999987654
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-44 Score=349.47 Aligned_cols=251 Identities=18% Similarity=0.260 Sum_probs=201.1
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCE----EEEEEeCCCC-CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRR----IAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
.+++++.||+|+||+||+|... +++. ||+|.+.... ....+.+.+|+.++++++||||++++++|..+. .++|
T Consensus 16 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v 94 (327)
T 3poz_A 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLI 94 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEE
T ss_pred HcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEE
Confidence 4677888899999999999953 4443 5888876433 234678999999999999999999999998754 7899
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC--
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 209 (491)
+||+++|+|.+++.. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 95 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 172 (327)
T 3poz_A 95 TQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172 (327)
T ss_dssp EECCTTCBHHHHHHH-STTSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC
T ss_pred EEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCChheEEECCCCCEEEccCcceeEccCCcc
Confidence 999999999999975 3467999999999999999999999999 999999999999999999999999998754322
Q ss_pred ----CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHH
Q 011184 210 ----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 284 (491)
Q Consensus 210 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (491)
....+|+.|+|||++.+..++.++||||||+++|||++ |+.||.......+.... ........+..++..
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 247 (327)
T 3poz_A 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-----EKGERLPQPPICTID 247 (327)
T ss_dssp -------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH-----HTTCCCCCCTTBCHH
T ss_pred cccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHH-----HcCCCCCCCccCCHH
Confidence 12345778999999999999999999999999999999 88888654333222111 111122234556789
Q ss_pred HHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 285 LVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 285 ~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 248 ~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 248 VYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 99999999999999999999999999888654
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-44 Score=346.89 Aligned_cols=244 Identities=17% Similarity=0.264 Sum_probs=194.5
Q ss_pred ccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCC--------
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGD-------- 126 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~-------- 126 (491)
..+++++.||+|+||.||+|... +|+.||||+++..... ..+.+.+|+.++++++||||++++++|.+.+
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 35678888899999999999965 7999999999754432 3567999999999999999999999986543
Q ss_pred -------------------------------------------------eeEEEEecCCCCCHHHHhcccCC-CCCCHHH
Q 011184 127 -------------------------------------------------ERLLVAEYMPNETLAKHLFHWET-HPMKWAM 156 (491)
Q Consensus 127 -------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~-~~l~~~~ 156 (491)
..++||||++|++|.+++..... ...++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~ 165 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV 165 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence 37999999999999999975332 2456777
Q ss_pred HHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----------------CccccCCCCCC
Q 011184 157 RLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----------------KSYSTNLAFTP 220 (491)
Q Consensus 157 ~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----------------~~~~~t~~y~a 220 (491)
++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|+|
T Consensus 166 ~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 244 (332)
T 3qd2_B 166 CLHIFIQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS 244 (332)
T ss_dssp HHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred HHHHHHHHHHHHHHHHhCC-eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence 8999999999999999999 999999999999999999999999998765432 23458999999
Q ss_pred cccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCCCCCC
Q 011184 221 PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 300 (491)
Q Consensus 221 PE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R 300 (491)
||++.+..++.++||||||+++|+|++|..|+.... ..... .... .........++.+.+|+.+||+.||.+|
T Consensus 245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~-~~~~~-~~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~R 317 (332)
T 3qd2_B 245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV-RIITD-VRNL-----KFPLLFTQKYPQEHMMVQDMLSPSPTER 317 (332)
T ss_dssp HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH-HHHHH-HHTT-----CCCHHHHHHCHHHHHHHHHHHCSSGGGS
T ss_pred hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH-HHHHH-hhcc-----CCCcccccCChhHHHHHHHHccCCCCcC
Confidence 999999899999999999999999999875432111 11100 0000 0001122345678999999999999999
Q ss_pred CChhHHHH
Q 011184 301 PNPKSLVT 308 (491)
Q Consensus 301 ps~~~il~ 308 (491)
||+.++++
T Consensus 318 ps~~~~l~ 325 (332)
T 3qd2_B 318 PEATDIIE 325 (332)
T ss_dssp CCHHHHHH
T ss_pred CCHHHHhh
Confidence 99999997
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-44 Score=360.11 Aligned_cols=244 Identities=19% Similarity=0.263 Sum_probs=207.1
Q ss_pred CccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
...|.+++.||+|+||.||+|... +|+.||||++.... ......+.+|+.+++.++||||+++++++...+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 345788889999999999999964 69999999996432 22356789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC--
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 209 (491)
|||++||+|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 95 ~E~~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~ 171 (476)
T 2y94_A 95 MEYVSGGELFDYICK--NGRLDEKESRRLFQQILSGVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 171 (476)
T ss_dssp EECCSSEEHHHHTTS--SSSCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC
T ss_pred EeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcccccHHHEEEecCCCeEEEeccchhhcccccc
Confidence 999999999999963 467999999999999999999999999 999999999999999999999999999875443
Q ss_pred -CccccCCCCCCcccccCCCC-CCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHH
Q 011184 210 -KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 287 (491)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (491)
....||+.|+|||++.+..+ +.++|||||||++|+|++|..||................ ...+..+++++.+
T Consensus 172 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~------~~~p~~~s~~~~~ 245 (476)
T 2y94_A 172 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI------FYTPQYLNPSVIS 245 (476)
T ss_dssp BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTC------CCCCTTCCHHHHH
T ss_pred ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCC------cCCCccCCHHHHH
Confidence 34578999999999988765 679999999999999999999987654433322221111 1234456678999
Q ss_pred HHHHhccCCCCCCCChhHHHH
Q 011184 288 LASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~ 308 (491)
|+.+||+.||.+|||+.++++
T Consensus 246 Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 246 LLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp HHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHcCCCchhCcCHHHHHh
Confidence 999999999999999999997
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-44 Score=351.05 Aligned_cols=256 Identities=20% Similarity=0.269 Sum_probs=205.9
Q ss_pred ccccccccCCCCCccEEEEEEE------CCCCEEEEEEeCCCC-CCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCee
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDER 128 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~ 128 (491)
..+++++.||+|+||+||+|.. .++..||||++.... ....+.+.+|+.++.++ +||||+++++++...+..
T Consensus 45 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 124 (344)
T 1rjb_A 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI 124 (344)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCcc
Confidence 4567888889999999999995 235689999997543 23456799999999999 899999999999999999
Q ss_pred EEEEecCCCCCHHHHhcccCC---------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccce
Q 011184 129 LLVAEYMPNETLAKHLFHWET---------------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 187 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Ni 187 (491)
++||||+++|+|.+++..... ..+++..++.++.||+.||.|||+++ |+||||||+||
T Consensus 125 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NI 203 (344)
T 1rjb_A 125 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAARNV 203 (344)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGGE
T ss_pred EEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhhE
Confidence 999999999999999975322 23789999999999999999999999 99999999999
Q ss_pred eeCCCCCeEEccCCCcccCCCCC------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHh
Q 011184 188 LFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLI 260 (491)
Q Consensus 188 ll~~~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~ 260 (491)
|++.++.+||+|||++....... ...+|+.|+|||++.+..++.++||||||+++|+|+| |..||........
T Consensus 204 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~ 283 (344)
T 1rjb_A 204 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN 283 (344)
T ss_dssp EEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred EEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHH
Confidence 99999999999999987543321 2345778999999998899999999999999999998 8888765432211
Q ss_pred hhccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccC
Q 011184 261 RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
.... .........+...+.++.+|+.+||+.||.+|||+.++++.|+.+....
T Consensus 284 ~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 284 FYKL----IQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp HHHH----HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred HHHH----HhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 1111 1111122334456789999999999999999999999999999887643
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-43 Score=339.13 Aligned_cols=250 Identities=16% Similarity=0.192 Sum_probs=200.5
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC-----CCChhHHHHHHHHHhccC---CCCcceEEeEeecCC-
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA-----WPDPRQFLEEARSVGQLR---NNRLTNLLGCCCEGD- 126 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~---H~niv~~~~~~~~~~- 126 (491)
..|++++.||+|+||+||+|.. .+++.||||++.... ......+.+|+.+++.++ ||||+++++++....
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~ 88 (308)
T 3g33_A 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRT 88 (308)
T ss_dssp -CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCS
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCC
Confidence 3567888889999999999994 568999999986422 112456788888888775 999999999998765
Q ss_pred ----eeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCC
Q 011184 127 ----ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 202 (491)
Q Consensus 127 ----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 202 (491)
..++||||+. ++|.+++.......+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 166 (308)
T 3g33_A 89 DREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGTVKLADFGL 166 (308)
T ss_dssp SSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred CCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCEEEeeCcc
Confidence 4799999997 69999997654455999999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCC---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccccccc---------
Q 011184 203 MKNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD--------- 270 (491)
Q Consensus 203 a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~--------- 270 (491)
+...... ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||..................
T Consensus 167 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 246 (308)
T 3g33_A 167 ARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD 246 (308)
T ss_dssp TTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSS
T ss_pred ccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccch
Confidence 9765433 3456899999999999999999999999999999999999998765433222111110000
Q ss_pred -----cccc-------CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 271 -----SCLE-------GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 271 -----~~~~-------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.... ......++..+.+|+.+||+.||.+|||+.++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 247 VSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 0000 0011345678999999999999999999999987
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=342.16 Aligned_cols=259 Identities=18% Similarity=0.221 Sum_probs=204.8
Q ss_pred hcCCccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCC---hhHHHHHHHHHhccCCCCcceEEeEeecCCee
Q 011184 53 TSGFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 128 (491)
Q Consensus 53 ~~~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~ 128 (491)
...+..|++++.||+|+||.||++... +++.||||++....... .+.+.+|+.++++++||||+++++++..++..
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~ 109 (309)
T 2h34_A 30 GTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQL 109 (309)
T ss_dssp ----CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEE
T ss_pred CcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeE
Confidence 344678889999999999999999954 68899999997543322 35788999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC
Q 011184 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 208 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 208 (491)
++||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 110 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 186 (309)
T 2h34_A 110 YVDMRLINGVDLAAMLRR--QGPLAPPRAVAIVRQIGSALDAAHAAG-ATHRDVKPENILVSADDFAYLVDFGIASATTD 186 (309)
T ss_dssp EEEEECCCCEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSCCC------
T ss_pred EEEEEecCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCc-CCcCCCChHHEEEcCCCCEEEecCccCccccc
Confidence 999999999999999974 356899999999999999999999999 99999999999999999999999999876543
Q ss_pred C-----CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHH
Q 011184 209 G-----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 283 (491)
Q Consensus 209 ~-----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (491)
. ....+++.|+|||.+.+..++.++||||||+++|+|++|+.||.................. ....+..++.
T Consensus 187 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 263 (309)
T 2h34_A 187 EKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPR---PSTVRPGIPV 263 (309)
T ss_dssp ----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCC---GGGTSTTCCT
T ss_pred cccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCC---ccccCCCCCH
Confidence 2 2346789999999999888999999999999999999999998776544332221111111 1123445667
Q ss_pred HHHHHHHHhccCCCCCCC-ChhHHHHHhccccccC
Q 011184 284 ELVRLASRCLQYEPRERP-NPKSLVTALSPLQKET 317 (491)
Q Consensus 284 ~~~~li~~cl~~dp~~Rp-s~~~il~~L~~~~~~~ 317 (491)
.+.+++.+||+.||.+|| +++++++.|+......
T Consensus 264 ~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 264 AFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp HHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred HHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 899999999999999999 9999999998876543
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-44 Score=354.66 Aligned_cols=255 Identities=22% Similarity=0.298 Sum_probs=206.3
Q ss_pred CccccccccCCCCCccEEEEEEE------CCCCEEEEEEeCCCCCC-ChhHHHHHHHHHhcc-CCCCcceEEeEeecCC-
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGD- 126 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~- 126 (491)
...+++++.||+|+||.||+|.+ .+++.||||+++..... ..+.+.+|++++.++ +||||+++++++...+
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 100 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 100 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCC
Confidence 35677888889999999999983 23578999999754322 235699999999999 7999999999998765
Q ss_pred eeEEEEecCCCCCHHHHhcccCC---------------------------------------------------------
Q 011184 127 ERLLVAEYMPNETLAKHLFHWET--------------------------------------------------------- 149 (491)
Q Consensus 127 ~~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------------------- 149 (491)
..++||||++||+|.+++.....
T Consensus 101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (359)
T 3vhe_A 101 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 180 (359)
T ss_dssp CCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------------
T ss_pred ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcc
Confidence 48999999999999999975321
Q ss_pred -------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC------CccccCC
Q 011184 150 -------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNL 216 (491)
Q Consensus 150 -------~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------~~~~~t~ 216 (491)
..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++...... ....+|+
T Consensus 181 ~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~ 259 (359)
T 3vhe_A 181 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 259 (359)
T ss_dssp ---CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECG
T ss_pred cccchhccccCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCc
Confidence 12889999999999999999999999 999999999999999999999999999765332 2335678
Q ss_pred CCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccC
Q 011184 217 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 295 (491)
Q Consensus 217 ~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~ 295 (491)
.|+|||++.+..++.++||||||+++|+|++ |..||.............. .......+...++++.+++.+||+.
T Consensus 260 ~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~li~~~l~~ 335 (359)
T 3vhe_A 260 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK----EGTRMRAPDYTTPEMYQTMLDCWHG 335 (359)
T ss_dssp GGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH----HTCCCCCCTTCCHHHHHHHHHHTCS
T ss_pred eeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHH----cCCCCCCCCCCCHHHHHHHHHHccC
Confidence 8999999998899999999999999999998 9988865432211111111 1112233455668899999999999
Q ss_pred CCCCCCChhHHHHHhccccc
Q 011184 296 EPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 296 dp~~Rps~~~il~~L~~~~~ 315 (491)
||.+|||+.++++.|+.+..
T Consensus 336 dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 336 EPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp SGGGSCCHHHHHHHHHHHHH
T ss_pred ChhhCCCHHHHHHHHHHHHH
Confidence 99999999999999988764
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-44 Score=340.19 Aligned_cols=251 Identities=20% Similarity=0.262 Sum_probs=197.0
Q ss_pred ccccccccCCCCCccEEEEEEECC----CCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLEN----QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
..+++++.||+|+||.||+|.... +..||||++...... ..+.+.+|+.++++++||||+++++++. ++..++|
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv 93 (281)
T 1mp8_A 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 93 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEE
Confidence 457788889999999999999632 456999998754322 2457889999999999999999999984 4678999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 210 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 210 (491)
|||+++++|.+++.. ....+++..++.++.|++.||.|||+++ ++||||||+|||++.++.+||+|||++.......
T Consensus 94 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 171 (281)
T 1mp8_A 94 MELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 171 (281)
T ss_dssp EECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECC------------
T ss_pred EecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccccHHHEEECCCCCEEECccccccccCcccc
Confidence 999999999999964 3456899999999999999999999999 9999999999999999999999999987654322
Q ss_pred ----ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHH
Q 011184 211 ----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 285 (491)
Q Consensus 211 ----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (491)
...+|+.|+|||++.+..++.++||||||+++|+|++ |..||.............. ......+..+++.+
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~-----~~~~~~~~~~~~~l 246 (281)
T 1mp8_A 172 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN-----GERLPMPPNCPPTL 246 (281)
T ss_dssp -------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT-----TCCCCCCTTCCHHH
T ss_pred cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHc-----CCCCCCCCCCCHHH
Confidence 2345678999999998889999999999999999997 8878765432222111111 11122445677899
Q ss_pred HHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 286 VRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 247 ~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 247 YSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 999999999999999999999999988754
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-44 Score=355.55 Aligned_cols=247 Identities=14% Similarity=0.132 Sum_probs=192.5
Q ss_pred cccccc-ccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhcc-CCCCcceEEeEeec----CCeeE
Q 011184 57 AVENIV-SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCE----GDERL 129 (491)
Q Consensus 57 ~~~~~i-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~----~~~~~ 129 (491)
..+.++ ..||.|+||+||++.. .+|+.||||++.. ...+.+|++++.++ +||||+++++++.. .+..+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 345555 5789999999999995 4689999999853 35678899988554 89999999999865 56789
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC---CCCeEEccCCCcccC
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNS 206 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla~~~ 206 (491)
|||||++||+|.+++.......+++..+..|+.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++..
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~ 214 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 214 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCcceEEEecCCCCccEEEEeccccccc
Confidence 9999999999999997644457999999999999999999999999 999999999999987 789999999999865
Q ss_pred CCC---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccc--cccCCCCchh
Q 011184 207 RDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS--CLEGQFTDDD 281 (491)
Q Consensus 207 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 281 (491)
... ....||+.|+|||++.+..++.++|||||||++|+|++|..||...............+... .........+
T Consensus 215 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 294 (400)
T 1nxk_A 215 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 294 (400)
T ss_dssp C-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTS
T ss_pred CCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccC
Confidence 432 34567999999999998899999999999999999999999886543211100000000000 0111112356
Q ss_pred HHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 282 GTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 282 ~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
+.++.+||.+||+.||.+|||+.++++.
T Consensus 295 s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 295 SEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 7899999999999999999999999984
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-44 Score=347.17 Aligned_cols=256 Identities=22% Similarity=0.313 Sum_probs=208.8
Q ss_pred ccccccCCCCCccEEEEEEEC-----CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecC--CeeEE
Q 011184 59 ENIVSEHGEKAPNVVYKGKLE-----NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLL 130 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--~~~~l 130 (491)
+++++.||+|+||+||++.+. +++.||||+++..... ....+.+|++++++++||||+++++++... ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 478889999999999988642 5789999999765321 245689999999999999999999999874 67899
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 210 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~ 210 (491)
||||+++++|.+++.. ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 113 v~e~~~~~~L~~~l~~---~~~~~~~~~~i~~~l~~~l~~LH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 188 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLHAQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 188 (318)
T ss_dssp EECCCTTCBHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECCTTC
T ss_pred EEecccCCcHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEEcCCCCEEECCccccccccccc
Confidence 9999999999999953 45999999999999999999999999 9999999999999999999999999998654432
Q ss_pred -------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhh----------hccccccccccc
Q 011184 211 -------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR----------DRNLQMLTDSCL 273 (491)
Q Consensus 211 -------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~----------~~~~~~~~~~~~ 273 (491)
...+|..|+|||++.+..++.++||||||+++|+|++|..|+......... ............
T Consensus 189 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (318)
T 3lxp_A 189 EYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGE 268 (318)
T ss_dssp SEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred cccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhccc
Confidence 334677899999999888999999999999999999999887543221100 001111111222
Q ss_pred cCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccCC
Q 011184 274 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 318 (491)
Q Consensus 274 ~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~ 318 (491)
....+..++..+.+|+.+||+.||.+|||+.++++.|+.+.....
T Consensus 269 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 313 (318)
T 3lxp_A 269 RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313 (318)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence 233455677899999999999999999999999999998876543
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-44 Score=343.77 Aligned_cols=255 Identities=18% Similarity=0.299 Sum_probs=204.6
Q ss_pred cccccccCCCCCccEEEEEEE-----CCCCEEEEEEeCCCC-CCChhHHHHHHHHHhccCCCCcceEEeEeecC--CeeE
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-----ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERL 129 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~--~~~~ 129 (491)
.+++++.||+|+||.||++.+ .+++.||||++.... ......+.+|+.+++.++||||+++++++... +..+
T Consensus 22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 101 (302)
T 4e5w_A 22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 101 (302)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEE
T ss_pred hhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEE
Confidence 367788899999999999984 358899999997543 23457899999999999999999999999876 6689
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 209 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 209 (491)
+||||+++++|.+++.. ....+++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 102 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 179 (302)
T 4e5w_A 102 LIMEFLPSGSLKEYLPK-NKNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 179 (302)
T ss_dssp EEEECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred EEEEeCCCCcHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHhhcCC-cccCCCchheEEEcCCCCEEECcccccccccCC
Confidence 99999999999999954 3456999999999999999999999999 999999999999999999999999999765433
Q ss_pred C-------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhh----------hcccccccccc
Q 011184 210 K-------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR----------DRNLQMLTDSC 272 (491)
Q Consensus 210 ~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~----------~~~~~~~~~~~ 272 (491)
. ...+|..|+|||++.+..++.++||||||+++|+|++|..|+......... ...........
T Consensus 180 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (302)
T 4e5w_A 180 KEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEG 259 (302)
T ss_dssp CCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTT
T ss_pred CcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhcc
Confidence 2 335677899999999888999999999999999999998764322111000 00000111111
Q ss_pred ccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccc
Q 011184 273 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 314 (491)
Q Consensus 273 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~ 314 (491)
.....+..+++.+.+|+.+||+.||.+|||+.++++.|+.+.
T Consensus 260 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 260 KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 122345567789999999999999999999999999998764
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-44 Score=338.90 Aligned_cols=251 Identities=25% Similarity=0.354 Sum_probs=202.4
Q ss_pred CccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecC-CeeEEEEec
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG-DERLLVAEY 134 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~-~~~~lv~e~ 134 (491)
+..+++++.||+|+||+||++.. +|+.||||+++... ..+.+.+|+.++++++||||+++++++... +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 45678889999999999999987 47899999997543 567899999999999999999999997654 478999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-Cccc
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYS 213 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~ 213 (491)
+++++|.+++.......+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++...... ....
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 175 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 175 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCCcceEEEeCCCcEEEeeccccccccccccCCC
Confidence 99999999997533334889999999999999999999999 999999999999999999999999998765432 2345
Q ss_pred cCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 011184 214 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 292 (491)
Q Consensus 214 ~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 292 (491)
+++.|+|||.+.+..++.++||||||+++|+|++ |..|+............... .....+..+++.+.+++.+|
T Consensus 176 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~ 250 (278)
T 1byg_A 176 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-----YKMDAPDGCPPAVYEVMKNC 250 (278)
T ss_dssp CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTT-----CCCCCCTTCCHHHHHHHHHH
T ss_pred ccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC-----CCCCCcccCCHHHHHHHHHH
Confidence 6889999999998889999999999999999998 88887654332222111111 12234456678999999999
Q ss_pred ccCCCCCCCChhHHHHHhccccc
Q 011184 293 LQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 293 l~~dp~~Rps~~~il~~L~~~~~ 315 (491)
|+.||.+|||+.++++.|+.+..
T Consensus 251 l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 251 WHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcCChhhCCCHHHHHHHHHHHHh
Confidence 99999999999999999988754
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=342.95 Aligned_cols=246 Identities=17% Similarity=0.192 Sum_probs=204.8
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCC------ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP------DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
.|++++.||+|+||.||++... +|+.||||++...... ..+.+.+|+.+++.++||||+++++++...+..++
T Consensus 13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (321)
T 2a2a_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVL 92 (321)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 4678888899999999999954 6899999999654322 25679999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC----CeEEccCCCcccC
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG----NPRLSTFGLMKNS 206 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfgla~~~ 206 (491)
||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ ++||||||+||+++.++ .+||+|||++...
T Consensus 93 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~-ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~ 169 (321)
T 2a2a_A 93 ILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169 (321)
T ss_dssp EECCCCSCBHHHHHHT--CSCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCTTCEEC
T ss_pred EEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCChHHEEEecCCCCcCCEEEccCccceec
Confidence 9999999999999963 457899999999999999999999999 99999999999999887 7999999999765
Q ss_pred CCC---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHH
Q 011184 207 RDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 283 (491)
Q Consensus 207 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (491)
... ....||+.|+|||++.+..++.++||||||+++|+|++|..||.................. .....+...+.
T Consensus 170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~ 247 (321)
T 2a2a_A 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD--FDEEFFSHTSE 247 (321)
T ss_dssp CTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC--CCHHHHTTCCH
T ss_pred CccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccc--cChhhhcccCH
Confidence 443 3446899999999999889999999999999999999999998765433222211111000 00011124557
Q ss_pred HHHHHHHHhccCCCCCCCChhHHHH
Q 011184 284 ELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 284 ~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.+.+|+.+||+.||.+|||+.++++
T Consensus 248 ~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 248 LAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp HHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhc
Confidence 8999999999999999999999998
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-43 Score=344.23 Aligned_cols=253 Identities=21% Similarity=0.281 Sum_probs=203.5
Q ss_pred cccccccCCCCCccEEEEEEECC-----CCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLEN-----QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
.+.+.+.||+|+||+||+|.... +..||||+++..... ....+.+|+.+++.++||||+++++++...+..++|
T Consensus 45 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 124 (333)
T 1mqb_A 45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII 124 (333)
T ss_dssp TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEE
Confidence 45667788999999999998532 235999999754322 234688999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 210 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 210 (491)
|||+++++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 125 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 202 (333)
T 1mqb_A 125 TEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 202 (333)
T ss_dssp EECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred EeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChheEEECCCCcEEECCCCcchhhccccc
Confidence 999999999999964 3467999999999999999999999999 9999999999999999999999999987654321
Q ss_pred ------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHH
Q 011184 211 ------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 283 (491)
Q Consensus 211 ------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (491)
...+|+.|+|||++.+..++.++||||||+++|+|++ |..|+.......+....... .....+..++.
T Consensus 203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 277 (333)
T 1mqb_A 203 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG-----FRLPTPMDCPS 277 (333)
T ss_dssp --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-----CCCCCCTTCBH
T ss_pred cccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCC-----CcCCCcccCCH
Confidence 2234678999999998899999999999999999999 98888654333222211111 11123445678
Q ss_pred HHHHHHHHhccCCCCCCCChhHHHHHhccccccC
Q 011184 284 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 284 ~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
.+.+++.+||+.||.+||++.++++.|+.+....
T Consensus 278 ~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 278 AIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 8999999999999999999999999999887653
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-44 Score=342.72 Aligned_cols=239 Identities=21% Similarity=0.242 Sum_probs=194.3
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCC--hhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEEe
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD--PRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e 133 (491)
.+++++.||+|+||+||+|... +|+.||||++....... ...+..|+..+..+ +||||++++++|..++..++|||
T Consensus 58 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e 137 (311)
T 3p1a_A 58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTE 137 (311)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred heeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEe
Confidence 4677788899999999999965 69999999986543322 23455666666665 89999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC---C
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---K 210 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---~ 210 (491)
|+ +++|.+++... ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++...... .
T Consensus 138 ~~-~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 214 (311)
T 3p1a_A 138 LC-GPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLHSQG-LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGE 214 (311)
T ss_dssp CC-CCBHHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECGGGCEEECCCTTCEECC------
T ss_pred cc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEECCCCCEEEccceeeeecccCCCCc
Confidence 99 68999988653 457999999999999999999999999 999999999999999999999999998765432 3
Q ss_pred ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchh-hHhhhccccccccccccCCCCchhHHHHHHHH
Q 011184 211 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 289 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 289 (491)
...||+.|+|||++.+ .++.++|||||||++|||++|..++..... ..+.... ....++..++.++.+|+
T Consensus 215 ~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~li 285 (311)
T 3p1a_A 215 VQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGY--------LPPEFTAGLSSELRSVL 285 (311)
T ss_dssp CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTTC--------CCHHHHTTSCHHHHHHH
T ss_pred ccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhccC--------CCcccccCCCHHHHHHH
Confidence 4468999999999885 789999999999999999999876654322 1111111 11112234567899999
Q ss_pred HHhccCCCCCCCChhHHHH
Q 011184 290 SRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~ 308 (491)
.+||+.||++|||+.++++
T Consensus 286 ~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 286 VMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp HHHSCSSTTTSCCHHHHHT
T ss_pred HHHcCCChhhCcCHHHHHh
Confidence 9999999999999999997
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-44 Score=339.05 Aligned_cols=255 Identities=20% Similarity=0.252 Sum_probs=209.9
Q ss_pred cccccc-cCCCCCccEEEEEEEC---CCCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 58 VENIVS-EHGEKAPNVVYKGKLE---NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 58 ~~~~i~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
.+.+++ .||+|+||.||+|... ++..||||+++.... ...+.+.+|+++++.++||||+++++++ ..+..++||
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~ 88 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVM 88 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEE
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEE
Confidence 345566 7899999999999853 577899999976432 2345789999999999999999999999 456689999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC---
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 209 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 209 (491)
||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 89 e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 166 (287)
T 1u59_A 89 EMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY 166 (287)
T ss_dssp ECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred EeCCCCCHHHHHHh-CCccCCHHHHHHHHHHHHHHHHHHHHCC-EeeCCCchheEEEcCCCCEEECcccceeeeccCcce
Confidence 99999999999964 3456999999999999999999999999 999999999999999999999999998765432
Q ss_pred ----CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHH
Q 011184 210 ----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 284 (491)
Q Consensus 210 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (491)
....+|+.|+|||++.+..++.++||||||+++|+|++ |+.||.............. .....++..+++.
T Consensus 167 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~ 241 (287)
T 1u59_A 167 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ-----GKRMECPPECPPE 241 (287)
T ss_dssp ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHT-----TCCCCCCTTCCHH
T ss_pred eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhc-----CCcCCCCCCcCHH
Confidence 12345788999999988889999999999999999999 9988865433322211111 1122345567789
Q ss_pred HHHHHHHhccCCCCCCCChhHHHHHhccccccCCCC
Q 011184 285 LVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVP 320 (491)
Q Consensus 285 ~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~~ 320 (491)
+.+++.+||+.||.+|||+.++++.|+.+..+...+
T Consensus 242 l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 277 (287)
T 1u59_A 242 LYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 277 (287)
T ss_dssp HHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCc
Confidence 999999999999999999999999999998765543
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-43 Score=342.29 Aligned_cols=257 Identities=23% Similarity=0.309 Sum_probs=208.8
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEE--EEEEeCCCC-CCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRI--AVKRFNRMA-WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~v--avK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~l 130 (491)
+..+++++.||+|+||.||++.. .++..+ |||.++... ....+.+.+|++++.++ +||||+++++++...+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 34567788889999999999994 456644 999987532 23456799999999999 89999999999999999999
Q ss_pred EEecCCCCCHHHHhcccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeE
Q 011184 131 VAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPR 196 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~k 196 (491)
||||+++++|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+|
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~k 182 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAK 182 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEE
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCccceEEEcCCCeEE
Confidence 999999999999997432 246899999999999999999999999 99999999999999999999
Q ss_pred EccCCCcccCCC---CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhcccccccccc
Q 011184 197 LSTFGLMKNSRD---GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSC 272 (491)
Q Consensus 197 l~Dfgla~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~ 272 (491)
|+|||+++.... .....+++.|+|||++.+..++.++||||||+++|+|++ |+.||...............
T Consensus 183 L~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~----- 257 (327)
T 1fvr_A 183 IADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG----- 257 (327)
T ss_dssp ECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGT-----
T ss_pred EcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcC-----
Confidence 999999874332 223356788999999988889999999999999999998 99888665443332222111
Q ss_pred ccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccCC
Q 011184 273 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 318 (491)
Q Consensus 273 ~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~ 318 (491)
.....+..++..+.+|+.+||+.||.+|||+.++++.|+.+.....
T Consensus 258 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 258 YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 1123345667899999999999999999999999999998877654
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-44 Score=343.08 Aligned_cols=255 Identities=21% Similarity=0.310 Sum_probs=209.2
Q ss_pred ccccccccCCCCCccEEEEEEE------CCCCEEEEEEeCCCCCC-ChhHHHHHHHHHhcc-CCCCcceEEeEeecCCee
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDER 128 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~ 128 (491)
..+.+++.||+|+||.||+|.. .+++.||||+++..... ..+.+.+|+.+++++ +||||+++++++..++..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 102 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCc
Confidence 3577788889999999999984 24678999999754421 246789999999999 999999999999999999
Q ss_pred EEEEecCCCCCHHHHhcccCC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCC
Q 011184 129 LLVAEYMPNETLAKHLFHWET----------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 192 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~ 192 (491)
++||||+++|+|.+++..... ..+++..++.++.||+.||.|||+++ ++||||||+||+++.+
T Consensus 103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~ 181 (313)
T 1t46_A 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHG 181 (313)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEETT
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCccceEEEcCC
Confidence 999999999999999975322 24899999999999999999999999 9999999999999999
Q ss_pred CCeEEccCCCcccCCCCC------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccc
Q 011184 193 GNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNL 265 (491)
Q Consensus 193 ~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~ 265 (491)
+.+||+|||++....... ...+|+.|+|||.+.+..++.++||||||+++|+|++ |..|+.............
T Consensus 182 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~ 261 (313)
T 1t46_A 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 261 (313)
T ss_dssp TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHH
T ss_pred CCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHh
Confidence 999999999987654432 2345678999999998899999999999999999999 888876543221111111
Q ss_pred cccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 266 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
. .......+...+..+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 262 ~----~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 262 K----EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp H----HTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred c----cCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 1 1111223445668999999999999999999999999999887654
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-43 Score=344.62 Aligned_cols=255 Identities=22% Similarity=0.299 Sum_probs=209.7
Q ss_pred ccccccccCCCCCccEEEEEEEC--------CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhcc-CCCCcceEEeEeecCC
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE--------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGD 126 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~ 126 (491)
..+.+++.||+|+||.||+|... ++..||||+++..... ....+.+|+.+++++ +||||+++++++...+
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 114 (334)
T 2pvf_A 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 114 (334)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCC
Confidence 46778888999999999999853 4678999999754321 245688999999999 8999999999999999
Q ss_pred eeEEEEecCCCCCHHHHhcccCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCC
Q 011184 127 ERLLVAEYMPNETLAKHLFHWET--------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 192 (491)
Q Consensus 127 ~~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~ 192 (491)
..++||||+++++|.+++..... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.+
T Consensus 115 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~ 193 (334)
T 2pvf_A 115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTEN 193 (334)
T ss_dssp CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTT
T ss_pred ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCccceEEEcCC
Confidence 99999999999999999975321 24889999999999999999999999 9999999999999999
Q ss_pred CCeEEccCCCcccCCCC------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccc
Q 011184 193 GNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNL 265 (491)
Q Consensus 193 ~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~ 265 (491)
+.+||+|||++...... ....+|+.|+|||++.+..++.++||||||+++|+|++ |..|+.......+.....
T Consensus 194 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~ 273 (334)
T 2pvf_A 194 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273 (334)
T ss_dssp CCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred CCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHh
Confidence 99999999998765432 22345778999999988889999999999999999999 888886654333222111
Q ss_pred cccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccC
Q 011184 266 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
.. .....+..++..+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 274 ~~-----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~ 320 (334)
T 2pvf_A 274 EG-----HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 320 (334)
T ss_dssp HT-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cC-----CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 11 112234556789999999999999999999999999999887643
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-44 Score=345.53 Aligned_cols=252 Identities=17% Similarity=0.223 Sum_probs=197.7
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCC---hhHHHHHHHHHhccCCCCcceEEeEeecCCe----e
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDE----R 128 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~----~ 128 (491)
..|++++.||+|+||.||++.. .+++.||||+++...... ...+.+|+.++.+++||||+++++++..... .
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 3577888899999999999995 568999999997654433 2468899999999999999999999876543 4
Q ss_pred EEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC
Q 011184 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 208 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 208 (491)
++||||++|++|.+++.. ..++++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 92 ~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 168 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIAD 168 (311)
T ss_dssp EEEEECCCEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred EEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence 999999999999999964 357999999999999999999999999 99999999999999999999999999875432
Q ss_pred C-------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchh
Q 011184 209 G-------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 281 (491)
Q Consensus 209 ~-------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (491)
. ....||+.|+|||++.+..++.++||||||+++|+|++|+.||.................. ........+
T Consensus 169 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 246 (311)
T 3ork_A 169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI--PPSARHEGL 246 (311)
T ss_dssp -------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCC--CHHHHSTTC
T ss_pred cccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCC--CcccccCCC
Confidence 2 2345799999999999989999999999999999999999998765433222111111100 000112345
Q ss_pred HHHHHHHHHHhccCCCCCCCChhHHH-HHhccc
Q 011184 282 GTELVRLASRCLQYEPRERPNPKSLV-TALSPL 313 (491)
Q Consensus 282 ~~~~~~li~~cl~~dp~~Rps~~~il-~~L~~~ 313 (491)
+.++.+|+.+||+.||.+||+..+++ ..|...
T Consensus 247 ~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 67899999999999999999766555 444444
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=336.34 Aligned_cols=245 Identities=21% Similarity=0.291 Sum_probs=204.5
Q ss_pred CccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
+..+++++.||+|+||+||++... ++..||||++.... ......+.+|+.++++++||||+++++++...+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 456788899999999999999954 57899999985421 12345788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC--
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 209 (491)
|||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.++|+|||++......
T Consensus 88 ~e~~~~~~l~~~l~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~-i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~ 164 (279)
T 3fdn_A 88 LEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 164 (279)
T ss_dssp ECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-CEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred EecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecccCChHhEEEcCCCCEEEEeccccccCCcccc
Confidence 999999999999864 356899999999999999999999999 999999999999999999999999988654332
Q ss_pred CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHH
Q 011184 210 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 289 (491)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 289 (491)
....+|+.|+|||.+.+..++.++||||||+++|+|++|..||.............. ....++...+..+.+|+
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~li 238 (279)
T 3fdn_A 165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------VEFTFPDFVTEGARDLI 238 (279)
T ss_dssp ---CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH------TCCCCCTTSCHHHHHHH
T ss_pred cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHh------CCCCCCCcCCHHHHHHH
Confidence 345689999999999988899999999999999999999999876544332221111 11233455668899999
Q ss_pred HHhccCCCCCCCChhHHHHH
Q 011184 290 SRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~ 309 (491)
.+||+.||.+|||+.++++.
T Consensus 239 ~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 239 SRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp HHHCCSSGGGSCCHHHHHHC
T ss_pred HHHhccChhhCCCHHHHhhC
Confidence 99999999999999999983
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-44 Score=366.71 Aligned_cols=250 Identities=18% Similarity=0.249 Sum_probs=207.8
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCC---CCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
...+++++.||+|+||.||++.. .+|+.||||++... .......+.+|+.+|+.++||||+++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 34577788889999999999996 46999999999542 223456788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC--
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 209 (491)
|||++||+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g-IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~ 341 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeccCCchheEEEeCCCCeEEEecccceecccCcc
Confidence 99999999999997644456999999999999999999999999 999999999999999999999999999876543
Q ss_pred -CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHH
Q 011184 210 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 288 (491)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (491)
....||+.|+|||++.+..++.++|||||||++|||++|..||...............+. .....++..+++++.+|
T Consensus 342 ~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~--~~~~~~p~~~s~~~~dL 419 (576)
T 2acx_A 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK--EVPEEYSERFSPQARSL 419 (576)
T ss_dssp EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHH--HCCCCCCTTSCHHHHHH
T ss_pred ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhh--cccccCCccCCHHHHHH
Confidence 245789999999999988899999999999999999999999865421100000001111 01223456677899999
Q ss_pred HHHhccCCCCCCC-----ChhHHHH
Q 011184 289 ASRCLQYEPRERP-----NPKSLVT 308 (491)
Q Consensus 289 i~~cl~~dp~~Rp-----s~~~il~ 308 (491)
|.+||+.||.+|| +++++++
T Consensus 420 I~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 420 CSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp HHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred HHHhccCCHHHcCCCCCCCHHHHHh
Confidence 9999999999999 6788876
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-43 Score=345.64 Aligned_cols=245 Identities=20% Similarity=0.286 Sum_probs=198.8
Q ss_pred ccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCC--CCcceEEeEeecCCeeEEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRN--NRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H--~niv~~~~~~~~~~~~~lv~ 132 (491)
..|++++.||+|+||+||++...+++.||||++....... .+.+.+|+.++..++| |||+++++++..++..++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 3578889999999999999998889999999997544322 3578899999999976 99999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC---
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 209 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 209 (491)
|+ .+++|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++ ++.+||+|||++......
T Consensus 89 e~-~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 163 (343)
T 3dbq_A 89 EC-GNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 163 (343)
T ss_dssp CC-CSEEHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred eC-CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEEE-CCcEEEeecccccccCccccc
Confidence 95 57999999974 467899999999999999999999999 99999999999997 578999999999865432
Q ss_pred ---CccccCCCCCCcccccC-----------CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccC
Q 011184 210 ---KSYSTNLAFTPPEYLRT-----------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 275 (491)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~-----------~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (491)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||........ ......+.....
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~~~~~~~~~~ 240 (343)
T 3dbq_A 164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---KLHAIIDPNHEI 240 (343)
T ss_dssp ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH---HHHHHHCTTSCC
T ss_pred ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHH---HHHHHhcCCccc
Confidence 24468999999999865 5688899999999999999999998865322111 111122222233
Q ss_pred CCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 276 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 276 ~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
.++...+..+.+|+.+||+.||.+|||+.++++.
T Consensus 241 ~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 241 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 4455556789999999999999999999999974
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-44 Score=355.84 Aligned_cols=252 Identities=19% Similarity=0.165 Sum_probs=203.8
Q ss_pred cCCccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeE
Q 011184 54 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 129 (491)
Q Consensus 54 ~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~ 129 (491)
-....+++++.||+|+||.||++.. .+|+.||||+++... ......+.+|+.++..++||||+++++++.+.+..+
T Consensus 58 ~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~ 137 (412)
T 2vd5_A 58 LQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLY 137 (412)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEE
T ss_pred CChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE
Confidence 3445677888889999999999996 469999999996421 112345889999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 209 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 209 (491)
+||||++||+|.+++... ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.....
T Consensus 138 lVmE~~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILld~~g~vkL~DFGla~~~~~~ 215 (412)
T 2vd5_A 138 LVMEYYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRLG-YVHRDIKPDNILLDRCGHIRLADFGSCLKLRAD 215 (412)
T ss_dssp EEECCCCSCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEEcCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccCHHHeeecCCCCEEEeechhheeccCC
Confidence 999999999999999642 347999999999999999999999999 999999999999999999999999999765433
Q ss_pred -----CccccCCCCCCccccc-------CCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCC
Q 011184 210 -----KSYSTNLAFTPPEYLR-------TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 277 (491)
Q Consensus 210 -----~~~~~t~~y~aPE~~~-------~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (491)
....||+.|+|||++. ...++.++|||||||++|||++|+.||.................. ......
T Consensus 216 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~-~~~p~~ 294 (412)
T 2vd5_A 216 GTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEH-LSLPLV 294 (412)
T ss_dssp SCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH-CCCC--
T ss_pred CccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC-cCCCcc
Confidence 2347899999999987 356899999999999999999999998765443332222211000 001112
Q ss_pred CchhHHHHHHHHHHhccCCCCCC---CChhHHHHH
Q 011184 278 TDDDGTELVRLASRCLQYEPRER---PNPKSLVTA 309 (491)
Q Consensus 278 ~~~~~~~~~~li~~cl~~dp~~R---ps~~~il~~ 309 (491)
+..++.++.+||.+||. +|.+| |+++++++.
T Consensus 295 ~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 295 DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp --CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 34567899999999999 99998 589999863
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-44 Score=350.78 Aligned_cols=257 Identities=15% Similarity=0.170 Sum_probs=202.1
Q ss_pred ccccccccCCCCCccEEEEEEECC------CCEEEEEEeCCCCCC-----------ChhHHHHHHHHHhccCCCCcceEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLEN------QRRIAVKRFNRMAWP-----------DPRQFLEEARSVGQLRNNRLTNLL 119 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~niv~~~ 119 (491)
..+++++.||+|+||+||+|.+.. ++.||||++...... ....+..|+..+..++||||++++
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~ 114 (364)
T 3op5_A 35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYW 114 (364)
T ss_dssp CEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEE
T ss_pred CeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEE
Confidence 367888899999999999999654 478999998654311 011234455666777899999999
Q ss_pred eEeecC----CeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeC--CCC
Q 011184 120 GCCCEG----DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD--EDG 193 (491)
Q Consensus 120 ~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~--~~~ 193 (491)
+++... ...+|||||+ |++|.+++.. ....+++..++.|+.||+.||.|||+++ |+||||||+|||++ .++
T Consensus 115 ~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~-iiHrDlkp~Nill~~~~~~ 191 (364)
T 3op5_A 115 GSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA-NAKRFSRKTVLQLSLRILDILEYIHEHE-YVHGDIKASNLLLNYKNPD 191 (364)
T ss_dssp EEEEEEETTEEEEEEEEECE-EEEHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEESSCTT
T ss_pred eeeeeccCCcceEEEEEeCC-CCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eEEecCCHHHEEEecCCCC
Confidence 998764 4589999999 9999999975 3467999999999999999999999998 99999999999998 889
Q ss_pred CeEEccCCCcccCCCC-----------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHh--
Q 011184 194 NPRLSTFGLMKNSRDG-----------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI-- 260 (491)
Q Consensus 194 ~~kl~Dfgla~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~-- 260 (491)
.+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~ 271 (364)
T 3op5_A 192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYV 271 (364)
T ss_dssp CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHH
T ss_pred eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHH
Confidence 9999999999754321 233489999999999998899999999999999999999999864321110
Q ss_pred ---h---hccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccCCC
Q 011184 261 ---R---DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 319 (491)
Q Consensus 261 ---~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~ 319 (491)
. ......+.+.++. ...++.++.+++..||+.||.+||++.+|++.|+.+......
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~ 333 (364)
T 3op5_A 272 RDSKIRYRENIASLMDKCFP---AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGS 333 (364)
T ss_dssp HHHHHHHHHCHHHHHHHHSC---TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhhhhHHHHHHHhcc---cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 0 0111122222221 134467899999999999999999999999999988776543
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-43 Score=339.23 Aligned_cols=262 Identities=18% Similarity=0.228 Sum_probs=203.0
Q ss_pred CCccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCC---hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEE
Q 011184 55 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
.+..+++++.||+|+||.||+|.. .+|+.||||++....... ...+.+|+.+++.++||||+++++++...+..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 345678888999999999999995 568999999997543333 3568899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC
Q 011184 131 VAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 208 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 208 (491)
||||+++++|.+++... ....+++..++.++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++.....
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 99999999999988642 2456899999999999999999999999 99999999999999999999999999876443
Q ss_pred C----CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHH
Q 011184 209 G----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 284 (491)
Q Consensus 209 ~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (491)
. ....+++.|+|||.+.+..++.++||||||+++|+|++|..||.......... ...+.............+.+
T Consensus 189 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 266 (310)
T 2wqm_A 189 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL--CKKIEQCDYPPLPSDHYSEE 266 (310)
T ss_dssp ----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHH--HHHHHTTCSCCCCTTTSCHH
T ss_pred CCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHH--HHHhhcccCCCCcccccCHH
Confidence 2 23467899999999998889999999999999999999999886542211000 00000111111122456678
Q ss_pred HHHHHHHhccCCCCCCCChhHHHHHhccccccCCC
Q 011184 285 LVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 319 (491)
Q Consensus 285 ~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~ 319 (491)
+.+++.+||+.||.+|||+.++++.|+.+......
T Consensus 267 l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 267 LRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999876543
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-43 Score=332.08 Aligned_cols=245 Identities=18% Similarity=0.190 Sum_probs=203.6
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
.|.+.+.||+|+||+||+|... ++..||+|++........+.+.+|++++++++||||+++++++..++..++||||++
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (277)
T 3f3z_A 10 YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCT 89 (277)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred hEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccC
Confidence 4677788899999999999954 478999999977665677889999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceee---CCCCCeEEccCCCcccCCCC---C
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDG---K 210 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~---~ 210 (491)
+++|.+++.. ...+++..+..++.|++.||.|||+++ ++||||||+||++ +.++.+||+|||++...... .
T Consensus 90 ~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~ 166 (277)
T 3f3z_A 90 GGELFERVVH--KRVFRESDAARIMKDVLSAVAYCHKLN-VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR 166 (277)
T ss_dssp SCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBC
T ss_pred CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchh
Confidence 9999998864 456899999999999999999999999 9999999999999 78899999999998765433 3
Q ss_pred ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 211 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
...+|+.|+|||++.+ .++.++||||||+++|+|++|..||................... .......+++.+.+++.
T Consensus 167 ~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~ 243 (277)
T 3f3z_A 167 TKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTF--PEKDWLNVSPQAESLIR 243 (277)
T ss_dssp CCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC--CHHHHTTSCHHHHHHHH
T ss_pred ccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCC--CchhhhcCCHHHHHHHH
Confidence 4568999999999875 48999999999999999999999887654332222111111000 00001135678999999
Q ss_pred HhccCCCCCCCChhHHHH
Q 011184 291 RCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~ 308 (491)
+||+.||.+|||+.++++
T Consensus 244 ~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 244 RLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HHTCSSTTTSCCHHHHTT
T ss_pred HHccCChhhCcCHHHHhc
Confidence 999999999999999986
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-43 Score=342.36 Aligned_cols=250 Identities=19% Similarity=0.189 Sum_probs=206.4
Q ss_pred CHHHHHHHhcCC-ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--------ChhHHHHHHHHHhccCCCC
Q 011184 45 TLEQLKNATSGF-AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--------DPRQFLEEARSVGQLRNNR 114 (491)
Q Consensus 45 ~~~~~~~~~~~~-~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~H~n 114 (491)
.++.+....+.| ..|++++.||+|+||+||+|.. .+++.||||++...... ....+.+|+.++++++|||
T Consensus 11 ~~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 90 (335)
T 3dls_A 11 ELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHAN 90 (335)
T ss_dssp ECCHHHHHTTHHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTT
T ss_pred cccccccCCcccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCC
Confidence 333444444433 3578888999999999999994 56899999999764321 2346788999999999999
Q ss_pred cceEEeEeecCCeeEEEEecCCCC-CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC
Q 011184 115 LTNLLGCCCEGDERLLVAEYMPNE-TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 193 (491)
Q Consensus 115 iv~~~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~ 193 (491)
|+++++++...+..++||||+.+| +|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++
T Consensus 91 Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~ 167 (335)
T 3dls_A 91 IIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDR--HPRLDEPLASYIFRQLVSAVGYLRLKD-IIHRDIKDENIVIAEDF 167 (335)
T ss_dssp BCCEEEEEECSSEEEEEEECCTTSCBHHHHHHT--CCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTS
T ss_pred EeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEEeccCHHHEEEcCCC
Confidence 999999999999999999999766 99999963 457999999999999999999999999 99999999999999999
Q ss_pred CeEEccCCCcccCCCC---CccccCCCCCCcccccCCCC-CCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccc
Q 011184 194 NPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 269 (491)
Q Consensus 194 ~~kl~Dfgla~~~~~~---~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~ 269 (491)
.+||+|||++...... ....||+.|+|||++.+..+ +.++||||||+++|+|++|..||...... ...
T Consensus 168 ~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~-- 239 (335)
T 3dls_A 168 TIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------VEA-- 239 (335)
T ss_dssp CEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------TTT--
T ss_pred cEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------Hhh--
Confidence 9999999999865443 24468999999999988776 78999999999999999999988642110 000
Q ss_pred cccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 270 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
....+..++.++.+|+.+||+.||.+|||+.++++.
T Consensus 240 ----~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 240 ----AIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ----CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ----ccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111233456789999999999999999999999984
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-43 Score=334.03 Aligned_cols=247 Identities=17% Similarity=0.207 Sum_probs=187.2
Q ss_pred cCCccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeE
Q 011184 54 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 129 (491)
Q Consensus 54 ~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~ 129 (491)
..+..+++++.||+|+||.||+|.. .+|+.||||++.... ......+.+|+.++++++||||+++++++...+..+
T Consensus 8 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 87 (278)
T 3cok_A 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVY 87 (278)
T ss_dssp SSGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEE
T ss_pred cccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEE
Confidence 3456788889999999999999995 578999999985421 223467899999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 209 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 209 (491)
+||||+++++|.+++.. ...++++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 88 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 88 LVLEMCHNGEMNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSHG-ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EEEECCTTEEHHHHHHT-CSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEEecCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 99999999999999974 3367899999999999999999999999 999999999999999999999999998765422
Q ss_pred ----CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHH
Q 011184 210 ----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 285 (491)
Q Consensus 210 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (491)
....+|+.|+|||.+.+..++.++||||||+++|+|++|+.|+............ ... ....+...+.++
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~ 239 (278)
T 3cok_A 166 HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV----VLA--DYEMPSFLSIEA 239 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----C----CSS--CCCCCTTSCHHH
T ss_pred CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHH----hhc--ccCCccccCHHH
Confidence 2346889999999999888999999999999999999999988654322111111 100 112344567899
Q ss_pred HHHHHHhccCCCCCCCChhHHHH
Q 011184 286 VRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.+++.+||+.||.+|||+.++++
T Consensus 240 ~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 240 KDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHcccCHhhCCCHHHHhc
Confidence 99999999999999999999987
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-43 Score=336.49 Aligned_cols=252 Identities=21% Similarity=0.264 Sum_probs=203.2
Q ss_pred cccccCCCCCccEEEEEEE-CCCC---EEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCee-EEEEe
Q 011184 60 NIVSEHGEKAPNVVYKGKL-ENQR---RIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER-LLVAE 133 (491)
Q Consensus 60 ~~i~~lG~G~~g~Vy~~~~-~~~~---~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~-~lv~e 133 (491)
.+.+.||+|+||+||+|.. .++. .||+|++...... ..+.+.+|+.+++.++||||+++++++...+.. ++|||
T Consensus 24 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e 103 (298)
T 3pls_A 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLP 103 (298)
T ss_dssp EEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEC
T ss_pred ccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEe
Confidence 3447789999999999984 3333 7999999754321 245788999999999999999999999876655 99999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC-----
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----- 208 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----- 208 (491)
|+.+++|.+++.. ....+++..++.++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++.....
T Consensus 104 ~~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 181 (298)
T 3pls_A 104 YMCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQK-FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYS 181 (298)
T ss_dssp CCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGC
T ss_pred cccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccc
Confidence 9999999999965 3467899999999999999999999999 99999999999999999999999999875432
Q ss_pred ---CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCch-hhHhhhccccccccccccCCCCchhHHH
Q 011184 209 ---GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA-LDLIRDRNLQMLTDSCLEGQFTDDDGTE 284 (491)
Q Consensus 209 ---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (491)
.....+++.|+|||.+.+..++.++||||||+++|+|++|..|+.... ......... .......+...+..
T Consensus 182 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 256 (298)
T 3pls_A 182 VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLA-----QGRRLPQPEYCPDS 256 (298)
T ss_dssp SCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHH-----TTCCCCCCTTCCHH
T ss_pred cccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhh-----cCCCCCCCccchHH
Confidence 223456789999999998899999999999999999999766654322 111111111 11112234456678
Q ss_pred HHHHHHHhccCCCCCCCChhHHHHHhccccccCC
Q 011184 285 LVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 318 (491)
Q Consensus 285 ~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~ 318 (491)
+.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus 257 l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~ 290 (298)
T 3pls_A 257 LYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290 (298)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999877643
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-43 Score=336.57 Aligned_cols=246 Identities=16% Similarity=0.192 Sum_probs=203.5
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
.+.+++.||+|+||.||++... +|+.||||+++.........+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (304)
T 2jam_A 10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVS 89 (304)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred cceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCC
Confidence 4677888899999999999954 689999999986554455678999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceee---CCCCCeEEccCCCcccCCCC--Cc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDG--KS 211 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~--~~ 211 (491)
+++|.+++.. ...+++..+..++.|++.||.|||+++ ++||||||+||++ +.++.+||+|||++...... ..
T Consensus 90 ~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 166 (304)
T 2jam_A 90 GGELFDRILE--RGVYTEKDASLVIQQVLSAVKYLHENG-IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMST 166 (304)
T ss_dssp SCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTHH
T ss_pred CccHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCcccc
Confidence 9999998864 356899999999999999999999999 9999999999999 78899999999998765432 23
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
..+|+.|+|||++.+..++.++||||||+++|+|++|..||................. ......+..++..+.+++.+
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~li~~ 244 (304)
T 2jam_A 167 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYY--EFESPFWDDISESAKDFICH 244 (304)
T ss_dssp HHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCC--CCCTTTTTTSCHHHHHHHHH
T ss_pred ccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC--CCCccccccCCHHHHHHHHH
Confidence 4589999999999988899999999999999999999998876543332221111111 11122334567899999999
Q ss_pred hccCCCCCCCChhHHHH
Q 011184 292 CLQYEPRERPNPKSLVT 308 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~ 308 (491)
||+.||.+|||+.++++
T Consensus 245 ~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 245 LLEKDPNERYTCEKALS 261 (304)
T ss_dssp HHCSSTTTSCCHHHHHT
T ss_pred HcCCChhHCcCHHHHhc
Confidence 99999999999999987
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-43 Score=334.09 Aligned_cols=247 Identities=19% Similarity=0.222 Sum_probs=204.7
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
..|++++.||+|+||+||+|.. .+++.||+|++...... ..+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 85 (284)
T 3kk8_A 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 85 (284)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 4577888899999999999995 45899999999654322 23568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCC---eEEccCCCcccCCCCC
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN---PRLSTFGLMKNSRDGK 210 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~---~kl~Dfgla~~~~~~~ 210 (491)
|+++++|.+.+.. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++. +||+|||++.......
T Consensus 86 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~ 162 (284)
T 3kk8_A 86 LVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 162 (284)
T ss_dssp CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC
T ss_pred cCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc
Confidence 9999999998864 356899999999999999999999999 999999999999976655 9999999987655432
Q ss_pred ---ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHH
Q 011184 211 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 287 (491)
Q Consensus 211 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (491)
...+|+.|+|||++.+..++.++||||||+++|+|++|+.||.................. ........+++++.+
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 240 (284)
T 3kk8_A 163 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD--YPSPEWDTVTPEAKS 240 (284)
T ss_dssp BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCTTTTTTSCHHHHH
T ss_pred cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhcccc--CCchhhcccCHHHHH
Confidence 356899999999999989999999999999999999999998765443322221111111 111122355678999
Q ss_pred HHHHhccCCCCCCCChhHHHH
Q 011184 288 LASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~ 308 (491)
|+.+||+.||.+|||+.++++
T Consensus 241 li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 241 LIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp HHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHcccChhhCCCHHHHhc
Confidence 999999999999999999987
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-43 Score=335.80 Aligned_cols=246 Identities=18% Similarity=0.296 Sum_probs=204.7
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeec------------
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE------------ 124 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~------------ 124 (491)
.+++++.||+|+||.||++... +++.||||++.... ..+.+|+++++.++||||+++++++..
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 87 (284)
T 2a19_B 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNS 87 (284)
T ss_dssp HEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--------
T ss_pred ccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccc
Confidence 4667788899999999999965 68999999997532 467899999999999999999998854
Q ss_pred ----CCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccC
Q 011184 125 ----GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 200 (491)
Q Consensus 125 ----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Df 200 (491)
....++||||+++++|.+++.......+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+||
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Df 166 (284)
T 2a19_B 88 SRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK-LINRDLKPSNIFLVDTKQVKIGDF 166 (284)
T ss_dssp -CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCC
T ss_pred cccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCHHHEEEcCCCCEEECcc
Confidence 345799999999999999997544567999999999999999999999999 999999999999999999999999
Q ss_pred CCcccCCCC---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCC
Q 011184 201 GLMKNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 277 (491)
Q Consensus 201 gla~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (491)
|++...... ....+|+.|+|||.+.+..++.++||||||+++|+|++|..|+..... .. ..+. ....
T Consensus 167 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-~~-----~~~~----~~~~ 236 (284)
T 2a19_B 167 GLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK-FF-----TDLR----DGII 236 (284)
T ss_dssp TTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH-HH-----HHHH----TTCC
T ss_pred hhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHH-HH-----HHhh----cccc
Confidence 998765432 344689999999999988899999999999999999999976532211 11 0111 1123
Q ss_pred CchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccCC
Q 011184 278 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 318 (491)
Q Consensus 278 ~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~ 318 (491)
+...+..+.+++.+||+.||.+|||+.++++.|+.+....+
T Consensus 237 ~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 237 SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 34456789999999999999999999999999998876543
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=344.84 Aligned_cols=252 Identities=17% Similarity=0.256 Sum_probs=202.6
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCE----EEEEEeCCCC-CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRR----IAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
..+++++.||+|+||+||+|.. .+++. ||+|.+.... ......+.+|+.++++++||||+++++++..+. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 4577888899999999999995 34544 5778775433 334678999999999999999999999998755 789
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 209 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 209 (491)
|+||+.+|+|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 94 v~~~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~ 171 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp EECCCSSCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTC--------
T ss_pred EEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCC-CcCCCCCHHHEEEcCCCCEEEccCcceeEccCcc
Confidence 9999999999999975 3457999999999999999999999999 999999999999999999999999999765332
Q ss_pred -----CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHH
Q 011184 210 -----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 283 (491)
Q Consensus 210 -----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (491)
....+|+.|+|||++.+..++.++||||||+++|+|++ |..||.......+..... .......+..++.
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 246 (327)
T 3lzb_A 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-----KGERLPQPPICTI 246 (327)
T ss_dssp --------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-----TTCCCCCCTTBCH
T ss_pred ccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH-----cCCCCCCCccCCH
Confidence 12345778999999999999999999999999999999 888886543332221111 1112223455678
Q ss_pred HHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 284 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 284 ~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
++.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 247 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 247 DVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 899999999999999999999999999988754
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-43 Score=334.34 Aligned_cols=241 Identities=17% Similarity=0.194 Sum_probs=201.8
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCC--hhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEEe
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD--PRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e 133 (491)
.+++++.||+|+||+||+|... +++.||||++....... ...+.+|+..+..+ +||||+++++++..++..++|||
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e 91 (289)
T 1x8b_A 12 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNE 91 (289)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEE
Confidence 4677888899999999999964 68999999997643332 45788999999999 99999999999999999999999
Q ss_pred cCCCCCHHHHhcccC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCC-------------------
Q 011184 134 YMPNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED------------------- 192 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~------------------- 192 (491)
|+++++|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.+
T Consensus 92 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~ 170 (289)
T 1x8b_A 92 YCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS-LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNK 170 (289)
T ss_dssp CCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEC--------------------C
T ss_pred ecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC-EeecCCCHHHEEEcCCCCCcccccccccccccCCc
Confidence 999999999996432 256899999999999999999999999 9999999999999844
Q ss_pred CCeEEccCCCcccCCCCCccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchh-hHhhhcccccccc
Q 011184 193 GNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNLQMLTD 270 (491)
Q Consensus 193 ~~~kl~Dfgla~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~-~~~~~~~~~~~~~ 270 (491)
+.+||+|||++..........+|+.|+|||++.+. .++.++||||||+++|+|++|.+++..... ..+...
T Consensus 171 ~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~------- 243 (289)
T 1x8b_A 171 VMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIRQG------- 243 (289)
T ss_dssp CCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHHHHTT-------
T ss_pred eEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHHHHcC-------
Confidence 47999999999887776677799999999999865 466899999999999999999876543321 111111
Q ss_pred ccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 271 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 271 ~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.....+..++..+.+++.+||+.||.+|||+.++++
T Consensus 244 --~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 244 --RLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp --CCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --CCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 112334556789999999999999999999999987
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-44 Score=348.50 Aligned_cols=255 Identities=18% Similarity=0.162 Sum_probs=197.1
Q ss_pred ccccccccCCCCCccEEEEEEEC----CCCEEEEEEeCCCCCC-----------ChhHHHHHHHHHhccCCCCcceEEeE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE----NQRRIAVKRFNRMAWP-----------DPRQFLEEARSVGQLRNNRLTNLLGC 121 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~niv~~~~~ 121 (491)
..+.+++.||+|+||.||+|... ++..||||++...... ....+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 45788889999999999999964 5788999998754321 12346788889999999999999999
Q ss_pred eec----CCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC--Ce
Q 011184 122 CCE----GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG--NP 195 (491)
Q Consensus 122 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~--~~ 195 (491)
+.. ....++||||+ +++|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++ .+
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~ 192 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQ--NGTFKKSTVLQLGIRMLDVLEYIHENE-YVHGDIKAANLLLGYKNPDQV 192 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBG--GGBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEESSSTTSE
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCcCHHHEEEccCCCCcE
Confidence 987 67899999999 9999999974 237999999999999999999999999 99999999999998777 99
Q ss_pred EEccCCCcccCCCC-----------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhH-----
Q 011184 196 RLSTFGLMKNSRDG-----------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL----- 259 (491)
Q Consensus 196 kl~Dfgla~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~----- 259 (491)
||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 193 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~ 272 (345)
T 2v62_A 193 YLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQT 272 (345)
T ss_dssp EECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHH
T ss_pred EEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHH
Confidence 99999999754321 23468999999999998889999999999999999999999885421111
Q ss_pred hhhccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 260 IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
........+............++.++.+++.+||+.||.+|||+++|++.|+.+..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 273 AKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 01111111111000000011456789999999999999999999999999988754
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-43 Score=367.30 Aligned_cols=246 Identities=20% Similarity=0.259 Sum_probs=203.7
Q ss_pred cCCCCCccEEEEEEEC---CCCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCC
Q 011184 64 EHGEKAPNVVYKGKLE---NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 139 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gs 139 (491)
.||+|+||.||+|.+. ++..||||+++.... ...+.+.+|+++|++++||||++++++|.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 6899999999999853 456799999976533 346789999999999999999999999976 56899999999999
Q ss_pred HHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-------cc
Q 011184 140 LAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-------SY 212 (491)
Q Consensus 140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-------~~ 212 (491)
|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ..
T Consensus 422 L~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~-iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~ 499 (613)
T 2ozo_A 422 LHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 499 (613)
T ss_dssp HHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCSTTTTCC------------
T ss_pred HHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCC
Confidence 9999964 3457999999999999999999999999 9999999999999999999999999998654321 12
Q ss_pred ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
.+++.|+|||++.+..++.++|||||||++|||++ |+.||.......+...... ......+..++.++.+||.+
T Consensus 500 ~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~-----~~~~~~p~~~~~~l~~li~~ 574 (613)
T 2ozo_A 500 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ-----GKRMECPPECPPELYALMSD 574 (613)
T ss_dssp --CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHT-----TCCCCCCTTCCHHHHHHHHH
T ss_pred CCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCcCCHHHHHHHHH
Confidence 34578999999998999999999999999999998 9988876443322221111 11223455677899999999
Q ss_pred hccCCCCCCCChhHHHHHhccccccC
Q 011184 292 CLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
||+.||.+||++.+|++.|+.+....
T Consensus 575 cl~~dP~~RPs~~~l~~~L~~~~~~~ 600 (613)
T 2ozo_A 575 CWIYKWEDRPDFLTVEQRMRACYYSL 600 (613)
T ss_dssp TTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred HcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 99999999999999999999876543
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-43 Score=354.47 Aligned_cols=254 Identities=18% Similarity=0.224 Sum_probs=185.6
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecC-----Cee
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEG-----DER 128 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~-----~~~ 128 (491)
..|++++.||+|+||+||+|.. .+++.||||++...... ..+.+.+|+.+|+.++||||+++++++... +..
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 3578899999999999999994 46899999999654322 245788999999999999999999998443 568
Q ss_pred EEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC
Q 011184 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 208 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 208 (491)
|+||||+. ++|.+++. ....+++..+..++.||+.||.|||+++ ||||||||+||||+.++.+||+|||+++....
T Consensus 133 ~lv~e~~~-~~L~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 208 (458)
T 3rp9_A 133 YVVLEIAD-SDFKKLFR--TPVYLTELHIKTLLYNLLVGVKYVHSAG-ILHRDLKPANCLVNQDCSVKVCDFGLARTVDY 208 (458)
T ss_dssp EEEECCCS-EEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred EEEEeccc-cchhhhcc--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cCCCCCChhhEEECCCCCEeecccccchhccC
Confidence 99999985 89999886 3467999999999999999999999999 99999999999999999999999999986431
Q ss_pred -------------------------------CCccccCCCCCCcccc-cCCCCCCCccchhHHHHHHHHHh---------
Q 011184 209 -------------------------------GKSYSTNLAFTPPEYL-RTGRVTPESVIYSFGTLLLDLLS--------- 247 (491)
Q Consensus 209 -------------------------------~~~~~~t~~y~aPE~~-~~~~~~~~~Dv~slG~vl~ellt--------- 247 (491)
.....||+.|+|||++ .+..++.++|||||||++|||++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~ 288 (458)
T 3rp9_A 209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYH 288 (458)
T ss_dssp CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSG
T ss_pred ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccccc
Confidence 1234578999999986 45669999999999999999999
Q ss_pred --CCCCCCCchhhHh--------------------hhccc-----------------------ccccc--ccccCCCCch
Q 011184 248 --GKHIPPSHALDLI--------------------RDRNL-----------------------QMLTD--SCLEGQFTDD 280 (491)
Q Consensus 248 --g~~~~~~~~~~~~--------------------~~~~~-----------------------~~~~~--~~~~~~~~~~ 280 (491)
|+++|++...... ..... ..+.. ..........
T Consensus 289 ~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (458)
T 3rp9_A 289 ADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPA 368 (458)
T ss_dssp GGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTT
T ss_pred ccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCC
Confidence 5555544321000 00000 00000 0000011233
Q ss_pred hHHHHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 281 DGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 281 ~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
.+.++.+||.+||..||.+|||++++++ ..+...
T Consensus 369 ~s~~~~dLl~~mL~~dP~~R~t~~e~L~--Hp~f~~ 402 (458)
T 3rp9_A 369 SSADAIHLLKRMLVFNPNKRITINECLA--HPFFKE 402 (458)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHH--SGGGTT
T ss_pred CCHHHHHHHHHHhccCccccCCHHHHhc--CHhhhh
Confidence 4678999999999999999999999998 444443
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=343.57 Aligned_cols=240 Identities=18% Similarity=0.234 Sum_probs=179.0
Q ss_pred ccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccC-CCCcceEEeEeecCCeeEEEEecCCCCCH
Q 011184 63 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVAEYMPNETL 140 (491)
Q Consensus 63 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~~lv~e~~~~gsL 140 (491)
+.||+|+||+||++.. .+++.||||++... ....+.+|+.+++.+. ||||+++++++.+++..++||||++||+|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 6789999999999996 46899999999643 3567889999999997 99999999999999999999999999999
Q ss_pred HHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC---CeEEccCCCcccCCCC----Cccc
Q 011184 141 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG---NPRLSTFGLMKNSRDG----KSYS 213 (491)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~---~~kl~Dfgla~~~~~~----~~~~ 213 (491)
.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++..... ....
T Consensus 94 ~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 170 (325)
T 3kn6_A 94 FERIKK--KKHFSETEASYIMRKLVSAVSHMHDVG-VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC 170 (325)
T ss_dssp HHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEC----CEEEECCCTTCEECCC---------
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccC
Confidence 999974 467999999999999999999999999 99999999999997665 7999999999765432 3445
Q ss_pred cCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhh---ccccccccccc--cCCCCchhHHHHHHH
Q 011184 214 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD---RNLQMLTDSCL--EGQFTDDDGTELVRL 288 (491)
Q Consensus 214 ~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~l 288 (491)
+|+.|+|||++.+..++.++||||||+++|+|++|..||.......... .....+..... .......+++++.+|
T Consensus 171 ~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 250 (325)
T 3kn6_A 171 FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDL 250 (325)
T ss_dssp -------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHH
T ss_pred CCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHH
Confidence 7899999999998899999999999999999999999886532210000 00011111100 001112456889999
Q ss_pred HHHhccCCCCCCCChhHHHH
Q 011184 289 ASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~ 308 (491)
+.+||+.||.+|||++++++
T Consensus 251 i~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 251 IQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HHHHHCCCTTTCCCTTTSTT
T ss_pred HHHHCCCChhHCCCHHHHhc
Confidence 99999999999999999976
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-43 Score=337.33 Aligned_cols=254 Identities=25% Similarity=0.313 Sum_probs=202.5
Q ss_pred ccccccccCCCCCccEEEEEEECC----CCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEee-cCCeeEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLEN----QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCC-EGDERLL 130 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~-~~~~~~l 130 (491)
..+++.+.||+|+||+||+|...+ ...||+|.+...... ..+.+.+|+.++++++||||+++++++. .++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 356777889999999999999532 235899998754321 2457899999999999999999999864 4567899
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 209 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 209 (491)
||||+++++|.+++.. ....+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++......
T Consensus 105 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 182 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 182 (298)
T ss_dssp EEECCTTCBHHHHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGG
T ss_pred EEeCCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEECCCCCEEECcccccccccccc
Confidence 9999999999999964 3456899999999999999999999999 999999999999999999999999998754332
Q ss_pred -------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCC-CCchhhHhhhccccccccccccCCCCchh
Q 011184 210 -------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDD 281 (491)
Q Consensus 210 -------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (491)
....+|+.|+|||.+.+..++.++||||||+++|+|++|..|+ ............... .....+..+
T Consensus 183 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 257 (298)
T 3f66_A 183 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG-----RRLLQPEYC 257 (298)
T ss_dssp GCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTT-----CCCCCCTTC
T ss_pred hhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcC-----CCCCCCccC
Confidence 2334677899999999889999999999999999999965444 332211111111111 111223445
Q ss_pred HHHHHHHHHHhccCCCCCCCChhHHHHHhccccccC
Q 011184 282 GTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 282 ~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
+..+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 258 ~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 293 (298)
T 3f66_A 258 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293 (298)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 678999999999999999999999999999887654
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-43 Score=334.31 Aligned_cols=246 Identities=19% Similarity=0.247 Sum_probs=207.5
Q ss_pred cCCccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeE
Q 011184 54 SGFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 129 (491)
Q Consensus 54 ~~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~ 129 (491)
-....+++++.||+|+||.||+|... +++.||||++.... ......+.+|+++++.++||||+++++++...+..+
T Consensus 11 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 90 (284)
T 2vgo_A 11 FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIY 90 (284)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEE
Confidence 34567888899999999999999964 57899999985421 223567899999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC-
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD- 208 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~- 208 (491)
+||||+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++.....
T Consensus 91 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (284)
T 2vgo_A 91 LMLEFAPRGELYKELQK--HGRFDEQRSATFMEELADALHYCHERK-VIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167 (284)
T ss_dssp EEECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred EEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence 99999999999999974 356899999999999999999999999 99999999999999999999999999875443
Q ss_pred -CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHH
Q 011184 209 -GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 287 (491)
Q Consensus 209 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (491)
.....+++.|+|||++.+..++.++||||||+++|+|++|..||............... ...++...+..+.+
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 241 (284)
T 2vgo_A 168 RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV------DLKFPPFLSDGSKD 241 (284)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT------CCCCCTTSCHHHHH
T ss_pred ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhcc------ccCCCCcCCHHHHH
Confidence 23456899999999999888999999999999999999999988754433222211111 11344556789999
Q ss_pred HHHHhccCCCCCCCChhHHHH
Q 011184 288 LASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~ 308 (491)
++.+||+.||.+|||+.++++
T Consensus 242 li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 242 LISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp HHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHhhcCHhhCCCHHHHhh
Confidence 999999999999999999987
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-43 Score=360.50 Aligned_cols=250 Identities=17% Similarity=0.226 Sum_probs=205.8
Q ss_pred CccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
...+++++.||+|+||.||+++.. +|+.||||++.... ......+.+|+.++++++||||+++++++...+..++|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 456777888999999999999964 69999999996422 23456788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC
Q 011184 132 AEYMPNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 209 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 209 (491)
|||++||+|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++.....
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g-IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~ 342 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG 342 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC-CcccCCChHHEEEeCCCCEEEeecceeeeccCC
Confidence 99999999999986533 346999999999999999999999999 999999999999999999999999999865433
Q ss_pred ----CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHH
Q 011184 210 ----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 285 (491)
Q Consensus 210 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (491)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...............+... ...++..++..+
T Consensus 343 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~--~~~~p~~~s~~~ 420 (543)
T 3c4z_A 343 QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ--AVTYPDKFSPAS 420 (543)
T ss_dssp CCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC--CCCCCTTSCHHH
T ss_pred CcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhc--ccCCCcccCHHH
Confidence 23478999999999999899999999999999999999999987542110000011111111 123456677899
Q ss_pred HHHHHHhccCCCCCCCCh-----hHHHH
Q 011184 286 VRLASRCLQYEPRERPNP-----KSLVT 308 (491)
Q Consensus 286 ~~li~~cl~~dp~~Rps~-----~~il~ 308 (491)
.+||.+||+.||.+||++ ++|+.
T Consensus 421 ~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 421 KDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp HHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred HHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 999999999999999975 56664
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=349.17 Aligned_cols=254 Identities=24% Similarity=0.294 Sum_probs=195.8
Q ss_pred cccccccCCCCCccEEEEEEEC--CC--CEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeec-CCeeEEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE--NQ--RRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCE-GDERLLV 131 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~-~~~~~lv 131 (491)
.+++.+.||+|+||+||+|... ++ ..||||.++.... ...+.+.+|+.++++++||||+++++++.. ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 3456678899999999999953 22 3689999875432 234679999999999999999999998754 4678999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC--
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 209 (491)
|||+++|+|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 170 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 247 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247 (373)
T ss_dssp EECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred EECCCCCCHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-EecCccchheEEECCCCCEEEeecccccccccccc
Confidence 999999999999964 3456889999999999999999999999 999999999999999999999999998754321
Q ss_pred ------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhC-CCCCCCchhhHhhhccccccccccccCCCCchhH
Q 011184 210 ------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG-KHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 282 (491)
Q Consensus 210 ------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (491)
....+|+.|+|||++.+..++.++||||||+++|||++| .+|+.............. ......+..++
T Consensus 248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~-----~~~~~~p~~~~ 322 (373)
T 3c1x_A 248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-----GRRLLQPEYCP 322 (373)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHT-----TCCCCCCTTCC
T ss_pred ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCC
Confidence 223456789999999999999999999999999999994 555543221111111000 01112244566
Q ss_pred HHHHHHHHHhccCCCCCCCChhHHHHHhccccccCC
Q 011184 283 TELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 318 (491)
Q Consensus 283 ~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~ 318 (491)
..+.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus 323 ~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 323 DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358 (373)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 789999999999999999999999999998876543
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-43 Score=341.68 Aligned_cols=249 Identities=19% Similarity=0.287 Sum_probs=195.7
Q ss_pred ccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCC-hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
..|.+++.||+|+||+||+|... +++.||||++....... ...+.+|+.+++.++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 46788889999999999999964 68999999997543222 23566899999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----C
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 210 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 210 (491)
++ ++|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++...... .
T Consensus 82 ~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~ 158 (324)
T 3mtl_A 82 LD-KDLKQYLDD-CGNIINMHNVKLFLFQLLRGLAYCHRQK-VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYD 158 (324)
T ss_dssp CS-EEHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EEESSCCGGGEEECTTCCEEECSSSEEECC--------
T ss_pred cc-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCcCHHHEEECCCCCEEEccCcccccccCCccccc
Confidence 97 689988865 3456899999999999999999999999 999999999999999999999999998754322 2
Q ss_pred ccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccccccccc---cc------------
Q 011184 211 SYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC---LE------------ 274 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~---~~------------ 274 (491)
...+|+.|+|||++.+ ..++.++||||||+++|+|++|+.||.+.............+..+. ..
T Consensus 159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (324)
T 3mtl_A 159 NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYN 238 (324)
T ss_dssp ----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTC
T ss_pred cccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccc
Confidence 3467899999999876 4589999999999999999999999876543322111111000000 00
Q ss_pred ---------CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 275 ---------GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 275 ---------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
......++.++.+|+.+||+.||.+|||++++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 239 YPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp CCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0011235678999999999999999999999998
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-43 Score=333.09 Aligned_cols=246 Identities=16% Similarity=0.179 Sum_probs=199.4
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC-CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
.+.+.+.||+|+||+||++.. .++..||+|++.... ....+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 102 (285)
T 3is5_A 23 LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETC 102 (285)
T ss_dssp HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred heeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeC
Confidence 467778889999999999995 468999999986543 234678999999999999999999999999999999999999
Q ss_pred CCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceee---CCCCCeEEccCCCcccCCCC-
Q 011184 136 PNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDG- 209 (491)
Q Consensus 136 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~- 209 (491)
++++|.+++... ....+++..++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||++......
T Consensus 103 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (285)
T 3is5_A 103 EGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH-VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181 (285)
T ss_dssp SCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred CCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-EEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence 999999988542 2367999999999999999999999999 9999999999999 45688999999999764432
Q ss_pred --CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHH
Q 011184 210 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 287 (491)
Q Consensus 210 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (491)
....+|+.|+|||++. ..++.++||||||+++|+|++|+.||................... .......++.+.+
T Consensus 182 ~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 257 (285)
T 3is5_A 182 HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNY---AVECRPLTPQAVD 257 (285)
T ss_dssp -----CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC---CC--CCCCHHHHH
T ss_pred cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCccc---ccccCcCCHHHHH
Confidence 3456889999999986 568899999999999999999999987655443332211111110 1111234578999
Q ss_pred HHHHhccCCCCCCCChhHHHH
Q 011184 288 LASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~ 308 (491)
|+.+||+.||.+|||+.++++
T Consensus 258 li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 258 LLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp HHHHHTCSCTTTSCCHHHHHT
T ss_pred HHHHHccCChhhCcCHHHHhc
Confidence 999999999999999999987
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-43 Score=348.33 Aligned_cols=244 Identities=20% Similarity=0.286 Sum_probs=198.1
Q ss_pred cccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccC--CCCcceEEeEeecCCeeEEEEe
Q 011184 58 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLR--NNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~--H~niv~~~~~~~~~~~~~lv~e 133 (491)
.|.+++.||+|+||+||++...+++.||||++...... ....+.+|+.++..++ ||||+++++++..++..++|||
T Consensus 57 ~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E 136 (390)
T 2zmd_A 57 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 136 (390)
T ss_dssp EEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred ceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe
Confidence 47888899999999999999777999999999754322 2457899999999996 5999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 209 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 209 (491)
+.+++|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 137 -~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~-ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~ 211 (390)
T 2zmd_A 137 -CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV 211 (390)
T ss_dssp -CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCCGGGEEES-SSCEEECCCSSSCCC-------
T ss_pred -cCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHEEEE-CCeEEEEecCccccccCCCccc
Confidence 567999999974 357899999999999999999999999 99999999999996 588999999999865432
Q ss_pred --CccccCCCCCCcccccC-----------CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCC
Q 011184 210 --KSYSTNLAFTPPEYLRT-----------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 276 (491)
Q Consensus 210 --~~~~~t~~y~aPE~~~~-----------~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (491)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||....... .....+.+......
T Consensus 212 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~---~~~~~~~~~~~~~~ 288 (390)
T 2zmd_A 212 VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI---SKLHAIIDPNHEIE 288 (390)
T ss_dssp --CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH---HHHHHHHCTTSCCC
T ss_pred cCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH---HHHHHHhCccccCC
Confidence 24568999999999875 358889999999999999999999886532111 01111222222223
Q ss_pred CCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 277 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 277 ~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
++...+.++.+|+.+||+.||.+|||+.++++.
T Consensus 289 ~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 289 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 444456789999999999999999999999874
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-43 Score=341.83 Aligned_cols=253 Identities=17% Similarity=0.251 Sum_probs=199.0
Q ss_pred cccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhcc--CCCCcceEEeEeecC----CeeEEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL--RNNRLTNLLGCCCEG----DERLLV 131 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~H~niv~~~~~~~~~----~~~~lv 131 (491)
.+++++.||+|+||.||+|... ++.||||++... ....+.+|.+++..+ +||||+++++++... ...++|
T Consensus 38 ~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 113 (337)
T 3mdy_A 38 QIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLI 113 (337)
T ss_dssp HCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEE
T ss_pred ceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEE
Confidence 4677888899999999999985 899999998543 244566677777665 899999999999887 689999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CCcccccccccceeeCCCCCeEEccCCCc
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK--------GRALYHDLNAYRILFDEDGNPRLSTFGLM 203 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~--------~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 203 (491)
|||+++|+|.+++.. ..+++..++.++.|++.||.|||++ + |+||||||+|||++.++.+||+|||++
T Consensus 114 ~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dikp~Nill~~~~~~kl~Dfg~a 189 (337)
T 3mdy_A 114 TDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLA 189 (337)
T ss_dssp ECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EeccCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC-EEecccchHHEEECCCCCEEEEeCCCc
Confidence 999999999999953 4699999999999999999999998 8 999999999999999999999999998
Q ss_pred ccCCCC--------CccccCCCCCCcccccCCCCCCC------ccchhHHHHHHHHHhC----------CCCCCCch---
Q 011184 204 KNSRDG--------KSYSTNLAFTPPEYLRTGRVTPE------SVIYSFGTLLLDLLSG----------KHIPPSHA--- 256 (491)
Q Consensus 204 ~~~~~~--------~~~~~t~~y~aPE~~~~~~~~~~------~Dv~slG~vl~elltg----------~~~~~~~~--- 256 (491)
...... ....||+.|+|||++.+...+.. +|||||||++|||++| ..|+....
T Consensus 190 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 269 (337)
T 3mdy_A 190 VKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD 269 (337)
T ss_dssp EECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCC
Confidence 754332 23468999999999987776665 9999999999999999 44443211
Q ss_pred --hhHhhhccccccccccc-cCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccCC
Q 011184 257 --LDLIRDRNLQMLTDSCL-EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 318 (491)
Q Consensus 257 --~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~ 318 (491)
..............+.. .......++..+.+|+.+||+.||.+|||+.++++.|+.+.....
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 270 PSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred CchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 01111100000001100 001123677889999999999999999999999999999876543
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-43 Score=337.84 Aligned_cols=249 Identities=20% Similarity=0.221 Sum_probs=197.9
Q ss_pred ccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
..|++++.||+|+||+||+|... +|+.||||++....... .+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 45778889999999999999964 58999999986554322 3568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 209 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 209 (491)
|+++++|.+++. ....+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 83 ~~~~~~l~~~~~--~~~~~~~~~~~~i~~~l~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (311)
T 4agu_A 83 YCDHTVLHELDR--YQRGVPEHLVKSITWQTLQAVNFCHKHN-CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY 159 (311)
T ss_dssp CCSEEHHHHHHH--TSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred eCCCchHHHHHh--hhcCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCChhhEEEcCCCCEEEeeCCCchhccCccccc
Confidence 999999998876 3467999999999999999999999999 999999999999999999999999999765432
Q ss_pred CccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccc--------------------cc
Q 011184 210 KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--------------------ML 268 (491)
Q Consensus 210 ~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~--------------------~~ 268 (491)
....+|+.|+|||++.+ ..++.++||||||+++|+|++|..||.+............ ..
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (311)
T 4agu_A 160 DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGV 239 (311)
T ss_dssp ------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTC
T ss_pred CCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccC
Confidence 23467899999999976 5689999999999999999999998876532211110000 00
Q ss_pred ccccccCC-----CCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 269 TDSCLEGQ-----FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 269 ~~~~~~~~-----~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
..+..... .....+..+.+|+.+||+.||.+|||++++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 240 KIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp CCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred cCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00000000 01245678999999999999999999999997
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-43 Score=341.64 Aligned_cols=252 Identities=21% Similarity=0.317 Sum_probs=206.6
Q ss_pred cccccccCCCCCccEEEEEEEC------CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
.+++++.||+|+||.||+|... +++.||||++...... ....+.+|+.+++.++||||+++++++..++..++
T Consensus 26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 105 (322)
T 1p4o_A 26 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 105 (322)
T ss_dssp GEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEE
T ss_pred heeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEE
Confidence 4677788899999999999853 3678999999754321 23468899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhcccC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCC
Q 011184 131 VAEYMPNETLAKHLFHWE--------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 202 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 202 (491)
||||+++++|.+++.... ..++++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+
T Consensus 106 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~NIli~~~~~~kl~Dfg~ 184 (322)
T 1p4o_A 106 IMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFGM 184 (322)
T ss_dssp EEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCSGGGEEECTTCCEEECCTTC
T ss_pred EEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-CccCCCccceEEEcCCCeEEECcCcc
Confidence 999999999999986421 145789999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCC------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccC
Q 011184 203 MKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEG 275 (491)
Q Consensus 203 a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (491)
+...... ....+|+.|+|||++.+..++.++||||||+++|+|++ |..|+................ ..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-----~~ 259 (322)
T 1p4o_A 185 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG-----LL 259 (322)
T ss_dssp CCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTC-----CC
T ss_pred ccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCC-----cC
Confidence 8754322 12345788999999998889999999999999999999 777776543332222111111 11
Q ss_pred CCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 276 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 276 ~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
..+..++..+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 260 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 260 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 2344567889999999999999999999999999988755
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=344.29 Aligned_cols=258 Identities=19% Similarity=0.305 Sum_probs=208.1
Q ss_pred ccccccccCCCCCccEEEEEEE-----CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCC--eeE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-----ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD--ERL 129 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~--~~~ 129 (491)
..+++++.||+|+||.||++.+ .+++.||||++........+.+.+|++++++++||||+++++++...+ ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 3477889999999999999984 358899999998755444567999999999999999999999987654 689
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 209 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 209 (491)
+||||+++++|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 121 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~ 198 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQD 198 (326)
T ss_dssp EEECCCTTCBHHHHHHH-STTSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCSS
T ss_pred EEEECCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-EeccCCCcceEEEcCCCcEEEecCcchhhcccc
Confidence 99999999999999975 3356899999999999999999999999 999999999999999999999999999865433
Q ss_pred C-------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhh---c--------cccccccc
Q 011184 210 K-------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD---R--------NLQMLTDS 271 (491)
Q Consensus 210 ~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~---~--------~~~~~~~~ 271 (491)
. ...++..|+|||.+.+..++.++||||||+++|+|++|..|+.......... . ........
T Consensus 199 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (326)
T 2w1i_A 199 KEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 278 (326)
T ss_dssp CSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred ccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhc
Confidence 2 2345677999999998889999999999999999999997764321111100 0 00011111
Q ss_pred cccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 272 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 272 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
......+..++.++.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 279 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 279 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 111233556778999999999999999999999999999887653
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-42 Score=336.50 Aligned_cols=246 Identities=19% Similarity=0.192 Sum_probs=196.3
Q ss_pred ccccc-ccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEEec
Q 011184 58 VENIV-SEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 58 ~~~~i-~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
.|+++ +.||+|+||+||++. ..+++.||||++..........+.+|++++.++ +||||+++++++..++..++||||
T Consensus 13 ~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 92 (316)
T 2ac3_A 13 VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEK 92 (316)
T ss_dssp SCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEc
Confidence 35554 568999999999999 457899999999776555677899999999985 799999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCC---eEEccCCCcccCCCC--
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN---PRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~---~kl~Dfgla~~~~~~-- 209 (491)
++|++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++. +||+|||++......
T Consensus 93 ~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~ 169 (316)
T 2ac3_A 93 MRGGSILSHIHK--RRHFNELEASVVVQDVASALDFLHNKG-IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD 169 (316)
T ss_dssp CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------
T ss_pred CCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCc
Confidence 999999999974 356899999999999999999999999 999999999999987776 999999998754311
Q ss_pred ---------CccccCCCCCCcccccC-----CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHh-----------hhcc
Q 011184 210 ---------KSYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI-----------RDRN 264 (491)
Q Consensus 210 ---------~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~-----------~~~~ 264 (491)
....||+.|+|||++.+ ..++.++||||||+++|+|++|+.||........ ....
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 249 (316)
T 2ac3_A 170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNML 249 (316)
T ss_dssp ------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHH
T ss_pred cccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHH
Confidence 13358999999999875 4588999999999999999999998865321100 0000
Q ss_pred ccccccccccCCCC----chhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 265 LQMLTDSCLEGQFT----DDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 265 ~~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
...+.... ..++ ..++..+.+|+.+||+.||.+|||+.++++
T Consensus 250 ~~~i~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 250 FESIQEGK--YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHCC--CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHhccC--cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 00000000 0111 235678999999999999999999999998
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=347.80 Aligned_cols=256 Identities=15% Similarity=0.134 Sum_probs=204.7
Q ss_pred ccccccccCCCCCccEEEEEEECC---------CCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcce----------
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLEN---------QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTN---------- 117 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~---------- 117 (491)
..|.+++.||+|+||.||+|.... ++.||||++... ..+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 467788889999999999999653 789999998643 46889999999999999987
Q ss_pred -----EEeEeec-CCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC
Q 011184 118 -----LLGCCCE-GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 191 (491)
Q Consensus 118 -----~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~ 191 (491)
+++++.. ++..++||||+ +++|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIl~~~ 194 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE-YVHGNVTAENIFVDP 194 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCGGGEEEET
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEEcC
Confidence 5677765 67899999999 999999997543467999999999999999999999999 999999999999999
Q ss_pred CC--CeEEccCCCcccCCCC-----------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCch--
Q 011184 192 DG--NPRLSTFGLMKNSRDG-----------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA-- 256 (491)
Q Consensus 192 ~~--~~kl~Dfgla~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~-- 256 (491)
++ .+||+|||+++..... ....||+.|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus 195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 274 (352)
T 2jii_A 195 EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN 274 (352)
T ss_dssp TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC
Confidence 88 8999999999754321 23468899999999998899999999999999999999998886542
Q ss_pred hhHhhhcc---ccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccCCC
Q 011184 257 LDLIRDRN---LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 319 (491)
Q Consensus 257 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~~ 319 (491)
...+.... ................++.++.+|+.+||+.||.+|||++++++.|+.+......
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 340 (352)
T 2jii_A 275 TEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRV 340 (352)
T ss_dssp HHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCC
Confidence 11111110 0000000000011124568999999999999999999999999999998876543
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-43 Score=350.93 Aligned_cols=248 Identities=21% Similarity=0.300 Sum_probs=189.7
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccC-CCCcceEEeEeecCC--eeEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLR-NNRLTNLLGCCCEGD--ERLL 130 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~--~~~l 130 (491)
..|++++.||+|+||+||+|.. .+|+.||||++...... ....+.+|+.++..+. ||||+++++++...+ ..++
T Consensus 9 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~l 88 (388)
T 3oz6_A 9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYL 88 (388)
T ss_dssp TTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEE
T ss_pred CceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEE
Confidence 4578888999999999999995 56899999998654322 2456889999999997 999999999997544 6899
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC--
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-- 208 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-- 208 (491)
||||++ ++|..++.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 89 v~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 163 (388)
T 3oz6_A 89 VFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGG-LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163 (388)
T ss_dssp EEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred EecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence 999997 689998853 57899999999999999999999999 99999999999999999999999999975422
Q ss_pred -----------------------CCccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcc
Q 011184 209 -----------------------GKSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN 264 (491)
Q Consensus 209 -----------------------~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~ 264 (491)
.....||+.|+|||++.+ ..++.++|||||||++|||++|+.||++..........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i 243 (388)
T 3oz6_A 164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERI 243 (388)
T ss_dssp CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 123468999999999986 56899999999999999999999998765432211111
Q ss_pred ccccccc-----------------------------cccC------------CCCchhHHHHHHHHHHhccCCCCCCCCh
Q 011184 265 LQMLTDS-----------------------------CLEG------------QFTDDDGTELVRLASRCLQYEPRERPNP 303 (491)
Q Consensus 265 ~~~~~~~-----------------------------~~~~------------~~~~~~~~~~~~li~~cl~~dp~~Rps~ 303 (491)
...+..+ .... ......++++.+|+.+||+.||.+|||+
T Consensus 244 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~ 323 (388)
T 3oz6_A 244 IGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISA 323 (388)
T ss_dssp HHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred HHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCH
Confidence 1100000 0000 0011345789999999999999999999
Q ss_pred hHHHHH
Q 011184 304 KSLVTA 309 (491)
Q Consensus 304 ~~il~~ 309 (491)
+++++.
T Consensus 324 ~e~l~H 329 (388)
T 3oz6_A 324 NDALKH 329 (388)
T ss_dssp HHHTTS
T ss_pred HHHhCC
Confidence 999984
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-43 Score=335.59 Aligned_cols=250 Identities=21% Similarity=0.271 Sum_probs=204.7
Q ss_pred cccccc-cCCCCCccEEEEEEE---CCCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 58 VENIVS-EHGEKAPNVVYKGKL---ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 58 ~~~~i~-~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
.+.+.+ .||+|+||+||+|.. .+++.||||+++...... .+.+.+|+.+++.++||||+++++++ ..+..++|
T Consensus 17 ~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv 95 (291)
T 1xbb_A 17 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLV 95 (291)
T ss_dssp GEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEE
T ss_pred hhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEE
Confidence 466666 889999999999963 346889999997654322 46799999999999999999999999 56678999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 210 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 210 (491)
|||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 96 ~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 172 (291)
T 1xbb_A 96 MEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 172 (291)
T ss_dssp EECCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCS
T ss_pred EEeCCCCCHHHHHHh--CcCCCHHHHHHHHHHHHHHHHHHHhCC-eEcCCCCcceEEEeCCCcEEEccCCcceeeccCCC
Confidence 999999999999974 456899999999999999999999999 9999999999999999999999999987654332
Q ss_pred ------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHH
Q 011184 211 ------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 283 (491)
Q Consensus 211 ------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (491)
...+++.|+|||.+.+..++.++||||||+++|+|++ |..|+.............. ......+..++.
T Consensus 173 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 247 (291)
T 1xbb_A 173 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK-----GERMGCPAGCPR 247 (291)
T ss_dssp EEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-----TCCCCCCTTCCH
T ss_pred cccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCCH
Confidence 2235678999999988889999999999999999999 9988866543322221111 112234556778
Q ss_pred HHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 284 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 284 ~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
.+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 248 ~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 248 EMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988764
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-43 Score=357.08 Aligned_cols=246 Identities=16% Similarity=0.217 Sum_probs=192.0
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC--CChhHHHHHHHHHhccCCCCcceEEeEeecC------Ce
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEG------DE 127 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~------~~ 127 (491)
..|++++.||+|+||+||+|.. .+++.||||++..... ...+.+.+|+.+++.++||||+++++++... ..
T Consensus 62 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 141 (464)
T 3ttj_A 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 141 (464)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCe
Confidence 4577888999999999999994 4689999999975421 2245788999999999999999999999654 35
Q ss_pred eEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC
Q 011184 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 207 (491)
Q Consensus 128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 207 (491)
.++||||+++ +|.+.+. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 142 ~~lv~E~~~~-~l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~-iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 215 (464)
T 3ttj_A 142 VYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215 (464)
T ss_dssp EEEEEECCSE-EHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCCC----
T ss_pred EEEEEeCCCC-CHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChHhEEEeCCCCEEEEEEEeeeecC
Confidence 7999999974 5767663 34899999999999999999999999 9999999999999999999999999998654
Q ss_pred CC---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccc-------------
Q 011184 208 DG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS------------- 271 (491)
Q Consensus 208 ~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~------------- 271 (491)
.. ....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.............+..+
T Consensus 216 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~ 295 (464)
T 3ttj_A 216 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 295 (464)
T ss_dssp -CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHH
T ss_pred CCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhh
Confidence 43 34578999999999999999999999999999999999999997653221111111000000
Q ss_pred ------------cccCCCC-----------chhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 272 ------------CLEGQFT-----------DDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 272 ------------~~~~~~~-----------~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.....++ ...++++.+|+.+||+.||++|||++++++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 296 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp HHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000001 112678999999999999999999999998
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-43 Score=340.07 Aligned_cols=244 Identities=16% Similarity=0.139 Sum_probs=205.4
Q ss_pred CccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCC---ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
...|.+++.||+|+||.||++... +++.||+|++...... ..+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 356778888999999999999954 5889999998654322 245688999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC---
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--- 208 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--- 208 (491)
|||+++++|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 120 ~e~~~~~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 196 (335)
T 2owb_A 120 LELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 196 (335)
T ss_dssp ECCCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred EecCCCCCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CEecCCCchhEEEcCCCCEEEeeccCceecccCcc
Confidence 999999999998864 357899999999999999999999999 99999999999999999999999999876532
Q ss_pred -CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHH
Q 011184 209 -GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 287 (491)
Q Consensus 209 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (491)
.....+|+.|+|||++.+..++.++||||||+++|+|++|+.||............... ...++..++..+.+
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 270 (335)
T 2owb_A 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN------EYSIPKHINPVAAS 270 (335)
T ss_dssp CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT------CCCCCTTSCHHHHH
T ss_pred cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcC------CCCCCccCCHHHHH
Confidence 23446889999999999888999999999999999999999988765432221111110 11234456678999
Q ss_pred HHHHhccCCCCCCCChhHHHH
Q 011184 288 LASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~ 308 (491)
|+.+||+.||.+|||+.++++
T Consensus 271 li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 271 LIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp HHHHHTCSSGGGSCCGGGGGG
T ss_pred HHHHHccCChhHCcCHHHHhc
Confidence 999999999999999999997
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-43 Score=344.76 Aligned_cols=248 Identities=20% Similarity=0.179 Sum_probs=196.8
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCC-----CCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM-----AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
.|++++.||+|+||+||+|.. .++..||||++... .....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 27 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 106 (345)
T 3hko_A 27 KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLV 106 (345)
T ss_dssp HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred heeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEE
Confidence 467778889999999999995 46889999998542 223456799999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccC--------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHh
Q 011184 132 AEYMPNETLAKHLFHWE--------------------------------------THPMKWAMRLRVVLHLAQALEYCTS 173 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~--------------------------------------~~~l~~~~~~~i~~qi~~~L~~LH~ 173 (491)
|||++||+|.+++.... ...+++..++.++.||+.||.|||+
T Consensus 107 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~ 186 (345)
T 3hko_A 107 MELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN 186 (345)
T ss_dssp EECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999985210 1123577788999999999999999
Q ss_pred CCCcccccccccceeeCCCC--CeEEccCCCcccCCC--------CCccccCCCCCCcccccC--CCCCCCccchhHHHH
Q 011184 174 KGRALYHDLNAYRILFDEDG--NPRLSTFGLMKNSRD--------GKSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTL 241 (491)
Q Consensus 174 ~~~iiH~Dlkp~Nill~~~~--~~kl~Dfgla~~~~~--------~~~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~v 241 (491)
.+ |+||||||+|||++.++ .+||+|||++..... .....||+.|+|||++.+ ..++.++||||||++
T Consensus 187 ~~-ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~i 265 (345)
T 3hko_A 187 QG-ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265 (345)
T ss_dssp TT-EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHH
T ss_pred CC-ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHH
Confidence 99 99999999999998766 899999999875321 234468999999999975 568999999999999
Q ss_pred HHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 242 LLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 242 l~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
+|+|++|+.||................. .........+++.+.+|+.+||+.||.+|||+.++++
T Consensus 266 l~el~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 266 LHLLLMGAVPFPGVNDADTISQVLNKKL--CFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHHCCC--CTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred HHHHHHCCCCCCCCChHHHHHHHHhccc--ccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 9999999999876543322221111111 0011112235678999999999999999999999998
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-43 Score=341.61 Aligned_cols=251 Identities=18% Similarity=0.293 Sum_probs=199.7
Q ss_pred CCccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 55 GFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
.+..|++++.||+|+||.||++... +|+.||||++....... .+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 3567888999999999999999964 58999999986544322 34578999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC--
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 209 (491)
|||+++++|.+++. ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 103 ~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 103 FEFVDHTILDDLEL--FPNGLDYQVVQKYLFQIINGIGFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp EECCSEEHHHHHHH--STTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred EecCCcchHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHHCC-EEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 99999999988765 3457999999999999999999999999 999999999999999999999999998764332
Q ss_pred --CccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccc--------------------c
Q 011184 210 --KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL--------------------Q 266 (491)
Q Consensus 210 --~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~--------------------~ 266 (491)
....+|+.|+|||++.+. .++.++||||||+++|+|++|+.||............. .
T Consensus 180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
T 4aaa_A 180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA 259 (331)
T ss_dssp ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGT
T ss_pred ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccc
Confidence 344688999999999875 68999999999999999999999887653221111000 0
Q ss_pred cccccccc-----CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 267 MLTDSCLE-----GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 267 ~~~~~~~~-----~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
....+... ......++..+.+|+.+||+.||.+|||+.++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 260 GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp TCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000000 0011245678999999999999999999999987
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-43 Score=339.71 Aligned_cols=256 Identities=18% Similarity=0.238 Sum_probs=203.3
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEee----cCCeeEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCC----EGDERLLV 131 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~----~~~~~~lv 131 (491)
..|++++.||+|+||.||++.. .+++.||||++........+.+.+|+.+++.++||||+++++++. .....++|
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 108 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL 108 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEE
Confidence 4578888999999999999995 578999999986544344567899999999999999999999987 33578999
Q ss_pred EecCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC
Q 011184 132 AEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 209 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 209 (491)
|||+++++|.+++... ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 187 (317)
T 2buj_A 109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG-YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIH 187 (317)
T ss_dssp EECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCSSCEESCEE
T ss_pred EEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEcCCCCEEEEecCcchhcccc
Confidence 9999999999988642 2467999999999999999999999998 999999999999999999999999988764321
Q ss_pred -------------CccccCCCCCCcccccCCC---CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccc
Q 011184 210 -------------KSYSTNLAFTPPEYLRTGR---VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 273 (491)
Q Consensus 210 -------------~~~~~t~~y~aPE~~~~~~---~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (491)
....||+.|+|||++.+.. ++.++||||||+++|+|++|+.||...... ............
T Consensus 188 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~~~~ 264 (317)
T 2buj_A 188 VEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK---GDSVALAVQNQL 264 (317)
T ss_dssp EESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT---TSCHHHHHHCC-
T ss_pred cccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc---cchhhHHhhccC
Confidence 1224689999999997654 688999999999999999999887431100 000000000011
Q ss_pred cCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 274 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 274 ~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
....+...+..+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 265 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 265 SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 1112345567899999999999999999999999999988643
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-43 Score=343.35 Aligned_cols=248 Identities=19% Similarity=0.189 Sum_probs=199.1
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccC-----CCCcceEEeEeecCCeeEEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-----NNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----H~niv~~~~~~~~~~~~~lv 131 (491)
.|.+++.||+|+||+||+|.. .+++.||||+++... .....+..|+.+++.++ ||||+++++++...+..++|
T Consensus 36 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv 114 (360)
T 3llt_A 36 AFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLI 114 (360)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEE
T ss_pred EEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEE
Confidence 467778889999999999995 568999999996422 22456788999999996 99999999999999999999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC--------------------
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-------------------- 191 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~-------------------- 191 (491)
|||+ +++|.+++.......+++..+..++.||+.||.|||+.+ |+||||||+|||++.
T Consensus 115 ~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~ 192 (360)
T 3llt_A 115 FEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS-LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQ 192 (360)
T ss_dssp ECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEE
T ss_pred EcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCcccEEEccccccccccchhccccccccc
Confidence 9999 899999997655557999999999999999999999999 999999999999975
Q ss_pred -----CCCeEEccCCCcccCCC-CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccc
Q 011184 192 -----DGNPRLSTFGLMKNSRD-GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL 265 (491)
Q Consensus 192 -----~~~~kl~Dfgla~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~ 265 (491)
++.+||+|||++..... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.............
T Consensus 193 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~ 272 (360)
T 3llt_A 193 IYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMME 272 (360)
T ss_dssp EEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred ccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHH
Confidence 78999999999986543 345678999999999999999999999999999999999999886543221110000
Q ss_pred c---ccc-----------------cccccCCCC--------------------chhHHHHHHHHHHhccCCCCCCCChhH
Q 011184 266 Q---MLT-----------------DSCLEGQFT--------------------DDDGTELVRLASRCLQYEPRERPNPKS 305 (491)
Q Consensus 266 ~---~~~-----------------~~~~~~~~~--------------------~~~~~~~~~li~~cl~~dp~~Rps~~~ 305 (491)
. ... ........+ ...++.+.+|+.+||+.||.+|||+.+
T Consensus 273 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~e 352 (360)
T 3llt_A 273 SIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAE 352 (360)
T ss_dssp HHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred HhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHH
Confidence 0 000 000000000 011267889999999999999999999
Q ss_pred HHH
Q 011184 306 LVT 308 (491)
Q Consensus 306 il~ 308 (491)
+++
T Consensus 353 lL~ 355 (360)
T 3llt_A 353 LLK 355 (360)
T ss_dssp HTT
T ss_pred Hhc
Confidence 986
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-43 Score=344.26 Aligned_cols=247 Identities=18% Similarity=0.258 Sum_probs=194.9
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecCC------e
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGD------E 127 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~~------~ 127 (491)
..|++++.||+|+||+||+|.. .+|+.||||++....... .+.+.+|+.+++.++||||+++++++...+ .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 3577888899999999999995 569999999996543222 356889999999999999999999997653 4
Q ss_pred eEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC
Q 011184 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 207 (491)
Q Consensus 128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 207 (491)
.++||||+ +++|.+++.. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 105 ~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 179 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQAD 179 (367)
T ss_dssp CEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence 69999999 7999999863 56899999999999999999999999 9999999999999999999999999998754
Q ss_pred C-CCccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccc------------------
Q 011184 208 D-GKSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM------------------ 267 (491)
Q Consensus 208 ~-~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~------------------ 267 (491)
. .....+|+.|+|||++.+ ..++.++|||||||++++|++|+.||.+.............
T Consensus 180 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~ 259 (367)
T 1cm8_A 180 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK 259 (367)
T ss_dssp SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred cccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHH
Confidence 3 345578999999999887 67999999999999999999999998765322111110000
Q ss_pred -----cc--cccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 268 -----LT--DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 268 -----~~--~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
+. ............++.+.+|+.+||+.||.+|||+.++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 260 NYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 00 000011223455789999999999999999999999998
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-43 Score=343.69 Aligned_cols=243 Identities=19% Similarity=0.245 Sum_probs=198.4
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEEecC
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
.|++++.||+|+||+||++... +|+.||||++..... ...+|++++.++ +||||+++++++.+++..++||||+
T Consensus 23 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~ 98 (342)
T 2qr7_A 23 GYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELM 98 (342)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred cEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCC
Confidence 5788889999999999999954 589999999975432 345789999888 7999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCC----CCeEEccCCCcccCCCC--
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED----GNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~----~~~kl~Dfgla~~~~~~-- 209 (491)
+||+|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||+.+. +.+||+|||+++.....
T Consensus 99 ~gg~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH~~g-ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~ 175 (342)
T 2qr7_A 99 KGGELLDKILR--QKFFSEREASAVLFTITKTVEYLHAQG-VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG 175 (342)
T ss_dssp CSCBHHHHHHT--CTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC
T ss_pred CCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC
Confidence 99999999873 467999999999999999999999999 9999999999998533 35999999999865332
Q ss_pred --CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCch---hhHhhhccccccccccccCCCCchhHHH
Q 011184 210 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA---LDLIRDRNLQMLTDSCLEGQFTDDDGTE 284 (491)
Q Consensus 210 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (491)
....+|+.|+|||++.+..++.++|||||||++|+|++|..||.... ...+........ .......+..++.+
T Consensus 176 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~s~~ 253 (342)
T 2qr7_A 176 LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGK--FSLSGGYWNSVSDT 253 (342)
T ss_dssp CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCC--CCCCSTTTTTSCHH
T ss_pred ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCC--cccCccccccCCHH
Confidence 24567999999999988778999999999999999999999886421 111111111110 01112234567789
Q ss_pred HHHHHHHhccCCCCCCCChhHHHHH
Q 011184 285 LVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 285 ~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
+.+|+.+||..||.+|||+.++++.
T Consensus 254 ~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 254 AKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred HHHHHHHHCCCChhHCcCHHHHhcC
Confidence 9999999999999999999999873
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=339.91 Aligned_cols=251 Identities=20% Similarity=0.240 Sum_probs=196.0
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCC-----hhHHHHHHHHHhccCCCCcceEEeEeecCCeeE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD-----PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 129 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~ 129 (491)
...|++++.||+|+||.||+|.. .+|+.||||++....... .+.+.+|+.+++.++||||+++++++...+..+
T Consensus 9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 88 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS 88 (346)
T ss_dssp ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence 34567788889999999999995 468999999997533211 346889999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 209 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 209 (491)
+||||++ ++|.+++.. ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 89 lv~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (346)
T 1ua2_A 89 LVFDFME-TDLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165 (346)
T ss_dssp EEEECCS-EEHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred EEEEcCC-CCHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCC-EECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence 9999998 489888864 3356888999999999999999999999 999999999999999999999999998765332
Q ss_pred ----CccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccccc--------cccc----
Q 011184 210 ----KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML--------TDSC---- 272 (491)
Q Consensus 210 ----~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~--------~~~~---- 272 (491)
....+|+.|+|||++.+. .++.++|||||||++|+|++|.+|+.+.............. .+.+
T Consensus 166 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 245 (346)
T 1ua2_A 166 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPD 245 (346)
T ss_dssp CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTT
T ss_pred cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcc
Confidence 345689999999999764 47899999999999999999998877653322111111100 0000
Q ss_pred --ccCC--------CCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 273 --LEGQ--------FTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 273 --~~~~--------~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
.... .....+.++.+|+.+||+.||.+|||+.++++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 246 YVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp CCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000 113456789999999999999999999999983
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-43 Score=337.57 Aligned_cols=254 Identities=21% Similarity=0.294 Sum_probs=198.3
Q ss_pred ccccccccCCCCCccEEEEEEEC----CCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecCC----
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE----NQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGD---- 126 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~~---- 126 (491)
..+.+.+.||+|+||+||+|... ++..||||+++...... .+.+.+|+.++++++||||+++++++...+
T Consensus 34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 113 (313)
T 3brb_A 34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGI 113 (313)
T ss_dssp GGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC------
T ss_pred HHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCC
Confidence 35677788899999999999843 34589999997554322 356899999999999999999999998755
Q ss_pred -eeEEEEecCCCCCHHHHhcc----cCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCC
Q 011184 127 -ERLLVAEYMPNETLAKHLFH----WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 201 (491)
Q Consensus 127 -~~~lv~e~~~~gsL~~~l~~----~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg 201 (491)
..++||||+++++|.+++.. .....+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||
T Consensus 114 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kl~Dfg 192 (313)
T 3brb_A 114 PKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN-FLHRDLAARNCMLRDDMTVCVADFG 192 (313)
T ss_dssp -CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCSGGGEEECTTSCEEECSCS
T ss_pred cccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEEeecC
Confidence 35999999999999999842 13457999999999999999999999999 9999999999999999999999999
Q ss_pred CcccCCCC------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhcccccccccccc
Q 011184 202 LMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 274 (491)
Q Consensus 202 la~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (491)
++...... ....+++.|+|||.+.+..++.++||||||+++|+|++ |..|+............... ..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~ 267 (313)
T 3brb_A 193 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHG-----HR 267 (313)
T ss_dssp CC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT-----CC
T ss_pred cceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcC-----CC
Confidence 98765332 23346778999999998889999999999999999999 77777654332222111111 11
Q ss_pred CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 275 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 275 ~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
...+..++..+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 268 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 268 LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 223445668999999999999999999999999999988654
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-43 Score=333.46 Aligned_cols=251 Identities=22% Similarity=0.277 Sum_probs=202.7
Q ss_pred ccccccccCCCCCccEEEEEEECC----CCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLEN----QRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
..+.+.+.||+|+||+||+|...+ +..||||.+..... ...+.+.+|+.+++.++||||+++++++.. +..++|
T Consensus 12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v 90 (281)
T 3cc6_A 12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWII 90 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEE
T ss_pred cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEE
Confidence 456777888999999999998532 33599999876432 235678999999999999999999999865 457899
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC--
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 209 (491)
|||+++++|.+++.. ....+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++......
T Consensus 91 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 168 (281)
T 3cc6_A 91 MELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAYLESIN-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 168 (281)
T ss_dssp EECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEEETTEEEECCCCGGGCC-----
T ss_pred EecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCccceEEECCCCcEEeCccCCCcccccccc
Confidence 999999999999964 2356899999999999999999999999 999999999999999999999999998765432
Q ss_pred ---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHH
Q 011184 210 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 285 (491)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (491)
....+++.|+|||++.+..++.++||||||+++|+|++ |+.||.............. ......+..+++.+
T Consensus 169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l 243 (281)
T 3cc6_A 169 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEK-----GDRLPKPDLCPPVL 243 (281)
T ss_dssp ----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHH-----TCCCCCCTTCCHHH
T ss_pred cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhc-----CCCCCCCCCCCHHH
Confidence 23346778999999998889999999999999999998 9988754332221111111 01112344566789
Q ss_pred HHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 286 VRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 244 ~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 244 YTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 999999999999999999999999987754
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-43 Score=340.21 Aligned_cols=251 Identities=18% Similarity=0.240 Sum_probs=193.7
Q ss_pred cCCccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEE
Q 011184 54 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 54 ~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
..+..|++++.||+|+||+||++.. .+++.||||+++...... ...+.+|+.++++++||||+++++++..++..++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 3456788899999999999999994 468999999997544222 4567899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceee-----CCCCCeEEccCCCccc
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF-----DEDGNPRLSTFGLMKN 205 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill-----~~~~~~kl~Dfgla~~ 205 (491)
||||++ ++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||++..
T Consensus 111 v~e~~~-~~L~~~~~~--~~~~~~~~~~~i~~ql~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDK--NPDVSMRVIKSFLYQLINGVNFCHSRR-CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp EEECCS-EEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred EEecCC-CCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 999998 699999874 456999999999999999999999999 9999999999999 4555699999999875
Q ss_pred CCC----CCccccCCCCCCcccccCCC-CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccc--ccc------
Q 011184 206 SRD----GKSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT--DSC------ 272 (491)
Q Consensus 206 ~~~----~~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~--~~~------ 272 (491)
... .....+|+.|+|||++.+.. ++.++|||||||++|+|++|..||................. ...
T Consensus 187 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (329)
T 3gbz_A 187 FGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVT 266 (329)
T ss_dssp HC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred cCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhh
Confidence 432 23345799999999998754 89999999999999999999998876533221111111000 000
Q ss_pred ----ccCC------------CCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 273 ----LEGQ------------FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 273 ----~~~~------------~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.... ++..++.++.+|+.+||+.||.+|||+.++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 267 ALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp GSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0000 01125578999999999999999999999987
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=332.76 Aligned_cols=243 Identities=18% Similarity=0.266 Sum_probs=205.4
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
.+++++.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 102 (303)
T 3a7i_A 23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 102 (303)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeC
Confidence 367778889999999999995 4689999999975442 34578999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----Cc
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 211 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 211 (491)
++++|.+++. ..++++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++...... ..
T Consensus 103 ~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 178 (303)
T 3a7i_A 103 GGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEK-KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 178 (303)
T ss_dssp TTEEHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCC
T ss_pred CCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChheEEECCCCCEEEeecccceecCccccccCc
Confidence 9999999984 467999999999999999999999999 999999999999999999999999998764432 34
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
..+|+.|+|||++.+..++.++||||||+++|+|++|..|+............. .......+..++..+.+|+.+
T Consensus 179 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~li~~ 253 (303)
T 3a7i_A 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP-----KNNPPTLEGNYSKPLKEFVEA 253 (303)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH-----HSCCCCCCSSCCHHHHHHHHH
T ss_pred cCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhh-----cCCCCCCccccCHHHHHHHHH
Confidence 468899999999998899999999999999999999998886543222111110 011223344566789999999
Q ss_pred hccCCCCCCCChhHHHHH
Q 011184 292 CLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~~ 309 (491)
||+.||.+|||+.++++.
T Consensus 254 ~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 254 CLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp HCCSSGGGSCCHHHHTTC
T ss_pred HcCCChhhCcCHHHHhhC
Confidence 999999999999999874
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=346.16 Aligned_cols=255 Identities=19% Similarity=0.280 Sum_probs=206.3
Q ss_pred CccccccccCCCCCccEEEEEEECC-C-----CEEEEEEeCCCCCC-ChhHHHHHHHHHhcc-CCCCcceEEeEeecCCe
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLEN-Q-----RRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDE 127 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~ 127 (491)
...+.+++.||+|+||+||+|.... + ..||||.+...... ..+.+.+|+.+++.+ +||||+++++++..++.
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 124 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence 3567788888999999999999532 3 47999999754322 245688999999999 89999999999999999
Q ss_pred eEEEEecCCCCCHHHHhcccC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCe
Q 011184 128 RLLVAEYMPNETLAKHLFHWE------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP 195 (491)
Q Consensus 128 ~~lv~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~ 195 (491)
.++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+
T Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~ 203 (333)
T 2i1m_A 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN-CIHRDVAARNVLLTNGHVA 203 (333)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGCEEEGGGEE
T ss_pred eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC-cccCCcccceEEECCCCeE
Confidence 999999999999999986421 346899999999999999999999999 9999999999999999999
Q ss_pred EEccCCCcccCCCC------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhcccccc
Q 011184 196 RLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQML 268 (491)
Q Consensus 196 kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~ 268 (491)
||+|||++...... ....+|+.|+|||++.+..++.++||||||+++|+|+| |..|+........... .
T Consensus 204 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~----~ 279 (333)
T 2i1m_A 204 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK----L 279 (333)
T ss_dssp EBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHH----H
T ss_pred EECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHH----H
Confidence 99999998754322 22345778999999998899999999999999999999 8877765322111111 1
Q ss_pred ccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 269 TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
.........+...+..+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 280 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 280 VKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp HHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 11111122344456789999999999999999999999999987654
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-42 Score=337.48 Aligned_cols=255 Identities=19% Similarity=0.241 Sum_probs=199.4
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeec--------
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCE-------- 124 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~-------- 124 (491)
...|++++.||+|+||+||+|.. .+|+.||||++...... ....+.+|+.+++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 46788999999999999999996 56899999998654322 24578899999999999999999999877
Q ss_pred CCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcc
Q 011184 125 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 204 (491)
Q Consensus 125 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 204 (491)
.+..++||||++ ++|.+.+.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.
T Consensus 96 ~~~~~lv~e~~~-~~l~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 96 KGSIYLVFDFCE-HDLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp -CEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CceEEEEEeccC-CCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 346899999998 578777754 3356999999999999999999999999 9999999999999999999999999987
Q ss_pred cCCC--------CCccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccc---ccccc
Q 011184 205 NSRD--------GKSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM---LTDSC 272 (491)
Q Consensus 205 ~~~~--------~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~---~~~~~ 272 (491)
.... .....||+.|+|||++.+. .++.++|||||||++|+|++|..||.+............. .....
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 252 (351)
T 3mi9_A 173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV 252 (351)
T ss_dssp ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred cccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhh
Confidence 5432 1234578999999998764 4799999999999999999999988765432211111000 00000
Q ss_pred cc---------------CCCC---c-----hhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 273 LE---------------GQFT---D-----DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 273 ~~---------------~~~~---~-----~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
.. .... . ..++.+.+|+.+||+.||.+|||+.++++ ..+..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~--hp~f~ 316 (351)
T 3mi9_A 253 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN--HDFFW 316 (351)
T ss_dssp STTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT--SGGGG
T ss_pred ccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC--CCCcC
Confidence 00 0000 0 01467899999999999999999999998 34443
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=367.53 Aligned_cols=244 Identities=19% Similarity=0.261 Sum_probs=209.0
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCC---CCCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~l 130 (491)
...++++..||+|+||.||++.. .+++.||||+++.. .......+..|..++..+ +||||+.+++++...+..||
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l 419 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence 56788899999999999999995 45889999999642 223456788999999988 79999999999999999999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC---
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR--- 207 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~--- 207 (491)
||||++||+|.+++.. ...+++..++.++.||+.||.|||+++ ||||||||+||||+.+|.+||+|||+++...
T Consensus 420 V~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~ 496 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG 496 (674)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTS-EECCCCCSTTEEECSSSCEEECCCTTCEECCCTT
T ss_pred EEeCcCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeccCChhhEEEcCCCcEEEeecceeeccccCC
Confidence 9999999999999974 357999999999999999999999999 9999999999999999999999999998532
Q ss_pred -CCCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHH
Q 011184 208 -DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 208 -~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
......||+.|+|||++.+..++.++|||||||++|||++|..||.......+....... ...++..++.++.
T Consensus 497 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~ 570 (674)
T 3pfq_A 497 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH------NVAYPKSMSKEAV 570 (674)
T ss_dssp CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSS------CCCCCTTSCHHHH
T ss_pred cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhC------CCCCCccCCHHHH
Confidence 223567899999999999999999999999999999999999999876544433332221 1235567788999
Q ss_pred HHHHHhccCCCCCCCCh-----hHHHH
Q 011184 287 RLASRCLQYEPRERPNP-----KSLVT 308 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~-----~~il~ 308 (491)
+||.+||+.||.+||++ ++|++
T Consensus 571 ~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 571 AICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp HHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred HHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 99999999999999998 66665
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-42 Score=331.14 Aligned_cols=245 Identities=16% Similarity=0.138 Sum_probs=205.7
Q ss_pred CccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCC---ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
...|.+++.||+|+||.||++... +++.||+|++...... ..+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 346778888999999999999964 5889999998654322 245688999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC---
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--- 208 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--- 208 (491)
|||+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++.....
T Consensus 94 ~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 170 (294)
T 2rku_A 94 LELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170 (294)
T ss_dssp EECCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred EecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence 999999999998864 357899999999999999999999999 99999999999999999999999999876432
Q ss_pred -CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHH
Q 011184 209 -GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 287 (491)
Q Consensus 209 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (491)
.....+|+.|+|||.+.+..++.++||||||+++|+|++|..|+............... ....+...+..+.+
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 244 (294)
T 2rku_A 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN------EYSIPKHINPVAAS 244 (294)
T ss_dssp CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT------CCCCCTTSCHHHHH
T ss_pred ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhc------cCCCccccCHHHHH
Confidence 23346889999999999888999999999999999999999988765433221111110 11234456688999
Q ss_pred HHHHhccCCCCCCCChhHHHHH
Q 011184 288 LASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~ 309 (491)
++.+||+.||.+|||+.++++.
T Consensus 245 li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 245 LIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp HHHHHTCSSGGGSCCGGGGGGS
T ss_pred HHHHHcccChhhCcCHHHHhhC
Confidence 9999999999999999999973
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-43 Score=335.67 Aligned_cols=247 Identities=18% Similarity=0.221 Sum_probs=199.3
Q ss_pred ccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
..+++++.||+|+||.||+|... +++.||+|++..........+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (302)
T 2j7t_A 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFC 98 (302)
T ss_dssp GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECC
T ss_pred cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeC
Confidence 35778888999999999999964 58999999998766666788999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccC----CCCCc
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS----RDGKS 211 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~----~~~~~ 211 (491)
++++|.+++.. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++... .....
T Consensus 99 ~~~~l~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 176 (302)
T 2j7t_A 99 PGGAVDAIMLE-LDRGLTEPQIQVVCRQMLEALNFLHSKR-IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS 176 (302)
T ss_dssp TTEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC---
T ss_pred CCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHHHEEECCCCCEEEEECCCCcccccccccccc
Confidence 99999998864 2456999999999999999999999999 999999999999999999999999986532 12234
Q ss_pred cccCCCCCCcccc-----cCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHH
Q 011184 212 YSTNLAFTPPEYL-----RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 212 ~~~t~~y~aPE~~-----~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
..+|+.|+|||++ .+..++.++||||||+++|+|++|..|+................ ......+..++..+.
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~ 253 (302)
T 2j7t_A 177 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSD---PPTLLTPSKWSVEFR 253 (302)
T ss_dssp --CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC---CCCCSSGGGSCHHHH
T ss_pred ccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccC---CcccCCccccCHHHH
Confidence 5689999999998 35678999999999999999999998886543322111111110 111122345668899
Q ss_pred HHHHHhccCCCCCCCChhHHHH
Q 011184 287 RLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~ 308 (491)
+++.+||+.||.+|||+.++++
T Consensus 254 ~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 254 DFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp HHHHHHSCSCTTTSCCHHHHTT
T ss_pred HHHHHHcccChhhCCCHHHHhc
Confidence 9999999999999999999977
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=355.45 Aligned_cols=246 Identities=20% Similarity=0.204 Sum_probs=203.4
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCC--CCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRM--AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
.|++++.||+|+||+||++... +++.||||++... .......+.+|++++++++||||+++++++...+..++||||
T Consensus 23 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 102 (486)
T 3mwu_A 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGEL 102 (486)
T ss_dssp HEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred ceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEc
Confidence 5788889999999999999954 6899999998532 223467899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeC---CCCCeEEccCCCcccCCCC--
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD---EDGNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~---~~~~~kl~Dfgla~~~~~~-- 209 (491)
++|++|.+.+.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||++......
T Consensus 103 ~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 179 (486)
T 3mwu_A 103 YTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179 (486)
T ss_dssp CCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC--
T ss_pred CCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCc
Confidence 999999998864 357999999999999999999999999 99999999999995 5567999999999765433
Q ss_pred -CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHH
Q 011184 210 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 288 (491)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (491)
....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.....+.......... ........++.++.+|
T Consensus 180 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~l 256 (486)
T 3mwu_A 180 MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYA--FDLPQWRTISDDAKDL 256 (486)
T ss_dssp --CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--SCSGGGGGSCHHHHHH
T ss_pred cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CCCcccCCCCHHHHHH
Confidence 34568999999999975 5899999999999999999999998765443322221111110 0011123566889999
Q ss_pred HHHhccCCCCCCCChhHHHHH
Q 011184 289 ASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~ 309 (491)
|.+||+.||.+|||+.++++.
T Consensus 257 i~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 257 IRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp HHHHTCSSTTTSCCHHHHHHC
T ss_pred HHHHcCCChhhCcCHHHHhcC
Confidence 999999999999999999983
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-43 Score=331.37 Aligned_cols=246 Identities=16% Similarity=0.196 Sum_probs=201.7
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCC------ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP------DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
.+++++.||+|+||+||++... +++.||||+++..... ..+.+.+|+.++++++||||+++++++...+..++
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 85 (283)
T 3bhy_A 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVL 85 (283)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEE
Confidence 3677888899999999999965 6899999998654322 35679999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC----CeEEccCCCcccC
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG----NPRLSTFGLMKNS 206 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfgla~~~ 206 (491)
||||+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+||+++.++ .+||+|||++...
T Consensus 86 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~ 162 (283)
T 3bhy_A 86 ILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHSKR-IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 162 (283)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEeecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChHHEEEecCCCCCCceEEEecccceec
Confidence 9999999999999964 357899999999999999999999999 99999999999998877 8999999998765
Q ss_pred CCC---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHH
Q 011184 207 RDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 283 (491)
Q Consensus 207 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (491)
... ....+++.|+|||++.+..++.++||||||+++|+|++|..|+.................. .........+.
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 240 (283)
T 3bhy_A 163 EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYD--FDEEYFSNTSE 240 (283)
T ss_dssp C--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCC--CCHHHHTTCCH
T ss_pred cCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccC--CcchhcccCCH
Confidence 433 2345889999999999889999999999999999999999988765433222111111000 00011123457
Q ss_pred HHHHHHHHhccCCCCCCCChhHHHH
Q 011184 284 ELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 284 ~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.+.+++.+||+.||.+|||+.++++
T Consensus 241 ~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 241 LAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHccCCHhHCcCHHHHHh
Confidence 8999999999999999999999997
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=337.91 Aligned_cols=248 Identities=15% Similarity=0.140 Sum_probs=202.4
Q ss_pred cccc-ccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCC--ChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEEe
Q 011184 59 ENIV-SEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP--DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 59 ~~~i-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e 133 (491)
+.++ +.||+|+||+||++... +++.||||++...... ....+.+|+.++..+ +||||+++++++...+..++|||
T Consensus 30 y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e 109 (327)
T 3lm5_A 30 YILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILE 109 (327)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred EeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEE
Confidence 4444 67899999999999954 5899999999754322 356789999999999 57999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC---CCCeEEccCCCcccCCCC-
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRDG- 209 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~~~- 209 (491)
|+++|+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++. ++.+||+|||++......
T Consensus 110 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g-ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~ 188 (327)
T 3lm5_A 110 YAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN-IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC 188 (327)
T ss_dssp CCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC----
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCcCChHHEEEecCCCCCcEEEeeCccccccCCcc
Confidence 999999999986544577999999999999999999999999 999999999999987 789999999999865433
Q ss_pred --CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHH
Q 011184 210 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 287 (491)
Q Consensus 210 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (491)
....||+.|+|||++.+..++.++||||||+++|+|++|+.||................ ..........++..+.+
T Consensus 189 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~ 266 (327)
T 3lm5_A 189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVN--VDYSEETFSSVSQLATD 266 (327)
T ss_dssp -----CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC--CCCCTTTTTTSCHHHHH
T ss_pred ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcc--cccCchhhcccCHHHHH
Confidence 34568999999999999999999999999999999999999987654332221111111 11122233456788999
Q ss_pred HHHHhccCCCCCCCChhHHHHH
Q 011184 288 LASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~ 309 (491)
|+.+||+.||.+|||++++++.
T Consensus 267 li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 267 FIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HHHHHSCSSGGGSCCHHHHTTC
T ss_pred HHHHHcCCChhhCcCHHHHhCC
Confidence 9999999999999999999873
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=332.38 Aligned_cols=246 Identities=17% Similarity=0.228 Sum_probs=199.4
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCC
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 137 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~ 137 (491)
+.....||+|+||.||+|.. .+++.||||.+........+.+.+|+.+++.++||||+++++++...+..++||||+++
T Consensus 24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 103 (295)
T 2clq_A 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPG 103 (295)
T ss_dssp TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCC
Confidence 33445679999999999995 56889999999876555567899999999999999999999999999999999999999
Q ss_pred CCHHHHhcccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC-CCCeEEccCCCcccCCC----CCc
Q 011184 138 ETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRD----GKS 211 (491)
Q Consensus 138 gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla~~~~~----~~~ 211 (491)
++|.+++.... ...+++..+..++.||+.||.|||+++ ++||||||+||+++. ++.+||+|||++..... ...
T Consensus 104 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 182 (295)
T 2clq_A 104 GSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET 182 (295)
T ss_dssp EEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CC
T ss_pred CCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC-EEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccc
Confidence 99999997532 235678899999999999999999999 999999999999987 89999999999876543 234
Q ss_pred cccCCCCCCcccccCCC--CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 289 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~--~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 289 (491)
..||+.|+|||++.+.. ++.++||||||+++|+|++|+.||........... ..........++..++.++.+++
T Consensus 183 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~li 259 (295)
T 2clq_A 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF---KVGMFKVHPEIPESMSAEAKAFI 259 (295)
T ss_dssp CCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHH---HHHHHCCCCCCCTTSCHHHHHHH
T ss_pred cCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHH---hhccccccccccccCCHHHHHHH
Confidence 56889999999997654 78899999999999999999988754221111000 00001112234556778999999
Q ss_pred HHhccCCCCCCCChhHHHH
Q 011184 290 SRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~ 308 (491)
.+||+.||++|||+.+++.
T Consensus 260 ~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 260 LKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp HHTTCSSTTTSCCHHHHHT
T ss_pred HHHccCChhhCCCHHHHhc
Confidence 9999999999999999987
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-43 Score=344.39 Aligned_cols=250 Identities=19% Similarity=0.223 Sum_probs=202.5
Q ss_pred ccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
..+++++.||+|+||+||++... ++..||+|++...... ..+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 45788899999999999999964 6899999999764322 245789999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccccceeeCCCCCeEEccCCCcccCC--CCCc
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR--DGKS 211 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~--~~~~ 211 (491)
++|++|.+++.. ...+++..+..++.|++.||.|||++ + |+||||||+|||++.++.+||+|||++.... ....
T Consensus 113 ~~~~~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 189 (360)
T 3eqc_A 113 MDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 189 (360)
T ss_dssp CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHC-CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC---
T ss_pred CCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHhCC-EEcCCccHHHEEECCCCCEEEEECCCCcccccccccC
Confidence 999999999964 35689999999999999999999996 8 9999999999999999999999999986432 2234
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccc--------------------------
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL-------------------------- 265 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~-------------------------- 265 (491)
..||+.|+|||++.+..++.++||||||+++|+|++|+.||.............
T Consensus 190 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (360)
T 3eqc_A 190 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGM 269 (360)
T ss_dssp -CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------------
T ss_pred CCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccccccc
Confidence 578999999999999899999999999999999999999886543322111000
Q ss_pred ------------cccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 266 ------------QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 266 ------------~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
..+............++.++.+|+.+||+.||.+|||++++++.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 270 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp ----CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 00000001111122356789999999999999999999999973
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-43 Score=346.21 Aligned_cols=250 Identities=18% Similarity=0.235 Sum_probs=202.5
Q ss_pred CccccccccCCCCCccEEEEEEE----CCCCEEEEEEeCCCC----CCChhHHHHHHHHHhcc-CCCCcceEEeEeecCC
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL----ENQRRIAVKRFNRMA----WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGD 126 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~ 126 (491)
...+++++.||+|+||+||++.. .+++.||||+++... ......+.+|++++..+ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 34678888899999999999996 368999999996432 12345678899999999 6999999999999999
Q ss_pred eeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccC
Q 011184 127 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 206 (491)
Q Consensus 127 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 206 (491)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 209 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEF 209 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred eEEEEeecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence 99999999999999999974 356899999999999999999999999 999999999999999999999999998764
Q ss_pred CCC-----CccccCCCCCCcccccCC--CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCc
Q 011184 207 RDG-----KSYSTNLAFTPPEYLRTG--RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 279 (491)
Q Consensus 207 ~~~-----~~~~~t~~y~aPE~~~~~--~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (491)
... ....||+.|+|||++.+. .++.++|||||||++|+|++|+.||...............+.. ....++.
T Consensus 210 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~ 287 (355)
T 1vzo_A 210 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK--SEPPYPQ 287 (355)
T ss_dssp CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH--CCCCCCT
T ss_pred ccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhc--cCCCCCc
Confidence 322 234689999999999863 4788999999999999999999988643211100000011111 1123455
Q ss_pred hhHHHHHHHHHHhccCCCCCCC-----ChhHHHHHh
Q 011184 280 DDGTELVRLASRCLQYEPRERP-----NPKSLVTAL 310 (491)
Q Consensus 280 ~~~~~~~~li~~cl~~dp~~Rp-----s~~~il~~L 310 (491)
.++..+.+||.+||+.||.+|| |++++++..
T Consensus 288 ~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 288 EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred ccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 6778899999999999999999 899998753
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-42 Score=354.85 Aligned_cols=246 Identities=16% Similarity=0.192 Sum_probs=199.5
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCC--CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
.|++++.||+|+||+||+|... ++..||||++.... ......+.+|+.+++.++||||++++++|...+..++||||
T Consensus 38 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 117 (494)
T 3lij_A 38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMEC 117 (494)
T ss_dssp HEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence 4788889999999999999954 68899999997543 23456799999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC---CCCeEEccCCCcccCCCC--
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~~~-- 209 (491)
++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++. ++.+||+|||++......
T Consensus 118 ~~~g~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~ 194 (494)
T 3lij_A 118 YKGGELFDEIIH--RMKFNEVDAAVIIKQVLSGVTYLHKHN-IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK 194 (494)
T ss_dssp CCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBC
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCcc
Confidence 999999998864 356899999999999999999999999 999999999999975 455999999998765433
Q ss_pred -CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHH
Q 011184 210 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 288 (491)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (491)
....||+.|+|||++. ..++.++|||||||++|+|++|..||.......+.......... ........+++.+.+|
T Consensus 195 ~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~l 271 (494)
T 3lij_A 195 MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYT--FDSPEWKNVSEGAKDL 271 (494)
T ss_dssp BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCSGGGTTSCHHHHHH
T ss_pred ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CCchhcccCCHHHHHH
Confidence 3456899999999986 56999999999999999999999998765543332222111110 0011123456789999
Q ss_pred HHHhccCCCCCCCChhHHHHH
Q 011184 289 ASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~ 309 (491)
+.+||+.||.+|||+.++++.
T Consensus 272 i~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 272 IKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp HHHHTCSSTTTSCCHHHHHTC
T ss_pred HHHHCCCChhhCccHHHHhcC
Confidence 999999999999999999863
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-43 Score=334.63 Aligned_cols=251 Identities=15% Similarity=0.167 Sum_probs=203.5
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEe-ecCCeeEEEEecC
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCC-CEGDERLLVAEYM 135 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~-~~~~~~~lv~e~~ 135 (491)
.+++++.||+|+||.||+|.. .+++.||||++.... ....+.+|+.+++.++|++++..+..+ ..++..++||||+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 87 (296)
T 3uzp_A 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 87 (296)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred EEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence 567778889999999999995 678999999986543 345789999999999988766655554 6677889999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceee---CCCCCeEEccCCCcccCCCC---
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDG--- 209 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~--- 209 (491)
+++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||++......
T Consensus 88 -~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (296)
T 3uzp_A 88 -GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164 (296)
T ss_dssp -CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred -CCCHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccc
Confidence 8999999964 3457999999999999999999999999 9999999999999 48899999999998764332
Q ss_pred --------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchh-------hHhhhcccccccccccc
Q 011184 210 --------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-------DLIRDRNLQMLTDSCLE 274 (491)
Q Consensus 210 --------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 274 (491)
....||+.|+|||.+.+..++.++||||||+++|+|++|+.||..... ..+........ .
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-----~ 239 (296)
T 3uzp_A 165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-----I 239 (296)
T ss_dssp CBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC-----H
T ss_pred cccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc-----h
Confidence 344689999999999998999999999999999999999998864211 11111100000 0
Q ss_pred CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccCC
Q 011184 275 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 318 (491)
Q Consensus 275 ~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~ 318 (491)
...+..+++++.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus 240 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 283 (296)
T 3uzp_A 240 EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence 01123456789999999999999999999999999999877654
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=355.91 Aligned_cols=246 Identities=18% Similarity=0.165 Sum_probs=205.0
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCC---CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
.|++++.||+|+||+||++... +|+.||||++.... ......+.+|+.++++++||||+++++++...+..++|||
T Consensus 27 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 106 (484)
T 3nyv_A 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGE 106 (484)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEe
Confidence 4778888999999999999954 68999999996543 2346779999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceee---CCCCCeEEccCCCcccCCCCC
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDGK 210 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~~ 210 (491)
|+.|++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||++.......
T Consensus 107 ~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 183 (484)
T 3nyv_A 107 VYTGGELFDEIIS--RKRFSEVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 183 (484)
T ss_dssp CCCSCBHHHHHHT--CSCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC
T ss_pred cCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc
Confidence 9999999998873 467999999999999999999999999 9999999999999 567899999999987654432
Q ss_pred ---ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHH
Q 011184 211 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 287 (491)
Q Consensus 211 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (491)
...||+.|+|||++.+ .++.++|||||||++|+|++|..||.................. ........+++.+.+
T Consensus 184 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~ 260 (484)
T 3nyv_A 184 KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT--FELPQWKKVSESAKD 260 (484)
T ss_dssp SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC--CCSGGGGGSCHHHHH
T ss_pred ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC--CCCcccccCCHHHHH
Confidence 3468999999999975 6899999999999999999999998765443322221111110 001112356789999
Q ss_pred HHHHhccCCCCCCCChhHHHHH
Q 011184 288 LASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~ 309 (491)
||.+||+.||.+|||+.++++.
T Consensus 261 li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 261 LIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp HHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHCCCChhHCcCHHHHhhC
Confidence 9999999999999999999973
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-42 Score=331.46 Aligned_cols=245 Identities=19% Similarity=0.187 Sum_probs=199.6
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC----CCChhHHHHHHHHHhccCCCCcceEEeEee--cCCeeE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA----WPDPRQFLEEARSVGQLRNNRLTNLLGCCC--EGDERL 129 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~~~~~~~--~~~~~~ 129 (491)
..|++++.||+|+||.||++.. .+++.||||+++... ......+.+|+.+++.++||||+++++++. ..+..+
T Consensus 5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (305)
T 2wtk_C 5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY 84 (305)
T ss_dssp CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence 4677888889999999999995 568999999996432 223567999999999999999999999984 456789
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 209 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 209 (491)
+||||++++ |.+++.......+++..+..++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++......
T Consensus 85 lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~-i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 162 (305)
T 2wtk_C 85 MVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG-IVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162 (305)
T ss_dssp EEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred EEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCcccEEEcCCCcEEeeccccccccCcc
Confidence 999999865 777776555678999999999999999999999999 999999999999999999999999998765321
Q ss_pred ------CccccCCCCCCcccccCCC--CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchh
Q 011184 210 ------KSYSTNLAFTPPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 281 (491)
Q Consensus 210 ------~~~~~t~~y~aPE~~~~~~--~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (491)
....+|+.|+|||++.+.. .+.++||||||+++|+|++|..|+............... ...++..+
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~------~~~~~~~~ 236 (305)
T 2wtk_C 163 AADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKG------SYAIPGDC 236 (305)
T ss_dssp CSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC------CCCCCSSS
T ss_pred ccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcC------CCCCCCcc
Confidence 2345789999999997644 477999999999999999999998765433322211111 11234456
Q ss_pred HHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 282 GTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 282 ~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
+..+.+++.+||+.||.+|||+.++++.
T Consensus 237 ~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 237 GPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 7889999999999999999999999974
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-42 Score=328.59 Aligned_cols=246 Identities=19% Similarity=0.170 Sum_probs=201.4
Q ss_pred ccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
..+++++.||+|+||.||+|... +++.||||++..... ...+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 35678888899999999999964 689999999864332 2356789999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC------
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------ 208 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~------ 208 (491)
+++++|.+++. ....+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++.....
T Consensus 87 ~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 163 (276)
T 2yex_A 87 CSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (276)
T ss_dssp CTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred cCCCcHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhc
Confidence 99999999986 3457899999999999999999999999 99999999999999999999999999875422
Q ss_pred CCccccCCCCCCcccccCCCC-CCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHH
Q 011184 209 GKSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 287 (491)
Q Consensus 209 ~~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (491)
.....+|+.|+|||.+.+..+ +.++||||||+++|+|++|..||........... .+.............+..+.+
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 240 (276)
T 2yex_A 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---DWKEKKTYLNPWKKIDSAPLA 240 (276)
T ss_dssp BCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHH---HHHTTCTTSTTGGGSCHHHHH
T ss_pred ccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHH---HhhhcccccCchhhcCHHHHH
Confidence 234468899999999987665 7799999999999999999998865322110000 000000111112356678999
Q ss_pred HHHHhccCCCCCCCChhHHHH
Q 011184 288 LASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~ 308 (491)
++.+||+.||.+|||+.++++
T Consensus 241 li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 241 LLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp HHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHCCCCchhCCCHHHHhc
Confidence 999999999999999999987
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-42 Score=331.76 Aligned_cols=245 Identities=16% Similarity=0.211 Sum_probs=200.3
Q ss_pred ccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
..+++++.||+|+||.||+|... +|+.||||++.... ....+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 29 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 106 (314)
T 3com_A 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYC 106 (314)
T ss_dssp -CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecC
Confidence 45778888999999999999964 58999999997543 4578999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----Cc
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 211 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~ 211 (491)
++++|.+++.. ....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||++...... ..
T Consensus 107 ~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 184 (314)
T 3com_A 107 GAGSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFMR-KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 184 (314)
T ss_dssp TTEEHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCC
T ss_pred CCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCc
Confidence 99999999863 2467899999999999999999999999 999999999999999999999999998764332 34
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
..+|+.|+|||.+.+..++.++||||||+++|+|++|..|+.............. ........+..++..+.+|+.+
T Consensus 185 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~li~~ 261 (314)
T 3com_A 185 VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPT---NPPPTFRKPELWSDNFTDFVKQ 261 (314)
T ss_dssp CCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH---SCCCCCSSGGGSCHHHHHHHHH
T ss_pred cCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhc---CCCcccCCcccCCHHHHHHHHH
Confidence 4678999999999988899999999999999999999988865432211110000 0011112234456889999999
Q ss_pred hccCCCCCCCChhHHHH
Q 011184 292 CLQYEPRERPNPKSLVT 308 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~ 308 (491)
||+.||.+|||+.++++
T Consensus 262 ~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 262 CLVKSPEQRATATQLLQ 278 (314)
T ss_dssp HTCSCTTTSCCHHHHTT
T ss_pred HccCChhhCcCHHHHHh
Confidence 99999999999999987
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-43 Score=340.69 Aligned_cols=256 Identities=20% Similarity=0.260 Sum_probs=196.3
Q ss_pred CCccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHh--ccCCCCcceEEeEeec-----CCe
Q 011184 55 GFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVG--QLRNNRLTNLLGCCCE-----GDE 127 (491)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~--~l~H~niv~~~~~~~~-----~~~ 127 (491)
++..+++++.||+|+||+||+|+. +++.||||++... ....+..|.+++. .++||||+++++.+.. ...
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred ChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 456788889999999999999987 6799999998643 2445555555544 5899999999985432 235
Q ss_pred eEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhC---------CCcccccccccceeeCCCCCeEEc
Q 011184 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK---------GRALYHDLNAYRILFDEDGNPRLS 198 (491)
Q Consensus 128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---------~~iiH~Dlkp~Nill~~~~~~kl~ 198 (491)
.++||||+++|+|.+++.. ...++..+..++.||+.||.|||+. + |+||||||+|||++.++.+||+
T Consensus 87 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~-ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSL---HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA-ISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC-EECSSCSGGGEEECTTSCEEEC
T ss_pred EEEEEecCCCCcHHHHHhh---cccchhHHHHHHHHHHHHHHHHHhhhccccccccc-eeecccccceEEEcCCCcEEEe
Confidence 7899999999999999953 4568999999999999999999999 8 9999999999999999999999
Q ss_pred cCCCcccCCCC------------CccccCCCCCCcccccC-------CCCCCCccchhHHHHHHHHHhCCCCCCCc-hhh
Q 011184 199 TFGLMKNSRDG------------KSYSTNLAFTPPEYLRT-------GRVTPESVIYSFGTLLLDLLSGKHIPPSH-ALD 258 (491)
Q Consensus 199 Dfgla~~~~~~------------~~~~~t~~y~aPE~~~~-------~~~~~~~Dv~slG~vl~elltg~~~~~~~-~~~ 258 (491)
|||+++..... ....||+.|+|||++.+ ..++.++|||||||++|||++|..|+... ...
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 242 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence 99999754321 13458999999999986 34667899999999999999997654321 100
Q ss_pred H-----------------hhhccccccccccccCC--CCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccCC
Q 011184 259 L-----------------IRDRNLQMLTDSCLEGQ--FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 318 (491)
Q Consensus 259 ~-----------------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~ 318 (491)
. ...........+..... .....+..+.+||.+||+.||++|||+.++++.|+.+.....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~ 321 (336)
T 3g2f_A 243 EYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWE 321 (336)
T ss_dssp CCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred HHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHH
Confidence 0 00000000001111111 123467789999999999999999999999999998876543
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-43 Score=350.37 Aligned_cols=259 Identities=14% Similarity=0.150 Sum_probs=207.7
Q ss_pred ccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCC-CCChhHHHHHHHHHhccCCCCcceEEeEeecCC--eeEEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD--ERLLVA 132 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~--~~~lv~ 132 (491)
..|.+++.||+|+||+||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 35778889999999999999964 58999999997533 234567889999999999999999999998755 679999
Q ss_pred ecCCCCCHHHHhcccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceee----CCCCCeEEccCCCcccCC
Q 011184 133 EYMPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF----DEDGNPRLSTFGLMKNSR 207 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill----~~~~~~kl~Dfgla~~~~ 207 (491)
||++||+|.+++..... ..+++..++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++...
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~ 167 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC-EEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence 99999999999975322 24899999999999999999999999 9999999999999 778889999999998654
Q ss_pred CC---CccccCCCCCCcccccC--------CCCCCCccchhHHHHHHHHHhCCCCCCCchh----hHhhhccccccc---
Q 011184 208 DG---KSYSTNLAFTPPEYLRT--------GRVTPESVIYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNLQMLT--- 269 (491)
Q Consensus 208 ~~---~~~~~t~~y~aPE~~~~--------~~~~~~~Dv~slG~vl~elltg~~~~~~~~~----~~~~~~~~~~~~--- 269 (491)
.. ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ............
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~ 247 (396)
T 4eut_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA 247 (396)
T ss_dssp CGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTC
T ss_pred CCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCccc
Confidence 43 24568999999999865 4577899999999999999999988743211 000000000000
Q ss_pred ----------------cccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 270 ----------------DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 270 ----------------~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
.......++..++..+.+++.+||+.||++|||+.++++.++.+...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred chhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 00111234467888999999999999999999999999999887654
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-42 Score=338.26 Aligned_cols=255 Identities=20% Similarity=0.296 Sum_probs=204.9
Q ss_pred ccccccccCCCCCccEEEEEEE------CCCCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 129 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~ 129 (491)
..+++++.||+|+||.||+|.. .++..||||++..... .....+.+|+.++++++||||+++++++...+..+
T Consensus 30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (327)
T 2yfx_A 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 109 (327)
T ss_dssp GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcE
Confidence 4567888899999999999983 2467899999964332 22457889999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHhcccCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC---CCCeEEccCC
Q 011184 130 LVAEYMPNETLAKHLFHWET-----HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFG 201 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfg 201 (491)
+||||+++++|.+++..... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||
T Consensus 110 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-i~H~dlkp~NIli~~~~~~~~~kl~Dfg 188 (327)
T 2yfx_A 110 ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFG 188 (327)
T ss_dssp EEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred EEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-eecCcCCHhHEEEecCCCcceEEECccc
Confidence 99999999999999975322 35889999999999999999999999 999999999999984 4569999999
Q ss_pred CcccCC------CCCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhcccccccccccc
Q 011184 202 LMKNSR------DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 274 (491)
Q Consensus 202 la~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (491)
++.... ......+|+.|+|||++.+..++.++||||||+++|+|++ |..|+............... ..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~-----~~ 263 (327)
T 2yfx_A 189 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG-----GR 263 (327)
T ss_dssp HHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT-----CC
T ss_pred cccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcC-----CC
Confidence 886432 2233456889999999998899999999999999999998 88777654433222211111 11
Q ss_pred CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccC
Q 011184 275 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 275 ~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
...+..++..+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 264 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 264 MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 2234456789999999999999999999999999999887654
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-43 Score=337.89 Aligned_cols=256 Identities=22% Similarity=0.298 Sum_probs=206.3
Q ss_pred CccccccccCCCCCccEEEEEEE------CCCCEEEEEEeCCCCCC-ChhHHHHHHHHHhcc-CCCCcceEEeEeecCC-
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGD- 126 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~- 126 (491)
...+++++.||+|+||+||+|.. .+++.||||+++..... ..+.+.+|+.++.++ +||||+++++++...+
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 105 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 105 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence 35677888899999999999983 24688999999764422 235688999999999 7999999999987754
Q ss_pred eeEEEEecCCCCCHHHHhcccCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCC
Q 011184 127 ERLLVAEYMPNETLAKHLFHWET--------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 192 (491)
Q Consensus 127 ~~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~ 192 (491)
..++||||+++++|.+++..... ..+++..++.++.||+.||.|||+.+ |+||||||+||+++.+
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dikp~Nil~~~~ 184 (316)
T 2xir_A 106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEK 184 (316)
T ss_dssp CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGG
T ss_pred ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEECCC
Confidence 58999999999999999975322 12789999999999999999999999 9999999999999999
Q ss_pred CCeEEccCCCcccCCCCC------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccc
Q 011184 193 GNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNL 265 (491)
Q Consensus 193 ~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~ 265 (491)
+.+||+|||++....... ...+|+.|+|||++.+..++.++||||||+++|+|++ |..|+.............
T Consensus 185 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~ 264 (316)
T 2xir_A 185 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264 (316)
T ss_dssp GCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHH
T ss_pred CCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHh
Confidence 999999999987654322 2346788999999998899999999999999999998 888876533211110000
Q ss_pred cccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 266 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
. .......+...++.+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 265 ~----~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 265 K----EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp H----HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred c----cCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 0 0111223445667899999999999999999999999999887653
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=348.98 Aligned_cols=247 Identities=18% Similarity=0.220 Sum_probs=192.2
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecC-----CeeE
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEG-----DERL 129 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~-----~~~~ 129 (491)
.|.+++.||+|+||+||+|.. .+++.||||++...... ..+.+.+|+.+|+.++||||+++++++... +..|
T Consensus 27 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 106 (432)
T 3n9x_A 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELY 106 (432)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred CEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEE
Confidence 577888899999999999995 45889999999754322 245789999999999999999999999776 5689
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 209 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 209 (491)
+||||+. ++|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 107 lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~g-ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 182 (432)
T 3n9x_A 107 IVLEIAD-SDLKKLFK--TPIFLTEEHIKTILYNLLLGENFIHESG-IIHRDLKPANCLLNQDCSVKVCDFGLARTINSE 182 (432)
T ss_dssp EEEECCS-EEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEEC---
T ss_pred EEEecCC-cCHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCHHHeEECCCCCEEEccCCCccccccc
Confidence 9999996 69999996 3467999999999999999999999999 999999999999999999999999999864321
Q ss_pred --------------------------CccccCCCCCCcccc-cCCCCCCCccchhHHHHHHHHHhCCCC-----------
Q 011184 210 --------------------------KSYSTNLAFTPPEYL-RTGRVTPESVIYSFGTLLLDLLSGKHI----------- 251 (491)
Q Consensus 210 --------------------------~~~~~t~~y~aPE~~-~~~~~~~~~Dv~slG~vl~elltg~~~----------- 251 (491)
....||+.|+|||++ .+..++.++|||||||++|||++|..|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~ 262 (432)
T 3n9x_A 183 KDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPL 262 (432)
T ss_dssp ----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCS
T ss_pred ccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccccccccccc
Confidence 345689999999986 455699999999999999999985433
Q ss_pred CCCchh------------------hHhh------------------hcccccccccccc-C-----CCCchhHHHHHHHH
Q 011184 252 PPSHAL------------------DLIR------------------DRNLQMLTDSCLE-G-----QFTDDDGTELVRLA 289 (491)
Q Consensus 252 ~~~~~~------------------~~~~------------------~~~~~~~~~~~~~-~-----~~~~~~~~~~~~li 289 (491)
|++... ..+. ............. . ......++++.+|+
T Consensus 263 f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl 342 (432)
T 3n9x_A 263 FPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLL 342 (432)
T ss_dssp CCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHH
T ss_pred CCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHH
Confidence 322110 0000 0000000000000 0 00124568899999
Q ss_pred HHhccCCCCCCCChhHHHH
Q 011184 290 SRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~ 308 (491)
.+||+.||.+|||++++++
T Consensus 343 ~~mL~~dP~~R~ta~e~L~ 361 (432)
T 3n9x_A 343 ESMLKFNPNKRITIDQALD 361 (432)
T ss_dssp HHHSCSSTTTSCCHHHHHT
T ss_pred HHHhcCCcccCCCHHHHhc
Confidence 9999999999999999998
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-43 Score=334.26 Aligned_cols=255 Identities=15% Similarity=0.160 Sum_probs=201.3
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEe-ecCCeeEEEEecC
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCC-CEGDERLLVAEYM 135 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~-~~~~~~~lv~e~~ 135 (491)
.+++++.||+|+||+||+|.. .+++.||||++.... ....+.+|+.+++.++|++++..+..+ ..++..++||||+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 87 (296)
T 4hgt_A 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 87 (296)
T ss_dssp -CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred ceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc
Confidence 466777889999999999995 568999999876443 234688999999999888766665554 6677889999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceee---CCCCCeEEccCCCcccCCCC---
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDG--- 209 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~--- 209 (491)
+++|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||++......
T Consensus 88 -~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~ 164 (296)
T 4hgt_A 88 -GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164 (296)
T ss_dssp -CCBHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred -CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccC
Confidence 8999999864 3457999999999999999999999999 9999999999999 78899999999998764332
Q ss_pred --------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccc---cccCCCC
Q 011184 210 --------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS---CLEGQFT 278 (491)
Q Consensus 210 --------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 278 (491)
....||+.|+|||.+.+..++.++||||||+++|+|++|+.||.......... ....+... .......
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 243 (296)
T 4hgt_A 165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ-KYERISEKKMSTPIEVLC 243 (296)
T ss_dssp CBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS-HHHHHHHHHHHSCHHHHT
T ss_pred ccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhh-hhhhhhcccccchhhhhh
Confidence 24468899999999999899999999999999999999999886532110000 00000000 0000112
Q ss_pred chhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccCC
Q 011184 279 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 318 (491)
Q Consensus 279 ~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~ 318 (491)
..++..+.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus 244 ~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 244 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred ccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 3345789999999999999999999999999999877644
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-42 Score=334.38 Aligned_cols=252 Identities=19% Similarity=0.294 Sum_probs=186.2
Q ss_pred CccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCC-CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 56 FAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
...+++++.||+|+||+||++. ..+++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK 93 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence 4567788889999999999999 4568999999986543 2335678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhccc------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC
Q 011184 134 YMPNETLAKHLFHW------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 207 (491)
Q Consensus 134 ~~~~gsL~~~l~~~------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 207 (491)
|+++++|.+++... ....+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++....
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 172 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG-QIHRDVKAGNILLGEDGSVQIADFGVSAFLA 172 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCHHHHHCC
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCCCCCChhhEEEcCCCCEEEEeccchheec
Confidence 99999999998631 2456899999999999999999999999 9999999999999999999999999886543
Q ss_pred CC---------CccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhh----ccccccccccc
Q 011184 208 DG---------KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD----RNLQMLTDSCL 273 (491)
Q Consensus 208 ~~---------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~----~~~~~~~~~~~ 273 (491)
.. ....+|+.|+|||++.+ ..++.++||||||+++|+|++|+.||.......... ...........
T Consensus 173 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (303)
T 2vwi_A 173 TGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQ 252 (303)
T ss_dssp ---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC---
T ss_pred cCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccc
Confidence 21 23468899999999876 468999999999999999999999886543221111 11111111111
Q ss_pred cCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 274 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 274 ~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
........+.++.+++.+||+.||.+|||+.++++
T Consensus 253 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 253 DKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp --CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 12233456678999999999999999999999987
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-42 Score=355.46 Aligned_cols=247 Identities=15% Similarity=0.160 Sum_probs=201.0
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC-------------CChhHHHHHHHHHhccCCCCcceEEeEe
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-------------PDPRQFLEEARSVGQLRNNRLTNLLGCC 122 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~H~niv~~~~~~ 122 (491)
..|.+++.||+|+||+||+|.. .+++.||||++..... ...+.+.+|+.++++++||||+++++++
T Consensus 36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 115 (504)
T 3q5i_A 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF 115 (504)
T ss_dssp GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 4577888999999999999995 4588999999965431 2346789999999999999999999999
Q ss_pred ecCCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC---CeEEcc
Q 011184 123 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG---NPRLST 199 (491)
Q Consensus 123 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~---~~kl~D 199 (491)
...+..++||||++||+|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|
T Consensus 116 ~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~D 192 (504)
T 3q5i_A 116 EDKKYFYLVTEFYEGGELFEQIIN--RHKFDECDAANIMKQILSGICYLHKHN-IVHRDIKPENILLENKNSLLNIKIVD 192 (504)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESSTTCCSSEEECC
T ss_pred EcCCEEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCcHHHEEEecCCCCccEEEEE
Confidence 999999999999999999998864 357999999999999999999999999 99999999999998775 699999
Q ss_pred CCCcccCCCC---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCC
Q 011184 200 FGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 276 (491)
Q Consensus 200 fgla~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (491)
||++...... ....||+.|+|||++. +.++.++|||||||++|+|++|..||.+.....+........... ...
T Consensus 193 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~--~~~ 269 (504)
T 3q5i_A 193 FGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYF--DFN 269 (504)
T ss_dssp CTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC--CHH
T ss_pred CCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC--Ccc
Confidence 9999865443 3456899999999987 568999999999999999999999987654433322211111000 000
Q ss_pred CCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 277 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 277 ~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
....++.++.+|+.+||+.||.+|||++++++.
T Consensus 270 ~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 270 DWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 112456789999999999999999999999873
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-43 Score=330.76 Aligned_cols=252 Identities=17% Similarity=0.211 Sum_probs=204.0
Q ss_pred CccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEee--cCCeeEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCC--EGDERLL 130 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~--~~~~~~l 130 (491)
...+++++.||+|+||.||++... +++.||+|++...... ..+.+.+|+.++++++||||+++++++. ..+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 456788889999999999999954 6899999999754432 2456889999999999999999999874 4578999
Q ss_pred EEecCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCC----cccccccccceeeCCCCCeEEccCCCcc
Q 011184 131 VAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGR----ALYHDLNAYRILFDEDGNPRLSTFGLMK 204 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~----iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 204 (491)
||||+++++|.+++... ....+++..++.++.|++.||.|||+.+. ++||||||+||+++.++.+||+|||++.
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999999998642 23458999999999999999999999753 9999999999999999999999999987
Q ss_pred cCCCCC----ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCch
Q 011184 205 NSRDGK----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 280 (491)
Q Consensus 205 ~~~~~~----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (491)
...... ...+|+.|+|||.+.+..++.++||||||+++|+|++|..|+.......+....... ....++..
T Consensus 165 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~ 239 (279)
T 2w5a_A 165 ILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG-----KFRRIPYR 239 (279)
T ss_dssp HC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-----CCCCCCTT
T ss_pred eeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhc-----ccccCCcc
Confidence 654432 345789999999999888999999999999999999999888765433222211111 11233445
Q ss_pred hHHHHHHHHHHhccCCCCCCCChhHHHHHhcc
Q 011184 281 DGTELVRLASRCLQYEPRERPNPKSLVTALSP 312 (491)
Q Consensus 281 ~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~ 312 (491)
.+.++.+++.+||+.||.+|||+.++++.+..
T Consensus 240 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 240 YSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred cCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 67899999999999999999999999986543
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-42 Score=327.00 Aligned_cols=245 Identities=19% Similarity=0.248 Sum_probs=198.8
Q ss_pred CccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCC---CCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
...+.+++.||+|+||.||+|... +|+.||||++... .......+.+|+.+++.++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 346778888999999999999965 6899999998642 123456789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC--
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 209 (491)
|||+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++......
T Consensus 90 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 166 (276)
T 2h6d_A 90 MEYVSGGELFDYICK--HGRVEEMEARRLFQQILSAVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 166 (276)
T ss_dssp EECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHC-SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---
T ss_pred EeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChhhEEECCCCCEEEeecccccccCCCcc
Confidence 999999999999964 356899999999999999999999999 999999999999999999999999998765443
Q ss_pred -CccccCCCCCCcccccCCCC-CCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHH
Q 011184 210 -KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 287 (491)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (491)
....+++.|+|||.+.+..+ +.++||||||+++|+|++|..|+............... ....+...+..+.+
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~ 240 (276)
T 2h6d_A 167 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG------VFYIPEYLNRSVAT 240 (276)
T ss_dssp ----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHH
T ss_pred eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcC------cccCchhcCHHHHH
Confidence 23467899999999987665 68999999999999999999988765433222211111 11234455678999
Q ss_pred HHHHhccCCCCCCCChhHHHHH
Q 011184 288 LASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~ 309 (491)
++.+||+.||.+|||+.++++.
T Consensus 241 li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 241 LLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHccCChhhCCCHHHHHhC
Confidence 9999999999999999999983
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-43 Score=366.36 Aligned_cols=243 Identities=21% Similarity=0.258 Sum_probs=201.1
Q ss_pred cCCCCCccEEEEEEE---CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCC
Q 011184 64 EHGEKAPNVVYKGKL---ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 138 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~g 138 (491)
.||+|+||+||+|.+ .+++.||||+++..... ..+.+.+|++++++++|||||++++++.. +..++||||+++|
T Consensus 376 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~g 454 (635)
T 4fl3_A 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELG 454 (635)
T ss_dssp EEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTE
T ss_pred EeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCCC
Confidence 689999999999974 24678999999754322 24679999999999999999999999965 5588999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-------c
Q 011184 139 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-------S 211 (491)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~-------~ 211 (491)
+|.+++.. ...+++..++.|+.||+.||.|||+++ ||||||||+||||+.++.+||+|||+++...... .
T Consensus 455 ~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~yLH~~~-iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 531 (635)
T 4fl3_A 455 PLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 531 (635)
T ss_dssp EHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----------
T ss_pred CHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHHHHCC-EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccC
Confidence 99999963 457999999999999999999999999 9999999999999999999999999987654322 2
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
..+|+.|+|||++.+..++.++|||||||++|||++ |+.||.......+....... .....+..++.++.+||.
T Consensus 532 ~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~-----~~~~~p~~~~~~l~~li~ 606 (635)
T 4fl3_A 532 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG-----ERMGCPAGCPREMYDLMN 606 (635)
T ss_dssp ---CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-----CCCCCCTTCCHHHHHHHH
T ss_pred CCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHHHHH
Confidence 235678999999998899999999999999999998 99888765443322221111 122345567789999999
Q ss_pred HhccCCCCCCCChhHHHHHhccccc
Q 011184 291 RCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
+||+.||++|||+.+|++.|+.+..
T Consensus 607 ~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 607 LCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp HHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 9999999999999999999987654
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=340.92 Aligned_cols=246 Identities=12% Similarity=0.134 Sum_probs=202.4
Q ss_pred ccccccccCCCCCccEEEEEE------ECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccC---CCCcceEEeEeecCCe
Q 011184 57 AVENIVSEHGEKAPNVVYKGK------LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR---NNRLTNLLGCCCEGDE 127 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~~~~~~~~~~~ 127 (491)
..+.+++.||+|+||+||+|+ ..+++.||||+++.. ....+.+|++++..++ |+||+++++++..++.
T Consensus 65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~ 141 (365)
T 3e7e_A 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNG 141 (365)
T ss_dssp SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSC
T ss_pred EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCC
Confidence 456777888999999999994 446889999999753 4667888999998886 9999999999999999
Q ss_pred eEEEEecCCCCCHHHHhccc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC-----------CC
Q 011184 128 RLLVAEYMPNETLAKHLFHW---ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-----------DG 193 (491)
Q Consensus 128 ~~lv~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~-----------~~ 193 (491)
.++||||++||+|.+++... ....+++..++.|+.||+.||.|||+++ ||||||||+|||++. ++
T Consensus 142 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~-ivHrDiKp~NIll~~~~~~~~~~~~~~~ 220 (365)
T 3e7e_A 142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE-IIHGDIKPDNFILGNGFLEQDDEDDLSA 220 (365)
T ss_dssp EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECGGGTCC------CT
T ss_pred cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC-eecCCCCHHHEEecccccCccccccccC
Confidence 99999999999999999642 2457999999999999999999999999 999999999999998 89
Q ss_pred CeEEccCCCcccCC---C---CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccc
Q 011184 194 NPRLSTFGLMKNSR---D---GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM 267 (491)
Q Consensus 194 ~~kl~Dfgla~~~~---~---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~ 267 (491)
.+||+|||+++... . .....||+.|+|||++.+..++.++|||||||++|||+||+.||.........
T Consensus 221 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~------ 294 (365)
T 3e7e_A 221 GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK------ 294 (365)
T ss_dssp TEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE------
T ss_pred CEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee------
Confidence 99999999996432 1 13446899999999999989999999999999999999999887543221100
Q ss_pred cccccccCCCCchhHHHHHHHHHHhccCCCCCC-CChhHHHHHhcccccc
Q 011184 268 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRER-PNPKSLVTALSPLQKE 316 (491)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~R-ps~~~il~~L~~~~~~ 316 (491)
..... ... ..+..+.+++..||+.+|.+| |+++++.+.|+.+...
T Consensus 295 -~~~~~-~~~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 295 -PEGLF-RRL--PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp -ECSCC-TTC--SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred -echhc-ccc--CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 00111 111 235788999999999999999 6888888888877653
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-43 Score=349.25 Aligned_cols=241 Identities=15% Similarity=0.187 Sum_probs=188.7
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC--------CCChhHHHHHHHHHhccCCCCcceEEeEeecCCee
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA--------WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 128 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~ 128 (491)
.|.+++.||+|+||+||+|.. .+++.||||++.... ......+.+|+.+|++++||||+++++++.. +..
T Consensus 136 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~ 214 (419)
T 3i6u_A 136 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-EDY 214 (419)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-SEE
T ss_pred cEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-Cce
Confidence 467778889999999999995 458999999986422 1123358899999999999999999999854 568
Q ss_pred EEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCC---CCeEEccCCCccc
Q 011184 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED---GNPRLSTFGLMKN 205 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~---~~~kl~Dfgla~~ 205 (491)
++||||+++|+|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++.
T Consensus 215 ~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~ 291 (419)
T 3i6u_A 215 YIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 291 (419)
T ss_dssp EEEEECCTTCBGGGGTS--SSCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSSSCCEEECCSSTTTS
T ss_pred EEEEEcCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCCCcceEEEeeccccee
Confidence 99999999999999886 3467999999999999999999999999 9999999999999754 4599999999987
Q ss_pred CCCC---CccccCCCCCCcccccC---CCCCCCccchhHHHHHHHHHhCCCCCCCchhh-----Hhhhcccccccccccc
Q 011184 206 SRDG---KSYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-----LIRDRNLQMLTDSCLE 274 (491)
Q Consensus 206 ~~~~---~~~~~t~~y~aPE~~~~---~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 274 (491)
.... ....||+.|+|||++.+ ..++.++|||||||++|+|++|..||...... .+........
T Consensus 292 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~------ 365 (419)
T 3i6u_A 292 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI------ 365 (419)
T ss_dssp CC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCC------
T ss_pred cCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCC------
Confidence 5543 34568999999999864 56788999999999999999999988653211 1111111000
Q ss_pred CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 275 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 275 ~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
......++..+.+|+.+||+.||.+|||+.++++
T Consensus 366 ~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 366 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred chhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 0011235678999999999999999999999998
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-44 Score=353.06 Aligned_cols=239 Identities=15% Similarity=0.124 Sum_probs=187.9
Q ss_pred ccccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCC---CCChhHHHHHH---HHHhccCCCCcceEE-------eEe
Q 011184 57 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA---WPDPRQFLEEA---RSVGQLRNNRLTNLL-------GCC 122 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~---~~l~~l~H~niv~~~-------~~~ 122 (491)
..+.+++.||+|+||+||+|+ ..+|+.||||++.... ....+.+.+|+ ++++.++||||++++ +++
T Consensus 73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~ 152 (377)
T 3byv_A 73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 152 (377)
T ss_dssp EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence 457778899999999999999 4569999999997432 22356789999 455556899999998 655
Q ss_pred ecCC-----------------eeEEEEecCCCCCHHHHhcccCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCCcccc
Q 011184 123 CEGD-----------------ERLLVAEYMPNETLAKHLFHWET-----HPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180 (491)
Q Consensus 123 ~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~ 180 (491)
...+ ..++||||+ +|+|.+++..... ..+++..++.|+.||+.||.|||+++ |+||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHr 230 (377)
T 3byv_A 153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-LVHT 230 (377)
T ss_dssp ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT-EECS
T ss_pred hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC-eecC
Confidence 5443 278999999 6899999974211 12335888899999999999999999 9999
Q ss_pred cccccceeeCCCCCeEEccCCCcccCCCC-CccccCCCCCCcccccCC-----------CCCCCccchhHHHHHHHHHhC
Q 011184 181 DLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTG-----------RVTPESVIYSFGTLLLDLLSG 248 (491)
Q Consensus 181 Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~~-----------~~~~~~Dv~slG~vl~elltg 248 (491)
||||+|||++.++.+||+|||+++..... ....| +.|+|||++.+. .++.++|||||||++|||++|
T Consensus 231 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg 309 (377)
T 3byv_A 231 YLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCA 309 (377)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHS
T ss_pred CCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHC
Confidence 99999999999999999999999865432 23456 999999999887 799999999999999999999
Q ss_pred CCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 249 KHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
+.||......... ..+.. ....+++++.+|+.+||+.||.+|||+.++++
T Consensus 310 ~~Pf~~~~~~~~~----~~~~~------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 310 DLPITKDAALGGS----EWIFR------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp SCCC------CCS----GGGGS------SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred CCCCcccccccch----hhhhh------hccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 9988654321111 11111 12345678999999999999999999999986
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-42 Score=337.85 Aligned_cols=246 Identities=19% Similarity=0.193 Sum_probs=200.4
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCC--------hhHHHHHHHHHhcc-CCCCcceEEeEeecCCe
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD--------PRQFLEEARSVGQL-RNNRLTNLLGCCCEGDE 127 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~ 127 (491)
.|+++..||.|+||.||+|... +|+.||||++....... .+.+.+|+.++.++ +||||+++++++...+.
T Consensus 95 ~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 174 (365)
T 2y7j_A 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSF 174 (365)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSE
T ss_pred hcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCE
Confidence 4677788899999999999964 69999999987544221 34578999999999 79999999999999999
Q ss_pred eEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC
Q 011184 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 207 (491)
Q Consensus 128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 207 (491)
.++||||++|++|.+++.. ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++....
T Consensus 175 ~~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~g-i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~ 251 (365)
T 2y7j_A 175 MFLVFDLMRKGELFDYLTE--KVALSEKETRSIMRSLLEAVSFLHANN-IVHRDLKPENILLDDNMQIRLSDFGFSCHLE 251 (365)
T ss_dssp EEEEECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEEecCcccccC
Confidence 9999999999999999964 357999999999999999999999999 9999999999999999999999999987654
Q ss_pred CC---CccccCCCCCCcccccC------CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCC
Q 011184 208 DG---KSYSTNLAFTPPEYLRT------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 278 (491)
Q Consensus 208 ~~---~~~~~t~~y~aPE~~~~------~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (491)
.. ....||+.|+|||++.+ ..++.++|||||||++|+|++|..||..................... ...
T Consensus 252 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~--~~~ 329 (365)
T 2y7j_A 252 PGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSS--PEW 329 (365)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCH--HHH
T ss_pred CCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC--ccc
Confidence 33 34568999999999863 35888999999999999999999988654332221111111000000 001
Q ss_pred chhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 279 DDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 279 ~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
...+..+.+++.+||+.||.+|||+.++++
T Consensus 330 ~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 330 DDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp SSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 234568999999999999999999999997
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-42 Score=339.72 Aligned_cols=247 Identities=15% Similarity=0.211 Sum_probs=191.1
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecCC------e
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGD------E 127 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~------~ 127 (491)
..|++++.||+|+||+||+|.. .+++.||||++...... ....+.+|+.+++.++||||+++++++...+ .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 4577888899999999999995 46889999999754322 2356889999999999999999999997665 6
Q ss_pred eEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC
Q 011184 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 207 (491)
Q Consensus 128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 207 (491)
.++||||++ ++|.+.+. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 105 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 178 (371)
T 2xrw_A 105 VYIVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178 (371)
T ss_dssp EEEEEECCS-EEHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred eEEEEEcCC-CCHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence 899999997 67888884 35899999999999999999999999 9999999999999999999999999998654
Q ss_pred CC---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccccccccc------------
Q 011184 208 DG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC------------ 272 (491)
Q Consensus 208 ~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~------------ 272 (491)
.. ....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.............+..+.
T Consensus 179 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 258 (371)
T 2xrw_A 179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVR 258 (371)
T ss_dssp -----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHH
T ss_pred cccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHH
Confidence 32 345689999999999998899999999999999999999999876533221111111100000
Q ss_pred ---------------------ccCC---CCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 273 ---------------------LEGQ---FTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 273 ---------------------~~~~---~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
.... .....+.++.+|+.+||+.||.+|||++++++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 259 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 0000 011236789999999999999999999999983
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-42 Score=334.20 Aligned_cols=243 Identities=16% Similarity=0.214 Sum_probs=197.6
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccC-CCCcceEEeEeec--CCeeEEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNRLTNLLGCCCE--GDERLLVA 132 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~--~~~~~lv~ 132 (491)
..|++++.||+|+||+||+|.. .+++.||||+++.. ..+.+.+|+.++++++ ||||+++++++.. ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 5678889999999999999994 56899999999743 4678999999999997 9999999999987 56789999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC-CeEEccCCCcccCCCC--
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~~-- 209 (491)
||+++++|.+++. .+++..+..++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++.....
T Consensus 113 e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~ 186 (330)
T 3nsz_A 113 EHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 186 (330)
T ss_dssp ECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC
T ss_pred eccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc
Confidence 9999999999884 3889999999999999999999999 99999999999999776 8999999999765432
Q ss_pred -CccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhh--Hhh----------------hcc-----
Q 011184 210 -KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALD--LIR----------------DRN----- 264 (491)
Q Consensus 210 -~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~--~~~----------------~~~----- 264 (491)
....+|..|+|||++.+ ..++.++|||||||++|+|++|+.||...... ... ...
T Consensus 187 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (330)
T 3nsz_A 187 YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 266 (330)
T ss_dssp CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCT
T ss_pred cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcccccc
Confidence 34467889999999987 56899999999999999999999887432110 000 000
Q ss_pred ---------ccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 265 ---------LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 265 ---------~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.............+..++.++.+||.+||+.||.+|||++++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 267 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred chhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000001111222336789999999999999999999999998
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-42 Score=333.37 Aligned_cols=253 Identities=19% Similarity=0.267 Sum_probs=201.1
Q ss_pred CccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCC--CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
+..+++++.||+|+||.||+|...+ .||+|+++.... ...+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 5677888999999999999999754 499999875432 234568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC-----
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----- 208 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----- 208 (491)
|++|++|.+++.. ....+++..++.++.||+.||.|||+++ ++||||||+||+++ ++.+||+|||++.....
T Consensus 110 ~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~ 186 (319)
T 2y4i_B 110 LCKGRTLYSVVRD-AKIVLDVNKTRQIAQEIVKGMGYLHAKG-ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGR 186 (319)
T ss_dssp CCCSEEHHHHTTS-SCCCCCSHHHHHHHHHHHHHHHHHHHTT-CCCCCCCSTTEEEC---CCEECCCSCCC---------
T ss_pred cccCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCChhhEEEe-CCCEEEeecCCccccccccccc
Confidence 9999999999964 2346899999999999999999999999 99999999999998 67999999999765321
Q ss_pred ----CCccccCCCCCCcccccC---------CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccC
Q 011184 209 ----GKSYSTNLAFTPPEYLRT---------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 275 (491)
Q Consensus 209 ----~~~~~~t~~y~aPE~~~~---------~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (491)
.....|++.|+|||++.+ ..++.++||||||+++|+|++|+.||................. ..
T Consensus 187 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~----~~ 262 (319)
T 2y4i_B 187 REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMK----PN 262 (319)
T ss_dssp -CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCC----CC
T ss_pred cccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCC----CC
Confidence 123357889999999874 3478899999999999999999998876544332221111111 11
Q ss_pred CCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccC
Q 011184 276 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 276 ~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
.....++.++.+++.+||..||.+|||+.++++.|+.+....
T Consensus 263 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 263 LSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp CCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred CCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 112235568999999999999999999999999999998754
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-42 Score=347.78 Aligned_cols=248 Identities=16% Similarity=0.211 Sum_probs=199.7
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhcc------CCCCcceEEeEeecCCeeEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL------RNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~H~niv~~~~~~~~~~~~~l 130 (491)
.|++++.||+|+||+||+|.. .+++.||||+++... .....+.+|+.+++.+ .|+||+++++++...+..++
T Consensus 98 ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l 176 (429)
T 3kvw_A 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICM 176 (429)
T ss_dssp TEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEE
T ss_pred cEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEE
Confidence 477888999999999999995 458999999996432 1245678899998887 56799999999999999999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCC--eEEccCCCcccCCC
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN--PRLSTFGLMKNSRD 208 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~--~kl~Dfgla~~~~~ 208 (491)
||||+. ++|.+++.......+++..+..++.||+.||.|||+++ |+||||||+|||++.++. +||+|||++.....
T Consensus 177 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~ 254 (429)
T 3kvw_A 177 TFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR-IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ 254 (429)
T ss_dssp EECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT-EECSCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred EEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEccCCCcceEEeecccceecCC
Confidence 999996 79999987655567999999999999999999999999 999999999999999887 99999999876543
Q ss_pred -CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccc-----------------ccc
Q 011184 209 -GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM-----------------LTD 270 (491)
Q Consensus 209 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~-----------------~~~ 270 (491)
.....+|+.|+|||++.+..++.++|||||||++|||++|..||.+............. ..+
T Consensus 255 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~ 334 (429)
T 3kvw_A 255 RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVS 334 (429)
T ss_dssp CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBC
T ss_pred cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccC
Confidence 34557899999999999989999999999999999999999888765322111000000 000
Q ss_pred --------------------------------cc----ccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 271 --------------------------------SC----LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 271 --------------------------------~~----~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
+. ....++...++.+.+||.+||+.||.+|||+.++++
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~ 408 (429)
T 3kvw_A 335 SKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALR 408 (429)
T ss_dssp TTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhC
Confidence 00 000011123578999999999999999999999998
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=342.02 Aligned_cols=247 Identities=18% Similarity=0.237 Sum_probs=182.3
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecC------Ce
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEG------DE 127 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~------~~ 127 (491)
..|++++.||+|+||+||+|.. .+|+.||||++...... ..+.+.+|+.+++.++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 3577888999999999999994 56899999999754322 245788999999999999999999998654 56
Q ss_pred eEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC
Q 011184 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 207 (491)
Q Consensus 128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 207 (491)
.++|||++ +++|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 109 ~~lv~e~~-~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~ 183 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTA 183 (367)
T ss_dssp CEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECC--------
T ss_pred EEEEeccc-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence 79999999 689998884 367999999999999999999999999 9999999999999999999999999998654
Q ss_pred C-CCccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccc----------------
Q 011184 208 D-GKSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT---------------- 269 (491)
Q Consensus 208 ~-~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~---------------- 269 (491)
. .....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.............+.
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~ 263 (367)
T 2fst_X 184 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 263 (367)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHH
T ss_pred ccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHH
Confidence 3 344578999999999987 5689999999999999999999999876533211111100000
Q ss_pred ---cc---ccc---CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 270 ---DS---CLE---GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 270 ---~~---~~~---~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.. ... .......++.+.+|+.+||+.||.+|||+.++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 264 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp HHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 00 000 0011234578999999999999999999999997
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=336.26 Aligned_cols=247 Identities=13% Similarity=0.200 Sum_probs=197.4
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhcc-CCCCcceEEeEeec------CCe
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCE------GDE 127 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~------~~~ 127 (491)
...+++++.||+|+||.||+|.. .+++.||||++.... .....+.+|+.+++++ +||||+++++++.. .+.
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~ 101 (326)
T 2x7f_A 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ 101 (326)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccce
Confidence 34567778889999999999995 568999999987543 3457899999999999 89999999999976 467
Q ss_pred eEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCC
Q 011184 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 207 (491)
Q Consensus 128 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~ 207 (491)
.++||||+++++|.+++.......+++..++.++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++....
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 180 (326)
T 2x7f_A 102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 180 (326)
T ss_dssp EEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCTTTC---
T ss_pred EEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCcHHHEEEcCCCCEEEeeCcCceecC
Confidence 899999999999999997544467999999999999999999999999 9999999999999999999999999987643
Q ss_pred C----CCccccCCCCCCccccc-----CCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCC
Q 011184 208 D----GKSYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 278 (491)
Q Consensus 208 ~----~~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (491)
. .....+|+.|+|||++. +..++.++||||||+++|+|++|..|+........... +.........+
T Consensus 181 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~ 256 (326)
T 2x7f_A 181 RTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL----IPRNPAPRLKS 256 (326)
T ss_dssp ----------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH----HHHSCCCCCSC
T ss_pred cCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHH----hhcCccccCCc
Confidence 3 23446899999999987 45689999999999999999999988865432211111 11111111223
Q ss_pred chhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 279 DDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 279 ~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
..++..+.+|+.+||..||.+|||+.++++
T Consensus 257 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 257 KKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp SCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 445679999999999999999999999987
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-42 Score=327.73 Aligned_cols=244 Identities=19% Similarity=0.250 Sum_probs=197.2
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeec----CCeeEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCE----GDERLL 130 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~----~~~~~l 130 (491)
.+.+...||+|+||+||+|.. .++..||+|++...... ..+.+.+|+.+++.++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 356777889999999999995 46889999998654322 24568899999999999999999998865 356899
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccccceeeC-CCCCeEEccCCCcccCCC
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRD 208 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~ 208 (491)
||||+++++|.+++.. ...+++..++.++.||+.||.|||+.+ +++||||||+|||++ .++.+||+|||++.....
T Consensus 107 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~ 184 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EEEecCCCCHHHHHHH--ccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccc
Confidence 9999999999999964 356899999999999999999999985 499999999999997 889999999999876544
Q ss_pred C--CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhh-HhhhccccccccccccCCCCchhHHHH
Q 011184 209 G--KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLEGQFTDDDGTEL 285 (491)
Q Consensus 209 ~--~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (491)
. ....||+.|+|||++. +.++.++||||||+++|+|++|+.||...... ........... ...++...++++
T Consensus 185 ~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l 259 (290)
T 1t4h_A 185 SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK----PASFDKVAIPEV 259 (290)
T ss_dssp TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC----CGGGGGCCCHHH
T ss_pred cccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCC----ccccCCCCCHHH
Confidence 3 2446899999999887 46899999999999999999999988653221 11111111111 111233345689
Q ss_pred HHHHHHhccCCCCCCCChhHHHH
Q 011184 286 VRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.+++.+||+.||.+|||+.++++
T Consensus 260 ~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 260 KEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHccCChhhCCCHHHHhh
Confidence 99999999999999999999987
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-43 Score=347.98 Aligned_cols=248 Identities=14% Similarity=0.076 Sum_probs=182.7
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCC---hhHHHHHHHHHhcc--CCCCcceEE-------eEeec
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQL--RNNRLTNLL-------GCCCE 124 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l--~H~niv~~~-------~~~~~ 124 (491)
.+.+++.||+|+||+||+|.. .+|+.||||++....... .+.+.+|+.+++.| +||||++++ +++..
T Consensus 63 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~ 142 (371)
T 3q60_A 63 KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAV 142 (371)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEE
T ss_pred eeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheec
Confidence 367788899999999999995 468999999998754322 34577886555555 699988755 44433
Q ss_pred C-----------------CeeEEEEecCCCCCHHHHhcccCCCCCCHHHH------HHHHHHHHHHHHHHHhCCCccccc
Q 011184 125 G-----------------DERLLVAEYMPNETLAKHLFHWETHPMKWAMR------LRVVLHLAQALEYCTSKGRALYHD 181 (491)
Q Consensus 125 ~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~------~~i~~qi~~~L~~LH~~~~iiH~D 181 (491)
. ...+|||||++ ++|.+++... ...+++..+ ..++.||+.||.|||+++ |+|||
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~-ivHrD 219 (371)
T 3q60_A 143 QSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL-DFVYVFRGDEGILALHILTAQLIRLAANLQSKG-LVHGH 219 (371)
T ss_dssp TTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH-HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT-EEETT
T ss_pred CCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh-ccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC-CccCc
Confidence 2 33799999998 8999999753 223455555 677899999999999999 99999
Q ss_pred ccccceeeCCCCCeEEccCCCcccCCCCC-ccccCCCCCCcccccC--CCCCCCccchhHHHHHHHHHhCCCCCCCchhh
Q 011184 182 LNAYRILFDEDGNPRLSTFGLMKNSRDGK-SYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALD 258 (491)
Q Consensus 182 lkp~Nill~~~~~~kl~Dfgla~~~~~~~-~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~ 258 (491)
|||+|||++.++.+||+|||+++...... ...+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||......
T Consensus 220 ikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~ 299 (371)
T 3q60_A 220 FTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPG 299 (371)
T ss_dssp CSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTT
T ss_pred CCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcc
Confidence 99999999999999999999998766544 5567799999999987 56899999999999999999999988655322
Q ss_pred Hhhhcc---ccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 259 LIRDRN---LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 259 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
...... .............+..++..+.+|+.+||+.||++|||+.++++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 300 IKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp CTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred cccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 111000 01111111111223466789999999999999999999999986
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-42 Score=349.86 Aligned_cols=250 Identities=17% Similarity=0.201 Sum_probs=204.0
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCC-CCcceEEeEeecCCeeEEEEec
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRN-NRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~~~~~~~~~~~~~lv~e~ 134 (491)
..|++++.||+|+||.||+|.. .+++.||||++.... ....+.+|+++++.++| ++|+.+..++...+..+|||||
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~ 84 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL 84 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence 3577888899999999999995 568999999986543 33468899999999976 6677777777888899999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceee---CCCCCeEEccCCCcccCCCC--
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill---~~~~~~kl~Dfgla~~~~~~-- 209 (491)
+ +++|.+++.. ....+++..++.|+.||+.||.|||+++ ||||||||+|||| +.++.+||+|||+++.....
T Consensus 85 ~-g~sL~~ll~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~g-IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (483)
T 3sv0_A 85 L-GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKS-FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTST 161 (483)
T ss_dssp C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred C-CCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcc
Confidence 9 8999999964 3467999999999999999999999999 9999999999999 68899999999999764432
Q ss_pred ---------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhh-------Hhhhccccccccccc
Q 011184 210 ---------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-------LIRDRNLQMLTDSCL 273 (491)
Q Consensus 210 ---------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~-------~~~~~~~~~~~~~~~ 273 (491)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+..........
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~--- 238 (483)
T 3sv0_A 162 HQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIE--- 238 (483)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHH---
T ss_pred ccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHH---
Confidence 1456899999999999999999999999999999999999998653211 111111111100
Q ss_pred cCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 274 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 274 ~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
.++..++.++.+|+..||+.||.+||++.+|++.|+.+...
T Consensus 239 --~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 239 --ALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp --HHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred --HHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 11124457899999999999999999999999999887553
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=336.93 Aligned_cols=252 Identities=18% Similarity=0.206 Sum_probs=189.0
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccC-CCCcceEEeEee--------cCCe
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNRLTNLLGCCC--------EGDE 127 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~--------~~~~ 127 (491)
.+++++.||+|+||.||++.. .+++.||||++........+.+.+|+.++.++. ||||+++++++. ....
T Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~ 108 (337)
T 3ll6_A 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAE 108 (337)
T ss_dssp EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEE
T ss_pred eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCce
Confidence 567888899999999999995 468999999986554334567899999999996 999999999984 3345
Q ss_pred eEEEEecCCCCCHHHHhccc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccccceeeCCCCCeEEccCCCccc
Q 011184 128 RLLVAEYMPNETLAKHLFHW-ETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMKN 205 (491)
Q Consensus 128 ~~lv~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~-~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 205 (491)
.++||||+. |+|.+++... ...++++..++.++.||+.||.|||+.+ +|+||||||+|||++.++.+||+|||++..
T Consensus 109 ~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 187 (337)
T 3ll6_A 109 FLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATT 187 (337)
T ss_dssp EEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBC
T ss_pred EEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCcccee
Confidence 899999996 7999888642 3457999999999999999999999975 399999999999999999999999999876
Q ss_pred CCCCC----------------ccccCCCCCCcccc---cCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccc
Q 011184 206 SRDGK----------------SYSTNLAFTPPEYL---RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 266 (491)
Q Consensus 206 ~~~~~----------------~~~~t~~y~aPE~~---~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~ 266 (491)
..... ...+|+.|+|||++ .+..++.++||||||+++|+|++|+.||.......+....
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-- 265 (337)
T 3ll6_A 188 ISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGK-- 265 (337)
T ss_dssp CSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------------
T ss_pred ccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhcCc--
Confidence 54321 33478999999998 4566889999999999999999999988654322211111
Q ss_pred ccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccCC
Q 011184 267 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 318 (491)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~ 318 (491)
.........+..+.+|+.+||+.||.+|||+.++++.|+.+.....
T Consensus 266 ------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~ 311 (337)
T 3ll6_A 266 ------YSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN 311 (337)
T ss_dssp ------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred ------ccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence 1111123344568999999999999999999999999998876543
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-42 Score=341.10 Aligned_cols=246 Identities=20% Similarity=0.246 Sum_probs=194.8
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeec-----------
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE----------- 124 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~----------- 124 (491)
..|++++.||+|+||+||+|.. .+|+.||||++.... ....+|+++++.++||||+++++++..
T Consensus 7 ~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 82 (383)
T 3eb0_A 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQP 82 (383)
T ss_dssp TTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC----------
T ss_pred ceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccccccc
Confidence 3567788889999999999995 579999999986433 233479999999999999999999844
Q ss_pred ---------------------------CCeeEEEEecCCCCCHHHHhcc--cCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 011184 125 ---------------------------GDERLLVAEYMPNETLAKHLFH--WETHPMKWAMRLRVVLHLAQALEYCTSKG 175 (491)
Q Consensus 125 ---------------------------~~~~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ 175 (491)
....++||||++ ++|.+.+.. .....+++..+..++.||+.||.|||+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g 161 (383)
T 3eb0_A 83 PDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLG 161 (383)
T ss_dssp ---------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred ccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCc
Confidence 334889999998 688777653 23567999999999999999999999999
Q ss_pred CcccccccccceeeC-CCCCeEEccCCCcccCCC---CCccccCCCCCCcccccCCC-CCCCccchhHHHHHHHHHhCCC
Q 011184 176 RALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRD---GKSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKH 250 (491)
Q Consensus 176 ~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~---~~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~ 250 (491)
|+||||||+|||++ .++.+||+|||+++.... .....+|+.|+|||++.+.. ++.++|||||||++|+|++|+.
T Consensus 162 -i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~ 240 (383)
T 3eb0_A 162 -ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKP 240 (383)
T ss_dssp -EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred -CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCC
Confidence 99999999999997 688999999999986433 23456789999999988754 8999999999999999999999
Q ss_pred CCCCchhhHhhhccccc-----------------------cccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHH
Q 011184 251 IPPSHALDLIRDRNLQM-----------------------LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 307 (491)
Q Consensus 251 ~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il 307 (491)
||.+............. .........++...+.++.+|+.+||+.||.+|||+.+++
T Consensus 241 pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 320 (383)
T 3eb0_A 241 LFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAM 320 (383)
T ss_dssp SSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred CCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 98765332211111100 0000111113445678899999999999999999999999
Q ss_pred H
Q 011184 308 T 308 (491)
Q Consensus 308 ~ 308 (491)
+
T Consensus 321 ~ 321 (383)
T 3eb0_A 321 A 321 (383)
T ss_dssp T
T ss_pred c
Confidence 6
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-42 Score=337.23 Aligned_cols=252 Identities=16% Similarity=0.218 Sum_probs=200.5
Q ss_pred cccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhc--cCCCCcceEEeEeecCC----eeEEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQ--LRNNRLTNLLGCCCEGD----ERLLV 131 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~~~~~~~~~~----~~~lv 131 (491)
.+.+++.||+|+||+||+|.. +|+.||||++... ....+.+|++++.. ++||||+++++++...+ ..++|
T Consensus 43 ~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv 118 (342)
T 1b6c_B 43 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 118 (342)
T ss_dssp HCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEE
T ss_pred cEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEE
Confidence 356677779999999999998 5899999999643 35678889999987 78999999999998876 78999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCcccccccccceeeCCCCCeEEccCCCc
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT--------SKGRALYHDLNAYRILFDEDGNPRLSTFGLM 203 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH--------~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 203 (491)
|||+++|+|.+++.. ..+++..++.++.|++.||.||| +.+ |+||||||+|||++.++.+||+|||++
T Consensus 119 ~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~~ 194 (342)
T 1b6c_B 119 SDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLA 194 (342)
T ss_dssp ECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-EECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred EeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC-eeeCCCCHHHEEECCCCCEEEEECCCc
Confidence 999999999999953 46899999999999999999999 787 999999999999999999999999998
Q ss_pred ccCCCC--------CccccCCCCCCcccccCCC------CCCCccchhHHHHHHHHHhC----------CCCCCCch---
Q 011184 204 KNSRDG--------KSYSTNLAFTPPEYLRTGR------VTPESVIYSFGTLLLDLLSG----------KHIPPSHA--- 256 (491)
Q Consensus 204 ~~~~~~--------~~~~~t~~y~aPE~~~~~~------~~~~~Dv~slG~vl~elltg----------~~~~~~~~--- 256 (491)
...... ....||+.|+|||++.+.. ++.++||||||+++|+|++| ..|+....
T Consensus 195 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 274 (342)
T 1b6c_B 195 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 274 (342)
T ss_dssp EEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCc
Confidence 754332 2346889999999998653 33689999999999999999 55554321
Q ss_pred --hhHhhhccccccccccccC-CCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccC
Q 011184 257 --LDLIRDRNLQMLTDSCLEG-QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 257 --~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
...+..........+.... ......+..+.+|+.+||+.||.+|||+.++++.|+.+....
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 275 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 1111111111111111110 012356778999999999999999999999999999887653
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=330.30 Aligned_cols=250 Identities=20% Similarity=0.247 Sum_probs=201.2
Q ss_pred ccccccccCCCCCccEEEEEEE--CCCCEEEEEEeCCCCC--CChhHHHHHHHHHhcc---CCCCcceEEeEee-----c
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL--ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQL---RNNRLTNLLGCCC-----E 124 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~H~niv~~~~~~~-----~ 124 (491)
..|++++.||+|+||+||++.. .+|+.||||++..... .....+.+|+.+++.+ +||||+++++++. .
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~ 90 (326)
T 1blx_A 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 90 (326)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred hceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCC
Confidence 3577888889999999999996 4588999999864322 2244677888888877 8999999999987 4
Q ss_pred CCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcc
Q 011184 125 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 204 (491)
Q Consensus 125 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 204 (491)
....++||||++ |+|.+++.......+++..+..++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++.
T Consensus 91 ~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g-i~H~dlkp~Nili~~~~~~kl~Dfg~~~ 168 (326)
T 1blx_A 91 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLAR 168 (326)
T ss_dssp EEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred CceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCHHHeEEcCCCCEEEecCcccc
Confidence 567899999998 69999997655556999999999999999999999999 9999999999999999999999999987
Q ss_pred cCCCC---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccc------------
Q 011184 205 NSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT------------ 269 (491)
Q Consensus 205 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~------------ 269 (491)
..... ....+|+.|+|||++.+..++.++||||||+++|+|++|+.||.................
T Consensus 169 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 248 (326)
T 1blx_A 169 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 248 (326)
T ss_dssp CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCS
T ss_pred cccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccc
Confidence 65432 345678999999999988999999999999999999999998876433221111100000
Q ss_pred ---------cccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 270 ---------DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 270 ---------~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.......+...++..+.+|+.+||+.||.+|||+.++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp SCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000011233456789999999999999999999999996
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-42 Score=330.02 Aligned_cols=252 Identities=20% Similarity=0.268 Sum_probs=197.0
Q ss_pred ccccccccCCCCCccEEEEEEEC--CCC--EEEEEEeCCCCCC---ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE--NQR--RIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 129 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~ 129 (491)
..+++++.||+|+||+||+|.+. ++. .||||+++..... ..+.+.+|++++++++||||+++++++..+. .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 45788889999999999999853 233 6899998754322 2467889999999999999999999998755 89
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 209 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 209 (491)
+||||+++++|.+++... ...+++..+..++.||+.||.|||+++ ++||||||+||+++.++.+||+|||++......
T Consensus 97 ~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 174 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 174 (291)
T ss_dssp EEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred eeEecccCCCHHHHHHhc-cCCcCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEEcCCCCEEEcccccccccccc
Confidence 999999999999999642 356899999999999999999999999 999999999999999999999999998765432
Q ss_pred C-------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchh
Q 011184 210 K-------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 281 (491)
Q Consensus 210 ~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (491)
. ...+|..|+|||++.+..++.++||||||+++|+|++ |..|+............... ......+..+
T Consensus 175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~ 250 (291)
T 1u46_A 175 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE----GERLPRPEDC 250 (291)
T ss_dssp CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTS----CCCCCCCTTC
T ss_pred ccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHcc----CCCCCCCcCc
Confidence 2 2345678999999988889999999999999999999 88888655433222211111 1112234456
Q ss_pred HHHHHHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 282 GTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 282 ~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
+..+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 251 ~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 251 PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 7899999999999999999999999999987764
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-42 Score=338.19 Aligned_cols=250 Identities=17% Similarity=0.186 Sum_probs=202.5
Q ss_pred ccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCC---h--------------hHHHHHHHHHhccCCCCcceEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD---P--------------RQFLEEARSVGQLRNNRLTNLL 119 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~--------------~~~~~E~~~l~~l~H~niv~~~ 119 (491)
..|++++.||+|+||.||+|.. +|+.||||++....... . +.+.+|+.++++++||||++++
T Consensus 31 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 109 (348)
T 2pml_X 31 NDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE 109 (348)
T ss_dssp TTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred CceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence 4678888899999999999999 89999999986432111 1 7899999999999999999999
Q ss_pred eEeecCCeeEEEEecCCCCCHHHH------hcccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccccceeeCCC
Q 011184 120 GCCCEGDERLLVAEYMPNETLAKH------LFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDED 192 (491)
Q Consensus 120 ~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~iiH~Dlkp~Nill~~~ 192 (491)
+++...+..++||||+++++|.++ +.......+++..++.++.||+.||.|||+ .+ ++||||||+||+++.+
T Consensus 110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dl~p~Nil~~~~ 188 (348)
T 2pml_X 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN-ICHRDVKPSNILMDKN 188 (348)
T ss_dssp EEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC-EECCCCCGGGEEECTT
T ss_pred EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC-EeecCCChHhEEEcCC
Confidence 999999999999999999999998 654335789999999999999999999999 88 9999999999999999
Q ss_pred CCeEEccCCCcccCCCC--CccccCCCCCCcccccCC-CCCC-CccchhHHHHHHHHHhCCCCCCCchh-hHhhhccccc
Q 011184 193 GNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRTG-RVTP-ESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNLQM 267 (491)
Q Consensus 193 ~~~kl~Dfgla~~~~~~--~~~~~t~~y~aPE~~~~~-~~~~-~~Dv~slG~vl~elltg~~~~~~~~~-~~~~~~~~~~ 267 (491)
+.+||+|||++...... ....+|+.|+|||++.+. .++. ++||||||+++|+|++|..||..... ..........
T Consensus 189 ~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~ 268 (348)
T 2pml_X 189 GRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTK 268 (348)
T ss_dssp SCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSC
T ss_pred CcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhcc
Confidence 99999999998764332 345688999999999877 5666 99999999999999999998865432 1111111111
Q ss_pred ccc-ccc------------cCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 268 LTD-SCL------------EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 268 ~~~-~~~------------~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
... +.. .......++..+.+|+.+||+.||.+|||+.++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 269 NIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp CCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000 000 00011456789999999999999999999999988
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-42 Score=328.34 Aligned_cols=247 Identities=19% Similarity=0.226 Sum_probs=186.5
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
..+++++.||+|+||+||++.. .+|+.||||+++...... .+.+.++...++.++||||+++++++..++..++|||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e 86 (290)
T 3fme_A 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 86 (290)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEE
T ss_pred HhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEe
Confidence 4678888999999999999995 568999999997543221 2234455556888899999999999999999999999
Q ss_pred cCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccccceeeCCCCCeEEccCCCcccCCCC-
Q 011184 134 YMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 209 (491)
Q Consensus 134 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 209 (491)
|++ |+|.+++... ....+++..++.++.||+.||.|||++ + ++||||||+||+++.++.+||+|||++......
T Consensus 87 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 164 (290)
T 3fme_A 87 LMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV 164 (290)
T ss_dssp CCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC-CCCCCCSGGGCEECTTCCEEBCCC----------
T ss_pred hhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeecCCcccccccc
Confidence 997 6887776531 346799999999999999999999998 8 999999999999999999999999998765432
Q ss_pred --CccccCCCCCCcccc----cCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHH
Q 011184 210 --KSYSTNLAFTPPEYL----RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 283 (491)
Q Consensus 210 --~~~~~t~~y~aPE~~----~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (491)
....+|+.|+|||++ .+..++.++||||||+++|+|++|+.|+.......... ................+.
T Consensus 165 ~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 241 (290)
T 3fme_A 165 AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQL---KQVVEEPSPQLPADKFSA 241 (290)
T ss_dssp -----CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHH---HHHHHSCCCCCCTTTSCH
T ss_pred cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHH---HHHhccCCCCcccccCCH
Confidence 234689999999996 45568899999999999999999999886422111100 001111111122335667
Q ss_pred HHHHHHHHhccCCCCCCCChhHHHH
Q 011184 284 ELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 284 ~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
++.+++.+||+.||++|||+.++++
T Consensus 242 ~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 242 EFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHhhcChhhCcCHHHHHh
Confidence 8999999999999999999999987
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-42 Score=333.82 Aligned_cols=241 Identities=16% Similarity=0.200 Sum_probs=193.5
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC--------CChhHHHHHHHHHhccCCCCcceEEeEeecCCee
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--------PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 128 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~ 128 (491)
.|.+++.||+|+||.||+|.. .+++.||||++..... .....+.+|+++++.++||||+++++++..++ .
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~ 89 (322)
T 2ycf_A 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-Y 89 (322)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-E
T ss_pred ceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-e
Confidence 467788889999999999995 4588999999965321 12345889999999999999999999987655 8
Q ss_pred EEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCC---eEEccCCCccc
Q 011184 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN---PRLSTFGLMKN 205 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~---~kl~Dfgla~~ 205 (491)
++||||+++++|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++. +||+|||++..
T Consensus 90 ~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 166 (322)
T 2ycf_A 90 YIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166 (322)
T ss_dssp EEEEECCTTEETHHHHS--TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSSSCCEEECCCTTCEE
T ss_pred EEEEecCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEecCCCCCeEEEccCcccee
Confidence 99999999999999986 3467999999999999999999999999 999999999999987654 99999999987
Q ss_pred CCCCC---ccccCCCCCCccccc---CCCCCCCccchhHHHHHHHHHhCCCCCCCchhh-----Hhhhcccccccccccc
Q 011184 206 SRDGK---SYSTNLAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-----LIRDRNLQMLTDSCLE 274 (491)
Q Consensus 206 ~~~~~---~~~~t~~y~aPE~~~---~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 274 (491)
..... ...||+.|+|||++. ...++.++||||||+++|+|++|..||...... .+........
T Consensus 167 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~------ 240 (322)
T 2ycf_A 167 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI------ 240 (322)
T ss_dssp CCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCC------
T ss_pred cccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccC------
Confidence 65432 345899999999974 456889999999999999999999988643211 1111111000
Q ss_pred CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 275 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 275 ~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
...+...+..+.+|+.+||+.||.+|||+.++++
T Consensus 241 ~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 241 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred chhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 0011235678999999999999999999999986
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-41 Score=325.18 Aligned_cols=250 Identities=17% Similarity=0.154 Sum_probs=204.1
Q ss_pred cCCccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCC---------ChhHHHHHHHHHhccC-CCCcceEEeEe
Q 011184 54 SGFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP---------DPRQFLEEARSVGQLR-NNRLTNLLGCC 122 (491)
Q Consensus 54 ~~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---------~~~~~~~E~~~l~~l~-H~niv~~~~~~ 122 (491)
.-+..+++++.||+|+||.||+|... +|+.||||++...... ..+.+.+|+.+++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 34567888899999999999999964 6899999999754321 1245789999999995 99999999999
Q ss_pred ecCCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCC
Q 011184 123 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 202 (491)
Q Consensus 123 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 202 (491)
..++..++||||+++++|.+++.. ...+++..+..++.||+.||.|||+++ ++||||||+||+++.++.+||+|||+
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLN-IVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTT
T ss_pred ccCCeEEEEEeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEEcCCCcEEEecccc
Confidence 999999999999999999999974 357899999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCC---CccccCCCCCCccccc------CCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccc
Q 011184 203 MKNSRDG---KSYSTNLAFTPPEYLR------TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 273 (491)
Q Consensus 203 a~~~~~~---~~~~~t~~y~aPE~~~------~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (491)
+...... ....+++.|+|||++. ...++.++||||||+++|+|++|..|+.................. .
T Consensus 171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~ 248 (298)
T 1phk_A 171 SCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ--F 248 (298)
T ss_dssp CEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--C
T ss_pred hhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcc--c
Confidence 8765433 3446789999999985 456889999999999999999999988654433222111111110 1
Q ss_pred cCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 274 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 274 ~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
........+..+.+++.+||+.||.+|||+.++++
T Consensus 249 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 249 GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred CcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 11122356788999999999999999999999987
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-42 Score=339.95 Aligned_cols=246 Identities=19% Similarity=0.256 Sum_probs=196.9
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecC-----CeeEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG-----DERLL 130 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~-----~~~~l 130 (491)
.|++++.||+|+||.||++.. .+++.||||++...... ....+.+|++++.+++||||+++++++... ...++
T Consensus 28 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~i 107 (364)
T 3qyz_A 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 107 (364)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred cEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEE
Confidence 577888899999999999995 46889999999753322 235788999999999999999999998764 36899
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 209 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 209 (491)
||||+. ++|.+++. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 108 v~e~~~-~~L~~~l~---~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 182 (364)
T 3qyz_A 108 VQDLME-TDLYKLLK---TQHLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182 (364)
T ss_dssp EEECCS-EEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred EEcccC-cCHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCChHhEEECCCCCEEEEeCcceEecCCCC
Confidence 999997 69999885 356999999999999999999999999 999999999999999999999999998765422
Q ss_pred ------CccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccc-----------
Q 011184 210 ------KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS----------- 271 (491)
Q Consensus 210 ------~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~----------- 271 (491)
....||+.|+|||++.+. .++.++|||||||++|+|++|+.||...............+..+
T Consensus 183 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 262 (364)
T 3qyz_A 183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262 (364)
T ss_dssp CBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCH
T ss_pred CccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhh
Confidence 334689999999987654 48999999999999999999999887643222111110000000
Q ss_pred --------------cccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 272 --------------CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 272 --------------~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
..........+.++.+|+.+||+.||.+|||+.++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000112345678999999999999999999999997
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=338.64 Aligned_cols=245 Identities=20% Similarity=0.245 Sum_probs=191.8
Q ss_pred cccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCC------eeEEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD------ERLLV 131 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~------~~~lv 131 (491)
.|.+++.||+|+||+||+|....+..||+|++.... ....+|+++++.++||||+++++++...+ ..++|
T Consensus 41 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv 116 (394)
T 4e7w_A 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV 116 (394)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEE
T ss_pred eEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEE
Confidence 577888899999999999998776779999885432 22347999999999999999999986543 37899
Q ss_pred EecCCCCCHHHHhcc--cCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeC-CCCCeEEccCCCcccCCC
Q 011184 132 AEYMPNETLAKHLFH--WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRD 208 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~ 208 (491)
|||++++ +...+.. .....+++..+..++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||+++....
T Consensus 117 ~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~ 194 (394)
T 4e7w_A 117 LEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG-ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA 194 (394)
T ss_dssp EECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred eeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEcCCCCcEEEeeCCCcccccC
Confidence 9999854 4443321 13467999999999999999999999999 99999999999999 899999999999976533
Q ss_pred ---CCccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccc------------------
Q 011184 209 ---GKSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ------------------ 266 (491)
Q Consensus 209 ---~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~------------------ 266 (491)
.....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+............
T Consensus 195 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~ 274 (394)
T 4e7w_A 195 GEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYM 274 (394)
T ss_dssp TCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGS
T ss_pred CCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhh
Confidence 2355789999999998765 489999999999999999999999876532211111000
Q ss_pred -----ccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 267 -----MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 267 -----~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
..........++...++++.+|+.+||+.||.+|||+.++++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 275 EHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp SSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 000000011123346679999999999999999999999997
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-42 Score=336.62 Aligned_cols=257 Identities=15% Similarity=0.213 Sum_probs=195.6
Q ss_pred HHHHHHHhcCCccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCC-----------hhHHHHHHHHHhccCCCC
Q 011184 46 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD-----------PRQFLEEARSVGQLRNNR 114 (491)
Q Consensus 46 ~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~H~n 114 (491)
..++....+.| .+++.||+|+||.||+|...+|+.||||++....... .+.+.+|+.++++++|||
T Consensus 14 ~~~~~~~~~~y---~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 90 (362)
T 3pg1_A 14 IAELHAMQSPY---TVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPN 90 (362)
T ss_dssp HHHHHHTTCSC---EEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTT
T ss_pred HHHHHHhccce---EEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcC
Confidence 44555555554 5666779999999999998789999999996533221 267899999999999999
Q ss_pred cceEEeEeec-----CCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceee
Q 011184 115 LTNLLGCCCE-----GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 189 (491)
Q Consensus 115 iv~~~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill 189 (491)
|+++++++.. ....++||||+. |+|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||+
T Consensus 91 iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 91 ILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD-QRIVISPQHIQYFMYHILLGLHVLHEAG-VVHRDLHPGNILL 167 (362)
T ss_dssp BCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEE
T ss_pred ccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCc-CEecCCChHHEEE
Confidence 9999999843 346899999998 688888864 3457999999999999999999999999 9999999999999
Q ss_pred CCCCCeEEccCCCcccCCCC---CccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccc
Q 011184 190 DEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL 265 (491)
Q Consensus 190 ~~~~~~kl~Dfgla~~~~~~---~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~ 265 (491)
+.++.+||+|||++...... ....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.............
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~ 247 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV 247 (362)
T ss_dssp CTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred cCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99999999999998754332 34467889999999887 568999999999999999999999987643222111110
Q ss_pred ccc-----------------------cccc---ccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 266 QML-----------------------TDSC---LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 266 ~~~-----------------------~~~~---~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
... .... .........++.+.+|+.+||+.||.+|||+.++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 248 EVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 000 0000 000112234678999999999999999999999997
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=341.31 Aligned_cols=245 Identities=22% Similarity=0.250 Sum_probs=191.7
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecC------CeeEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG------DERLL 130 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~------~~~~l 130 (491)
.|++++.||+|+||+||+|... +|+.||||++.... ..+.+|+++++.++||||++++++|... ...++
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence 4677888899999999999964 58999999986432 2345799999999999999999998542 23679
Q ss_pred EEecCCCCCHHHHhcc--cCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCC-CCeEEccCCCcccCC
Q 011184 131 VAEYMPNETLAKHLFH--WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSR 207 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~-~~~kl~Dfgla~~~~ 207 (491)
||||++ ++|.+.+.. .....+++..+..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++...
T Consensus 131 v~e~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~ 208 (420)
T 1j1b_A 131 VLDYVP-ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208 (420)
T ss_dssp EEECCC-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred ehhccc-ccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence 999998 567666542 13467999999999999999999999999 9999999999999955 568999999998643
Q ss_pred C---CCccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccc----------------
Q 011184 208 D---GKSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM---------------- 267 (491)
Q Consensus 208 ~---~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~---------------- 267 (491)
. .....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+.............
T Consensus 209 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~ 288 (420)
T 1j1b_A 209 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 288 (420)
T ss_dssp TTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCC
T ss_pred cCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhh
Confidence 3 2345789999999999765 6899999999999999999999998765322111111000
Q ss_pred --c-----ccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 268 --L-----TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 268 --~-----~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
. ....+...++...+.++.+|+.+||+.||.+|||+.++++
T Consensus 289 ~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 289 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp CCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 0 0000000123345689999999999999999999999997
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-41 Score=333.19 Aligned_cols=245 Identities=17% Similarity=0.229 Sum_probs=194.5
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecCCee------
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDER------ 128 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~------ 128 (491)
.|.++..||+|+||+||+|.. .+|+.||||++....... ...+.+|+.+++.++||||+++++++...+..
T Consensus 43 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 122 (371)
T 4exu_A 43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF 122 (371)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCC
T ss_pred cEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeE
Confidence 466778889999999999995 468999999997644322 45788999999999999999999999877654
Q ss_pred EEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC
Q 011184 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 208 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 208 (491)
++||||+. ++|.+++. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 123 ~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 196 (371)
T 4exu_A 123 YLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARHADA 196 (371)
T ss_dssp EEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECSTTCC-----
T ss_pred EEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCcCHHHeEECCCCCEEEEecCccccccc
Confidence 99999997 78988873 45999999999999999999999999 99999999999999999999999999976543
Q ss_pred C-CccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccc-----------------
Q 011184 209 G-KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT----------------- 269 (491)
Q Consensus 209 ~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~----------------- 269 (491)
. ....+|+.|+|||++.+ ..++.++||||||+++|+|++|+.||.+...............
T Consensus 197 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 276 (371)
T 4exu_A 197 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKS 276 (371)
T ss_dssp ---CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHH
T ss_pred CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhh
Confidence 3 34578999999999987 6789999999999999999999999876432211111100000
Q ss_pred --c---cccc---CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 270 --D---SCLE---GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 270 --~---~~~~---~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
. .... .......++.+.+|+.+||+.||.+|||+.++++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 277 YIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp HHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 0 0000 0012245678999999999999999999999997
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-42 Score=331.10 Aligned_cols=247 Identities=17% Similarity=0.217 Sum_probs=191.8
Q ss_pred ccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEee------------
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCC------------ 123 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~------------ 123 (491)
..|++++.||+|+||.||+|... +++.||||++........+.+.+|+.++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 35778889999999999999965 48999999997654444567899999999999999999999873
Q ss_pred --cCCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeC-CCCCeEEccC
Q 011184 124 --EGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTF 200 (491)
Q Consensus 124 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Df 200 (491)
..+..++||||++ |+|.+++. .+++++..++.++.||+.||.|||+++ |+||||||+|||++ .++.+||+||
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~Df 165 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLE---QGPLLEEHARLFMYQLLRGLKYIHSAN-VLHRDLKPANLFINTEDLVLKIGDF 165 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTTEEEECCC
T ss_pred ccccCceeEEeeccC-CCHHHHhh---cCCccHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCeEEEccC
Confidence 3467899999998 69999984 467999999999999999999999999 99999999999997 5679999999
Q ss_pred CCcccCCCC-------CccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccc---
Q 011184 201 GLMKNSRDG-------KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT--- 269 (491)
Q Consensus 201 gla~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~--- 269 (491)
|++...... ....+|..|+|||.+.+ ..++.++||||||+++|+|++|+.||.................
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 245 (320)
T 2i6l_A 166 GLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVH 245 (320)
T ss_dssp TTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCC
T ss_pred ccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCc
Confidence 998865321 23356889999998865 5689999999999999999999998876433221111110000
Q ss_pred ---------------c-----c-cccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 270 ---------------D-----S-CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 270 ---------------~-----~-~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
. + .........++.++.+|+.+||+.||.+|||+.++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 246 EEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 0 0 0000112345678999999999999999999999987
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-41 Score=333.24 Aligned_cols=247 Identities=15% Similarity=0.224 Sum_probs=196.2
Q ss_pred ccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecC-----CeeE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG-----DERL 129 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~-----~~~~ 129 (491)
..+.+++.||+|+||+||+|... +|+.||||++...... ....+.+|+.+++.++||||+++++++... ...+
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 90 (353)
T 2b9h_A 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVY 90 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEE
T ss_pred cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEE
Confidence 35677888899999999999964 6899999999643321 234678999999999999999999988654 6789
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 209 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 209 (491)
+||||+. ++|.+++.. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 91 lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (353)
T 2b9h_A 91 IIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSN-VIHRDLKPSNLLINSNCDLKVCDFGLARIIDES 165 (353)
T ss_dssp EEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEcCCCcEEEEecccccccccc
Confidence 9999997 799998853 57999999999999999999999999 999999999999999999999999998764321
Q ss_pred --------------CccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccc-----
Q 011184 210 --------------KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT----- 269 (491)
Q Consensus 210 --------------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~----- 269 (491)
....||+.|+|||++.+ ..++.++||||||+++|+|++|+.||.+...............
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 245 (353)
T 2b9h_A 166 AADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245 (353)
T ss_dssp --------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCST
T ss_pred cccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchh
Confidence 12357899999998765 6689999999999999999999999876542211100000000
Q ss_pred ---------------cc------cccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 270 ---------------DS------CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 270 ---------------~~------~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.. .........+++++.+|+.+||+.||.+|||+.++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp TTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00 0000012345678999999999999999999999998
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-41 Score=337.68 Aligned_cols=254 Identities=16% Similarity=0.238 Sum_probs=183.9
Q ss_pred ccccc-cCCCCCccEEEEEEEC---CCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEee--cCCeeEEEE
Q 011184 59 ENIVS-EHGEKAPNVVYKGKLE---NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCC--EGDERLLVA 132 (491)
Q Consensus 59 ~~~i~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~--~~~~~~lv~ 132 (491)
+++.+ +||+|+||+||+|... +++.||||++.... ....+.+|+.+|+.++||||+++++++. .+...++||
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 44434 6899999999999964 47899999997543 3457889999999999999999999995 467899999
Q ss_pred ecCCCCCHHHHhccc-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceee----CCCCCeEEccCC
Q 011184 133 EYMPNETLAKHLFHW-------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF----DEDGNPRLSTFG 201 (491)
Q Consensus 133 e~~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill----~~~~~~kl~Dfg 201 (491)
||+. ++|.+++... ....+++..++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||
T Consensus 100 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 177 (405)
T 3rgf_A 100 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMG 177 (405)
T ss_dssp ECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECCSSTTTTCEEECCTT
T ss_pred eCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-EeCCCcCHHHeEEecCCCCCCcEEEEECC
Confidence 9997 6888877521 1235899999999999999999999999 9999999999999 678899999999
Q ss_pred CcccCCCC-------CccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhh---------hcc
Q 011184 202 LMKNSRDG-------KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR---------DRN 264 (491)
Q Consensus 202 la~~~~~~-------~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~---------~~~ 264 (491)
+++..... ....||+.|+|||++.+. .++.++|||||||++|+|++|+.||......... ...
T Consensus 178 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i 257 (405)
T 3rgf_A 178 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI 257 (405)
T ss_dssp CCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHH
T ss_pred CceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHH
Confidence 99765321 245689999999999874 4899999999999999999999988643221000 000
Q ss_pred ccccc------------------------ccccc--------CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcc
Q 011184 265 LQMLT------------------------DSCLE--------GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 312 (491)
Q Consensus 265 ~~~~~------------------------~~~~~--------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~ 312 (491)
...+. ..... .......+..+.+||.+||+.||.+|||++++++ ..
T Consensus 258 ~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~--hp 335 (405)
T 3rgf_A 258 FNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ--DP 335 (405)
T ss_dssp HHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT--SG
T ss_pred HHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc--Ch
Confidence 00000 00000 0000112467899999999999999999999998 45
Q ss_pred ccccCC
Q 011184 313 LQKETE 318 (491)
Q Consensus 313 ~~~~~~ 318 (491)
+.....
T Consensus 336 ~f~~~~ 341 (405)
T 3rgf_A 336 YFLEDP 341 (405)
T ss_dssp GGTSSS
T ss_pred hhccCC
Confidence 554433
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-41 Score=329.98 Aligned_cols=249 Identities=17% Similarity=0.181 Sum_probs=201.8
Q ss_pred ccccccccCCCCCccEEEEEEE--CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCC------cceEEeEeecCCee
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL--ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNR------LTNLLGCCCEGDER 128 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~~~~~~~~~~~~ 128 (491)
..|++++.||+|+||+||++.. .+++.||||+++... ...+.+.+|+.+++.++|+| |+++++++...+..
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~ 92 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI 92 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence 3578888999999999999985 358899999996432 22457889999999997654 99999999999999
Q ss_pred EEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC-----------------
Q 011184 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE----------------- 191 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~----------------- 191 (491)
++||||+ +++|.+++......++++..+..++.||+.||.|||+++ |+||||||+|||++.
T Consensus 93 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK-LTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred EEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 9999999 799999997654457899999999999999999999999 999999999999987
Q ss_pred --CCCeEEccCCCcccCCCC-CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcc---c
Q 011184 192 --DGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN---L 265 (491)
Q Consensus 192 --~~~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~---~ 265 (491)
++.+||+|||++...... ....||+.|+|||++.+..++.++||||||+++|||++|..||............ .
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 250 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERIL 250 (339)
T ss_dssp ESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHH
T ss_pred ccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence 678999999998865433 4557899999999999889999999999999999999999998764322111000 0
Q ss_pred cccc-----------------------------------cccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 266 QMLT-----------------------------------DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 266 ~~~~-----------------------------------~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.... ............++.+.+|+.+||+.||.+|||+.++++
T Consensus 251 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 328 (339)
T 1z57_A 251 GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK 328 (339)
T ss_dssp CSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence 0000 000001123456788999999999999999999999986
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-41 Score=329.09 Aligned_cols=250 Identities=18% Similarity=0.212 Sum_probs=179.9
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC-ChhHHHHHHH-HHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEAR-SVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~-~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
...+++++.||+|+||.||++.. .+|+.||||++...... ....+..|+. +++.++||||+++++++..++..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 35677888899999999999996 46899999999754321 2335566666 677789999999999999999999999
Q ss_pred ecCCCCCHHHHhcc---cCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccccceeeCCCCCeEEccCCCcccCCC
Q 011184 133 EYMPNETLAKHLFH---WETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 208 (491)
Q Consensus 133 e~~~~gsL~~~l~~---~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 208 (491)
||++ ++|.+++.. .....+++..+..++.|++.||.|||+. + ++||||||+|||++.++.+||+|||++.....
T Consensus 101 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 178 (327)
T 3aln_A 101 ELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK-IIHRDIKPSNILLDRSGNIKLCDFGISGQLVD 178 (327)
T ss_dssp CCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS-CCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred eecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC-EeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence 9998 588877752 1246789999999999999999999998 8 99999999999999999999999999876543
Q ss_pred C---CccccCCCCCCcccc----cCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhH-hhhccccccccccccCCCCch
Q 011184 209 G---KSYSTNLAFTPPEYL----RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-IRDRNLQMLTDSCLEGQFTDD 280 (491)
Q Consensus 209 ~---~~~~~t~~y~aPE~~----~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 280 (491)
. ....||+.|+|||++ .+..++.++||||||+++|+|++|+.|+....... ........ ..+.........
T Consensus 179 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 257 (327)
T 3aln_A 179 SIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKG-DPPQLSNSEERE 257 (327)
T ss_dssp ---------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCS-CCCCCCCCSSCC
T ss_pred ccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcC-CCCCCCCccccc
Confidence 2 233688999999998 45668999999999999999999999886532110 00111110 111111122335
Q ss_pred hHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 281 DGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 281 ~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
++..+.+|+.+||+.||.+|||+.++++
T Consensus 258 ~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 258 FSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 6789999999999999999999999986
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-41 Score=325.46 Aligned_cols=243 Identities=19% Similarity=0.267 Sum_probs=191.6
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeec------------
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE------------ 124 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~------------ 124 (491)
.+++++.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+.+++.++||||+++++++..
T Consensus 7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 85 (303)
T 1zy4_A 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVK 85 (303)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------
T ss_pred cchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccc
Confidence 467778889999999999995 468999999985422 234578899999999999999999998865
Q ss_pred -CCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCc
Q 011184 125 -GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLM 203 (491)
Q Consensus 125 -~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla 203 (491)
.+..++||||+++++|.+++.. ....+++..++.++.||+.||.|||+++ ++||||||+|||++.++.+||+|||++
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~ 163 (303)
T 1zy4_A 86 KKSTLFIQMEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQG-IIHRDLKPMNIFIDESRNVKIGDFGLA 163 (303)
T ss_dssp CEEEEEEEEECCCSCBHHHHHHH-SCGGGCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCCCC
T ss_pred cCCceEEEEecCCCCCHHHhhhc-cccccchHHHHHHHHHHHHHHHHHHhCC-eecccCCHHhEEEcCCCCEEEeeCcch
Confidence 3567999999999999999964 3346788999999999999999999999 999999999999999999999999998
Q ss_pred ccCCCC------------------CccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchh-hHhhhc
Q 011184 204 KNSRDG------------------KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDR 263 (491)
Q Consensus 204 ~~~~~~------------------~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~-~~~~~~ 263 (491)
...... ....+|+.|+|||++.+. .++.++||||||+++|+|++ |+..... ......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~ 240 (303)
T 1zy4_A 164 KNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKK 240 (303)
T ss_dssp SCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHH
T ss_pred hhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHh
Confidence 764321 234578999999999864 68999999999999999998 3332211 111111
Q ss_pred cccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 264 NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
. .. ........++...+..+.+++.+||+.||.+|||+.++++
T Consensus 241 ~-~~-~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 241 L-RS-VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp H-HS-TTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred c-cc-cccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 0 00 1111223345566778999999999999999999999998
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-41 Score=330.41 Aligned_cols=255 Identities=20% Similarity=0.225 Sum_probs=187.5
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCe-------e
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE-------R 128 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~-------~ 128 (491)
..+++++.||+|+||+||+|.. .+|+.||||++.... .....+.++++.+..++||||+++++++...+. .
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~ 101 (360)
T 3e3p_A 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYL 101 (360)
T ss_dssp TTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEE
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeE
Confidence 4566778889999999999996 468999999986543 234567788899999999999999999865433 7
Q ss_pred EEEEecCCCCCHHHHhcc--cCCCCCCHHHHHHHHHHHHHHHHHHH--hCCCcccccccccceeeCC-CCCeEEccCCCc
Q 011184 129 LLVAEYMPNETLAKHLFH--WETHPMKWAMRLRVVLHLAQALEYCT--SKGRALYHDLNAYRILFDE-DGNPRLSTFGLM 203 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH--~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla 203 (491)
++||||+++ +|...+.. .....+++..+..++.|++.||.||| +.+ |+||||||+|||++. ++.+||+|||++
T Consensus 102 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~-ivH~Dlkp~NIll~~~~~~~kl~Dfg~a 179 (360)
T 3e3p_A 102 NVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCDFGSA 179 (360)
T ss_dssp EEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC-CBCSCCCGGGEEEETTTTEEEECCCTTC
T ss_pred EEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC-eecCcCCHHHEEEeCCCCcEEEeeCCCc
Confidence 899999985 55544432 13467899999999999999999999 888 999999999999996 899999999999
Q ss_pred ccCCCC---CccccCCCCCCcccccCCC-CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccc----------
Q 011184 204 KNSRDG---KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT---------- 269 (491)
Q Consensus 204 ~~~~~~---~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~---------- 269 (491)
...... ....||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.................
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (360)
T 3e3p_A 180 KKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKL 259 (360)
T ss_dssp BCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred eecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhc
Confidence 865433 3456799999999987654 89999999999999999999998876533221111110000
Q ss_pred ----------------cccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 270 ----------------DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 270 ----------------~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
-...........+.++.+|+.+||+.||.+|||+.++++ .++...
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~--hp~f~~ 320 (360)
T 3e3p_A 260 NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC--HPYFDE 320 (360)
T ss_dssp CTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT--SGGGGG
T ss_pred ccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc--Cccccc
Confidence 000011223346789999999999999999999999997 344443
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-41 Score=331.02 Aligned_cols=246 Identities=14% Similarity=0.156 Sum_probs=173.2
Q ss_pred cccccc-cCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeec----CCeeEEE
Q 011184 58 VENIVS-EHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE----GDERLLV 131 (491)
Q Consensus 58 ~~~~i~-~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~----~~~~~lv 131 (491)
.|.+++ .||+|+||+||+|... +|+.||||++... ..........++.+.||||+++++++.. ....++|
T Consensus 29 ~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 104 (336)
T 3fhr_A 29 DYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLII 104 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred eeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEE
Confidence 456655 4899999999999965 6899999998642 2222333344566799999999999876 4558999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC---CCCeEEccCCCcccCCC
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRD 208 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla~~~~~ 208 (491)
|||++||+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++. ++.+||+|||++.....
T Consensus 105 ~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~-ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~ 183 (336)
T 3fhr_A 105 MECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN-IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ 183 (336)
T ss_dssp EECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--
T ss_pred EeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEEecCCCceEEEeccccceeccc
Confidence 99999999999998655567999999999999999999999999 999999999999975 45599999999976543
Q ss_pred C--CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccc--cccCCCCchhHHH
Q 011184 209 G--KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS--CLEGQFTDDDGTE 284 (491)
Q Consensus 209 ~--~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 284 (491)
. ....+|+.|+|||++.+..++.++||||||+++|+|++|..||...............+... .........++.+
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (336)
T 3fhr_A 184 NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSED 263 (336)
T ss_dssp --------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHH
T ss_pred cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHH
Confidence 2 34567899999999988889999999999999999999999886543322211111111111 1111122456789
Q ss_pred HHHHHHHhccCCCCCCCChhHHHH
Q 011184 285 LVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 285 ~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
+.+|+.+||+.||.+|||+.++++
T Consensus 264 ~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 264 AKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHCCCChhHCcCHHHHhc
Confidence 999999999999999999999998
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-41 Score=357.18 Aligned_cols=251 Identities=20% Similarity=0.264 Sum_probs=204.4
Q ss_pred ccccccccCCCCCccEEEEEEECC----CCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLEN----QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
..+++.+.||+|+||+||+|.... +..||||+++..... ..+.+.+|+.++++++||||+++++++. ++..++|
T Consensus 390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv 468 (656)
T 2j0j_A 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 468 (656)
T ss_dssp GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEE
T ss_pred ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEE
Confidence 456778889999999999999632 457999998754322 2367899999999999999999999985 4668999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC-
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 210 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~- 210 (491)
|||+++|+|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 469 ~E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~ 546 (656)
T 2j0j_A 469 MELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 546 (656)
T ss_dssp EECCTTCBHHHHHHH-TTTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC---
T ss_pred EEcCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchHhEEEeCCCCEEEEecCCCeecCCCcc
Confidence 999999999999964 3446899999999999999999999999 9999999999999999999999999998654432
Q ss_pred ----ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHH
Q 011184 211 ----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 285 (491)
Q Consensus 211 ----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (491)
...+|+.|+|||++.+..++.++||||||+++|||++ |..||.+............. .....+..+++.+
T Consensus 547 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l 621 (656)
T 2j0j_A 547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG-----ERLPMPPNCPPTL 621 (656)
T ss_dssp -------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHT-----CCCCCCTTCCHHH
T ss_pred eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-----CCCCCCccccHHH
Confidence 2345678999999998899999999999999999997 88887654333222111111 1122455667899
Q ss_pred HHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 286 VRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
.+|+.+||+.||.+|||+.++++.|+.+..
T Consensus 622 ~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 622 YSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 999999999999999999999999988754
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-42 Score=342.16 Aligned_cols=249 Identities=14% Similarity=0.185 Sum_probs=198.2
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccC--------CCCcceEEeEee----
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR--------NNRLTNLLGCCC---- 123 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------H~niv~~~~~~~---- 123 (491)
..|++++.||+|+||+||+|.. .+++.||||+++... ...+.+.+|+.+++.++ |+||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 4578888999999999999994 568899999996432 22457889999999995 788999999987
Q ss_pred cCCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccccceeeCCCC---------
Q 011184 124 EGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDG--------- 193 (491)
Q Consensus 124 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~~iiH~Dlkp~Nill~~~~--------- 193 (491)
.....++||||+ +++|.+.+.......+++..++.++.||+.||.|||++ + |+||||||+|||++.++
T Consensus 116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g-ivHrDikp~NIll~~~~~~~~~~~~~ 193 (397)
T 1wak_A 116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR-IIHTDIKPENILLSVNEQYIRRLAAE 193 (397)
T ss_dssp TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECCCCSGGGEEECCCHHHHHHHHHH
T ss_pred CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHeeEeccchhhhhhhhh
Confidence 556799999999 56777776654446799999999999999999999998 8 99999999999999775
Q ss_pred ----------------------------------------CeEEccCCCcccCCCC-CccccCCCCCCcccccCCCCCCC
Q 011184 194 ----------------------------------------NPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVTPE 232 (491)
Q Consensus 194 ----------------------------------------~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~ 232 (491)
.+||+|||++...... ....||+.|+|||++.+..++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 273 (397)
T 1wak_A 194 ATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTP 273 (397)
T ss_dssp HC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTH
T ss_pred hHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcH
Confidence 7999999998765433 34568999999999999899999
Q ss_pred ccchhHHHHHHHHHhCCCCCCCchhhH-------hhh--ccccc------------------------cccc--------
Q 011184 233 SVIYSFGTLLLDLLSGKHIPPSHALDL-------IRD--RNLQM------------------------LTDS-------- 271 (491)
Q Consensus 233 ~Dv~slG~vl~elltg~~~~~~~~~~~-------~~~--~~~~~------------------------~~~~-------- 271 (491)
+|||||||++|+|++|+.||....... ... ..... +...
T Consensus 274 ~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (397)
T 1wak_A 274 ADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEV 353 (397)
T ss_dssp HHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHh
Confidence 999999999999999999886432100 000 00000 0000
Q ss_pred -cccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 272 -CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 272 -~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
......+...+..+.+||.+||+.||.+|||+.++++
T Consensus 354 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 354 LVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred hhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0001234567788999999999999999999999987
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-41 Score=320.71 Aligned_cols=245 Identities=19% Similarity=0.195 Sum_probs=200.6
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCC--CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
.|++++.||+|+||.||++... +++.||||++.... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 23 ~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 102 (287)
T 2wei_A 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGEL 102 (287)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEc
Confidence 5778888999999999999964 68999999986432 23467899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCC---CCeEEccCCCcccCCCC--
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED---GNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~---~~~kl~Dfgla~~~~~~-- 209 (491)
+++++|.+++.. ...+++..++.++.||+.||.|||+++ ++||||||+||+++.+ +.+||+|||++......
T Consensus 103 ~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~ 179 (287)
T 2wei_A 103 YTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179 (287)
T ss_dssp CCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSS
T ss_pred cCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCChhhEEEecCCCcccEEEeccCcceeecCCCc
Confidence 999999998864 356899999999999999999999999 9999999999999754 46999999998765433
Q ss_pred -CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHH
Q 011184 210 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 288 (491)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (491)
....+|+.|+|||.+.+ .++.++||||||+++|+|++|..|+................... .......++.++.++
T Consensus 180 ~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l 256 (287)
T 2wei_A 180 MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAF--DLPQWRTISDDAKDL 256 (287)
T ss_dssp CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC--CSGGGTTSCHHHHHH
T ss_pred cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC--CchhhhhcCHHHHHH
Confidence 23357889999999875 58999999999999999999999887654332222111111000 000113456789999
Q ss_pred HHHhccCCCCCCCChhHHHH
Q 011184 289 ASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~ 308 (491)
+.+||+.||.+|||+.++++
T Consensus 257 i~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 257 IRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp HHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHcccChhhCcCHHHHhc
Confidence 99999999999999999997
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-41 Score=324.27 Aligned_cols=245 Identities=19% Similarity=0.280 Sum_probs=196.4
Q ss_pred ccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccC--CCCcceEEeEeecCCeeEEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLR--NNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~--H~niv~~~~~~~~~~~~~lv~ 132 (491)
..|++++.||+|+||.||++...+++.||||++...... ....+.+|+.++.+++ ||||+++++++..++..++||
T Consensus 28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 107 (313)
T 3cek_A 28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 107 (313)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEE
T ss_pred ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEE
Confidence 457788888999999999999878999999999654322 2457899999999997 599999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC---
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 209 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 209 (491)
| +.+++|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+|||+++ +.+||+|||++......
T Consensus 108 e-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~ 182 (313)
T 3cek_A 108 E-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTS 182 (313)
T ss_dssp C-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEET-TEEEECCCSSSCC-------
T ss_pred e-cCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcccEEEEC-CeEEEeeccccccccCcccc
Confidence 9 557999999974 457899999999999999999999999 999999999999964 88999999998765432
Q ss_pred ---CccccCCCCCCcccccC-----------CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccC
Q 011184 210 ---KSYSTNLAFTPPEYLRT-----------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 275 (491)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~-----------~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (491)
....||+.|+|||.+.+ ..++.++||||||+++|+|++|+.||........ ............
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~~~~~~~~~~~ 259 (313)
T 3cek_A 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---KLHAIIDPNHEI 259 (313)
T ss_dssp -------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH---HHHHHHCTTSCC
T ss_pred ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHH---HHHHHHhccccc
Confidence 23457999999999875 4678899999999999999999998864322111 011111222222
Q ss_pred CCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 276 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 276 ~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
.++...+..+.+++.+||+.||.+|||+.++++.
T Consensus 260 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 260 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 3444556789999999999999999999999973
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-41 Score=328.43 Aligned_cols=245 Identities=17% Similarity=0.220 Sum_probs=194.5
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecCCe------e
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDE------R 128 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~------~ 128 (491)
.|.+...||+|+||.||+|.. .+|+.||||++....... ...+.+|+.+++.++||||+++++++...+. .
T Consensus 25 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 104 (353)
T 3coi_A 25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF 104 (353)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCC
T ss_pred eEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeE
Confidence 466777889999999999995 468999999997643222 3568899999999999999999999987654 4
Q ss_pred EEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC
Q 011184 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 208 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 208 (491)
++||||+. ++|.+++. ..+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||++.....
T Consensus 105 ~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 178 (353)
T 3coi_A 105 YLVMPFMQ-TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARHADA 178 (353)
T ss_dssp EEEEECCS-EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTCCEEECSTTCTTC---
T ss_pred EEEecccc-CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEeECCCCcEEEeecccccCCCC
Confidence 99999997 68887763 35899999999999999999999999 99999999999999999999999999876543
Q ss_pred C-CccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccc--------------------
Q 011184 209 G-KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-------------------- 266 (491)
Q Consensus 209 ~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~-------------------- 266 (491)
. ....+|+.|+|||++.+ ..++.++||||||+++|+|++|+.||.+............
T Consensus 179 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 258 (353)
T 3coi_A 179 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKS 258 (353)
T ss_dssp -----CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHH
T ss_pred CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHH
Confidence 2 34568999999999887 5689999999999999999999998865432211110000
Q ss_pred ---cccc--ccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 267 ---MLTD--SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 267 ---~~~~--~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.+.. ...........++++.+|+.+||+.||.+|||+.++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 259 YIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000 00011233456789999999999999999999999997
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-41 Score=333.52 Aligned_cols=249 Identities=17% Similarity=0.219 Sum_probs=198.4
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccC-----------CCCcceEEeEeec
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-----------NNRLTNLLGCCCE 124 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~~~~~~~~ 124 (491)
..|.+++.||+|+||+||+|.. .+++.||||++.... .....+.+|+.++++++ ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 4578888999999999999995 568999999996432 12456889999999886 8999999999876
Q ss_pred CC----eeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccccceeeC------CCC
Q 011184 125 GD----ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFD------EDG 193 (491)
Q Consensus 125 ~~----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~~iiH~Dlkp~Nill~------~~~ 193 (491)
.+ ..++||||+ +++|.+++.......+++..+..++.||+.||.|||++ + |+||||||+|||++ ..+
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~-ivH~Dikp~NIll~~~~~~~~~~ 175 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPENLI 175 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECSCCSGGGEEEEEEETTTTEE
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC-EEecCCChHHeEEeccCCCcCcc
Confidence 54 789999999 89999999765556799999999999999999999998 8 99999999999994 445
Q ss_pred CeEEccCCCcccCCCC-CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhh------hccc-
Q 011184 194 NPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR------DRNL- 265 (491)
Q Consensus 194 ~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~------~~~~- 265 (491)
.+||+|||++...... ....+|+.|+|||++.+..++.++||||||+++|+|++|..||......... ....
T Consensus 176 ~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 255 (373)
T 1q8y_A 176 QIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 255 (373)
T ss_dssp EEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHH
T ss_pred eEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHH
Confidence 7999999999765433 3457899999999999989999999999999999999999988643211000 0000
Q ss_pred --c------------------------cccc---------ccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 266 --Q------------------------MLTD---------SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 266 --~------------------------~~~~---------~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
. .+.. ......++...+.++.+||.+||+.||.+|||+.++++
T Consensus 256 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 256 LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 333 (373)
T ss_dssp HHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred hcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence 0 0000 00012345677889999999999999999999999998
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-41 Score=325.12 Aligned_cols=238 Identities=21% Similarity=0.309 Sum_probs=193.5
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC------ChhHHHHHHHHHhcc----CCCCcceEEeEeecC
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP------DPRQFLEEARSVGQL----RNNRLTNLLGCCCEG 125 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~H~niv~~~~~~~~~ 125 (491)
..|++++.||+|+||.||+|.. .+++.||||++...... ....+.+|+.++.++ +||||+++++++...
T Consensus 31 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~ 110 (312)
T 2iwi_A 31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQ 110 (312)
T ss_dssp --CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC---
T ss_pred hceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecC
Confidence 3467778889999999999994 56899999999754321 233566899999999 899999999999999
Q ss_pred CeeEEEEec-CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeC-CCCCeEEccCCCc
Q 011184 126 DERLLVAEY-MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLM 203 (491)
Q Consensus 126 ~~~~lv~e~-~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfgla 203 (491)
+..++|||+ +.+++|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+||+++ .++.+||+|||++
T Consensus 111 ~~~~~v~e~~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~dfg~~ 187 (312)
T 2iwi_A 111 EGFMLVLERPLPAQDLFDYITE--KGPLGEGPSRCFFGQVVAAIQHCHSRG-VVHRDIKDENILIDLRRGCAKLIDFGSG 187 (312)
T ss_dssp --CEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT-EECCCCSGGGEEEETTTTEEEECCCSSC
T ss_pred CeEEEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChhhEEEeCCCCeEEEEEcchh
Confidence 999999999 789999999974 356999999999999999999999999 99999999999999 8899999999998
Q ss_pred ccCCCC--CccccCCCCCCcccccCCCCC-CCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCch
Q 011184 204 KNSRDG--KSYSTNLAFTPPEYLRTGRVT-PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 280 (491)
Q Consensus 204 ~~~~~~--~~~~~t~~y~aPE~~~~~~~~-~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (491)
...... ....+|..|+|||++.+..+. .++||||||+++|+|++|+.||..... +... ...++..
T Consensus 188 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~----------~~~~~~~ 255 (312)
T 2iwi_A 188 ALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE--ILEA----------ELHFPAH 255 (312)
T ss_dssp EECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--HHHT----------CCCCCTT
T ss_pred hhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH--Hhhh----------ccCCccc
Confidence 765433 345688999999999876654 589999999999999999988865321 1111 1123445
Q ss_pred hHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 281 DGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 281 ~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
++..+.+++.+||+.||++|||+.++++.
T Consensus 256 ~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 256 VSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 66889999999999999999999999983
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-41 Score=328.21 Aligned_cols=238 Identities=19% Similarity=0.285 Sum_probs=199.9
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC------ChhHHHHHHHHHhccC--CCCcceEEeEeecCC
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP------DPRQFLEEARSVGQLR--NNRLTNLLGCCCEGD 126 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--H~niv~~~~~~~~~~ 126 (491)
...|++++.||+|+||.||+|.. .+++.||||++...... ....+.+|+.++++++ ||||+++++++..++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~ 121 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 121 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC
Confidence 34578888999999999999994 56899999999654322 2356778999999996 599999999999999
Q ss_pred eeEEEEecCCC-CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeC-CCCCeEEccCCCcc
Q 011184 127 ERLLVAEYMPN-ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMK 204 (491)
Q Consensus 127 ~~~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~ 204 (491)
..++|||++.+ ++|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++ .++.+||+|||++.
T Consensus 122 ~~~lv~e~~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~ 198 (320)
T 3a99_A 122 SFVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGA 198 (320)
T ss_dssp EEEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred cEEEEEEcCCCCccHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cEeCCCCHHHEEEeCCCCCEEEeeCcccc
Confidence 99999999976 899999874 457899999999999999999999999 99999999999999 78999999999988
Q ss_pred cCCCC--CccccCCCCCCcccccCCCC-CCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchh
Q 011184 205 NSRDG--KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 281 (491)
Q Consensus 205 ~~~~~--~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (491)
..... ....||+.|+|||++.+..+ +.++||||||+++|+|++|+.||...... . .. ...++..+
T Consensus 199 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~-~~----------~~~~~~~~ 266 (320)
T 3a99_A 199 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-I-RG----------QVFFRQRV 266 (320)
T ss_dssp ECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH-H-HC----------CCCCSSCC
T ss_pred ccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh-h-cc----------cccccccC
Confidence 65443 34568999999999987765 67899999999999999999888654211 1 11 01223455
Q ss_pred HHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 282 GTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 282 ~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
+.++.+|+.+||+.||.+|||+.++++
T Consensus 267 ~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 267 SSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 678999999999999999999999987
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=330.59 Aligned_cols=196 Identities=17% Similarity=0.150 Sum_probs=168.7
Q ss_pred ccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCChhHHHHHHHHHhccC-CC-----CcceEEeEeecCCeeE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NN-----RLTNLLGCCCEGDERL 129 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~-----niv~~~~~~~~~~~~~ 129 (491)
..|++++.||+|+||+||+|... +++.||||+++... .....+.+|+.+++.++ |+ +|+++++++...+..+
T Consensus 54 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 132 (382)
T 2vx3_A 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLC 132 (382)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEE
T ss_pred eeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceE
Confidence 45778888899999999999954 68899999997432 12456778999999885 55 4999999999999999
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh--CCCcccccccccceeeC--CCCCeEEccCCCccc
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS--KGRALYHDLNAYRILFD--EDGNPRLSTFGLMKN 205 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~--~~~iiH~Dlkp~Nill~--~~~~~kl~Dfgla~~ 205 (491)
+||||++ ++|.+++.......+++..+..++.||+.||.|||+ .+ |+||||||+|||++ .++.+||+|||+++.
T Consensus 133 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~-ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~ 210 (382)
T 2vx3_A 133 LVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELS-IIHCDLKPENILLCNPKRSAIKIVDFGSSCQ 210 (382)
T ss_dssp EEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTC-EECCCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCC-EEcCCCCcccEEEecCCCCcEEEEeccCcee
Confidence 9999996 699999976544679999999999999999999994 56 99999999999994 578899999999987
Q ss_pred CCCC-CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCc
Q 011184 206 SRDG-KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH 255 (491)
Q Consensus 206 ~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~ 255 (491)
.... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 211 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 211 LGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp TTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 5433 4567899999999999989999999999999999999999998764
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-40 Score=325.84 Aligned_cols=249 Identities=15% Similarity=0.147 Sum_probs=198.6
Q ss_pred ccccccccCCCCCccEEEEEEEC-CC-CEEEEEEeCCCCCCChhHHHHHHHHHhccCCCC------cceEEeEeecCCee
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE-NQ-RRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNR------LTNLLGCCCEGDER 128 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~~~~~~~~~~~~ 128 (491)
..|++++.||+|+||+||++... ++ +.||||+++... .....+.+|+.+++.++|++ ++.+++++...+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 97 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM 97 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence 35778888999999999999953 34 689999996432 23456888999999997765 89999999999999
Q ss_pred EEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceee-------------------
Q 011184 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF------------------- 189 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill------------------- 189 (491)
++||||+ +++|.+++......++++..+..++.||+.||.|||+++ |+||||||+|||+
T Consensus 98 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~ 175 (355)
T 2eu9_A 98 CIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ-LTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175 (355)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred EEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEecccccccccccccccccc
Confidence 9999999 577777776544467999999999999999999999999 9999999999999
Q ss_pred CCCCCeEEccCCCcccCCC-CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcc---c
Q 011184 190 DEDGNPRLSTFGLMKNSRD-GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN---L 265 (491)
Q Consensus 190 ~~~~~~kl~Dfgla~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~---~ 265 (491)
+.++.+||+|||++..... .....||+.|+|||++.+..++.++||||||+++|||++|..||............ .
T Consensus 176 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 255 (355)
T 2eu9_A 176 VKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKIL 255 (355)
T ss_dssp ESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred cCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc
Confidence 5678999999999986543 34557899999999999889999999999999999999999998754322111000 0
Q ss_pred ccccc----------------------------------c-cccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 266 QMLTD----------------------------------S-CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 266 ~~~~~----------------------------------~-~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
...+. . ..........+.++.+|+.+||+.||.+|||+.++++
T Consensus 256 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 256 GPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp CCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00000 0 0001112345678999999999999999999999986
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=333.86 Aligned_cols=240 Identities=18% Similarity=0.136 Sum_probs=183.7
Q ss_pred cccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEEecCCCCCH
Q 011184 62 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPNETL 140 (491)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e~~~~gsL 140 (491)
.+.||+|+||+||.+...+|+.||||++... ..+.+.+|+.++.++ +||||+++++++..++..++||||+. |+|
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL 95 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL 95 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence 4567999999998776667999999998643 245678999999987 89999999999999999999999996 699
Q ss_pred HHHhcccCCCC-----CCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCC-------------CCeEEccCCC
Q 011184 141 AKHLFHWETHP-----MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-------------GNPRLSTFGL 202 (491)
Q Consensus 141 ~~~l~~~~~~~-----l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~-------------~~~kl~Dfgl 202 (491)
.+++....... .++..++.++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~ 174 (434)
T 2rio_A 96 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK-IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174 (434)
T ss_dssp HHHHHTC------------CCHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTT
T ss_pred HHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCcccccccccCCCceEEEEccccc
Confidence 99997432111 122345789999999999999999 9999999999999754 4799999999
Q ss_pred cccCCCC--------CccccCCCCCCcccccC-------CCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhcccc
Q 011184 203 MKNSRDG--------KSYSTNLAFTPPEYLRT-------GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQ 266 (491)
Q Consensus 203 a~~~~~~--------~~~~~t~~y~aPE~~~~-------~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~ 266 (491)
++..... ....||+.|+|||++.+ ..++.++|||||||++|||++ |..|+......... ...
T Consensus 175 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~--i~~ 252 (434)
T 2rio_A 175 CKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN--IIR 252 (434)
T ss_dssp CEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHH--HHH
T ss_pred ceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHH--Hhc
Confidence 9865432 13468999999999976 568999999999999999999 88777543222110 011
Q ss_pred cccc-ccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 267 MLTD-SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 267 ~~~~-~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.... ..........++.++.+|+.+||+.||.+|||+.++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 253 GIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp TCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1100 11111223467789999999999999999999999986
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-40 Score=331.55 Aligned_cols=242 Identities=16% Similarity=0.117 Sum_probs=186.0
Q ss_pred cccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEEEecCC
Q 011184 58 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
.+++...||+|+||+|+.....+|+.||||++.... ...+.+|+.+|+.+ +||||+++++++...+..++||||+.
T Consensus 25 ~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~ 101 (432)
T 3p23_A 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA 101 (432)
T ss_dssp EEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred EEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence 355667779999999765555678999999996532 34567899999999 79999999999999999999999996
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC-----CCCeEEccCCCcccCCCC--
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-----DGNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~-----~~~~kl~Dfgla~~~~~~-- 209 (491)
|+|.+++... ....++..++.++.||+.||.|||+++ |+||||||+|||++. ...+||+|||+++.....
T Consensus 102 -g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~ 178 (432)
T 3p23_A 102 -ATLQEYVEQK-DFAHLGLEPITLLQQTTSGLAHLHSLN-IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178 (432)
T ss_dssp -EEHHHHHHSS-SCCCCSSCHHHHHHHHHHHHHHHHHTT-CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred -CCHHHHHHhc-CCCccchhHHHHHHHHHHHHHHHHHCc-CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence 6999999753 234455567789999999999999999 999999999999953 335889999998765422
Q ss_pred -----CccccCCCCCCcccccC---CCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCch
Q 011184 210 -----KSYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 280 (491)
Q Consensus 210 -----~~~~~t~~y~aPE~~~~---~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (491)
....||+.|+|||++.+ ..++.++|||||||++|||++ |..||........... ...... ........
T Consensus 179 ~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~-~~~~~~--~~~~~~~~ 255 (432)
T 3p23_A 179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANIL-LGACSL--DCLHPEKH 255 (432)
T ss_dssp -------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHH-TTCCCC--TTSCTTCH
T ss_pred ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHH-hccCCc--cccCcccc
Confidence 23568999999999973 557889999999999999999 7777644322221111 111000 01112345
Q ss_pred hHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 281 DGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 281 ~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.+..+.+||.+||+.||.+|||+.++++
T Consensus 256 ~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 256 EDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp HHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 5677899999999999999999999996
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=345.24 Aligned_cols=250 Identities=17% Similarity=0.192 Sum_probs=196.1
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeec------CCe
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCE------GDE 127 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~------~~~ 127 (491)
+..|++++.||.|+||+||+|.. .+|+.||||++..... ...+.+.+|++++++++||||+++++++.. ++.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 45688889999999999999995 5689999999875432 124568999999999999999999999765 667
Q ss_pred eEEEEecCCCCCHHHHhcccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCC---eEEccCCCc
Q 011184 128 RLLVAEYMPNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN---PRLSTFGLM 203 (491)
Q Consensus 128 ~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~---~kl~Dfgla 203 (491)
.++||||++||+|.+++.... ...+++..++.++.||+.||.|||+.+ |+||||||+||+++.++. +||+|||++
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g-IVHrDLKP~NILl~~~g~~~~vKL~DFG~a 171 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR-IIHRDLKPENIVLQPGPQRLIHKIIDLGYA 171 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT-BCCCCCCSTTEEEECCSSSCEEEECSCCCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEeecCCCceeEEEcccccc
Confidence 899999999999999997532 236889999999999999999999999 999999999999997665 999999999
Q ss_pred ccCCCC---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHh-hh-------------cccc
Q 011184 204 KNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI-RD-------------RNLQ 266 (491)
Q Consensus 204 ~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~-~~-------------~~~~ 266 (491)
...... ....||+.|+|||.+.+..++.++||||||+++|+|++|..||........ .. ....
T Consensus 172 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 251 (676)
T 3qa8_A 172 KELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLT 251 (676)
T ss_dssp CBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCS
T ss_pred cccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhc
Confidence 875443 345689999999999999999999999999999999999998865321110 00 0000
Q ss_pred c---c-ccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHH
Q 011184 267 M---L-TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 306 (491)
Q Consensus 267 ~---~-~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~i 306 (491)
. . ........+...++..+.+++.+||..||.+|||+.++
T Consensus 252 g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 252 GAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp SSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred cccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 0 0 00011223455688999999999999999999999773
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-40 Score=314.03 Aligned_cols=231 Identities=15% Similarity=0.141 Sum_probs=185.0
Q ss_pred cccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCC---hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
.|++++.||+|+||.||+|... +++.||||++....... .+.+.+|+.++.+++||||+++++++..++..|+|||
T Consensus 32 ~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 111 (286)
T 3uqc_A 32 RYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAE 111 (286)
T ss_dssp TEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEE
Confidence 4778888999999999999964 48999999998655433 2678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCCccc
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS 213 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 213 (491)
|++|++|.+++.. + .....+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+++|
T Consensus 112 ~~~g~~L~~~l~~---~-~~~~~~~~i~~ql~~aL~~lH~~g-ivH~Dikp~NIll~~~g~~kl~~~~------------ 174 (286)
T 3uqc_A 112 WIRGGSLQEVADT---S-PSPVGAIRAMQSLAAAADAAHRAG-VALSIDHPSRVRVSIDGDVVLAYPA------------ 174 (286)
T ss_dssp CCCEEEHHHHHTT---C-CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEETTSCEEECSCC------------
T ss_pred ecCCCCHHHHHhc---C-CChHHHHHHHHHHHHHHHHHHHCC-CccCCCCcccEEEcCCCCEEEEecc------------
Confidence 9999999999942 3 355678899999999999999999 9999999999999999999998554
Q ss_pred cCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccccccc-ccccCCCCchhHHHHHHHHHHh
Q 011184 214 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD-SCLEGQFTDDDGTELVRLASRC 292 (491)
Q Consensus 214 ~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~c 292 (491)
|++ .++.++||||||+++|+|++|+.||.................. ..........++.++.+|+.+|
T Consensus 175 ----~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 243 (286)
T 3uqc_A 175 ----TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARS 243 (286)
T ss_dssp ----CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHH
T ss_pred ----ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHH
Confidence 333 3688999999999999999999988754321100000000000 0000112345668899999999
Q ss_pred ccCCCCCCCChhHHHHHhccccccC
Q 011184 293 LQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 293 l~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
|+.||.+| |+.++++.|+.+....
T Consensus 244 l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 244 VQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp HCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred cccCCccC-CHHHHHHHHHHHhccC
Confidence 99999999 9999999999887643
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-40 Score=318.73 Aligned_cols=247 Identities=19% Similarity=0.249 Sum_probs=180.7
Q ss_pred CccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
+..+++++.||+|+||.||++... +|+.||||++....... .+.+..+..+++.++||||+++++++..++..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 456788889999999999999964 68999999997543221 123444556788889999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccccceeeCCCCCeEEccCCCcccCCCC--
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 209 (491)
||+ ++.+..+... ....+++..+..++.||+.||.|||++ + ++||||||+||+++.++.+||+|||++......
T Consensus 104 e~~-~~~~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (318)
T 2dyl_A 104 ELM-GTCAEKLKKR-MQGPIPERILGKMTVAIVKALYYLKEKHG-VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA 180 (318)
T ss_dssp CCC-SEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred ecc-CCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhhCC-EEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc
Confidence 999 5666655542 346799999999999999999999995 8 999999999999999999999999998754332
Q ss_pred -CccccCCCCCCccccc-----CCCCCCCccchhHHHHHHHHHhCCCCCCCchhh-HhhhccccccccccccCCCCchhH
Q 011184 210 -KSYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLEGQFTDDDG 282 (491)
Q Consensus 210 -~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 282 (491)
....+|+.|+|||++. ...++.++||||||+++|+|++|+.||...... ............ .......++
T Consensus 181 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 257 (318)
T 2dyl_A 181 KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPP---LLPGHMGFS 257 (318)
T ss_dssp ------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCC---CCCSSSCCC
T ss_pred ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCC---CCCccCCCC
Confidence 2346889999999985 456889999999999999999999888652211 111111111100 001122456
Q ss_pred HHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 283 TELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 283 ~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.++.+++.+||+.||.+|||+.++++
T Consensus 258 ~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 258 GDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhh
Confidence 78999999999999999999999986
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=310.18 Aligned_cols=226 Identities=15% Similarity=0.145 Sum_probs=180.6
Q ss_pred cccccc-ccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHH-hccCCCCcceEEeEeec----CCeeE
Q 011184 57 AVENIV-SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSV-GQLRNNRLTNLLGCCCE----GDERL 129 (491)
Q Consensus 57 ~~~~~i-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~H~niv~~~~~~~~----~~~~~ 129 (491)
..+.++ +.||+|+||.||++.. .+++.||||+++. ...+.+|+.++ +.++||||+++++++.. ....+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 345566 5689999999999995 5689999999853 35688999998 45589999999999876 67789
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC---CCCeEEccCCCcccC
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNS 206 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla~~~ 206 (491)
+||||++|++|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||++...
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 170 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 170 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEecCCCCCcEEEecccccccc
Confidence 9999999999999998655567999999999999999999999999 999999999999997 788999999998643
Q ss_pred CCCCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCC----chhH
Q 011184 207 RDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT----DDDG 282 (491)
Q Consensus 207 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 282 (491)
. +..++.++||||||+++|+|++|..||...............+.... ..++ ..++
T Consensus 171 ~------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 230 (299)
T 3m2w_A 171 T------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ--YEFPNPEWSEVS 230 (299)
T ss_dssp T------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTC--CSSCHHHHTTSC
T ss_pred c------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhcc--ccCCchhcccCC
Confidence 2 24567899999999999999999998865433222111111111111 1112 3456
Q ss_pred HHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 283 TELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 283 ~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.++.+|+.+||+.||.+|||+.++++
T Consensus 231 ~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 231 EEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHHcccChhhCCCHHHHhc
Confidence 89999999999999999999999997
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-39 Score=319.57 Aligned_cols=237 Identities=16% Similarity=0.125 Sum_probs=178.7
Q ss_pred ccccccCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCC---ChhHHHHHHHHHhccCC-CCcce----------------
Q 011184 59 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRN-NRLTN---------------- 117 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H-~niv~---------------- 117 (491)
+.+.+.||+|+||+||+|. ..+|+.||||++...... ..+.+.+|+.++..++| +|...
T Consensus 80 ~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 159 (413)
T 3dzo_A 80 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKD 159 (413)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEEC
T ss_pred EEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhccc
Confidence 4555678999999999999 456999999999743322 35789999999999987 32211
Q ss_pred -----EEeEeec-----CCeeEEEEecCCCCCHHHHhc-----ccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccc
Q 011184 118 -----LLGCCCE-----GDERLLVAEYMPNETLAKHLF-----HWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL 182 (491)
Q Consensus 118 -----~~~~~~~-----~~~~~lv~e~~~~gsL~~~l~-----~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dl 182 (491)
+..++.. ....+++|+++ +++|.+++. ......+++..++.++.||+.||.|||+++ ||||||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-iiHrDi 237 (413)
T 3dzo_A 160 PQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-LVHTYL 237 (413)
T ss_dssp CC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-EECSCC
T ss_pred CCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCc
Confidence 1111111 12357777776 599999884 112345788899999999999999999999 999999
Q ss_pred cccceeeCCCCCeEEccCCCcccCCCC-CccccCCCCCCcccc----------cCCCCCCCccchhHHHHHHHHHhCCCC
Q 011184 183 NAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYL----------RTGRVTPESVIYSFGTLLLDLLSGKHI 251 (491)
Q Consensus 183 kp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~~t~~y~aPE~~----------~~~~~~~~~Dv~slG~vl~elltg~~~ 251 (491)
||+|||++.++.+||+|||+++..... ....| +.|+|||++ .+..++.++|||||||++|||++|+.|
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~P 316 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP 316 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCC
T ss_pred ccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCC
Confidence 999999999999999999998765433 33456 999999999 545588899999999999999999998
Q ss_pred CCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 252 PPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
|.......... .+.. ....++..+.+||.+||+.||.+|||+.++++
T Consensus 317 f~~~~~~~~~~----~~~~------~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 317 NTDDAALGGSE----WIFR------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp CCTTGGGSCSG----GGGS------SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCcchhhhHH----HHHh------hcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 86543322111 1111 11234578999999999999999999777654
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=316.99 Aligned_cols=240 Identities=13% Similarity=0.080 Sum_probs=185.0
Q ss_pred ccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCC--------CChhHHHHHHHHHhccC---------CCCcceEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAW--------PDPRQFLEEARSVGQLR---------NNRLTNLL 119 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~---------H~niv~~~ 119 (491)
..|++++.||+|+||+||+|+. +|+.||||++..... ...+.+.+|+.+++.++ ||||+++.
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 4567888899999999999998 689999999975432 12367899999999986 77777776
Q ss_pred eEe-----------------ec-------------CCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHH
Q 011184 120 GCC-----------------CE-------------GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALE 169 (491)
Q Consensus 120 ~~~-----------------~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~ 169 (491)
+++ .. .+..+|||||+++|++.+.+. ...+++..+..++.||+.||.
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~---~~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR---TKLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT---TTCCCHHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH---hcCCCHHHHHHHHHHHHHHHH
Confidence 654 22 678999999999997766663 356899999999999999999
Q ss_pred HHH-hCCCcccccccccceeeCCCC--------------------CeEEccCCCcccCCCCCccccCCCCCCcccccCCC
Q 011184 170 YCT-SKGRALYHDLNAYRILFDEDG--------------------NPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGR 228 (491)
Q Consensus 170 ~LH-~~~~iiH~Dlkp~Nill~~~~--------------------~~kl~Dfgla~~~~~~~~~~~t~~y~aPE~~~~~~ 228 (491)
||| +++ |+||||||+|||++.++ .+||+|||+++..... ...||+.|+|||++.+..
T Consensus 176 ~lH~~~~-ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-~~~gt~~y~aPE~~~g~~ 253 (336)
T 2vuw_A 176 VAEASLR-FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-IVVFCDVSMDEDLFTGDG 253 (336)
T ss_dssp HHHHHHC-CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-EEECCCCTTCSGGGCCCS
T ss_pred HHHHhCC-EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-cEEEeecccChhhhcCCC
Confidence 999 898 99999999999999887 8999999999876543 457899999999998666
Q ss_pred CCCCccchhHHHH-HHHHHhCCCCCCCchh-hHhhhccccc-cccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhH
Q 011184 229 VTPESVIYSFGTL-LLDLLSGKHIPPSHAL-DLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 305 (491)
Q Consensus 229 ~~~~~Dv~slG~v-l~elltg~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~ 305 (491)
+.++||||||++ .+++++|..|+....+ .......... ..........+..+++++.+||.+||+.| |+++
T Consensus 254 -~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e 327 (336)
T 2vuw_A 254 -DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATD 327 (336)
T ss_dssp -SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHH
T ss_pred -ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHH
Confidence 889999998777 7778889877643211 0011111101 01111111123467889999999999976 8999
Q ss_pred HH-H
Q 011184 306 LV-T 308 (491)
Q Consensus 306 il-~ 308 (491)
++ +
T Consensus 328 ~l~~ 331 (336)
T 2vuw_A 328 LLCQ 331 (336)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 98 5
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.6e-33 Score=285.64 Aligned_cols=179 Identities=13% Similarity=0.096 Sum_probs=128.2
Q ss_pred cCCCCCccEEEEEE-ECCCCEEEEEEeCCCCCC----------ChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeEEE
Q 011184 64 EHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP----------DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~----------~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~lv 131 (491)
..+.|+.|.+..+. .-.|+.++||++...... +.++|.+|+++|+++ .|+||+++++++.+++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 34566666666554 335888999999654321 124699999999999 799999999999999999999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC--
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 209 (491)
|||++|++|.++|.. .++++.. +|+.||+.||.|+|++| ||||||||+|||++.+|++||+|||+|+.....
T Consensus 321 MEyv~G~~L~d~i~~--~~~l~~~---~I~~QIl~AL~ylH~~G-IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~ 394 (569)
T 4azs_A 321 MEKLPGRLLSDMLAA--GEEIDRE---KILGSLLRSLAALEKQG-FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS 394 (569)
T ss_dssp EECCCSEEHHHHHHT--TCCCCHH---HHHHHHHHHHHHHHHTT-CEESCCCGGGEEECTTSCEEECCCTTEESCC---C
T ss_pred EecCCCCcHHHHHHh--CCCCCHH---HHHHHHHHHHHHHHHCC-ceeccCchHhEEECCCCCEEEeecccCeeCCCCCc
Confidence 999999999999974 4567654 57899999999999999 999999999999999999999999999865443
Q ss_pred --CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCC
Q 011184 210 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 249 (491)
Q Consensus 210 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~ 249 (491)
.+..||+.|||||++.+ .+..++|+||+|++++++.++.
T Consensus 395 ~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~ 435 (569)
T 4azs_A 395 WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPW 435 (569)
T ss_dssp CSHHHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred cccCceechhhccHHHhCC-CCCCcccccccccchhhhcccc
Confidence 24468999999999975 5677899999999988876654
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.7e-28 Score=248.56 Aligned_cols=176 Identities=13% Similarity=0.110 Sum_probs=142.6
Q ss_pred ccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCC--------hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 63 SEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--------PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
+.||+|+||+||++.. .++.+++|+........ .+.+.+|++++++++||||+++..++...+..+|||||
T Consensus 342 ~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~ 420 (540)
T 3en9_A 342 HLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSY 420 (540)
T ss_dssp ------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEEC
T ss_pred CEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEEC
Confidence 4679999999999964 57889999875433222 23478999999999999999666666677778999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-----
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 209 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----- 209 (491)
++|++|.+++.. +..++.|++.||.|||+++ |+||||||+|||++. .+||+|||+++.....
T Consensus 421 ~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~g-IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~ 487 (540)
T 3en9_A 421 INGKLAKDVIED----------NLDIAYKIGEIVGKLHKND-VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAV 487 (540)
T ss_dssp CCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTT-EECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHH
T ss_pred CCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCc-CccCCCCHHHEEECC--eEEEEECccCEECCCcccccc
Confidence 999999999852 5688999999999999999 999999999999998 9999999999887553
Q ss_pred ------CccccCCCCCCcccccC--CCCCCCccchhHHHHHHHHHhCCCCC
Q 011184 210 ------KSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIP 252 (491)
Q Consensus 210 ------~~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~vl~elltg~~~~ 252 (491)
....||+.|||||++.. ..|+..+|+||..+-.++-+.++.++
T Consensus 488 ~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 488 DLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred chhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 24568999999999986 45788899999999888887776443
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-25 Score=210.28 Aligned_cols=154 Identities=16% Similarity=0.088 Sum_probs=120.2
Q ss_pred HHHHhcCCccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCC------------------ChhHHHHHHHHHhcc
Q 011184 49 LKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP------------------DPRQFLEEARSVGQL 110 (491)
Q Consensus 49 ~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------------~~~~~~~E~~~l~~l 110 (491)
+......-..+.+.+.||.|+||.||+|...+|+.||||+++..... ....+.+|+.+++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 33334444455566888999999999999977999999999643321 134588999999999
Q ss_pred CCCCcceEEeEeecCCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeC
Q 011184 111 RNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 190 (491)
Q Consensus 111 ~H~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~ 190 (491)
+ | +++.+++.. +..++||||++|++|.+ +.. .....++.||+.||.|||+.+ |+||||||+|||++
T Consensus 162 ~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~g-iiHrDlkp~NILl~ 227 (282)
T 1zar_A 162 Q--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHRG-IVHGDLSQYNVLVS 227 (282)
T ss_dssp T--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEEE
T ss_pred c--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHCC-CEeCCCCHHHEEEE
Confidence 9 4 555555433 55699999999999988 421 124478999999999999999 99999999999999
Q ss_pred CCCCeEEccCCCcccCCCCCccccCCCCCCcccccC
Q 011184 191 EDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRT 226 (491)
Q Consensus 191 ~~~~~kl~Dfgla~~~~~~~~~~~t~~y~aPE~~~~ 226 (491)
++.+||+|||+++. +..++|||++..
T Consensus 228 -~~~vkl~DFG~a~~---------~~~~~a~e~l~r 253 (282)
T 1zar_A 228 -EEGIWIIDFPQSVE---------VGEEGWREILER 253 (282)
T ss_dssp -TTEEEECCCTTCEE---------TTSTTHHHHHHH
T ss_pred -CCcEEEEECCCCeE---------CCCCCHHHHHHH
Confidence 99999999999864 345788988753
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.86 E-value=4.5e-21 Score=158.18 Aligned_cols=111 Identities=20% Similarity=0.249 Sum_probs=106.8
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 457 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (491)
.+..++.++++|+.+++.|+|++|++.|++||+++|+ ++.+|.++|.+|..+|++++|+.+|++||+++|+++.+|+++
T Consensus 9 nP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l 87 (126)
T 4gco_A 9 NPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRK 87 (126)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHH
Confidence 4577889999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHHHccccccccccc
Q 011184 458 AAALSAMGMENEAQVALKEGTTLEAKKNSTAG 489 (491)
Q Consensus 458 g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~ 489 (491)
|.+|..+|++++|+++|++|++++|++.+++.
T Consensus 88 g~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~ 119 (126)
T 4gco_A 88 AACLVAMREWSKAQRAYEDALQVDPSNEEARE 119 (126)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHH
Confidence 99999999999999999999999999987753
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.9e-21 Score=181.33 Aligned_cols=149 Identities=13% Similarity=0.075 Sum_probs=113.4
Q ss_pred HHHHHHHhcCCccccccccCCCCCccEEEEEEE-CCCCE--EEEEEeCCCCCCC------------------------hh
Q 011184 46 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRR--IAVKRFNRMAWPD------------------------PR 98 (491)
Q Consensus 46 ~~~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~------------------------~~ 98 (491)
...+....+.-..+.+.+.||.|+||.||+|.. .+|+. ||||+++...... ..
T Consensus 36 ~~~l~~~~~~~~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (258)
T 1zth_A 36 LKTLYKLSAKGYITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFI 115 (258)
T ss_dssp HHHHHHHHHTTSEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHH
T ss_pred HHHHHHHHhCCCchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHH
Confidence 334444444445567888899999999999996 67888 9999976432110 12
Q ss_pred HHHHHHHHHhccCCCCc--ceEEeEeecCCeeEEEEecCCC-C----CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHH
Q 011184 99 QFLEEARSVGQLRNNRL--TNLLGCCCEGDERLLVAEYMPN-E----TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYC 171 (491)
Q Consensus 99 ~~~~E~~~l~~l~H~ni--v~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~L 171 (491)
.+.+|+.+|..+.|+++ +.++++ +..+|||||+.+ | +|.+.... .++..+..++.|++.+|.||
T Consensus 116 ~~~~E~~~l~~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~l 186 (258)
T 1zth_A 116 WTEKEFRNLERAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRL 186 (258)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHH
Confidence 57899999999988864 444443 346899999942 3 78776532 23446778999999999999
Q ss_pred H-hCCCcccccccccceeeCCCCCeEEccCCCcccC
Q 011184 172 T-SKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 206 (491)
Q Consensus 172 H-~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 206 (491)
| +.+ |+||||||+|||++. .++|+|||++...
T Consensus 187 H~~~g-ivHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 187 YQEAE-LVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp HHTSC-EECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred HHHCC-EEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9 898 999999999999998 8999999998764
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.82 E-value=7.2e-20 Score=153.89 Aligned_cols=111 Identities=13% Similarity=0.044 Sum_probs=103.6
Q ss_pred HHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------c-----HHHHhhHHHHHHhcCChHHHHHHHHHHHhh-
Q 011184 379 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV------S-----PTVYARRSLCYLMSDMPQDALNDAMQAQII- 446 (491)
Q Consensus 379 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~------~-----~~~~~~~~~~~~~~~~~~~A~~~~~~al~l- 446 (491)
...+..++++|+.+++.|+|++|++.|++||+++|++ + ..+|+|+|.++..+|+|++|+.+|++||++
T Consensus 8 ~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~ 87 (159)
T 2hr2_A 8 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYF 87 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhh
Confidence 4678899999999999999999999999999999982 2 349999999999999999999999999999
Q ss_pred ------CCCchHHH----HHHHHHHHHCCChHHHHHHHHHHHccccccccccc
Q 011184 447 ------SPIWHIAS----YLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 489 (491)
Q Consensus 447 ------~p~~~~a~----~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~ 489 (491)
+|+++++| |++|.++..+|++++|+++|++|++++|.+....+
T Consensus 88 n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~ 140 (159)
T 2hr2_A 88 NRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETP 140 (159)
T ss_dssp HHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCT
T ss_pred hccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHH
Confidence 99999999 99999999999999999999999999999886543
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-18 Score=148.14 Aligned_cols=109 Identities=6% Similarity=-0.100 Sum_probs=104.9
Q ss_pred hhhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHH
Q 011184 376 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 455 (491)
Q Consensus 376 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 455 (491)
.-.+.++..++.+|..+++.|+|++|+..|+++++++|+ ++.+|.++|.+|..+|++++|+..|++|++++|+++.+|+
T Consensus 30 ~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~ 108 (151)
T 3gyz_A 30 AIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY-NVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVF 108 (151)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHH
Confidence 346788999999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCChHHHHHHHHHHHccccccc
Q 011184 456 LQAAALSAMGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 456 ~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 485 (491)
++|.+|..+|++++|+.+|++|++++|+..
T Consensus 109 ~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 109 HTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 999999999999999999999999998764
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.5e-18 Score=140.92 Aligned_cols=105 Identities=15% Similarity=0.126 Sum_probs=98.8
Q ss_pred HHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCc-------h
Q 011184 379 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW-------H 451 (491)
Q Consensus 379 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~-------~ 451 (491)
...+.++.++|+.+++.|+|++|++.|++||+++|+ ++.+|+++|.+|..+|++++|+.+|++||+++|++ +
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~-~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a 83 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPS-NITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIA 83 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHH
Confidence 356788999999999999999999999999999999 99999999999999999999999999999999876 4
Q ss_pred HHHHHHHHHHHHCCChHHHHHHHHHHHcccccc
Q 011184 452 IASYLQAAALSAMGMENEAQVALKEGTTLEAKK 484 (491)
Q Consensus 452 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 484 (491)
.+|+++|.++..+|++++|+++|++|++++|+.
T Consensus 84 ~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~~ 116 (127)
T 4gcn_A 84 KAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRDP 116 (127)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCCH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCH
Confidence 689999999999999999999999999988754
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.75 E-value=1e-17 Score=137.62 Aligned_cols=107 Identities=19% Similarity=0.189 Sum_probs=102.3
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHH
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 459 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (491)
..+..++.+|..+++.|+|++|+..|+++++++|+ ++.+|.++|.+|..+|++++|+.+|+++++++|+++.+|+++|.
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKAT 80 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 46788999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHHHccc------cccccc
Q 011184 460 ALSAMGMENEAQVALKEGTTLE------AKKNST 487 (491)
Q Consensus 460 ~~~~~~~~~~A~~~~~~al~l~------~~~~~~ 487 (491)
++..+|++++|++.|+++++++ |.+...
T Consensus 81 ~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~ 114 (126)
T 3upv_A 81 AQIAVKEYASALETLDAARTKDAEVNNGSSAREI 114 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHH
T ss_pred HHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHH
Confidence 9999999999999999999999 766554
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.75 E-value=7.4e-18 Score=145.20 Aligned_cols=108 Identities=24% Similarity=0.234 Sum_probs=102.2
Q ss_pred hhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhc------------------CCCCcHHHHhhHHHHHHhcCChHHHHH
Q 011184 377 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA------------------GTMVSPTVYARRSLCYLMSDMPQDALN 438 (491)
Q Consensus 377 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~------------------~p~~~~~~~~~~~~~~~~~~~~~~A~~ 438 (491)
+....+..+..+|+.+++.|+|++|+..|++||++ +|. ...+|+++|.||..+|++++|+.
T Consensus 6 e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~A~~ 84 (162)
T 3rkv_A 6 DKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRK-NIPLYANMSQCYLNIGDLHEAEE 84 (162)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHT-HHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHH-HHHHHHHHHHHHHhcCcHHHHHH
Confidence 34567889999999999999999999999999999 676 77899999999999999999999
Q ss_pred HHHHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHccccccc
Q 011184 439 DAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 439 ~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 485 (491)
+|++||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++.
T Consensus 85 ~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 131 (162)
T 3rkv_A 85 TSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAA 131 (162)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCH
Confidence 99999999999999999999999999999999999999999999987
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.74 E-value=5.7e-19 Score=170.83 Aligned_cols=145 Identities=13% Similarity=0.114 Sum_probs=103.9
Q ss_pred HHHHhcCCccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCC--------------ChhHH--------HHHHHH
Q 011184 49 LKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP--------------DPRQF--------LEEARS 106 (491)
Q Consensus 49 ~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------~~~~~--------~~E~~~ 106 (491)
+....+.-..|.+.+.||.|++|.||+|...+|+.||||+++..... ..... .+|...
T Consensus 87 L~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~n 166 (397)
T 4gyi_A 87 LHTHAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAF 166 (397)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHH
Confidence 34444444568889999999999999999888999999998642110 01111 345666
Q ss_pred HhccCCCCcc--eEEeEeecCCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccc
Q 011184 107 VGQLRNNRLT--NLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 184 (491)
Q Consensus 107 l~~l~H~niv--~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp 184 (491)
|.++.+.++. ..+++ . ..+|||||++|++|..+.. .+ ....++.||+.+|.+||+.| ||||||||
T Consensus 167 L~rL~~~gv~vp~p~~~--~--~~~LVME~i~G~~L~~l~~------~~--~~~~l~~qll~~l~~lH~~g-IVHrDLKp 233 (397)
T 4gyi_A 167 MKALYEEGFPVPEPIAQ--S--RHTIVMSLVDALPMRQVSS------VP--DPASLYADLIALILRLAKHG-LIHGDFNE 233 (397)
T ss_dssp HHHHHHTTCSCCCEEEE--E--TTEEEEECCSCEEGGGCCC------CS--CHHHHHHHHHHHHHHHHHTT-EECSCCST
T ss_pred HHHHHhcCCCCCeeeec--c--CceEEEEecCCccHhhhcc------cH--HHHHHHHHHHHHHHHHHHCC-CcCCCCCH
Confidence 6666544432 22222 1 2379999999988865432 11 23567899999999999999 99999999
Q ss_pred cceeeCCCCC----------eEEccCCCcccC
Q 011184 185 YRILFDEDGN----------PRLSTFGLMKNS 206 (491)
Q Consensus 185 ~Nill~~~~~----------~kl~Dfgla~~~ 206 (491)
.|||++++|. +.|+||+.+...
T Consensus 234 ~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 234 FNILIREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp TSEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred HHEEEeCCCCcccccccccceEEEEeCCcccC
Confidence 9999987763 899999987653
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.3e-17 Score=141.78 Aligned_cols=112 Identities=11% Similarity=0.083 Sum_probs=105.3
Q ss_pred hhhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHH
Q 011184 376 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 455 (491)
Q Consensus 376 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 455 (491)
...+..+..++..|..+++.|+|++|++.|+++|+++|+ ++.+|+++|.+|..+|++++|+..|++|++++|+++.+|+
T Consensus 25 ~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 103 (150)
T 4ga2_A 25 PSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQER-DPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVL 103 (150)
T ss_dssp CSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred ccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHH
Confidence 346678889999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCChHHHHHH-HHHHHcccccccccc
Q 011184 456 LQAAALSAMGMENEAQVA-LKEGTTLEAKKNSTA 488 (491)
Q Consensus 456 ~~g~~~~~~~~~~~A~~~-~~~al~l~~~~~~~~ 488 (491)
++|.+|..+|++++|.+. +++|++++|++..++
T Consensus 104 ~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~ 137 (150)
T 4ga2_A 104 KIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVY 137 (150)
T ss_dssp HHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHH
Confidence 999999999999988776 599999999998764
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=5.2e-17 Score=137.70 Aligned_cols=110 Identities=11% Similarity=0.006 Sum_probs=104.9
Q ss_pred hhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHH
Q 011184 377 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 456 (491)
Q Consensus 377 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 456 (491)
-.+.++..++.+|..+++.|+|++|+..|++++.++|+ ++.+|+++|.+|..+|++++|+..|++|++++|+++.+|++
T Consensus 16 ~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~ 94 (148)
T 2vgx_A 16 ISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY-DSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFH 94 (148)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHH
T ss_pred CCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHH
Confidence 35678889999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCChHHHHHHHHHHHccccccccc
Q 011184 457 QAAALSAMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 457 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
+|.+|..+|++++|+++|++|++++|++...
T Consensus 95 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 125 (148)
T 2vgx_A 95 AAECLLQXGELAEAESGLFLAQELIANXPEF 125 (148)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHTTCGGG
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCcCCCcc
Confidence 9999999999999999999999999986653
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.72 E-value=3.6e-17 Score=141.15 Aligned_cols=110 Identities=25% Similarity=0.293 Sum_probs=105.6
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 457 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (491)
...++..++.+|..+++.|+|++|++.|+++++++|+ +..+|+++|.+|..+|++++|+.+|+++++++|+++.+|+++
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 85 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPA-NPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRL 85 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3467889999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 458 AAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 458 g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
|.+|..+|++++|+++|+++++++|++..+|
T Consensus 86 g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 116 (164)
T 3sz7_A 86 GLARFDMADYKGAKEAYEKGIEAEGNGGSDA 116 (164)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHSSSCCHH
T ss_pred HHHHHHccCHHHHHHHHHHHHHhCCCchHHH
Confidence 9999999999999999999999999998754
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.71 E-value=1.1e-16 Score=134.60 Aligned_cols=109 Identities=10% Similarity=0.061 Sum_probs=104.5
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 457 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (491)
.+.++..++.+|..+++.|+|++|+..|++++..+|+ ++.+|.++|.+|..+|++++|+..|++|++++|+++.+|+++
T Consensus 14 ~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 92 (142)
T 2xcb_A 14 SEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHY-DARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHA 92 (142)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHH
Confidence 5677889999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHHHccccccccc
Q 011184 458 AAALSAMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 458 g~~~~~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
|.+|..+|++++|++.|+++++++|.+...
T Consensus 93 g~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 122 (142)
T 2xcb_A 93 AECHLQLGDLDGAESGFYSARALAAAQPAH 122 (142)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHTCGGG
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCcch
Confidence 999999999999999999999999987654
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.69 E-value=1.3e-16 Score=130.22 Aligned_cols=103 Identities=12% Similarity=0.056 Sum_probs=93.6
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHH
Q 011184 383 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 462 (491)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 462 (491)
..++.+|..+++.|++++|+..|+++++.+|+ ++.+|+++|.++..+|++++|+..|++|++++|+++.+|+++|.+|.
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~ 96 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHT 96 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 35788999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HCCChHHHHHHHHHHHcccccccc
Q 011184 463 AMGMENEAQVALKEGTTLEAKKNS 486 (491)
Q Consensus 463 ~~~~~~~A~~~~~~al~l~~~~~~ 486 (491)
.+|++++|+..|+++++++|++..
T Consensus 97 ~~g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 97 NEHNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHHHHC-------
T ss_pred HcCCHHHHHHHHHHHHHhCcCCCC
Confidence 999999999999999999998754
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.64 E-value=5.5e-16 Score=139.43 Aligned_cols=107 Identities=16% Similarity=0.019 Sum_probs=97.0
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhh----------------HHHHHHhcCChHHHHHHHHHHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYAR----------------RSLCYLMSDMPQDALNDAMQAQ 444 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~----------------~~~~~~~~~~~~~A~~~~~~al 444 (491)
++..++.+|..+++.|+|++|+..|+++++++|+ ++.+|+. +|.+|..+|++++|+..|++++
T Consensus 3 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 81 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAGQNGQAVSYFRQTIALNID-RTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELL 81 (208)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH-HHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-ChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 4567888999999999999999999999999998 8888888 9999999999999999999999
Q ss_pred hhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 445 IISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 445 ~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
+++|+++.+|+++|.++..+|++++|++.|+++++++|++..++
T Consensus 82 ~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~ 125 (208)
T 3urz_A 82 QKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAAN 125 (208)
T ss_dssp HHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Confidence 99999999999999999999999999999999999999987765
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=9.3e-16 Score=162.41 Aligned_cols=112 Identities=17% Similarity=0.070 Sum_probs=102.8
Q ss_pred hhhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHH
Q 011184 376 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 455 (491)
Q Consensus 376 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 455 (491)
+-.+..+.++.++|.++.+.|++++|++.|++||+++|+ ++.+|+++|.+|..+|++++|++.|++|++++|+++.+|+
T Consensus 37 ~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~-~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~ 115 (723)
T 4gyw_A 37 EVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT-FADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHS 115 (723)
T ss_dssp HHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 345567889999999999999999999999999999999 8899999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 456 LQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 456 ~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
++|.+|..+|++++|+++|++|++++|++..++
T Consensus 116 ~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~ 148 (723)
T 4gyw_A 116 NLASIHKDSGNIPEAIASYRTALKLKPDFPDAY 148 (723)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHH
Confidence 999999999999999999999999999987765
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=99.64 E-value=2e-15 Score=125.48 Aligned_cols=104 Identities=23% Similarity=0.372 Sum_probs=100.4
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHH
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 459 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (491)
.++..++..|..++..|+|++|+..|+++++++|+ +..++.++|.++..+|++++|+..|+++++++|+++.+|+++|.
T Consensus 7 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 85 (137)
T 3q49_B 7 PSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQ 85 (137)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHH
Confidence 35678999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHHHcccccc
Q 011184 460 ALSAMGMENEAQVALKEGTTLEAKK 484 (491)
Q Consensus 460 ~~~~~~~~~~A~~~~~~al~l~~~~ 484 (491)
++..+|++++|+..|++|++++|++
T Consensus 86 ~~~~~~~~~~A~~~~~~a~~~~p~~ 110 (137)
T 3q49_B 86 CQLEMESYDEAIANLQRAYSLAKEQ 110 (137)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhhHHHHHHHHHHHHHHChhH
Confidence 9999999999999999999999983
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.63 E-value=2.2e-16 Score=132.32 Aligned_cols=95 Identities=12% Similarity=0.028 Sum_probs=88.6
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCCh----------HHHHHHHHHHHhhCCCchHHHHHHHHHHH
Q 011184 393 FRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMP----------QDALNDAMQAQIISPIWHIASYLQAAALS 462 (491)
Q Consensus 393 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~----------~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 462 (491)
-+.+.|++|++.|++|++++|+ ++.+|+++|.++..++++ ++|+..|++||+++|++..+|+++|.+|.
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~-~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~ 91 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYT 91 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHH
Confidence 3667899999999999999999 999999999999999876 49999999999999999999999999999
Q ss_pred HCC-----------ChHHHHHHHHHHHcccccccccc
Q 011184 463 AMG-----------MENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 463 ~~~-----------~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
.+| ++++|+++|++|++++|++...+
T Consensus 92 ~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~ 128 (158)
T 1zu2_A 92 SFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYL 128 (158)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHH
Confidence 885 89999999999999999987654
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.62 E-value=2.8e-15 Score=145.28 Aligned_cols=113 Identities=14% Similarity=0.132 Sum_probs=106.4
Q ss_pred hhhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc--------------HHHHhhHHHHHHhcCChHHHHHHHH
Q 011184 376 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS--------------PTVYARRSLCYLMSDMPQDALNDAM 441 (491)
Q Consensus 376 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~--------------~~~~~~~~~~~~~~~~~~~A~~~~~ 441 (491)
...+..+..++.+|..+++.|+|++|+..|++|++++|++. ..+|+++|.+|.++|++++|+.+|+
T Consensus 141 ~~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~ 220 (336)
T 1p5q_A 141 EEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCN 220 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 34667899999999999999999999999999999999932 6899999999999999999999999
Q ss_pred HHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 442 QAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 442 ~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
+|++++|+++.+|+++|.+|..+|++++|+.+|++|++++|++..++
T Consensus 221 ~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~ 267 (336)
T 1p5q_A 221 KALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAK 267 (336)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHH
T ss_pred HHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH
Confidence 99999999999999999999999999999999999999999987654
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.62 E-value=5.9e-15 Score=118.51 Aligned_cols=107 Identities=26% Similarity=0.368 Sum_probs=102.6
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 460 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (491)
.+..++..|..++..|+|++|+..|+++++.+|+ +..++.++|.++..+|++++|+..++++++++|+++.+++++|.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 81 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 81 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 5678999999999999999999999999999999 889999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHHHcccccccccc
Q 011184 461 LSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
+..+|++++|++.|+++++++|++..++
T Consensus 82 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 109 (118)
T 1elw_A 82 LEFLNRFEEAKRTYEEGLKHEANNPQLK 109 (118)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHcCCCCHHHH
Confidence 9999999999999999999999887654
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.62 E-value=3.2e-15 Score=151.11 Aligned_cols=113 Identities=15% Similarity=0.177 Sum_probs=102.9
Q ss_pred hhhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc--------------HHHHhhHHHHHHhcCChHHHHHHHH
Q 011184 376 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS--------------PTVYARRSLCYLMSDMPQDALNDAM 441 (491)
Q Consensus 376 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~--------------~~~~~~~~~~~~~~~~~~~A~~~~~ 441 (491)
...+..+..++.+|+.+++.|+|++|+..|++||+++|.+. ..+|+++|.||.++|++++|+.+|+
T Consensus 262 ~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~ 341 (457)
T 1kt0_A 262 KEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCD 341 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 34667889999999999999999999999999999999932 6899999999999999999999999
Q ss_pred HHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 442 QAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 442 ~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
+||+++|+++.+|+++|.+|+.+|+|++|+.+|++|++++|++..++
T Consensus 342 ~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~ 388 (457)
T 1kt0_A 342 KALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAAR 388 (457)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHH
T ss_pred HHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999999999999999999999988764
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.62 E-value=4.5e-15 Score=132.17 Aligned_cols=112 Identities=19% Similarity=0.243 Sum_probs=105.4
Q ss_pred hhhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcH----------------HHHhhHHHHHHhcCChHHHHHH
Q 011184 376 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP----------------TVYARRSLCYLMSDMPQDALND 439 (491)
Q Consensus 376 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~----------------~~~~~~~~~~~~~~~~~~A~~~ 439 (491)
.+....+..+..+|..++..|+|++|++.|++++++.|. .+ .++.++|.+|..+|++++|+.+
T Consensus 32 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~ 110 (198)
T 2fbn_A 32 EEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIH-TEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDH 110 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT-CTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 446678889999999999999999999999999999998 55 8899999999999999999999
Q ss_pred HHHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 440 AMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 440 ~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
|+++++++|+++.+++++|.+|..+|++++|++.|++|++++|++..++
T Consensus 111 ~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 159 (198)
T 2fbn_A 111 ASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIR 159 (198)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHH
Confidence 9999999999999999999999999999999999999999999987654
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=2.9e-16 Score=133.38 Aligned_cols=101 Identities=8% Similarity=-0.077 Sum_probs=93.0
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHCCC
Q 011184 387 KKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGM 466 (491)
Q Consensus 387 ~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~ 466 (491)
.+|..+..+|++++|++.|.+++..+|+ ++..++++|.+|..+|++++|++.|+++++++|+++.+|+++|.+|..+|+
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~~~p~-~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~ 80 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTPSPRQ-KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEEN 80 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSCSHHH-HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HhHHHHHHcChHHHHHHHHHHhcccCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCc
Confidence 3678888999999999999999999999 888999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHcccccccccc
Q 011184 467 ENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 467 ~~~A~~~~~~al~l~~~~~~~~ 488 (491)
+++|+.+|++|++++|++..++
T Consensus 81 ~~~A~~~~~~al~~~p~~~~~~ 102 (150)
T 4ga2_A 81 TDKAVECYRRSVELNPTQKDLV 102 (150)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHH
T ss_pred hHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999999999999988764
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.61 E-value=6.1e-15 Score=121.39 Aligned_cols=108 Identities=26% Similarity=0.317 Sum_probs=103.0
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHH
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 459 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (491)
..+.+++.+|..+++.|+|++|++.|+++++.+|+ +..++.++|.++...|++++|+..++++++++|+++.+++++|.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~ 92 (133)
T 2lni_A 14 DLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAA 92 (133)
T ss_dssp CHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTT-CHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 45778999999999999999999999999999999 88999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 460 ALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 460 ~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
++..+|++++|++.|+++++++|.+..++
T Consensus 93 ~~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 121 (133)
T 2lni_A 93 ALEAMKDYTKAMDVYQKALDLDSSCKEAA 121 (133)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCGGGTHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHhCCCchHHH
Confidence 99999999999999999999999887654
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=3.5e-15 Score=158.03 Aligned_cols=109 Identities=13% Similarity=0.065 Sum_probs=95.2
Q ss_pred HHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHH
Q 011184 379 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 458 (491)
Q Consensus 379 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 458 (491)
+.++.++.++|..+.+.|+|++|++.|++||+++|+ +..+|+++|.+|.++|++++|++.|++||+++|+++.+|+++|
T Consensus 6 P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~-~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg 84 (723)
T 4gyw_A 6 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE-FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMG 84 (723)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 467788888888888888888888888888888888 8888888888888888888888888888888888888888888
Q ss_pred HHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 459 AALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 459 ~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
.+|..+|++++|+++|++|++++|++..++
T Consensus 85 ~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~ 114 (723)
T 4gyw_A 85 NTLKEMQDVQGALQCYTRAIQINPAFADAH 114 (723)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 888888888888888888888888887665
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.60 E-value=1.8e-15 Score=148.69 Aligned_cols=115 Identities=9% Similarity=-0.039 Sum_probs=106.3
Q ss_pred hhhhhHHHHHhHHHHHHHHHHhcC-HHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchH
Q 011184 374 MWTDQMQETLNSKKKGDVAFRQKD-LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI 452 (491)
Q Consensus 374 ~~~~~~~~~~~~~~~g~~~~~~~~-~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~ 452 (491)
...-.+.++..|+.+|.++...|+ |++|+..|++||+++|+ ++.+|+++|.++..+|++++|+.+|++||+++|++..
T Consensus 123 al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~-~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~ 201 (382)
T 2h6f_A 123 AIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYH 201 (382)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHH
T ss_pred HHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHH
Confidence 334456778899999999999996 99999999999999999 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCChHHHHHHHHHHHccccccccccc
Q 011184 453 ASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 489 (491)
Q Consensus 453 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~ 489 (491)
+|+++|.++..+|++++|+++|++|++++|++..+|.
T Consensus 202 a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~ 238 (382)
T 2h6f_A 202 AWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWN 238 (382)
T ss_dssp HHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHH
Confidence 9999999999999999999999999999999988774
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.60 E-value=2.6e-15 Score=135.88 Aligned_cols=108 Identities=13% Similarity=0.144 Sum_probs=103.1
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHH
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 459 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (491)
.++..++.+|..+++.|++++|+..|+++++++|+ ++.++.++|.++..+|++++|+..|+++++++|+++.+|+++|.
T Consensus 3 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~ 81 (217)
T 2pl2_A 3 TAEQNPLRLGVQLYALGRYDAALTLFERALKENPQ-DPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSE 81 (217)
T ss_dssp -CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 45678899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHC-----------CChHHHHHHHHHHHcccccccccc
Q 011184 460 ALSAM-----------GMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 460 ~~~~~-----------~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
++..+ |++++|+..|++|++++|++..++
T Consensus 82 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~ 121 (217)
T 2pl2_A 82 AYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLH 121 (217)
T ss_dssp HHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHH
Confidence 99999 999999999999999999987664
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.59 E-value=4.1e-15 Score=146.18 Aligned_cols=112 Identities=10% Similarity=-0.081 Sum_probs=107.2
Q ss_pred hhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCC-hHHHHHHHHHHHhhCCCchHHHH
Q 011184 377 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM-PQDALNDAMQAQIISPIWHIASY 455 (491)
Q Consensus 377 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~-~~~A~~~~~~al~l~p~~~~a~~ 455 (491)
..+..+..+..+|..+.+.|++++|++.|+++|+++|+ +..+|+++|.++..+|+ +++|+.+|++||+++|+++.+|+
T Consensus 92 ~~p~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~-~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~ 170 (382)
T 2h6f_A 92 YSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAA-NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWH 170 (382)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CChhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCcc-CHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHH
Confidence 34577889999999999999999999999999999999 99999999999999997 99999999999999999999999
Q ss_pred HHHHHHHHCCChHHHHHHHHHHHccccccccccc
Q 011184 456 LQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 489 (491)
Q Consensus 456 ~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~ 489 (491)
++|.++..+|++++|+.+|++|++++|++..+|.
T Consensus 171 ~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~ 204 (382)
T 2h6f_A 171 HRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQ 204 (382)
T ss_dssp HHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHH
Confidence 9999999999999999999999999999988774
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.58 E-value=1.3e-14 Score=121.85 Aligned_cols=107 Identities=22% Similarity=0.238 Sum_probs=101.8
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc---HHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 457 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (491)
++..++.+|..++..|+|++|++.|+++++++|+ + ..++.++|.+|..+|++++|+..|+++++++|+++.+|+++
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 105 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDAT-PQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRR 105 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCC-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccc-chHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHH
Confidence 4667889999999999999999999999999998 6 78899999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 458 AAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 458 g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
|.++..+|++++|+..|+++++++|++..++
T Consensus 106 a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 136 (148)
T 2dba_A 106 SQALEKLGRLDQAVLDLQRCVSLEPKNKVFQ 136 (148)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCSSCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCcHHHH
Confidence 9999999999999999999999999987654
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.58 E-value=2.1e-14 Score=123.11 Aligned_cols=110 Identities=24% Similarity=0.307 Sum_probs=104.2
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 457 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (491)
....+..++.+|..++..|+|++|+..|.++++.+|. +..++.++|.++..+|++++|+..++++++++|.++.+|+++
T Consensus 9 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 87 (166)
T 1a17_A 9 ALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRR 87 (166)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 3467889999999999999999999999999999999 889999999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 458 AAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 458 g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
|.++..+|++++|+..|+++++++|++..++
T Consensus 88 a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 118 (166)
T 1a17_A 88 AASNMALGKFRAALRDYETVVKVKPHDKDAK 118 (166)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999999999999999999999887654
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.58 E-value=1.4e-14 Score=127.05 Aligned_cols=106 Identities=20% Similarity=0.172 Sum_probs=101.3
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHH
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 459 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (491)
..+..+...|..+...++++.|++.+.++++++|+ +..++..+|.+|..+|++++|++.|+++++++|+++.+|+++|.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~ 149 (184)
T 3vtx_A 71 TSAEAYYILGSANFMIDEKQAAIDALQRAIALNTV-YADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGL 149 (184)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHH
Confidence 45667888999999999999999999999999999 88999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHHHcccccccc
Q 011184 460 ALSAMGMENEAQVALKEGTTLEAKKNS 486 (491)
Q Consensus 460 ~~~~~~~~~~A~~~~~~al~l~~~~~~ 486 (491)
+|..+|++++|+++|++|++++|++..
T Consensus 150 ~~~~~g~~~~A~~~~~~al~~~p~~a~ 176 (184)
T 3vtx_A 150 AYEGKGLRDEAVKYFKKALEKEEKKAK 176 (184)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHhCCccCHH
Confidence 999999999999999999999998764
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=99.58 E-value=1.4e-14 Score=119.01 Aligned_cols=105 Identities=13% Similarity=0.015 Sum_probs=98.4
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcH---HHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCc---hHHHH
Q 011184 382 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP---TVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---HIASY 455 (491)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~---~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~---~~a~~ 455 (491)
+..++.+|..++..|+|++|++.|+++++.+|+ +. .+++++|.++..+|++++|+..|+++++++|++ +.+++
T Consensus 2 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~ 80 (129)
T 2xev_A 2 ARTAYNVAFDALKNGKYDDASQLFLSFLELYPN-GVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLL 80 (129)
T ss_dssp -CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHH
T ss_pred cHHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHH
Confidence 346789999999999999999999999999998 66 788999999999999999999999999999999 89999
Q ss_pred HHHHHHHHCCChHHHHHHHHHHHccccccccc
Q 011184 456 LQAAALSAMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 456 ~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
++|.++..+|++++|+..|+++++.+|++..+
T Consensus 81 ~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~ 112 (129)
T 2xev_A 81 KLGLSQYGEGKNTEAQQTLQQVATQYPGSDAA 112 (129)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCCCChHH
Confidence 99999999999999999999999999987654
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.58 E-value=3e-14 Score=116.53 Aligned_cols=110 Identities=19% Similarity=0.251 Sum_probs=104.8
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 457 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (491)
.+..+..++.+|..++..|++++|++.|+++++.+|+ +..++.++|.++...|++++|+..++++++++|+++.+++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 86 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPA-NAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRM 86 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHH
Confidence 4567889999999999999999999999999999999 889999999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 458 AAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 458 g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
|.++..+|++++|+..|+++++++|++..++
T Consensus 87 ~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 117 (131)
T 2vyi_A 87 GLALSSLNKHVEAVAYYKKALELDPDNETYK 117 (131)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHhcCccchHHH
Confidence 9999999999999999999999999887654
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=99.57 E-value=7.8e-15 Score=143.82 Aligned_cols=113 Identities=18% Similarity=0.217 Sum_probs=105.5
Q ss_pred hhhhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHh----------------cCCCCcHHHHhhHHHHHHhcCChHHHHH
Q 011184 375 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFID----------------AGTMVSPTVYARRSLCYLMSDMPQDALN 438 (491)
Q Consensus 375 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~----------------~~p~~~~~~~~~~~~~~~~~~~~~~A~~ 438 (491)
..+....+..+..+|+.+++.|+|++|++.|++||+ ++|. ...+|+++|.+|.++|++++|+.
T Consensus 216 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~g~~~~A~~ 294 (370)
T 1ihg_A 216 VDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGAVD 294 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHH-HHHHHHHHHHHHHhccCHHHHHH
Confidence 344556788899999999999999999999999998 7787 88999999999999999999999
Q ss_pred HHHHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 439 DAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 439 ~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
+|++|++++|+++.+|+++|.+|..+|+|++|+++|++|++++|++..++
T Consensus 295 ~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~ 344 (370)
T 1ihg_A 295 SCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQ 344 (370)
T ss_dssp HHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999999999999999999999999987654
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.57 E-value=5e-15 Score=143.54 Aligned_cols=113 Identities=12% Similarity=0.143 Sum_probs=98.1
Q ss_pred hhhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcH-----------------HHHhhHHHHHHhcCChHHHHH
Q 011184 376 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP-----------------TVYARRSLCYLMSDMPQDALN 438 (491)
Q Consensus 376 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~-----------------~~~~~~~~~~~~~~~~~~A~~ 438 (491)
.+.+..+..++.+|+.+++.|+|++|+..|++|++++|+ +. .+|+++|.+|.++|++++|+.
T Consensus 173 ~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~ 251 (338)
T 2if4_A 173 EERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGD-DFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIG 251 (338)
T ss_dssp HHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCH-HHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcc-chhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 456678889999999999999999999999999999998 55 389999999999999999999
Q ss_pred HHHHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHccccccccccc
Q 011184 439 DAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 489 (491)
Q Consensus 439 ~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~ 489 (491)
+|++||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++..++.
T Consensus 252 ~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~ 302 (338)
T 2if4_A 252 HCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRR 302 (338)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC----------
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHH
Confidence 999999999999999999999999999999999999999999999887654
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=99.57 E-value=1.4e-14 Score=136.68 Aligned_cols=105 Identities=23% Similarity=0.364 Sum_probs=100.9
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 460 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (491)
++..++.+|..+++.|+|++|+..|++|++++|+ ++.+|+++|.+|..+|++++|+.+|++|++++|+++.+|+++|.+
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 81 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3568899999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHHHcccccccc
Q 011184 461 LSAMGMENEAQVALKEGTTLEAKKNS 486 (491)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~l~~~~~~ 486 (491)
|..+|++++|+..|++|++++|++..
T Consensus 82 ~~~~g~~~~A~~~~~~al~l~p~~~~ 107 (281)
T 2c2l_A 82 QLEMESYDEAIANLQRAYSLAKEQRL 107 (281)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHHHHHHhCccchh
Confidence 99999999999999999999998743
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.7e-14 Score=128.32 Aligned_cols=109 Identities=8% Similarity=-0.053 Sum_probs=98.4
Q ss_pred hhhHHHHHhHHH----------------HHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHH
Q 011184 376 TDQMQETLNSKK----------------KGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALND 439 (491)
Q Consensus 376 ~~~~~~~~~~~~----------------~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~ 439 (491)
...+.++..++. +|..+++.|+|++|+..|+++++++|+ +..++.++|.+|..+|++++|+..
T Consensus 32 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~ 110 (208)
T 3urz_A 32 ALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAPN-NVDCLEACAEMQVCRGQEKDALRM 110 (208)
T ss_dssp HHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHH
Confidence 345567777777 999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHhhCCCchHHHHHHHHHHHHC-----------------------------------CChHHHHHHHHHHHcccccc
Q 011184 440 AMQAQIISPIWHIASYLQAAALSAM-----------------------------------GMENEAQVALKEGTTLEAKK 484 (491)
Q Consensus 440 ~~~al~l~p~~~~a~~~~g~~~~~~-----------------------------------~~~~~A~~~~~~al~l~~~~ 484 (491)
|+++++++|+++.+|+++|.+|+.+ |+|++|+.+|++|++++|+.
T Consensus 111 ~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 190 (208)
T 3urz_A 111 YEKILQLEADNLAANIFLGNYYYLTAEQEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPST 190 (208)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCH
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCH
Confidence 9999999999999999888877433 46899999999999999975
Q ss_pred c
Q 011184 485 N 485 (491)
Q Consensus 485 ~ 485 (491)
.
T Consensus 191 ~ 191 (208)
T 3urz_A 191 E 191 (208)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.4e-14 Score=113.87 Aligned_cols=104 Identities=12% Similarity=0.074 Sum_probs=98.7
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCC--chHHHHHHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPI--WHIASYLQA 458 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~--~~~a~~~~g 458 (491)
++..++.+|..++..|++++|+..|+++++++|. +..++.++|.++..+|++++|+..++++++++|. +..+++++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~ 83 (112)
T 2kck_A 5 NPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPE-ESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKA 83 (112)
T ss_dssp STTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHH
Confidence 3456788899999999999999999999999999 8899999999999999999999999999999999 999999999
Q ss_pred HHHHHC-CChHHHHHHHHHHHccccccc
Q 011184 459 AALSAM-GMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 459 ~~~~~~-~~~~~A~~~~~~al~l~~~~~ 485 (491)
.++..+ |++++|+++|+++++.+|.+.
T Consensus 84 ~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 84 DALRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp HHHTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred HHHHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 999999 999999999999999999764
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.5e-14 Score=130.85 Aligned_cols=106 Identities=13% Similarity=-0.002 Sum_probs=61.3
Q ss_pred HHHHhHHHHHHHHHHh-----------cCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCC
Q 011184 380 QETLNSKKKGDVAFRQ-----------KDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISP 448 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~-----------~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p 448 (491)
.++..++.+|..+... |++++|+..|+++++++|+ ++.++.++|.+|..+|++++|+..|++|++++
T Consensus 71 ~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~- 148 (217)
T 2pl2_A 71 RYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPR-YAPLHLQRGLVYALLGERDKAEASLKQALALE- 148 (217)
T ss_dssp TCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-
T ss_pred CcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-
Confidence 3344555555555555 5555555555555555555 55555555555555555555555555555555
Q ss_pred CchHHHHHHHHHHHHCCChHHHHHHHHHHHccccccccc
Q 011184 449 IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 449 ~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
+++.+++++|.+|..+|++++|+..|+++++++|++..+
T Consensus 149 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~~ 187 (217)
T 2pl2_A 149 DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDL 187 (217)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHH
Confidence 555555555666655666666666666666555555443
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.55 E-value=3.4e-14 Score=129.28 Aligned_cols=104 Identities=17% Similarity=0.102 Sum_probs=99.8
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCC-CCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGT-MVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 459 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p-~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (491)
++..++.+|..++..|+|++|++.|+++++++| . +..+++++|.++..+|++++|+..|+++++++|+++.+|+++|.
T Consensus 6 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 84 (228)
T 4i17_A 6 DPNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQ-DSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSA 84 (228)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCC-CcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHH
Confidence 457899999999999999999999999999998 6 77888889999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHHHccccccc
Q 011184 460 ALSAMGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 460 ~~~~~~~~~~A~~~~~~al~l~~~~~ 485 (491)
+|..+|++++|++.|+++++++|++.
T Consensus 85 ~~~~~~~~~~A~~~~~~al~~~p~~~ 110 (228)
T 4i17_A 85 AYRDMKNNQEYIATLTEGIKAVPGNA 110 (228)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHcccHHHHHHHHHHHHHHCCCcH
Confidence 99999999999999999999999987
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.53 E-value=7.5e-14 Score=122.35 Aligned_cols=112 Identities=19% Similarity=0.168 Sum_probs=92.5
Q ss_pred hhhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHH
Q 011184 376 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 455 (491)
Q Consensus 376 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 455 (491)
...+.++..+..+|..+++.|++++|+..+.+++..+|+ ...++...|.++...++++.|+..+.++++++|++..+++
T Consensus 33 ~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~ 111 (184)
T 3vtx_A 33 KADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTT-SAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYY 111 (184)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHH
Confidence 335566777788888888888888888888888888887 7777778888888888888888888888888888888999
Q ss_pred HHHHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 456 LQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 456 ~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
.+|.+|..+|++++|++.|+++++++|.+..++
T Consensus 112 ~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~ 144 (184)
T 3vtx_A 112 KLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAY 144 (184)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHhCCchhHHHHHHHHHHhcchhhhHH
Confidence 999999999999999999999999998887664
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.52 E-value=7.8e-15 Score=118.73 Aligned_cols=93 Identities=12% Similarity=0.009 Sum_probs=84.3
Q ss_pred HhcCHHHHHHHHHHHHhc---CCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHCCChHHH
Q 011184 394 RQKDLKDAIECYTQFIDA---GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEA 470 (491)
Q Consensus 394 ~~~~~~~A~~~~~~al~~---~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A 470 (491)
..|++++|+..|++++++ +|+ +..++.++|.+|..+|++++|+..|+++++++|+++.+++++|.++..+|++++|
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 80 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKD-LAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQG 80 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcc-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHH
Confidence 468999999999999999 587 8899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHccccccccc
Q 011184 471 QVALKEGTTLEAKKNST 487 (491)
Q Consensus 471 ~~~~~~al~l~~~~~~~ 487 (491)
++.|+++++++|++...
T Consensus 81 ~~~~~~al~~~p~~~~~ 97 (117)
T 3k9i_A 81 VELLLKIIAETSDDETI 97 (117)
T ss_dssp HHHHHHHHHHHCCCHHH
T ss_pred HHHHHHHHHhCCCcHHH
Confidence 99999999999988654
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=99.51 E-value=1.2e-13 Score=113.10 Aligned_cols=103 Identities=13% Similarity=0.083 Sum_probs=98.4
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCc-------hH
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW-------HI 452 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~-------~~ 452 (491)
..+..++..|..++..|+|++|+..|.++++.+|. +..++.++|.+|...|++++|+..++++++++|.+ +.
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 80 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAK 80 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHH
Confidence 35678999999999999999999999999999999 88999999999999999999999999999999988 99
Q ss_pred HHHHHHHHHHHCCChHHHHHHHHHHHccccc
Q 011184 453 ASYLQAAALSAMGMENEAQVALKEGTTLEAK 483 (491)
Q Consensus 453 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 483 (491)
+++++|.++..+|++++|++.|+++++++|+
T Consensus 81 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 111 (131)
T 1elr_A 81 AYARIGNSYFKEEKYKDAIHFYNKSLAEHRT 111 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999884
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.51 E-value=1e-13 Score=126.04 Aligned_cols=108 Identities=18% Similarity=0.157 Sum_probs=101.8
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCch-------H
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH-------I 452 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~-------~ 452 (491)
.+...++.+|..++..|+|++|++.|+++++++|+ +..++.++|.+|..+|++++|+..|+++++++|+++ .
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~ 118 (228)
T 4i17_A 40 QDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYN-LANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAI 118 (228)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCS-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcc-hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHH
Confidence 45678888999999999999999999999999999 999999999999999999999999999999999998 7
Q ss_pred HHHHHHHHHHHCCChHHHHHHHHHHHccccc--ccccc
Q 011184 453 ASYLQAAALSAMGMENEAQVALKEGTTLEAK--KNSTA 488 (491)
Q Consensus 453 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~--~~~~~ 488 (491)
+|+++|.++..+|++++|++.|++|++++|+ +..++
T Consensus 119 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 156 (228)
T 4i17_A 119 YYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDAL 156 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHH
T ss_pred HHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHH
Confidence 7999999999999999999999999999998 66554
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=99.50 E-value=2.9e-13 Score=109.59 Aligned_cols=107 Identities=17% Similarity=0.167 Sum_probs=101.3
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 460 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (491)
.+..++..|..++..|++++|++.|.++++.+|+ +..++.++|.++...|++++|+..++++++++|.+..+++.+|.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 86 (125)
T 1na0_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNA 86 (125)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHH
Confidence 3567899999999999999999999999999998 889999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHHHcccccccccc
Q 011184 461 LSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
+..+|++++|+..|+++++++|++..++
T Consensus 87 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 114 (125)
T 1na0_A 87 YYKQGDYDEAIEYYQKALELDPNNAEAK 114 (125)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHhCCCcHHHH
Confidence 9999999999999999999999876543
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.50 E-value=1.1e-13 Score=120.58 Aligned_cols=109 Identities=14% Similarity=0.065 Sum_probs=102.5
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHH-HHhcCCh--HHHHHHHHHHHhhCCCchHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLC-YLMSDMP--QDALNDAMQAQIISPIWHIAS 454 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~--~~A~~~~~~al~l~p~~~~a~ 454 (491)
.+.++..++.+|..++..|+|++|+..|+++++++|+ ++.++.++|.+ +...|++ ++|+..++++++++|++..++
T Consensus 40 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 118 (177)
T 2e2e_A 40 NPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGE-NAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITAL 118 (177)
T ss_dssp CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCS-CHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHH
Confidence 3456678999999999999999999999999999999 88999999999 8899999 999999999999999999999
Q ss_pred HHHHHHHHHCCChHHHHHHHHHHHccccccccc
Q 011184 455 YLQAAALSAMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 455 ~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
+++|.++..+|++++|+..|+++++++|.+...
T Consensus 119 ~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 151 (177)
T 2e2e_A 119 MLLASDAFMQANYAQAIELWQKVMDLNSPRINR 151 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCH
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHhhCCCCccH
Confidence 999999999999999999999999999988653
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.50 E-value=2.8e-13 Score=121.54 Aligned_cols=105 Identities=16% Similarity=0.113 Sum_probs=99.6
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCch---------
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH--------- 451 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~--------- 451 (491)
++..++.+|..++..|+|++|++.|+++++++|+ +..+++++|.+|..+|++++|+..|++++++.|.+.
T Consensus 36 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 114 (213)
T 1hh8_A 36 HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGL 114 (213)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTB
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhcc
Confidence 4678999999999999999999999999999999 899999999999999999999999999999888876
Q ss_pred -------HHHHHHHHHHHHCCChHHHHHHHHHHHcccccccc
Q 011184 452 -------IASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 486 (491)
Q Consensus 452 -------~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 486 (491)
.+++++|.++..+|++++|++.|++|++++|++..
T Consensus 115 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 156 (213)
T 1hh8_A 115 QFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRH 156 (213)
T ss_dssp CCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGG
T ss_pred ccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccccc
Confidence 99999999999999999999999999999997653
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.48 E-value=3.4e-14 Score=144.16 Aligned_cols=109 Identities=24% Similarity=0.310 Sum_probs=103.8
Q ss_pred HHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHH
Q 011184 379 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 458 (491)
Q Consensus 379 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 458 (491)
...+..++.+|..+++.|+|++|++.|++|++++|+ +..+|+++|.+|.++|++++|+++|++|++++|+++.+|+++|
T Consensus 3 ~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg 81 (477)
T 1wao_1 3 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRA 81 (477)
T ss_dssp HHHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 356778889999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 459 AALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 459 ~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
.+|..+|++++|++.|++|++++|++..++
T Consensus 82 ~~~~~~g~~~eA~~~~~~al~~~p~~~~~~ 111 (477)
T 1wao_1 82 ASNMALGKFRAALRDYETVVKVKPHDKDAK 111 (477)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHSTTCTTHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999999987654
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.47 E-value=2.6e-14 Score=121.13 Aligned_cols=91 Identities=8% Similarity=-0.206 Sum_probs=84.6
Q ss_pred CHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHH
Q 011184 397 DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 476 (491)
Q Consensus 397 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~ 476 (491)
++..+-..|+++++++|+ +..+++++|.++...|++++|+..|+++++++|+++.+|+++|.+|..+|+|++|+++|++
T Consensus 17 ~~~~~~~~l~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~ 95 (151)
T 3gyz_A 17 DAINSGATLKDINAIPDD-MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAV 95 (151)
T ss_dssp HHHHTSCCTGGGCCSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHCCCCHHHHhCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 334445678999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcccccccccc
Q 011184 477 GTTLEAKKNSTA 488 (491)
Q Consensus 477 al~l~~~~~~~~ 488 (491)
|++++|++..++
T Consensus 96 al~l~P~~~~~~ 107 (151)
T 3gyz_A 96 AFALGKNDYTPV 107 (151)
T ss_dssp HHHHSSSCCHHH
T ss_pred HHhhCCCCcHHH
Confidence 999999998765
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.46 E-value=4.1e-14 Score=112.68 Aligned_cols=96 Identities=21% Similarity=0.287 Sum_probs=90.9
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCc------hHHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW------HIAS 454 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~------~~a~ 454 (491)
++..++.+|..++..|+|++|++.|+++++++|+ ++.++.++|.++..+|++++|+..|+++++++|++ ..++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 81 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ-NPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQ 81 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHH
Confidence 5678999999999999999999999999999999 89999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHCCChHHHHHHHHHH
Q 011184 455 YLQAAALSAMGMENEAQVALKEG 477 (491)
Q Consensus 455 ~~~g~~~~~~~~~~~A~~~~~~a 477 (491)
+++|.++..+|++++|+..|++.
T Consensus 82 ~~~~~~~~~~~~~~~a~~~~~~~ 104 (111)
T 2l6j_A 82 YRLELAQGAVGSVQIPVVEVDEL 104 (111)
T ss_dssp HHHHHHHHHHHCCCCCSSSSSSC
T ss_pred HHHHHHHHHHHhHhhhHhHHHHh
Confidence 99999999999999998877653
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=3.4e-13 Score=125.79 Aligned_cols=137 Identities=12% Similarity=0.005 Sum_probs=108.0
Q ss_pred ccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccC-CCCcceEEeEeecCCeeEEEEecCCC
Q 011184 59 ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVAEYMPN 137 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~~lv~e~~~~ 137 (491)
+.+....|.|+.+.||+.... ++.+++|+...........+.+|+.+++.+. |.+++++++++...+..++||||++|
T Consensus 16 ~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G 94 (263)
T 3tm0_A 16 YRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADG 94 (263)
T ss_dssp SEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSS
T ss_pred ceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCC
Confidence 345555677888999999854 6889999987532233457899999999994 77888999999988899999999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh--------------------------------------------
Q 011184 138 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-------------------------------------------- 173 (491)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-------------------------------------------- 173 (491)
.+|.+.+. +......++.+++.+|..||+
T Consensus 95 ~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (263)
T 3tm0_A 95 VLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDP 167 (263)
T ss_dssp EEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSH
T ss_pred eehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCH
Confidence 99987642 111234678899999999998
Q ss_pred ---------------CCCcccccccccceeeCCCCCeEEccCCCcc
Q 011184 174 ---------------KGRALYHDLNAYRILFDEDGNPRLSTFGLMK 204 (491)
Q Consensus 174 ---------------~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 204 (491)
.. ++|+|++|.|||+++++.+.|+||+.+.
T Consensus 168 ~~l~~~l~~~~~~~~~~-l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 168 RELYDFLKTEKPEEELV-FSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHHCCCCCCEE-EECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhcCCCCCce-EECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 33 8999999999999876556799999764
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.43 E-value=1.2e-13 Score=146.49 Aligned_cols=109 Identities=12% Similarity=-0.092 Sum_probs=103.2
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 457 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (491)
.+.++..++.+|.+++..|+|++|++.|++|++++|+ ++.+++++|.+|.++|++++ ++.|++|++++|+++.+|+++
T Consensus 463 ~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~-~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~l 540 (681)
T 2pzi_A 463 VGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPG-ELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGL 540 (681)
T ss_dssp HCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHH
Confidence 4456789999999999999999999999999999999 88999999999999999999 999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 458 AAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 458 g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
|.+|..+|++++|+++|++|++++|++..++
T Consensus 541 g~~~~~~g~~~~A~~~~~~al~l~P~~~~a~ 571 (681)
T 2pzi_A 541 ARARSAEGDRVGAVRTLDEVPPTSRHFTTAR 571 (681)
T ss_dssp HHHHHHTTCHHHHHHHHHTSCTTSTTHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHhhcccCcccHHHH
Confidence 9999999999999999999999999987765
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.43 E-value=1.5e-12 Score=121.39 Aligned_cols=107 Identities=13% Similarity=0.001 Sum_probs=103.1
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 457 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (491)
.+..+..++.+|..++..|++++|++.|+++++++|+ +..++.++|.+|...|++++|+..|+++++++|.++.+|+++
T Consensus 39 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l 117 (275)
T 1xnf_A 39 DDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNR 117 (275)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHH
T ss_pred CchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHH
Confidence 3567889999999999999999999999999999999 889999999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHHHccccccc
Q 011184 458 AAALSAMGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 458 g~~~~~~~~~~~A~~~~~~al~l~~~~~ 485 (491)
|.+|..+|++++|+..|+++++++|++.
T Consensus 118 a~~~~~~g~~~~A~~~~~~a~~~~~~~~ 145 (275)
T 1xnf_A 118 GIALYYGGRDKLAQDDLLAFYQDDPNDP 145 (275)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHhccHHHHHHHHHHHHHhCCCCh
Confidence 9999999999999999999999999876
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.42 E-value=1.6e-12 Score=119.71 Aligned_cols=110 Identities=18% Similarity=0.179 Sum_probs=104.1
Q ss_pred hhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHH
Q 011184 377 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 456 (491)
Q Consensus 377 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 456 (491)
..+..+..+..+|..++..|+|++|++.|+++++.+|. +..++.++|.++..+|++++|+..++++++++|+++.+|+.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 212 (258)
T 3uq3_A 134 VNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIR 212 (258)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 35567889999999999999999999999999999999 88999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCChHHHHHHHHHHHccc------cccccc
Q 011184 457 QAAALSAMGMENEAQVALKEGTTLE------AKKNST 487 (491)
Q Consensus 457 ~g~~~~~~~~~~~A~~~~~~al~l~------~~~~~~ 487 (491)
+|.++..+|++++|++.|++|++++ |.+...
T Consensus 213 l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~ 249 (258)
T 3uq3_A 213 KATAQIAVKEYASALETLDAARTKDAEVNNGSSAREI 249 (258)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHhChhhcCCCchHHH
Confidence 9999999999999999999999999 766554
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.41 E-value=1.8e-12 Score=116.18 Aligned_cols=102 Identities=14% Similarity=0.088 Sum_probs=95.7
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHH
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 459 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (491)
..+..++.+|..++..|+|++|++.|++++ +| ++.+++++|.+|..+|++++|+..|+++++++|+++.+|+++|.
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~--~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~ 79 (213)
T 1hh8_A 4 VEAISLWNEGVLAADKKDWKGALDAFSAVQ--DP--HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGM 79 (213)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTSS--SC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHc--CC--ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 456788999999999999999999999996 44 46899999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHHHccccccc
Q 011184 460 ALSAMGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 460 ~~~~~~~~~~A~~~~~~al~l~~~~~ 485 (491)
+|..+|++++|++.|++|+++.|++.
T Consensus 80 ~~~~~~~~~~A~~~~~~al~~~~~~~ 105 (213)
T 1hh8_A 80 LYYQTEKYDLAIKDLKEALIQLRGNQ 105 (213)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTTTCS
T ss_pred HHHHcccHHHHHHHHHHHHHhCCCcc
Confidence 99999999999999999999998876
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.3e-12 Score=121.52 Aligned_cols=107 Identities=13% Similarity=0.007 Sum_probs=100.0
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc---HHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCc---hHH
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---HIA 453 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~---~~a 453 (491)
.++..++.+|..+++.|+|++|+..|+++++.+|+ + ..+++.+|.+|..+|++++|+..|+++++++|++ +.+
T Consensus 13 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a 91 (261)
T 3qky_A 13 SSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRT-HEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQA 91 (261)
T ss_dssp SSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSC-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHH
T ss_pred CCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHH
Confidence 45678999999999999999999999999999998 6 7899999999999999999999999999998854 679
Q ss_pred HHHHHHHHHH--------CCChHHHHHHHHHHHccccccccc
Q 011184 454 SYLQAAALSA--------MGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 454 ~~~~g~~~~~--------~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
++.+|.+++. +|++++|+..|+++++++|++..+
T Consensus 92 ~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~ 133 (261)
T 3qky_A 92 EYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELV 133 (261)
T ss_dssp HHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTH
T ss_pred HHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhH
Confidence 9999999999 999999999999999999987654
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.39 E-value=5.1e-13 Score=109.53 Aligned_cols=81 Identities=14% Similarity=-0.043 Sum_probs=75.4
Q ss_pred HHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccc
Q 011184 407 QFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 486 (491)
Q Consensus 407 ~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 486 (491)
++..+||+ .+..+.++|.+|.+.|+|++|+..|++||+++|.++.+|+++|.+|..+|++++|+++|++|++++|++..
T Consensus 4 r~a~inP~-~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 82 (126)
T 4gco_A 4 RLAYINPE-LAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIK 82 (126)
T ss_dssp ---CCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhH
Confidence 45678999 89999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred cc
Q 011184 487 TA 488 (491)
Q Consensus 487 ~~ 488 (491)
++
T Consensus 83 a~ 84 (126)
T 4gco_A 83 GY 84 (126)
T ss_dssp HH
T ss_pred HH
Confidence 65
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.4e-12 Score=104.77 Aligned_cols=87 Identities=16% Similarity=0.137 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHH
Q 011184 399 KDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGT 478 (491)
Q Consensus 399 ~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al 478 (491)
++|++.|+++++.+|+ ++.+++++|.+|...|++++|+..|+++++++|+++.+|+++|.+|..+|++++|+..|++|+
T Consensus 2 ~~a~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al 80 (115)
T 2kat_A 2 QAITERLEAMLAQGTD-NMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGL 80 (115)
T ss_dssp CCHHHHHHHHHTTTCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3689999999999999 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccc
Q 011184 479 TLEAKKNS 486 (491)
Q Consensus 479 ~l~~~~~~ 486 (491)
+++|++..
T Consensus 81 ~~~~~~~~ 88 (115)
T 2kat_A 81 AAAQSRGD 88 (115)
T ss_dssp HHHHHHTC
T ss_pred Hhcccccc
Confidence 99987654
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.8e-12 Score=126.50 Aligned_cols=108 Identities=14% Similarity=0.038 Sum_probs=102.3
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHH
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 459 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (491)
.++..++.+|..+++.|+|++|++.|+++++.+|+ +..++.++|.+|..+|++++|+..|+++++++|+++.+|+++|.
T Consensus 63 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 141 (365)
T 4eqf_A 63 KDWPGAFEEGLKRLKEGDLPVTILFMEAAILQDPG-DAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAV 141 (365)
T ss_dssp TTCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 34567999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 460 ALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 460 ~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
+|..+|++++|++.|+++++++|++..++
T Consensus 142 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 170 (365)
T 4eqf_A 142 SYTNTSHQQDACEALKNWIKQNPKYKYLV 170 (365)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCHHHHCC-
T ss_pred HHHccccHHHHHHHHHHHHHhCccchHHH
Confidence 99999999999999999999999877654
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.38 E-value=4.5e-12 Score=103.75 Aligned_cols=105 Identities=18% Similarity=0.179 Sum_probs=97.6
Q ss_pred HHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHH
Q 011184 379 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 458 (491)
Q Consensus 379 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 458 (491)
+.+...+...|..+...|++++|+..|+++++.+|. ...++.++|.++...|++++|+..+++++++.|.+..+++.+|
T Consensus 32 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la 110 (136)
T 2fo7_A 32 PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLG 110 (136)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 345677888999999999999999999999999998 8888999999999999999999999999999999999999999
Q ss_pred HHHHHCCChHHHHHHHHHHHcccccc
Q 011184 459 AALSAMGMENEAQVALKEGTTLEAKK 484 (491)
Q Consensus 459 ~~~~~~~~~~~A~~~~~~al~l~~~~ 484 (491)
.++..+|++++|+..|+++++++|.+
T Consensus 111 ~~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 111 NAYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHccHHHHHHHHHHHHccCCCC
Confidence 99999999999999999999998863
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.37 E-value=2.5e-12 Score=116.76 Aligned_cols=108 Identities=9% Similarity=-0.033 Sum_probs=98.1
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc--HHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchH---HHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS--PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI---ASY 455 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~--~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~---a~~ 455 (491)
++..++.+|..+++.|+|++|+..|+++++..|+.. ..+++++|.+|..+|++++|+..|+++++++|++.. +++
T Consensus 3 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~ 82 (225)
T 2yhc_A 3 PPNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMY 82 (225)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHH
Confidence 356889999999999999999999999999999722 468999999999999999999999999999999875 899
Q ss_pred HHHHHHHH------------------CCChHHHHHHHHHHHcccccccccc
Q 011184 456 LQAAALSA------------------MGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 456 ~~g~~~~~------------------~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
.+|.++.. +|++++|+..|+++++.+|++..++
T Consensus 83 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~ 133 (225)
T 2yhc_A 83 MRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTT 133 (225)
T ss_dssp HHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHH
T ss_pred HHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHH
Confidence 99999986 6799999999999999999987653
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=1.9e-12 Score=134.54 Aligned_cols=105 Identities=10% Similarity=-0.007 Sum_probs=57.4
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHH
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 459 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (491)
.++..+..+|..++..|++++|++.|+++++++|+ +..+++++|.+|..+|++++|++.|+++++++|++..+++++|.
T Consensus 55 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 133 (568)
T 2vsy_A 55 GHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPE-HPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLN 133 (568)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 33445555555555555555555555555555555 45555555555555555555555555555555555555555555
Q ss_pred HHHHC---CChHHHHHHHHHHHccccccc
Q 011184 460 ALSAM---GMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 460 ~~~~~---~~~~~A~~~~~~al~l~~~~~ 485 (491)
++..+ |++++|++.|+++++++|++.
T Consensus 134 ~~~~~~~~g~~~~A~~~~~~al~~~p~~~ 162 (568)
T 2vsy_A 134 WRRRLCDWRALDVLSAQVRAAVAQGVGAV 162 (568)
T ss_dssp HHHHTTCCTTHHHHHHHHHHHHHHTCCCS
T ss_pred HHHHhhccccHHHHHHHHHHHHhcCCccc
Confidence 55555 555555555555555555443
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.36 E-value=7.4e-12 Score=102.43 Aligned_cols=104 Identities=18% Similarity=0.182 Sum_probs=98.5
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHH
Q 011184 383 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 462 (491)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 462 (491)
..++..|..++..|++++|+..|.++++.+|. +...+..+|.++...|++++|+..++++++++|.+..+++.+|.++.
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYY 80 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCc-chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 46788999999999999999999999999999 88899999999999999999999999999999999999999999999
Q ss_pred HCCChHHHHHHHHHHHccccccccc
Q 011184 463 AMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 463 ~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
..|++++|++.|+++++++|.+..+
T Consensus 81 ~~~~~~~A~~~~~~~~~~~~~~~~~ 105 (136)
T 2fo7_A 81 KQGDYDEAIEYYQKALELDPRSAEA 105 (136)
T ss_dssp TTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HhcCHHHHHHHHHHHHHhCCCChHH
Confidence 9999999999999999999887543
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.2e-12 Score=132.91 Aligned_cols=106 Identities=12% Similarity=0.054 Sum_probs=100.6
Q ss_pred HHhHHHHHHHHHHh---------cCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhc--------CChHHHHHHHHHHH
Q 011184 382 TLNSKKKGDVAFRQ---------KDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMS--------DMPQDALNDAMQAQ 444 (491)
Q Consensus 382 ~~~~~~~g~~~~~~---------~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~--------~~~~~A~~~~~~al 444 (491)
+..+..+|..+... |+|++|++.|++|++++|+ +..+|+++|.+|..+ |++++|+..|++|+
T Consensus 170 ~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al 248 (474)
T 4abn_A 170 KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVL-DGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAE 248 (474)
T ss_dssp HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Confidence 58899999999999 9999999999999999999 889999999999999 99999999999999
Q ss_pred hhCC---CchHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 445 IISP---IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 445 ~l~p---~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
+++| +++.+|+++|.+|..+|+|++|+++|++|++++|++..++
T Consensus 249 ~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~ 295 (474)
T 4abn_A 249 KVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQ 295 (474)
T ss_dssp HHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999 9999999999999999999999999999999999987654
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.35 E-value=8.7e-12 Score=108.30 Aligned_cols=108 Identities=14% Similarity=0.047 Sum_probs=102.3
Q ss_pred HHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHH
Q 011184 379 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 458 (491)
Q Consensus 379 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 458 (491)
+.++..+...|..++..|++++|++.|+++++.+|. +..++..+|.++...|++++|+..++++++++|.++.+++.+|
T Consensus 73 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la 151 (186)
T 3as5_A 73 PDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPI-NFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIA 151 (186)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcH-hHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHH
Confidence 345678899999999999999999999999999999 8899999999999999999999999999999999999999999
Q ss_pred HHHHHCCChHHHHHHHHHHHccccccccc
Q 011184 459 AALSAMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 459 ~~~~~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
.++..+|++++|++.|+++++++|++...
T Consensus 152 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 180 (186)
T 3as5_A 152 FSYEQMGRHEEALPHFKKANELDEGASVE 180 (186)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHCCCGG
T ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCchhh
Confidence 99999999999999999999999987754
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.35 E-value=4.9e-12 Score=122.27 Aligned_cols=106 Identities=17% Similarity=0.200 Sum_probs=101.5
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 460 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (491)
++..++.+|..++..|+|++|+..|+++++.+|+ ++.++.++|.++..+|++++|+..|+++++++|++..+|+.+|.+
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 80 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHL 80 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHH
Confidence 5678999999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHHHcccc---ccccc
Q 011184 461 LSAMGMENEAQVALKEGTTLEA---KKNST 487 (491)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~l~~---~~~~~ 487 (491)
+..+|++++|+..|+++++++| ++..+
T Consensus 81 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 110 (359)
T 3ieg_A 81 LLKQGKLDEAEDDFKKVLKSNPSEQEEKEA 110 (359)
T ss_dssp HHHHTCHHHHHHHHHHHHTSCCCHHHHHHH
T ss_pred HHHcCChHHHHHHHHHHHhcCCcccChHHH
Confidence 9999999999999999999999 65544
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.35 E-value=7.4e-12 Score=115.18 Aligned_cols=106 Identities=12% Similarity=0.009 Sum_probs=78.5
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHh--hCCCchHHHHHH
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI--ISPIWHIASYLQ 457 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~--l~p~~~~a~~~~ 457 (491)
..+..+...|..++..|++++|++.|+++++.+|. +..++.++|.+|...|++++|++.++++++ .+|.+..+++.+
T Consensus 69 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~l 147 (252)
T 2ho1_A 69 SSADAHAALAVVFQTEMEPKLADEEYRKALASDSR-NARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENL 147 (252)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHH
Confidence 44566777777777777777777777777777777 667777777777777777777777777777 677777777777
Q ss_pred HHHHHHCCChHHHHHHHHHHHcccccccc
Q 011184 458 AAALSAMGMENEAQVALKEGTTLEAKKNS 486 (491)
Q Consensus 458 g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 486 (491)
|.++..+|++++|++.|+++++++|.+..
T Consensus 148 a~~~~~~g~~~~A~~~~~~~~~~~~~~~~ 176 (252)
T 2ho1_A 148 GLVSLQMKKPAQAKEYFEKSLRLNRNQPS 176 (252)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCSCCHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCcccHH
Confidence 77777777777777777777777776543
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.34 E-value=5.3e-12 Score=123.17 Aligned_cols=104 Identities=14% Similarity=0.160 Sum_probs=100.0
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 460 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (491)
++..+..+|..+...|++++|++.|+++++++|+ ++.+|.++|.+|..+|++++|+..|+++++++|+++.+|+++|.+
T Consensus 212 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 290 (365)
T 4eqf_A 212 DPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPE-DYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGIS 290 (365)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHH
Confidence 5678999999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHHHccccccc
Q 011184 461 LSAMGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~l~~~~~ 485 (491)
|..+|++++|+..|++|++++|+..
T Consensus 291 ~~~~g~~~~A~~~~~~al~~~~~~~ 315 (365)
T 4eqf_A 291 CINLGAYREAVSNFLTALSLQRKSR 315 (365)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHCC-
T ss_pred HHHCCCHHHHHHHHHHHHHhCcccC
Confidence 9999999999999999999999853
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=8.5e-13 Score=111.53 Aligned_cols=89 Identities=10% Similarity=-0.070 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHH
Q 011184 399 KDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGT 478 (491)
Q Consensus 399 ~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al 478 (491)
-.+-..|++++.++|+ +...++++|.++...|++++|+..|+++++++|.++.+|+++|.++..+|+|++|+++|++|+
T Consensus 4 ~~~~~~~~~al~~~p~-~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 82 (148)
T 2vgx_A 4 GSGGGTIAMLNEISSD-TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGA 82 (148)
T ss_dssp --CCCSHHHHTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cchhhhHHHHHcCCHh-hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3444578999999999 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccc
Q 011184 479 TLEAKKNSTA 488 (491)
Q Consensus 479 ~l~~~~~~~~ 488 (491)
+++|++..++
T Consensus 83 ~l~p~~~~~~ 92 (148)
T 2vgx_A 83 VMDIXEPRFP 92 (148)
T ss_dssp HHSTTCTHHH
T ss_pred hcCCCCchHH
Confidence 9999987654
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.34 E-value=6.9e-12 Score=114.44 Aligned_cols=102 Identities=14% Similarity=0.137 Sum_probs=54.1
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHH
Q 011184 382 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 461 (491)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (491)
+..+..+|..++..|++++|++.|+++++.+|+ ...++..+|.++..+|++++|+..++++++++|.+..+++.+|.++
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 135 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALELDSS-AATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVL 135 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc-chHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 444555555555555555555555555555554 4455555555555555555555555555555555555555555555
Q ss_pred HHCCChHHHHHHHHHHHcccccc
Q 011184 462 SAMGMENEAQVALKEGTTLEAKK 484 (491)
Q Consensus 462 ~~~~~~~~A~~~~~~al~l~~~~ 484 (491)
..+|++++|+..|+++++++|++
T Consensus 136 ~~~~~~~~A~~~~~~~~~~~~~~ 158 (243)
T 2q7f_A 136 VKLEQPKLALPYLQRAVELNEND 158 (243)
T ss_dssp HHTSCHHHHHHHHHHHHHHCTTC
T ss_pred HHhccHHHHHHHHHHHHHhCCcc
Confidence 55555555555555555555443
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.33 E-value=2.4e-12 Score=100.29 Aligned_cols=94 Identities=15% Similarity=0.090 Sum_probs=87.4
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHH-HHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHH
Q 011184 385 SKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT-VYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 463 (491)
Q Consensus 385 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~-~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 463 (491)
.+.+|..+++.|+|++|++.|+++++.+|+ +.. +++++|.+|..+|++++|+..|+++++++|++..++++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~------- 74 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPV-GKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR------- 74 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSS-THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH-------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH-------
Confidence 467899999999999999999999999999 888 99999999999999999999999999999999999866
Q ss_pred CCChHHHHHHHHHHHccccccccc
Q 011184 464 MGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 464 ~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
+.+.+|+..|+++++++|.+...
T Consensus 75 -~~~~~a~~~~~~~~~~~p~~~~~ 97 (99)
T 2kc7_A 75 -KMVMDILNFYNKDMYNQLEHHHH 97 (99)
T ss_dssp -HHHHHHHHHHCCTTHHHHCCSSC
T ss_pred -HHHHHHHHHHHHHhccCcccccC
Confidence 77899999999999999987654
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.33 E-value=1.4e-11 Score=107.05 Aligned_cols=107 Identities=14% Similarity=0.085 Sum_probs=101.1
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHH
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 459 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (491)
.++..+...|..++..|++++|++.|+++++.+|+ +..++.++|.++...|++++|+..++++++++|.++.+++.+|.
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~ 118 (186)
T 3as5_A 40 FDVDVALHLGIAYVKTGAVDRGTELLERSLADAPD-NVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGV 118 (186)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHH
Confidence 34678899999999999999999999999999999 88999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHHHccccccccc
Q 011184 460 ALSAMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 460 ~~~~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
++..+|++++|++.|+++++++|.+..+
T Consensus 119 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 146 (186)
T 3as5_A 119 ALDNLGRFDEAIDSFKIALGLRPNEGKV 146 (186)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHcCcHHHHHHHHHHHHhcCccchHH
Confidence 9999999999999999999999887654
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=8.3e-12 Score=117.90 Aligned_cols=107 Identities=11% Similarity=-0.073 Sum_probs=80.3
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 457 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (491)
.+.++..++.+|..+.+.|++++|+..|++++..+|+ ......+.+..+...++.++|+..++++++++|+++.+++++
T Consensus 147 ~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~-~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~l 225 (287)
T 3qou_A 147 SNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQD-TRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQL 225 (287)
T ss_dssp TTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCS-HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcc-hHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHH
Confidence 3444555666666666666666666666666666664 445555555555555666667777888899999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHHHccccccc
Q 011184 458 AAALSAMGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 458 g~~~~~~~~~~~A~~~~~~al~l~~~~~ 485 (491)
|.+|...|++++|++.|+++++++|++.
T Consensus 226 a~~l~~~g~~~~A~~~l~~~l~~~p~~~ 253 (287)
T 3qou_A 226 ALQLHQVGRNEEALELLFGHLRXDLTAA 253 (287)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTGG
T ss_pred HHHHHHcccHHHHHHHHHHHHhcccccc
Confidence 9999999999999999999999999983
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.32 E-value=2.2e-12 Score=130.87 Aligned_cols=107 Identities=9% Similarity=-0.037 Sum_probs=102.8
Q ss_pred HHHHhHHHHHHHHHHhcCH-HHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHH
Q 011184 380 QETLNSKKKGDVAFRQKDL-KDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 458 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~-~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 458 (491)
..+..++.+|..++..|+| ++|++.|++|++++|+ +..+|+++|.+|..+|++++|+..|++|++++|+ ..+|+++|
T Consensus 100 ~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg 177 (474)
T 4abn_A 100 VEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPE-LVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLS 177 (474)
T ss_dssp CCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHH
Confidence 4678899999999999999 9999999999999999 8999999999999999999999999999999999 79999999
Q ss_pred HHHHHC---------CChHHHHHHHHHHHcccccccccc
Q 011184 459 AALSAM---------GMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 459 ~~~~~~---------~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
.+|..+ |++++|++.|++|++++|++..+|
T Consensus 178 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 216 (474)
T 4abn_A 178 MVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSW 216 (474)
T ss_dssp HHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999 999999999999999999988765
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.32 E-value=7.9e-12 Score=114.06 Aligned_cols=108 Identities=12% Similarity=0.061 Sum_probs=102.5
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHH
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 459 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (491)
.+...+...|..++..|++++|+..|+++++.+|+ +..++..+|.++...|++++|+..++++++++|+++.+++.+|.
T Consensus 123 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~ 201 (243)
T 2q7f_A 123 ENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNEN-DTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGV 201 (243)
T ss_dssp CSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 45667899999999999999999999999999999 88999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 460 ALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 460 ~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
++..+|++++|++.|+++++++|++..++
T Consensus 202 ~~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 230 (243)
T 2q7f_A 202 TYAYKENREKALEMLDKAIDIQPDHMLAL 230 (243)
T ss_dssp HHHHTTCTTHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHccCHHHHHHHHHHHHccCcchHHHH
Confidence 99999999999999999999999987654
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.32 E-value=1.1e-11 Score=124.41 Aligned_cols=109 Identities=18% Similarity=0.203 Sum_probs=103.1
Q ss_pred hhhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHH
Q 011184 376 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 455 (491)
Q Consensus 376 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 455 (491)
...+.++..++.+|..+++.|+|++|+..|+++++.+|+ +..+++++|.+|..+|++++|+..|+++++++|+++.+++
T Consensus 20 ~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 98 (450)
T 2y4t_A 20 FQSMADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARL 98 (450)
T ss_dssp ---CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHH
Confidence 345678899999999999999999999999999999999 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCChHHHHHHHHHHHccccccc
Q 011184 456 LQAAALSAMGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 456 ~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 485 (491)
.+|.+|..+|++++|++.|+++++++|++.
T Consensus 99 ~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~ 128 (450)
T 2y4t_A 99 QRGHLLLKQGKLDEAEDDFKKVLKSNPSEN 128 (450)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTSCCCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCCCh
Confidence 999999999999999999999999999876
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.31 E-value=1.1e-11 Score=120.62 Aligned_cols=106 Identities=9% Similarity=0.054 Sum_probs=101.9
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHH
Q 011184 382 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 461 (491)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (491)
+..++.+|..+++.|+|++|+..|+++++.+|+ +..++.++|.+|..+|++++|+..|+++++++|+++.+++.+|.++
T Consensus 64 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~ 142 (368)
T 1fch_A 64 HPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSF 142 (368)
T ss_dssp CSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 557889999999999999999999999999999 8899999999999999999999999999999999999999999999
Q ss_pred HHCCChHHHHHHHHHHHcccccccccc
Q 011184 462 SAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 462 ~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
..+|++++|++.|+++++++|++...+
T Consensus 143 ~~~g~~~~A~~~~~~~~~~~~~~~~~~ 169 (368)
T 1fch_A 143 TNESLQRQACEILRDWLRYTPAYAHLV 169 (368)
T ss_dssp HHTTCHHHHHHHHHHHHHTSTTTGGGC
T ss_pred HHcCCHHHHHHHHHHHHHhCcCcHHHH
Confidence 999999999999999999999987765
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.31 E-value=1.6e-11 Score=125.13 Aligned_cols=107 Identities=21% Similarity=0.270 Sum_probs=101.0
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 457 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (491)
....+..++.+|..+++.|+|++|+..|+++++.+|+ +.++.++|.++..+|++++|+..++++++++|++..+|+.+
T Consensus 2 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 79 (514)
T 2gw1_A 2 KDKYALALKDKGNQFFRNKKYDDAIKYYNWALELKED--PVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRR 79 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc--HHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHH
Confidence 3467889999999999999999999999999999995 78899999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHHHcccccccc
Q 011184 458 AAALSAMGMENEAQVALKEGTTLEAKKNS 486 (491)
Q Consensus 458 g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 486 (491)
|.++..+|++++|+..|+++++++|.+..
T Consensus 80 ~~~~~~~g~~~~A~~~~~~~~~~~~~~~~ 108 (514)
T 2gw1_A 80 ASANEGLGKFADAMFDLSVLSLNGDFNDA 108 (514)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHSSSCCGG
T ss_pred HHHHHHHhhHHHHHHHHHHHHhcCCCccc
Confidence 99999999999999999999999986543
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.31 E-value=1.2e-11 Score=113.67 Aligned_cols=106 Identities=15% Similarity=0.059 Sum_probs=96.4
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHHh--------------------------cCCCCcHHHHhhHHHHHHhcCChHH
Q 011184 382 TLNSKKKGDVAFRQKDLKDAIECYTQFID--------------------------AGTMVSPTVYARRSLCYLMSDMPQD 435 (491)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~--------------------------~~p~~~~~~~~~~~~~~~~~~~~~~ 435 (491)
+..+..+|..+...|++++|++.|+++++ .+|. ...++.++|.++...|++++
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 157 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPE-KAEEARLEGKEYFTKSDWPN 157 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcc-hHHHHHHHHHHHHHhcCHHH
Confidence 67778888888888888888888888887 6777 77889999999999999999
Q ss_pred HHHHHHHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 436 ALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 436 A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
|+..|+++++++|.++.+|+++|.++..+|++++|+..|+++++++|++..++
T Consensus 158 A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 210 (258)
T 3uq3_A 158 AVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAY 210 (258)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987654
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=99.31 E-value=4.5e-12 Score=99.21 Aligned_cols=76 Identities=12% Similarity=0.048 Sum_probs=65.0
Q ss_pred cCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHccccccccc
Q 011184 411 AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 411 ~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
.+|+ ++.+++++|.+|..+|++++|+..|+++++++|+++.+|+++|.+|..+|++++|++.|++|++++|++...
T Consensus 2 ~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~ 77 (100)
T 3ma5_A 2 EDPE-DPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQ 77 (100)
T ss_dssp ---C-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCH
T ss_pred CCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCch
Confidence 4677 888889999999999999999999999999999999999999999999999999999999999988876554
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.31 E-value=8.1e-12 Score=122.99 Aligned_cols=109 Identities=13% Similarity=0.045 Sum_probs=100.4
Q ss_pred HHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHH
Q 011184 379 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 458 (491)
Q Consensus 379 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 458 (491)
+..+..+..+|..+.+.|++++|++.|+++++++|+ +..++.++|.++...|++++|+..|+++++++|+++.+|+++|
T Consensus 268 p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 346 (388)
T 1w3b_A 268 PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLA 346 (388)
T ss_dssp SSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 345678899999999999999999999999999999 8889999999999999999999999999999999999999999
Q ss_pred HHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 459 AALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 459 ~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
.+|..+|++++|+..|++|++++|++..++
T Consensus 347 ~~~~~~g~~~~A~~~~~~a~~~~p~~~~a~ 376 (388)
T 1w3b_A 347 SVLQQQGKLQEALMHYKEAIRISPTFADAY 376 (388)
T ss_dssp HHHHTTTCCHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhhCCCCHHHH
Confidence 999999999999999999999999887654
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.31 E-value=2.3e-11 Score=92.69 Aligned_cols=85 Identities=16% Similarity=0.161 Sum_probs=80.2
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHH
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 459 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (491)
..+..++..|..++..|+|++|+..|+++++.+|+ +..++.++|.++...|++++|+..++++++++|++..+++++|.
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 85 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGN 85 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 45678899999999999999999999999999999 88999999999999999999999999999999999999999999
Q ss_pred HHHHCC
Q 011184 460 ALSAMG 465 (491)
Q Consensus 460 ~~~~~~ 465 (491)
++..+|
T Consensus 86 ~~~~~g 91 (91)
T 1na3_A 86 AKQKQG 91 (91)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 998765
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.30 E-value=1.1e-11 Score=120.72 Aligned_cols=103 Identities=13% Similarity=0.158 Sum_probs=100.2
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 460 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (491)
.+..+..+|..+...|++++|+..|+++++++|+ +..++.++|.++..+|++++|+..|+++++++|+++.+|+++|.+
T Consensus 216 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~ 294 (368)
T 1fch_A 216 DPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGIS 294 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 5778999999999999999999999999999999 889999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHHHcccccc
Q 011184 461 LSAMGMENEAQVALKEGTTLEAKK 484 (491)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~l~~~~ 484 (491)
|..+|++++|+..|++|++++|++
T Consensus 295 ~~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 295 CINLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHTC
T ss_pred HHHCCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999987
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.30 E-value=8e-12 Score=123.04 Aligned_cols=105 Identities=12% Similarity=0.013 Sum_probs=61.5
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHH
Q 011184 382 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 461 (491)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (491)
+..+..+|..+.+.|++++|++.|+++++.+|+ ...++.++|.++..+|++++|+..|+++++++|+++.+|+++|.++
T Consensus 101 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 179 (388)
T 1w3b_A 101 IDGYINLAAALVAAGDMEGAVQAYVSALQYNPD-LYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVF 179 (388)
T ss_dssp HHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTT-CTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 334555555555555555555555555555555 5555555555555566666666666666666666666666666666
Q ss_pred HHCCChHHHHHHHHHHHccccccccc
Q 011184 462 SAMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 462 ~~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
...|++++|+..|++|++++|++..+
T Consensus 180 ~~~g~~~~A~~~~~~al~~~p~~~~~ 205 (388)
T 1w3b_A 180 NAQGEIWLAIHHFEKAVTLDPNFLDA 205 (388)
T ss_dssp HTTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHcCCHHHHHHHHHHHHhcCCCcHHH
Confidence 66666666666666666666655443
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.30 E-value=6e-12 Score=117.16 Aligned_cols=113 Identities=5% Similarity=-0.095 Sum_probs=100.1
Q ss_pred hhhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcC--CCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHH
Q 011184 376 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAG--TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIA 453 (491)
Q Consensus 376 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a 453 (491)
...+.++..+..+|..++..|+|++|++.|+++++.. |.....+|.++|.++..+|++++|+..|+++++++|.++.+
T Consensus 31 ~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 110 (272)
T 3u4t_A 31 AKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDM 110 (272)
T ss_dssp HTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHH
T ss_pred HhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHH
Confidence 3345667799999999999999999999999999932 22224568999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 454 SYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 454 ~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
|+++|.++..+|++++|++.|+++++++|.+..++
T Consensus 111 ~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 145 (272)
T 3u4t_A 111 YGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVF 145 (272)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHH
Confidence 99999999999999999999999999999887654
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.30 E-value=1.5e-11 Score=114.19 Aligned_cols=127 Identities=13% Similarity=0.077 Sum_probs=97.0
Q ss_pred CCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCC--cceEEeEeecCCeeEEEEecCCCCCHHHH
Q 011184 66 GEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNR--LTNLLGCCCEGDERLLVAEYMPNETLAKH 143 (491)
Q Consensus 66 G~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~~~~~~~~~~~~~lv~e~~~~gsL~~~ 143 (491)
+.|..+.||+....+|..+++|..... ....+.+|+.+++.+.+.+ +++++++...++..++||||++|.+|.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~-- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL-- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence 456669999998777888999997653 2356889999999996444 567899888878889999999998884
Q ss_pred hcccCCCCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------------------------
Q 011184 144 LFHWETHPMKWAMRLRVVLHLAQALEYCTSKG------------------------------------------------ 175 (491)
Q Consensus 144 l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~------------------------------------------------ 175 (491)
.. . .. ...++.+++..|..||+..
T Consensus 104 ~~---~--~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 175 (264)
T 1nd4_A 104 SS---H--LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLK 175 (264)
T ss_dssp TS---C--CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHH
T ss_pred cC---c--CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHH
Confidence 21 1 12 2255677777788887642
Q ss_pred ---------CcccccccccceeeCCCCCeEEccCCCccc
Q 011184 176 ---------RALYHDLNAYRILFDEDGNPRLSTFGLMKN 205 (491)
Q Consensus 176 ---------~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 205 (491)
.++|+|++|.|||+++++.+.|+||+.+..
T Consensus 176 ~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 176 ARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 189999999999998776677999998653
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.30 E-value=2.2e-11 Score=109.39 Aligned_cols=109 Identities=14% Similarity=0.053 Sum_probs=95.1
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhc-CChHHHHHHHHHHHh--hCCCchHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMS-DMPQDALNDAMQAQI--ISPIWHIAS 454 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~-~~~~~A~~~~~~al~--l~p~~~~a~ 454 (491)
.+.++..+...|..+...|++++|++.|+++++.+|+ +..++.++|.++... |++++|+..++++++ .+|.+..++
T Consensus 38 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 116 (225)
T 2vq2_A 38 DPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPD-SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIAN 116 (225)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHH
T ss_pred CccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHH
Confidence 3445778888999999999999999999999999998 788888999999999 999999999999998 667778899
Q ss_pred HHHHHHHHHCCChHHHHHHHHHHHccccccccc
Q 011184 455 YLQAAALSAMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 455 ~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
+.+|.++..+|++++|+..|+++++++|.+..+
T Consensus 117 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 149 (225)
T 2vq2_A 117 LNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPA 149 (225)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchH
Confidence 999999999999999999999999988887554
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.29 E-value=1.3e-11 Score=114.66 Aligned_cols=104 Identities=14% Similarity=0.114 Sum_probs=96.8
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC--cHHHHhhHHHHHHh--------cCChHHHHHHHHHHHhhCCCch
Q 011184 382 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--SPTVYARRSLCYLM--------SDMPQDALNDAMQAQIISPIWH 451 (491)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~~~~~~~~~--------~~~~~~A~~~~~~al~l~p~~~ 451 (491)
+..++.+|.++++.|+|++|+..|++++++.|++ ...+++++|.++.. +|++++|+..|+++++++|++.
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~ 131 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE 131 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch
Confidence 7889999999999999999999999999998852 46789999999999 9999999999999999999987
Q ss_pred HHH-----------------HHHHHHHHHCCChHHHHHHHHHHHccccccc
Q 011184 452 IAS-----------------YLQAAALSAMGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 452 ~a~-----------------~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 485 (491)
.++ +.+|.+|..+|+|++|+..|+++++.+|++.
T Consensus 132 ~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~ 182 (261)
T 3qky_A 132 LVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTP 182 (261)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTST
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCc
Confidence 666 9999999999999999999999999999854
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.29 E-value=1.2e-11 Score=114.97 Aligned_cols=102 Identities=12% Similarity=0.001 Sum_probs=65.1
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHH
Q 011184 384 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 463 (491)
Q Consensus 384 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 463 (491)
.+..+|..+...|++++|++.|+++++++|+ +..++.++|.+|..+|++++|+..|+++++++|.++.+|+++|...+.
T Consensus 76 ~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 154 (272)
T 3u4t_A 76 DFEYYGKILMKKGQDSLAIQQYQAAVDRDTT-RLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYY 154 (272)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHH
Confidence 4566666666666666666666666666666 556666666666666666666666666666666666666666633333
Q ss_pred CCChHHHHHHHHHHHcccccccc
Q 011184 464 MGMENEAQVALKEGTTLEAKKNS 486 (491)
Q Consensus 464 ~~~~~~A~~~~~~al~l~~~~~~ 486 (491)
.+++++|++.|+++++++|++..
T Consensus 155 ~~~~~~A~~~~~~a~~~~p~~~~ 177 (272)
T 3u4t_A 155 NKEYVKADSSFVKVLELKPNIYI 177 (272)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHH
T ss_pred HHHHHHHHHHHHHHHHhCccchH
Confidence 44666666666666666666543
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.29 E-value=1.1e-11 Score=117.24 Aligned_cols=108 Identities=12% Similarity=0.007 Sum_probs=91.6
Q ss_pred HHHHhHHHHHHHHHHh-cCHHHHHHHHHHHHhcCCCCc-----HHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchH-
Q 011184 380 QETLNSKKKGDVAFRQ-KDLKDAIECYTQFIDAGTMVS-----PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI- 452 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~-~~~~~A~~~~~~al~~~p~~~-----~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~- 452 (491)
..+..+.+.|.++... |++++|++.|++|+++.|.+. ..++.++|.+|..+|++++|+..|++++++.|++..
T Consensus 115 ~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 194 (292)
T 1qqe_A 115 RGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLS 194 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTT
T ss_pred HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcc
Confidence 3467889999999996 999999999999999987521 467899999999999999999999999999998653
Q ss_pred ------HHHHHHHHHHHCCChHHHHHHHHHHHccccccccc
Q 011184 453 ------ASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 453 ------a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
+|+++|.++..+|++++|+.+|+++++++|+...+
T Consensus 195 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~ 235 (292)
T 1qqe_A 195 QWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADS 235 (292)
T ss_dssp GGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC-------
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCc
Confidence 68999999999999999999999999999987653
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.29 E-value=9.6e-12 Score=127.73 Aligned_cols=109 Identities=21% Similarity=0.306 Sum_probs=96.0
Q ss_pred hhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHH
Q 011184 377 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 456 (491)
Q Consensus 377 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 456 (491)
+....+..++.+|..+++.|+|++|++.|+++++.+|+ ++.++.++|.+|..+|++++|+..|+++++++|+++.+++.
T Consensus 20 ~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 98 (537)
T 3fp2_A 20 QRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLR 98 (537)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHH
Confidence 34467899999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCChHHHHHHHHHHHccccccccc
Q 011184 457 QAAALSAMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 457 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
+|.++..+|++++|+..|+ ++.++|+....
T Consensus 99 la~~~~~~g~~~~A~~~~~-~~~~~~~~~~~ 128 (537)
T 3fp2_A 99 RASANESLGNFTDAMFDLS-VLSLNGDFDGA 128 (537)
T ss_dssp HHHHHHHHTCHHHHHHHHH-HHC--------
T ss_pred HHHHHHHcCCHHHHHHHHH-HHhcCCCCChH
Confidence 9999999999999999996 89999887654
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.27 E-value=5e-13 Score=116.36 Aligned_cols=101 Identities=11% Similarity=0.031 Sum_probs=89.2
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHH-HHHCC
Q 011184 387 KKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA-LSAMG 465 (491)
Q Consensus 387 ~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~-~~~~~ 465 (491)
..+..+...|+|++|+..|+++++.+|+ +..++..+|.+|...|++++|+..|+++++++|+++.+++++|.+ +...|
T Consensus 15 ~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~ 93 (177)
T 2e2e_A 15 DPLHQFASQQNPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQAS 93 (177)
T ss_dssp TTTCCCC-----CCCCHHHHHHHHHCCS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTT
T ss_pred hhhhhhhhccCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcC
Confidence 3445567889999999999999999999 889999999999999999999999999999999999999999999 88999
Q ss_pred Ch--HHHHHHHHHHHcccccccccc
Q 011184 466 ME--NEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 466 ~~--~~A~~~~~~al~l~~~~~~~~ 488 (491)
++ ++|+..|+++++++|++..++
T Consensus 94 ~~~~~~A~~~~~~al~~~p~~~~~~ 118 (177)
T 2e2e_A 94 QHMTAQTRAMIDKALALDSNEITAL 118 (177)
T ss_dssp TCCCHHHHHHHHHHHHHCTTCHHHH
T ss_pred CcchHHHHHHHHHHHHhCCCcHHHH
Confidence 99 999999999999999987654
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=2.4e-11 Score=126.28 Aligned_cols=110 Identities=15% Similarity=0.023 Sum_probs=103.4
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 457 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (491)
.+.++..+..+|..+++.|+|++|++.|++|++++|+ +..++.++|.+|..+|++++|++.|+++++++|+++.+|+++
T Consensus 19 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 97 (568)
T 2vsy_A 19 RPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPG-HPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWL 97 (568)
T ss_dssp --CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 4455778999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 458 AAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 458 g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
|.+|..+|++++|++.|++|++++|++..++
T Consensus 98 a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 128 (568)
T 2vsy_A 98 GHALEDAGQAEAAAAAYTRAHQLLPEEPYIT 128 (568)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999999999999999999999887653
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.4e-11 Score=117.82 Aligned_cols=110 Identities=15% Similarity=0.061 Sum_probs=101.4
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcC---------CCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCC
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAG---------TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISP 448 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~---------p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p 448 (491)
.+.++..+...|..++..|++++|+..|+++++.. |. ...++.++|.+|..+|++++|+..++++++++|
T Consensus 189 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 267 (330)
T 3hym_B 189 APEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDK-WEPLLNNLGHVCRKLKKYAEALDYHRQALVLIP 267 (330)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTT-CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred CCCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCc
Confidence 44567889999999999999999999999999886 55 668899999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 449 IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 449 ~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
+++.+|+++|.++..+|++++|++.|+++++++|++..++
T Consensus 268 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 307 (330)
T 3hym_B 268 QNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSV 307 (330)
T ss_dssp TCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHHH
T ss_pred cchHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCchHHH
Confidence 9999999999999999999999999999999999987654
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.26 E-value=5.5e-11 Score=114.81 Aligned_cols=107 Identities=14% Similarity=0.107 Sum_probs=97.9
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcH----HHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP----TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 456 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 456 (491)
........|..+++.|++++|++.|+++++.+|+ +. .++..+|.++..+|++++|+..|+++++++|+++.+|+.
T Consensus 233 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 311 (359)
T 3ieg_A 233 KLNKLIESAEELIRDGRYTDATSKYESVMKTEPS-VAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKD 311 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHHH
Confidence 3445567799999999999999999999999999 65 346679999999999999999999999999999999999
Q ss_pred HHHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 457 QAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 457 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
+|.++..+|++++|++.|++|++++|++..++
T Consensus 312 ~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~ 343 (359)
T 3ieg_A 312 RAEAYLIEEMYDEAIQDYEAAQEHNENDQQIR 343 (359)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcCCCChHHH
Confidence 99999999999999999999999999987654
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.26 E-value=2.9e-11 Score=116.84 Aligned_cols=100 Identities=11% Similarity=-0.007 Sum_probs=93.8
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHH
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 459 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (491)
..+..+.++|..+++.|+|++|+..|++||+++|+ +..+++++|.+|..+|++++|+.+|++|++++|++..+++++|.
T Consensus 194 ~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~ 272 (336)
T 1p5q_A 194 LRLASHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAV 272 (336)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
Confidence 45678999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHH-HHHHHHHHcc
Q 011184 460 ALSAMGMENEA-QVALKEGTTL 480 (491)
Q Consensus 460 ~~~~~~~~~~A-~~~~~~al~l 480 (491)
++..+|++++| ...|+++++.
T Consensus 273 ~~~~~~~~~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 273 CQQRIRRQLAREKKLYANMFER 294 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 5577777654
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=99.25 E-value=4.9e-11 Score=112.74 Aligned_cols=117 Identities=9% Similarity=0.004 Sum_probs=108.3
Q ss_pred hhhhhhHHHHHhHHHHHHHHHHhc--CHHHHHHHHHHHHhcCCCCcHHHHhhHHHHH----Hhc---CChHHHHHHHHHH
Q 011184 373 QMWTDQMQETLNSKKKGDVAFRQK--DLKDAIECYTQFIDAGTMVSPTVYARRSLCY----LMS---DMPQDALNDAMQA 443 (491)
Q Consensus 373 ~~~~~~~~~~~~~~~~g~~~~~~~--~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~----~~~---~~~~~A~~~~~~a 443 (491)
....-.+....+|..+|.++...| ++++|++.++++|..+|. ++.+|+.|+.++ ..+ ++++++++.++++
T Consensus 58 ~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk-~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~ 136 (306)
T 3dra_A 58 LGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEK-NYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAM 136 (306)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTT-CCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHH
T ss_pred HHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcc-cHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHH
Confidence 344456677889999999999999 999999999999999999 899999999999 777 7899999999999
Q ss_pred HhhCCCchHHHHHHHHHHHHCCChH--HHHHHHHHHHcccccccccccC
Q 011184 444 QIISPIWHIASYLQAAALSAMGMEN--EAQVALKEGTTLEAKKNSTAGQ 490 (491)
Q Consensus 444 l~l~p~~~~a~~~~g~~~~~~~~~~--~A~~~~~~al~l~~~~~~~~~~ 490 (491)
++++|.+..+|+.+|.++..+|.++ ++++.+++++++||+|..||..
T Consensus 137 l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~ 185 (306)
T 3dra_A 137 LSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSH 185 (306)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHH
Confidence 9999999999999999999999999 9999999999999999999853
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.25 E-value=2.5e-11 Score=114.91 Aligned_cols=107 Identities=8% Similarity=-0.187 Sum_probs=96.7
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-----cHHHHhhHHHHHHhc-CChHHHHHHHHHHHhhCCCc---
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMS-DMPQDALNDAMQAQIISPIW--- 450 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~-~~~~~A~~~~~~al~l~p~~--- 450 (491)
..+..+.+.|..+.+.|+|++|+.+|++|+++.|.. ...++.++|.+|... |++++|+..|++|+++.|..
T Consensus 75 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~ 154 (292)
T 1qqe_A 75 EAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSV 154 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCCh
Confidence 457899999999999999999999999999987751 146789999999996 99999999999999999865
Q ss_pred ---hHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccc
Q 011184 451 ---HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 486 (491)
Q Consensus 451 ---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 486 (491)
..++.++|.++..+|+|++|+..|+++++++|++..
T Consensus 155 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 193 (292)
T 1qqe_A 155 ALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRL 193 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTT
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCc
Confidence 578999999999999999999999999999998764
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.25 E-value=5.1e-11 Score=109.48 Aligned_cols=105 Identities=10% Similarity=-0.105 Sum_probs=64.3
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 460 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (491)
.+..+...|..++..|++++|++.|.++++.+|. +..++..+|.++..+|++++|+..++++++++|++..+++.++.+
T Consensus 140 ~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 218 (252)
T 2ho1_A 140 RSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRN-QPSVALEMADLLYKEREYVPARQYYDLFAQGGGQNARSLLLGIRL 218 (252)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHH
Confidence 4455555666666666666666666666666665 555556666666666666666666666666666666666666666
Q ss_pred HHHCCChHHHHHHHHHHHcccccccc
Q 011184 461 LSAMGMENEAQVALKEGTTLEAKKNS 486 (491)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~l~~~~~~ 486 (491)
+..+|++++|.+.++++++++|++..
T Consensus 219 ~~~~g~~~~A~~~~~~~~~~~p~~~~ 244 (252)
T 2ho1_A 219 AKVFEDRDTAASYGLQLKRLYPGSLE 244 (252)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTSHH
T ss_pred HHHccCHHHHHHHHHHHHHHCCCCHH
Confidence 66666666666666666666665543
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.25 E-value=3.4e-11 Score=104.71 Aligned_cols=110 Identities=12% Similarity=-0.037 Sum_probs=92.8
Q ss_pred hhhhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHH-HHhcCChHHHHHHHHHHHhhCCCchHH
Q 011184 375 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLC-YLMSDMPQDALNDAMQAQIISPIWHIA 453 (491)
Q Consensus 375 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~A~~~~~~al~l~p~~~~a 453 (491)
....+.++..++.+|..+.+.|++++|+..|+++++.+| ++.++...+.+ +...+...+|+..++++++++|+++.+
T Consensus 33 l~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p--~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~ 110 (176)
T 2r5s_A 33 SDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ--DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFEL 110 (176)
T ss_dssp CHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC--CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHH
T ss_pred HHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC--ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHH
Confidence 445677888999999999999999999999999999999 34454444433 333344557899999999999999999
Q ss_pred HHHHHHHHHHCCChHHHHHHHHHHHcccccccc
Q 011184 454 SYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 486 (491)
Q Consensus 454 ~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 486 (491)
++++|.++..+|++++|+..|+++++++|+..+
T Consensus 111 ~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~ 143 (176)
T 2r5s_A 111 ACELAVQYNQVGRDEEALELLWNILKVNLGAQD 143 (176)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTT
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHhCcccCh
Confidence 999999999999999999999999999997643
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.25 E-value=4.5e-11 Score=107.39 Aligned_cols=107 Identities=8% Similarity=-0.012 Sum_probs=98.6
Q ss_pred HHHHhHHHHHHHHHHh-cCHHHHHHHHHHHHh--cCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHH
Q 011184 380 QETLNSKKKGDVAFRQ-KDLKDAIECYTQFID--AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 456 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~-~~~~~A~~~~~~al~--~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 456 (491)
.++..+...|..++.. |++++|++.|+++++ .+|. ...++.++|.++...|++++|+..++++++++|.+..+++.
T Consensus 74 ~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 152 (225)
T 2vq2_A 74 DSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPT-PYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKE 152 (225)
T ss_dssp TCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred CChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHH
Confidence 4567889999999999 999999999999999 6666 67889999999999999999999999999999999999999
Q ss_pred HHHHHHHCCChHHHHHHHHHHHcccc-ccccc
Q 011184 457 QAAALSAMGMENEAQVALKEGTTLEA-KKNST 487 (491)
Q Consensus 457 ~g~~~~~~~~~~~A~~~~~~al~l~~-~~~~~ 487 (491)
+|.++..+|++++|++.|+++++++| .+...
T Consensus 153 la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 184 (225)
T 2vq2_A 153 LARTKMLAGQLGDADYYFKKYQSRVEVLQADD 184 (225)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHCSCCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHH
Confidence 99999999999999999999999999 66544
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.25 E-value=4.4e-11 Score=114.08 Aligned_cols=108 Identities=12% Similarity=0.052 Sum_probs=102.0
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHH
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 459 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (491)
.++..++.+|..++..|+|++|+..|+++++.+|+ +..++..+|.++...|++++|+..++++++++|++..+++.+|.
T Consensus 19 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~ 97 (327)
T 3cv0_A 19 MYHENPMEEGLSMLKLANLAEAALAFEAVCQAAPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAV 97 (327)
T ss_dssp GGSSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHH
Confidence 35567899999999999999999999999999999 88999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 460 ALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 460 ~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
++..+|++++|++.|+++++++|++...+
T Consensus 98 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 126 (327)
T 3cv0_A 98 SHTNEHNANAALASLRAWLLSQPQYEQLG 126 (327)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTSTTTTTC-
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCccHHHH
Confidence 99999999999999999999999887654
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.25 E-value=1.3e-11 Score=101.19 Aligned_cols=72 Identities=8% Similarity=-0.133 Sum_probs=68.1
Q ss_pred cHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHccccccccc
Q 011184 416 SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
.+.++.++|.++.+.|+|++|+..|++||+++|+++.+|+++|.+|..+|+|++|+++|++|++++|++...
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 78 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRAD 78 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchh
Confidence 567789999999999999999999999999999999999999999999999999999999999999987643
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=2.9e-11 Score=124.83 Aligned_cols=116 Identities=7% Similarity=-0.126 Sum_probs=108.6
Q ss_pred hhhhhHHHHHhHHHHHHHHHHhcC----------HHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcC--ChHHHHHHHH
Q 011184 374 MWTDQMQETLNSKKKGDVAFRQKD----------LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD--MPQDALNDAM 441 (491)
Q Consensus 374 ~~~~~~~~~~~~~~~g~~~~~~~~----------~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~--~~~~A~~~~~ 441 (491)
.....+....+|..+|.++...|+ |++|++.|+++|+.+|. ++.+|+.|+.++.+++ ++++|++.++
T Consensus 55 ~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK-~y~aW~hR~w~l~~l~~~~~~~el~~~~ 133 (567)
T 1dce_A 55 ILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCA 133 (567)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHHHHHHH
T ss_pred HHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccccHHHHHHHHH
Confidence 344566778899999999999998 99999999999999999 9999999999999999 6699999999
Q ss_pred HHHhhCCCchHHHHHHHHHHHHCC-ChHHHHHHHHHHHcccccccccccC
Q 011184 442 QAQIISPIWHIASYLQAAALSAMG-MENEAQVALKEGTTLEAKKNSTAGQ 490 (491)
Q Consensus 442 ~al~l~p~~~~a~~~~g~~~~~~~-~~~~A~~~~~~al~l~~~~~~~~~~ 490 (491)
++++++|.+..||+++|.++..+| .+++|+++++++++++|.|..||..
T Consensus 134 k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~ 183 (567)
T 1dce_A 134 RFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHY 183 (567)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHH
T ss_pred HHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHH
Confidence 999999999999999999999999 9999999999999999999999864
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.24 E-value=9.3e-12 Score=104.18 Aligned_cols=86 Identities=7% Similarity=-0.083 Sum_probs=77.9
Q ss_pred HHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHccc
Q 011184 402 IECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE 481 (491)
Q Consensus 402 ~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 481 (491)
-..|.++++++|+ +...++++|.++...|++++|+..|+++++++|+++.+|+.+|.++..+|+|++|+.+|++|++++
T Consensus 4 ~~~l~~al~~~p~-~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 82 (142)
T 2xcb_A 4 GGTLAMLRGLSED-TLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMD 82 (142)
T ss_dssp -----CCTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred chhHHHHHcCCHH-HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 3578899999999 889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccc
Q 011184 482 AKKNSTA 488 (491)
Q Consensus 482 ~~~~~~~ 488 (491)
|++..++
T Consensus 83 p~~~~~~ 89 (142)
T 2xcb_A 83 INEPRFP 89 (142)
T ss_dssp TTCTHHH
T ss_pred CCCcHHH
Confidence 9987654
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.24 E-value=4.1e-11 Score=114.31 Aligned_cols=103 Identities=15% Similarity=0.124 Sum_probs=99.7
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHH
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 459 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (491)
.++..+...|..+...|++++|++.|+++++.+|+ +..++.++|.++...|++++|+..++++++++|++..+|+.+|.
T Consensus 170 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~ 248 (327)
T 3cv0_A 170 NDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPD-DAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAV 248 (327)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 45678999999999999999999999999999999 88999999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHHHccccc
Q 011184 460 ALSAMGMENEAQVALKEGTTLEAK 483 (491)
Q Consensus 460 ~~~~~~~~~~A~~~~~~al~l~~~ 483 (491)
++..+|++++|++.|+++++++|+
T Consensus 249 ~~~~~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 249 SYSNMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHhccHHHHHHHHHHHHHhCCc
Confidence 999999999999999999999998
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.24 E-value=4.7e-11 Score=112.91 Aligned_cols=94 Identities=11% Similarity=-0.007 Sum_probs=87.4
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHCCChHH-HH
Q 011184 393 FRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENE-AQ 471 (491)
Q Consensus 393 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~-A~ 471 (491)
...|++++|+..|+++++.+|+ ++.+++++|.++..+|++++|++.+++|++++|+++.+++++|.++..+|++++ |.
T Consensus 177 ~~~~~~~eA~~~~~~~l~~~p~-~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~ 255 (291)
T 3mkr_A 177 AGGEKLQDAYYIFQEMADKCSP-TLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTN 255 (291)
T ss_dssp HCTTHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHH
T ss_pred hCchHHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHH
Confidence 3458999999999999999999 899999999999999999999999999999999999999999999999999986 56
Q ss_pred HHHHHHHccccccccc
Q 011184 472 VALKEGTTLEAKKNST 487 (491)
Q Consensus 472 ~~~~~al~l~~~~~~~ 487 (491)
+.++++++++|++...
T Consensus 256 ~~~~~~~~~~P~~~~~ 271 (291)
T 3mkr_A 256 RYLSQLKDAHRSHPFI 271 (291)
T ss_dssp HHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHhCCCChHH
Confidence 8899999999998653
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.24 E-value=4.6e-11 Score=116.64 Aligned_cols=144 Identities=12% Similarity=0.129 Sum_probs=107.7
Q ss_pred ccccccccCCCCCccEEEEEEECCCCEEEEEEeC--CCC-CCChhHHHHHHHHHhccC--CCCcceEEeEeecC---Cee
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFN--RMA-WPDPRQFLEEARSVGQLR--NNRLTNLLGCCCEG---DER 128 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--H~niv~~~~~~~~~---~~~ 128 (491)
.....+..++.|.++.||+....+ ..+++|+.. ... ......+.+|+.+++.|. +..+++++.++.+. +..
T Consensus 38 ~~~~~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~ 116 (359)
T 3dxp_A 38 AGPLSVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRA 116 (359)
T ss_dssp CCCCEEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSC
T ss_pred CCCceEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCe
Confidence 333456678899999999988754 678888875 332 122457889999999996 45688999988776 458
Q ss_pred EEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhC----------------------------------
Q 011184 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK---------------------------------- 174 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---------------------------------- 174 (491)
++||||++|.++.+.. ...++...+..++.+++..|..||+.
T Consensus 117 ~~vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (359)
T 3dxp_A 117 FYIMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETE 192 (359)
T ss_dssp EEEEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCS
T ss_pred EEEEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCc
Confidence 9999999988775422 23467888889999999999999972
Q ss_pred -----------------------CCcccccccccceeeCCCCC--eEEccCCCccc
Q 011184 175 -----------------------GRALYHDLNAYRILFDEDGN--PRLSTFGLMKN 205 (491)
Q Consensus 175 -----------------------~~iiH~Dlkp~Nill~~~~~--~kl~Dfgla~~ 205 (491)
..++|+|+++.|||++.++. +.|+||+.+..
T Consensus 193 ~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 193 SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 12899999999999987653 68999998764
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.23 E-value=4.8e-11 Score=113.98 Aligned_cols=101 Identities=12% Similarity=-0.095 Sum_probs=55.3
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHH
Q 011184 382 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 461 (491)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (491)
+..+..+|..+...|++++|++.|+++++..|+ ....+..+|.+|...|++++|+..++++++++|+++.+++.+|.++
T Consensus 125 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~ 203 (330)
T 3hym_B 125 GPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKG-CHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVA 203 (330)
T ss_dssp THHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 444555555555555555555555555555555 4444455555555555555555555555555555555555555555
Q ss_pred HHCCChHHHHHHHHHHHccccc
Q 011184 462 SAMGMENEAQVALKEGTTLEAK 483 (491)
Q Consensus 462 ~~~~~~~~A~~~~~~al~l~~~ 483 (491)
..+|++++|+..|++++++.++
T Consensus 204 ~~~~~~~~A~~~~~~a~~~~~~ 225 (330)
T 3hym_B 204 FQNGEWKTAEKWFLDALEKIKA 225 (330)
T ss_dssp HHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHcccHHHHHHHHHHHHHHhhh
Confidence 5555555555555555555443
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.23 E-value=7.1e-12 Score=127.10 Aligned_cols=109 Identities=15% Similarity=0.044 Sum_probs=97.4
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 457 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (491)
.+.++..+..+|..+++.|+|++|++.|++|++++|+ ++.+++++|.+|..+|++++|++.|++|++++|++..++.++
T Consensus 36 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l 114 (477)
T 1wao_1 36 NPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKY 114 (477)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHH
T ss_pred CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4456889999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHH--HHHCCChHHHHHHHH-----------HHHccccccccc
Q 011184 458 AAA--LSAMGMENEAQVALK-----------EGTTLEAKKNST 487 (491)
Q Consensus 458 g~~--~~~~~~~~~A~~~~~-----------~al~l~~~~~~~ 487 (491)
|.+ +..+|++++|++.++ ++++++|+...+
T Consensus 115 ~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~~~~ 157 (477)
T 1wao_1 115 QECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSGP 157 (477)
T ss_dssp HHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTCCSC
T ss_pred HHHHHHHHHHHHHHHhccccccchhHhhhhhhhcccccccccc
Confidence 999 899999999999999 888888876554
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.23 E-value=5.7e-11 Score=101.44 Aligned_cols=105 Identities=12% Similarity=0.007 Sum_probs=94.9
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 457 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (491)
.+.++..+...|..++..|+|++|++.|.++++++|+ +..++.++|.++..+|++++|+..|+++++++|++..++..+
T Consensus 43 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~ 121 (166)
T 1a17_A 43 NPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKY 121 (166)
T ss_dssp STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3456788999999999999999999999999999999 889999999999999999999999999999999999998555
Q ss_pred HHH--HHHCCChHHHHHHHHHHHccccc
Q 011184 458 AAA--LSAMGMENEAQVALKEGTTLEAK 483 (491)
Q Consensus 458 g~~--~~~~~~~~~A~~~~~~al~l~~~ 483 (491)
+.+ +..+|++++|++.+.++..+-+.
T Consensus 122 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~ 149 (166)
T 1a17_A 122 QECNKIVKQKAFERAIAGDEHKRSVVDS 149 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcccchHHHhcc
Confidence 555 88999999999999998776543
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.23 E-value=3.4e-11 Score=109.22 Aligned_cols=103 Identities=15% Similarity=0.049 Sum_probs=92.4
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcH---HHHhhHHHHHHh------------------cCChHHHHHHH
Q 011184 382 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP---TVYARRSLCYLM------------------SDMPQDALNDA 440 (491)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~---~~~~~~~~~~~~------------------~~~~~~A~~~~ 440 (491)
..+++.+|..+++.|+|++|+..|+++++.+|+ +. .+++.+|.++.. .|++++|+..|
T Consensus 41 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~-~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 119 (225)
T 2yhc_A 41 QQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPT-HPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDF 119 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC-CCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHH
Confidence 468899999999999999999999999999998 43 378888988876 57899999999
Q ss_pred HHHHhhCCCchHHH-----------------HHHHHHHHHCCChHHHHHHHHHHHccccccc
Q 011184 441 MQAQIISPIWHIAS-----------------YLQAAALSAMGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 441 ~~al~l~p~~~~a~-----------------~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 485 (491)
+++++.+|++..++ +.+|.+|+.+|+|++|+..|+++++.+|++.
T Consensus 120 ~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~ 181 (225)
T 2yhc_A 120 SKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQ 181 (225)
T ss_dssp HHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSH
T ss_pred HHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCC
Confidence 99999999987655 6889999999999999999999999999875
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.22 E-value=5.5e-11 Score=112.43 Aligned_cols=110 Identities=14% Similarity=-0.071 Sum_probs=94.9
Q ss_pred HHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHH--HHHHhcCChHHHHHHHHHHHhhCCCchHHHHH
Q 011184 379 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRS--LCYLMSDMPQDALNDAMQAQIISPIWHIASYL 456 (491)
Q Consensus 379 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~--~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 456 (491)
+.+...+..+|..+.+.|++++|++.|+++++.+|+ ........+ ..+...|++++|+..|+++++.+|+++.+|++
T Consensus 127 ~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~-~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~ 205 (291)
T 3mkr_A 127 GDSLECMAMTVQILLKLDRLDLARKELKKMQDQDED-ATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNG 205 (291)
T ss_dssp CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHH
Confidence 355678899999999999999999999999999998 543322222 22334589999999999999999999999999
Q ss_pred HHHHHHHCCChHHHHHHHHHHHccccccccccc
Q 011184 457 QAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 489 (491)
Q Consensus 457 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~ 489 (491)
+|.++..+|++++|++.|++|++++|++.+++.
T Consensus 206 la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~ 238 (291)
T 3mkr_A 206 QAACHMAQGRWEAAEGVLQEALDKDSGHPETLI 238 (291)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 999999999999999999999999999987653
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.21 E-value=1.1e-10 Score=117.12 Aligned_cols=106 Identities=14% Similarity=0.104 Sum_probs=97.9
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcH----HHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHH
Q 011184 382 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP----TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 457 (491)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (491)
...+...|..++..|++++|++.|+++++++|+ ++ .++.++|.++...|++++|+..++++++++|+++.+|+.+
T Consensus 257 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l 335 (450)
T 2y4t_A 257 LNKLIESAEELIRDGRYTDATSKYESVMKTEPS-IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDR 335 (450)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 344566699999999999999999999999998 53 4789999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 458 AAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 458 g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
|.++..+|++++|+..|+++++++|++..++
T Consensus 336 ~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 366 (450)
T 2y4t_A 336 AEAYLIEEMYDEAIQDYETAQEHNENDQQIR 366 (450)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTSSSCHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhCcchHHHH
Confidence 9999999999999999999999999987653
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.21 E-value=1.4e-10 Score=107.74 Aligned_cols=105 Identities=10% Similarity=0.020 Sum_probs=78.8
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCc----------
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---------- 450 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~---------- 450 (491)
++..+..+|..++..|++++|++.|+++++++|+ +..++.++|.+|..+|++++|+..|+++++++|++
T Consensus 76 ~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 154 (275)
T 1xnf_A 76 MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPT-YNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA 154 (275)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCcc-ccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 4556667777777777777777777777777776 66677777777777777777777777777777665
Q ss_pred ------------------------------------------------------------hHHHHHHHHHHHHCCChHHH
Q 011184 451 ------------------------------------------------------------HIASYLQAAALSAMGMENEA 470 (491)
Q Consensus 451 ------------------------------------------------------------~~a~~~~g~~~~~~~~~~~A 470 (491)
+.+|+.+|.++..+|++++|
T Consensus 155 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 234 (275)
T 1xnf_A 155 EQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSA 234 (275)
T ss_dssp HHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHhcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHHHH
Confidence 36778888888888888888
Q ss_pred HHHHHHHHcccccccc
Q 011184 471 QVALKEGTTLEAKKNS 486 (491)
Q Consensus 471 ~~~~~~al~l~~~~~~ 486 (491)
+..|++|++++|++..
T Consensus 235 ~~~~~~al~~~p~~~~ 250 (275)
T 1xnf_A 235 TALFKLAVANNVHNFV 250 (275)
T ss_dssp HHHHHHHHTTCCTTCH
T ss_pred HHHHHHHHhCCchhHH
Confidence 8888888888886643
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.19 E-value=2.1e-10 Score=93.82 Aligned_cols=88 Identities=9% Similarity=-0.036 Sum_probs=83.1
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 457 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (491)
.+.++..+..+|..++..|++++|++.|+++++.+|+ +..++.++|.++..+|++++|+..++++++++|.+..+++.+
T Consensus 46 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l 124 (133)
T 2lni_A 46 NPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPT-FIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGY 124 (133)
T ss_dssp CTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHH
Confidence 4456788999999999999999999999999999999 889999999999999999999999999999999999999999
Q ss_pred HHHHHHCCC
Q 011184 458 AAALSAMGM 466 (491)
Q Consensus 458 g~~~~~~~~ 466 (491)
|.++..+|+
T Consensus 125 ~~~~~~~~~ 133 (133)
T 2lni_A 125 QRCMMAQYN 133 (133)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHhcC
Confidence 999998774
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=4.4e-11 Score=123.49 Aligned_cols=115 Identities=8% Similarity=-0.030 Sum_probs=107.2
Q ss_pred hhhhhHHHHHhHHHHHHHHHHhc--CHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcC-ChHHHHHHHHHHHhhCCCc
Q 011184 374 MWTDQMQETLNSKKKGDVAFRQK--DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD-MPQDALNDAMQAQIISPIW 450 (491)
Q Consensus 374 ~~~~~~~~~~~~~~~g~~~~~~~--~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~al~l~p~~ 450 (491)
.....+++..+|..+|.++.+.+ +|++|++.++++|+++|. +..+|++|+.++..+| .+++|+++++++|+++|.+
T Consensus 99 ~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~-N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n 177 (567)
T 1dce_A 99 CLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSN 177 (567)
T ss_dssp HHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCC
T ss_pred HHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccc-cccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCC
Confidence 34456788899999999999999 779999999999999999 8999999999999999 8999999999999999999
Q ss_pred hHHHHHHHHHHHHC--------------CChHHHHHHHHHHHccccccccccc
Q 011184 451 HIASYLQAAALSAM--------------GMENEAQVALKEGTTLEAKKNSTAG 489 (491)
Q Consensus 451 ~~a~~~~g~~~~~~--------------~~~~~A~~~~~~al~l~~~~~~~~~ 489 (491)
..||+++|.++..+ +.+++|++++++|++++|++..+|.
T Consensus 178 ~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~ 230 (567)
T 1dce_A 178 YSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWF 230 (567)
T ss_dssp HHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHH
T ss_pred ccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCccHHH
Confidence 99999999999886 5689999999999999999999885
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.2e-10 Score=117.55 Aligned_cols=102 Identities=14% Similarity=-0.027 Sum_probs=45.6
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-------CcHHHHhhHHHHHHhc--CChHHHHHHHHHHHhhCCCchHHH
Q 011184 384 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTM-------VSPTVYARRSLCYLMS--DMPQDALNDAMQAQIISPIWHIAS 454 (491)
Q Consensus 384 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-------~~~~~~~~~~~~~~~~--~~~~~A~~~~~~al~l~p~~~~a~ 454 (491)
.+.++|.+++..|+|++|+.+|++++++.+. ..+.++.+.|.++... ++|++|++.|++|++++|+++.++
T Consensus 96 ~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~ 175 (472)
T 4g1t_A 96 TWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFT 175 (472)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHH
Confidence 3444444444455555555555444433110 1234444444444332 234445555555555555555444
Q ss_pred HHHHHHHH---HCCChHHHHHHHHHHHccccccc
Q 011184 455 YLQAAALS---AMGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 455 ~~~g~~~~---~~~~~~~A~~~~~~al~l~~~~~ 485 (491)
+.+|.++. ..+++++|++.|++|++++|++.
T Consensus 176 ~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~ 209 (472)
T 4g1t_A 176 SGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQ 209 (472)
T ss_dssp HHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCH
T ss_pred HHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcch
Confidence 44444432 23444444555555555544443
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.14 E-value=4.1e-11 Score=115.93 Aligned_cols=104 Identities=13% Similarity=-0.001 Sum_probs=60.3
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHH-H
Q 011184 383 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA-L 461 (491)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~-~ 461 (491)
..++++|..+++.|+|++|+..|++||+++|+ +..+|+++|.+|..+|++++|+.+|++|++++|++..++..++.+ .
T Consensus 231 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~ 309 (338)
T 2if4_A 231 PCHLNIAACLIKLKRYDEAIGHCNIVLTEEEK-NPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAE 309 (338)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-----------------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 47899999999999999999999999999999 899999999999999999999999999999999999999999998 4
Q ss_pred HHCCChHHHHHHHHHHHccccccccc
Q 011184 462 SAMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 462 ~~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
...+.+++|...|+++++++|++...
T Consensus 310 ~~~~~~~~a~~~~~~~l~~~p~~~~~ 335 (338)
T 2if4_A 310 QEKALYQKQKEMYKGIFKGKDEGGAK 335 (338)
T ss_dssp --------------------------
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCCCC
Confidence 56678899999999999999987654
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.14 E-value=2.1e-10 Score=117.60 Aligned_cols=110 Identities=13% Similarity=0.049 Sum_probs=103.2
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 457 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (491)
.+.++..+...|..+...|++++|++.|+++++++|+ +..++.++|.++...|++++|+..++++++++|+++.+++.+
T Consensus 306 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l 384 (537)
T 3fp2_A 306 NPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPE-NVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFF 384 (537)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 3456778999999999999999999999999999999 888999999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 458 AAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 458 g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
|.++..+|++++|++.|+++++++|++...+
T Consensus 385 ~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 415 (537)
T 3fp2_A 385 AEILTDRGDFDTAIKQYDIAKRLEEVQEKIH 415 (537)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHCSSCS
T ss_pred HHHHHHhCCHHHHHHHHHHHHHcCCcchhhH
Confidence 9999999999999999999999999887654
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=2.6e-10 Score=108.89 Aligned_cols=118 Identities=12% Similarity=-0.036 Sum_probs=108.5
Q ss_pred hhhhhhhHHHHHhHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhc-C-ChHHHHHHHHHHHhhCC
Q 011184 372 FQMWTDQMQETLNSKKKGDVAFRQK-DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMS-D-MPQDALNDAMQAQIISP 448 (491)
Q Consensus 372 ~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~-~-~~~~A~~~~~~al~l~p 448 (491)
-....-.+.+..+|..++.++...| +++++++.++++|..+|. ++.+|+.|+.++..+ + +++++++.++++|+++|
T Consensus 78 ~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dp 156 (349)
T 3q7a_A 78 EIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLK-SYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDP 156 (349)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCT
T ss_pred HHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCC
Confidence 3344556678889999999999999 599999999999999999 999999999999998 8 89999999999999999
Q ss_pred CchHHHHHHHHHHHHCCChH--------HHHHHHHHHHcccccccccccC
Q 011184 449 IWHIASYLQAAALSAMGMEN--------EAQVALKEGTTLEAKKNSTAGQ 490 (491)
Q Consensus 449 ~~~~a~~~~g~~~~~~~~~~--------~A~~~~~~al~l~~~~~~~~~~ 490 (491)
.|..||+.++.++..+|.++ ++++.++++++++|.|..||..
T Consensus 157 kNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~ 206 (349)
T 3q7a_A 157 KNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGW 206 (349)
T ss_dssp TCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 99999999999999999998 9999999999999999999864
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=1.9e-10 Score=109.36 Aligned_cols=114 Identities=8% Similarity=-0.021 Sum_probs=106.1
Q ss_pred hhhhHHHHHhHHHHHHHHHHhc--CHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCC-hHHHHHHHHHHHhhCCCch
Q 011184 375 WTDQMQETLNSKKKGDVAFRQK--DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM-PQDALNDAMQAQIISPIWH 451 (491)
Q Consensus 375 ~~~~~~~~~~~~~~g~~~~~~~--~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~-~~~A~~~~~~al~l~p~~~ 451 (491)
....+++..+|..++.++...+ ++++++++++++++.+|. +..+|++++.+....|. +++++++++++|+++|.|.
T Consensus 101 L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dpr-Ny~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~ 179 (331)
T 3dss_A 101 LRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNY 179 (331)
T ss_dssp HHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCH
T ss_pred HHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCH
Confidence 3456788899999999999988 599999999999999999 99999999999999999 5999999999999999999
Q ss_pred HHHHHHHHHHHHC--------------CChHHHHHHHHHHHccccccccccc
Q 011184 452 IASYLQAAALSAM--------------GMENEAQVALKEGTTLEAKKNSTAG 489 (491)
Q Consensus 452 ~a~~~~g~~~~~~--------------~~~~~A~~~~~~al~l~~~~~~~~~ 489 (491)
.||+++|.++..+ +.++++++++++|+.++|+|..+|.
T Consensus 180 SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~ 231 (331)
T 3dss_A 180 SSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWF 231 (331)
T ss_dssp HHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred HHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHH
Confidence 9999999999888 5699999999999999999999985
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.13 E-value=2.1e-10 Score=119.39 Aligned_cols=109 Identities=17% Similarity=0.123 Sum_probs=98.6
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhc------CCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHH
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDA------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIA 453 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a 453 (491)
.++..+...|..+.+.|++++|++.|+++++. +|+....+|..++.+|.+.|++++|++.|+++++++|+++.+
T Consensus 473 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~ 552 (597)
T 2xpi_A 473 YDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANV 552 (597)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHH
T ss_pred CChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHH
Confidence 35677889999999999999999999999988 666237889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 454 SYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 454 ~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
|+.+|.+|...|++++|++.|+++++++|++..++
T Consensus 553 ~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~ 587 (597)
T 2xpi_A 553 HTAIALVYLHKKIPGLAITHLHESLAISPNEIMAS 587 (597)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHH
Confidence 99999999999999999999999999999987654
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=99.12 E-value=2.5e-10 Score=108.76 Aligned_cols=107 Identities=7% Similarity=-0.105 Sum_probs=71.1
Q ss_pred hHHHHHhHHHHHHHHHH-------hcCH-------HHHHHHHHHHHh-cCCCCcHHHHhhHHHHHHhcCChHHHHHHHHH
Q 011184 378 QMQETLNSKKKGDVAFR-------QKDL-------KDAIECYTQFID-AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQ 442 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~-------~~~~-------~~A~~~~~~al~-~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 442 (491)
.+.++..|+..|..+.. .|++ ++|+..|++|++ ++|+ +..+|.+.|..+...|++++|...|++
T Consensus 46 ~p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~ 124 (308)
T 2ond_A 46 LGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKK-NMLLYFAYADYEESRMKYEKVHSIYNR 124 (308)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTT-CHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 34555666666666543 3554 677777777776 5666 666666777777777777777777777
Q ss_pred HHhhCCCchH-HHHHHHHHHHHCCChHHHHHHHHHHHccccccc
Q 011184 443 AQIISPIWHI-ASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 443 al~l~p~~~~-a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 485 (491)
+++++|.++. +|.++|.++...|++++|+..|++|++++|.+.
T Consensus 125 al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~ 168 (308)
T 2ond_A 125 LLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRH 168 (308)
T ss_dssp HHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCT
T ss_pred HHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCH
Confidence 7777776665 677777777777777777777777776666543
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.12 E-value=4.4e-11 Score=104.00 Aligned_cols=106 Identities=12% Similarity=-0.012 Sum_probs=92.6
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 460 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (491)
....++.+|..+.+.|++++|+..|+++++.+|+ +..++.++|.++...|++++|+..++++++++| ++..+..+|.+
T Consensus 5 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~ 82 (176)
T 2r5s_A 5 PDEQLLKQVSELLQQGEHAQALNVIQTLSDELQS-RGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKSLIAKL 82 (176)
T ss_dssp -CTTHHHHHHHHHHTTCHHHHHHHHHTSCHHHHT-SHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHHHHHH
Confidence 3456889999999999999999999999999999 899999999999999999999999999999999 88777766655
Q ss_pred H-HHCCChHHHHHHHHHHHcccccccccc
Q 011184 461 L-SAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 461 ~-~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
. ...++..+|+..|+++++++|++..++
T Consensus 83 ~~~~~~~~~~a~~~~~~al~~~P~~~~~~ 111 (176)
T 2r5s_A 83 ELHQQAAESPELKRLEQELAANPDNFELA 111 (176)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHhhcccchHHHHHHHHHHhCCCCHHHH
Confidence 3 344455678999999999999987654
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.12 E-value=3.7e-10 Score=90.82 Aligned_cols=80 Identities=3% Similarity=-0.158 Sum_probs=74.3
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 457 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (491)
.+..+..++.+|..++..|+|++|++.|+++++++|+ ++.+++++|.++..+|++++|+..++++++++|+++......
T Consensus 23 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 101 (117)
T 3k9i_A 23 GKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN-HQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYK 101 (117)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTH
T ss_pred CccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 4678899999999999999999999999999999999 899999999999999999999999999999999998775433
Q ss_pred H
Q 011184 458 A 458 (491)
Q Consensus 458 g 458 (491)
.
T Consensus 102 ~ 102 (117)
T 3k9i_A 102 Q 102 (117)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.11 E-value=2e-10 Score=87.34 Aligned_cols=78 Identities=15% Similarity=0.063 Sum_probs=70.3
Q ss_pred cCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 411 AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 411 ~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
++|.....+++++|.++...|++++|+..|+++++++|+++.+++++|.++..+|++++|+..|+++++++|++..++
T Consensus 3 ~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 80 (91)
T 1na3_A 3 MDPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAK 80 (91)
T ss_dssp ---CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CcccccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHH
Confidence 345436778999999999999999999999999999999999999999999999999999999999999999887654
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.11 E-value=4.1e-10 Score=96.45 Aligned_cols=86 Identities=6% Similarity=-0.128 Sum_probs=80.4
Q ss_pred hhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHH
Q 011184 377 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 456 (491)
Q Consensus 377 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 456 (491)
..+.++..++.+|.++++.|+|++|+..|+++++++|+ +..+|+++|.+|..+|++++|+..|+++++++|++..+|++
T Consensus 40 ~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 118 (164)
T 3sz7_A 40 IAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPK-YSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMK 118 (164)
T ss_dssp HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHH
T ss_pred hCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHH
Confidence 34567889999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 011184 457 QAAALSA 463 (491)
Q Consensus 457 ~g~~~~~ 463 (491)
+|.+...
T Consensus 119 ~~l~~~~ 125 (164)
T 3sz7_A 119 RGLETTK 125 (164)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9987654
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=99.11 E-value=1.9e-10 Score=108.78 Aligned_cols=105 Identities=15% Similarity=0.115 Sum_probs=90.9
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhc------CCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCc---
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDA------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW--- 450 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~--- 450 (491)
..+..+...|..++..|+|++|+..|++|++. ++.....+++++|.+|..+|+|++|+..+++|+++.+..
T Consensus 153 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~ 232 (293)
T 3u3w_A 153 QNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSM 232 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcH
Confidence 34567999999999999999999999999942 222245689999999999999999999999999988655
Q ss_pred ---hHHHHHHHHHHHHCCC-hHHHHHHHHHHHcccccc
Q 011184 451 ---HIASYLQAAALSAMGM-ENEAQVALKEGTTLEAKK 484 (491)
Q Consensus 451 ---~~a~~~~g~~~~~~~~-~~~A~~~~~~al~l~~~~ 484 (491)
+.+|+++|.+|..+|+ +++|++.|++|+++....
T Consensus 233 ~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~~~ 270 (293)
T 3u3w_A 233 ALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDIL 270 (293)
T ss_dssp TTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHh
Confidence 7899999999999995 699999999999886543
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=99.11 E-value=2.3e-10 Score=108.13 Aligned_cols=113 Identities=11% Similarity=-0.070 Sum_probs=104.2
Q ss_pred hhhHHHHHhHHHHHHHH----HHh---cCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChH--HHHHHHHHHHhh
Q 011184 376 TDQMQETLNSKKKGDVA----FRQ---KDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQ--DALNDAMQAQII 446 (491)
Q Consensus 376 ~~~~~~~~~~~~~g~~~----~~~---~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~--~A~~~~~~al~l 446 (491)
...+++..+|..++.++ ... +++++++++++++++.+|. ++.+|+.|+.++..+|.++ ++++.++++|++
T Consensus 97 ~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pk-ny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~ 175 (306)
T 3dra_A 97 LDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPK-NHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDT 175 (306)
T ss_dssp HHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH
T ss_pred HHCcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcccChHHHHHHHHHHHHh
Confidence 34556677888888888 666 7999999999999999999 9999999999999999999 999999999999
Q ss_pred CCCchHHHHHHHHHHHHCCC------hHHHHHHHHHHHccccccccccc
Q 011184 447 SPIWHIASYLQAAALSAMGM------ENEAQVALKEGTTLEAKKNSTAG 489 (491)
Q Consensus 447 ~p~~~~a~~~~g~~~~~~~~------~~~A~~~~~~al~l~~~~~~~~~ 489 (491)
+|.|..||+++|.++..+++ ++++++.++++++++|.|..+|.
T Consensus 176 d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~ 224 (306)
T 3dra_A 176 DLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWN 224 (306)
T ss_dssp CTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHH
Confidence 99999999999999999998 99999999999999999999985
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=5e-10 Score=106.51 Aligned_cols=115 Identities=7% Similarity=-0.127 Sum_probs=103.2
Q ss_pred hhhhHHHHHhHHHHHHHHHHhcC----------HHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCC--hHHHHHHHHH
Q 011184 375 WTDQMQETLNSKKKGDVAFRQKD----------LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM--PQDALNDAMQ 442 (491)
Q Consensus 375 ~~~~~~~~~~~~~~g~~~~~~~~----------~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~--~~~A~~~~~~ 442 (491)
..-.+....+|..++..+...+. +++++.+++++|..+|. ++.+|+.|+.++..+++ ++++++.+++
T Consensus 57 L~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~k 135 (331)
T 3dss_A 57 LGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCAR 135 (331)
T ss_dssp HTTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHCSSCCHHHHHHHHHH
T ss_pred HHHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHhccCcccHHHHHHHHHH
Confidence 33455677788888888877665 79999999999999999 99999999999999984 8999999999
Q ss_pred HHhhCCCchHHHHHHHHHHHHCCC-hHHHHHHHHHHHcccccccccccC
Q 011184 443 AQIISPIWHIASYLQAAALSAMGM-ENEAQVALKEGTTLEAKKNSTAGQ 490 (491)
Q Consensus 443 al~l~p~~~~a~~~~g~~~~~~~~-~~~A~~~~~~al~l~~~~~~~~~~ 490 (491)
+++++|.|..||+++|.++..+|. +++++++++++++++|.|..||..
T Consensus 136 ~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~ 184 (331)
T 3dss_A 136 FLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHY 184 (331)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHH
T ss_pred HHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 999999999999999999999999 599999999999999999999864
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.10 E-value=6.2e-10 Score=90.37 Aligned_cols=90 Identities=10% Similarity=-0.020 Sum_probs=84.6
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 457 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (491)
.+.++..+...|..++..|++++|++.|.++++.+|+ +..++.++|.++..+|++++|+..++++++++|++..+++.+
T Consensus 42 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l 120 (131)
T 2vyi_A 42 NPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPA-YSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNL 120 (131)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCcc-CHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHH
Confidence 3445778999999999999999999999999999999 889999999999999999999999999999999999999999
Q ss_pred HHHHHHCCChH
Q 011184 458 AAALSAMGMEN 468 (491)
Q Consensus 458 g~~~~~~~~~~ 468 (491)
|.++..+|+++
T Consensus 121 ~~~~~~~~~~~ 131 (131)
T 2vyi_A 121 KIAELKLREAP 131 (131)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHhcCC
Confidence 99999999863
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.10 E-value=2.8e-10 Score=114.77 Aligned_cols=92 Identities=13% Similarity=0.086 Sum_probs=84.4
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 460 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (491)
.+..+.++|.++++.|+|++|+..|++||+++|+ +..+|+++|.+|..+|++++|+.+|++|++++|++..++.++|.+
T Consensus 316 ~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 394 (457)
T 1kt0_A 316 LLAAFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMC 394 (457)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3678999999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHH
Q 011184 461 LSAMGMENEAQVA 473 (491)
Q Consensus 461 ~~~~~~~~~A~~~ 473 (491)
+..++++++|...
T Consensus 395 ~~~~~~~~~a~~~ 407 (457)
T 1kt0_A 395 QKKAKEHNERDRR 407 (457)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988754
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.10 E-value=1.6e-10 Score=96.92 Aligned_cols=72 Identities=15% Similarity=0.030 Sum_probs=67.1
Q ss_pred HHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCC-------chH-----HHHHHHHHHHHCCChHHHHHHHHHHHcc----
Q 011184 417 PTVYARRSLCYLMSDMPQDALNDAMQAQIISPI-------WHI-----ASYLQAAALSAMGMENEAQVALKEGTTL---- 480 (491)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~-------~~~-----a~~~~g~~~~~~~~~~~A~~~~~~al~l---- 480 (491)
...+.+.|..+...|+|++|+..|++||+++|+ +.. +|+++|.++..+|+|++|+.+|++||++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 456788999999999999999999999999999 444 9999999999999999999999999999
Q ss_pred ---cccccccc
Q 011184 481 ---EAKKNSTA 488 (491)
Q Consensus 481 ---~~~~~~~~ 488 (491)
+|++..+|
T Consensus 91 ~e~~pd~~~A~ 101 (159)
T 2hr2_A 91 GELNQDEGKLW 101 (159)
T ss_dssp CCTTSTHHHHH
T ss_pred ccCCCchHHHH
Confidence 99999888
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=99.09 E-value=2.4e-10 Score=106.32 Aligned_cols=101 Identities=12% Similarity=-0.030 Sum_probs=94.3
Q ss_pred HHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhh----
Q 011184 379 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA--------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII---- 446 (491)
Q Consensus 379 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l---- 446 (491)
+..+..+..+|..++..|+|++|+..|.+++++ +|. ...++.++|.+|..+|++++|+..|++++++
T Consensus 40 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 118 (283)
T 3edt_B 40 PDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPA-VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKV 118 (283)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchH-HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 567889999999999999999999999999987 355 6778999999999999999999999999999
Q ss_pred ----CCCchHHHHHHHHHHHHCCChHHHHHHHHHHHcc
Q 011184 447 ----SPIWHIASYLQAAALSAMGMENEAQVALKEGTTL 480 (491)
Q Consensus 447 ----~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 480 (491)
+|....+++++|.++..+|++++|++.|++++++
T Consensus 119 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 119 LGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEI 156 (283)
T ss_dssp HCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 5888999999999999999999999999999998
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=99.09 E-value=2.5e-10 Score=106.20 Aligned_cols=104 Identities=12% Similarity=-0.035 Sum_probs=97.0
Q ss_pred HHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhh----
Q 011184 379 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA--------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII---- 446 (491)
Q Consensus 379 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l---- 446 (491)
+..+..+..+|..+...|++++|++.|.+++++ +|. ...++.++|.+|..+|++++|+..+++++++
T Consensus 82 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 160 (283)
T 3edt_B 82 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPD-VAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATR 160 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 567889999999999999999999999999988 466 7788999999999999999999999999999
Q ss_pred ----CCCchHHHHHHHHHHHHCCChHHHHHHHHHHHccccc
Q 011184 447 ----SPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAK 483 (491)
Q Consensus 447 ----~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 483 (491)
.|....+++++|.++..+|++++|+..|++++++.++
T Consensus 161 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 161 LGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 8888999999999999999999999999999998654
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.08 E-value=4.4e-10 Score=88.92 Aligned_cols=69 Identities=13% Similarity=0.051 Sum_probs=66.7
Q ss_pred cHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHcccccc
Q 011184 416 SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 484 (491)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 484 (491)
....+.++|.++...|++++|+..|+++++++|+++.+|+++|.++..+|++++|++.|++|++++|++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 467889999999999999999999999999999999999999999999999999999999999999997
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.08 E-value=3.4e-10 Score=100.26 Aligned_cols=97 Identities=7% Similarity=0.030 Sum_probs=84.5
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHH
Q 011184 382 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 461 (491)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (491)
...+..+|..++..|+|++|+..|+++++++|+ +..+++++|.+|..+|++++|+..|+++++++|++..++..++.++
T Consensus 88 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 166 (198)
T 2fbn_A 88 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCV 166 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHH
Confidence 578899999999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HHCCChHHHH-HHHHHHHc
Q 011184 462 SAMGMENEAQ-VALKEGTT 479 (491)
Q Consensus 462 ~~~~~~~~A~-~~~~~al~ 479 (491)
..+++++++. ..|.+.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~f~ 185 (198)
T 2fbn_A 167 NKLKEARKKDKLTFGGMFD 185 (198)
T ss_dssp HHHHHHHC-----------
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9999999988 55555544
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=99.08 E-value=5.6e-10 Score=105.53 Aligned_cols=104 Identities=14% Similarity=0.090 Sum_probs=90.7
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHH---hcCCCCc---HHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCC-----
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFI---DAGTMVS---PTVYARRSLCYLMSDMPQDALNDAMQAQIISPI----- 449 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al---~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~----- 449 (491)
.+..+...|..++..|+|++|+..|++|+ +..|++. ..+++++|.+|..+|++++|+..+++|+++.++
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~ 233 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMA 233 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCS
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHH
Confidence 46789999999999999999999999999 5555521 268999999999999999999999999998754
Q ss_pred -chHHHHHHHHHHHHCCChHHH-HHHHHHHHcccccc
Q 011184 450 -WHIASYLQAAALSAMGMENEA-QVALKEGTTLEAKK 484 (491)
Q Consensus 450 -~~~a~~~~g~~~~~~~~~~~A-~~~~~~al~l~~~~ 484 (491)
.+.+|+++|.+|..+|++++| ..+|++|+.+....
T Consensus 234 ~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~~~ 270 (293)
T 2qfc_A 234 LIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDIL 270 (293)
T ss_dssp SHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHh
Confidence 278999999999999999999 88899999876443
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.08 E-value=3.6e-10 Score=107.66 Aligned_cols=105 Identities=11% Similarity=0.005 Sum_probs=93.3
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-----cHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCc----
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---- 450 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~---- 450 (491)
..+..+.+.|..+.. |+|++|++.|++|+++.|.. ...++.++|.+|..+|++++|+..|++++++.|++
T Consensus 114 ~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 192 (307)
T 2ifu_A 114 TAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYP 192 (307)
T ss_dssp HHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChh
Confidence 456788999999988 99999999999999987652 25679999999999999999999999999997755
Q ss_pred --hHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccc
Q 011184 451 --HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 486 (491)
Q Consensus 451 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 486 (491)
..+++++|.++..+|++++|+.+|++++ ++|....
T Consensus 193 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~~ 229 (307)
T 2ifu_A 193 TCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFSG 229 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTSTT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCCC
Confidence 3589999999999999999999999999 9997654
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.08 E-value=1.9e-10 Score=96.31 Aligned_cols=78 Identities=13% Similarity=-0.029 Sum_probs=70.2
Q ss_pred hhhhhHHHHHhHHHHHHHHHHhcCH----------HHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcC-----------C
Q 011184 374 MWTDQMQETLNSKKKGDVAFRQKDL----------KDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD-----------M 432 (491)
Q Consensus 374 ~~~~~~~~~~~~~~~g~~~~~~~~~----------~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~-----------~ 432 (491)
.....+.+++.|++.|.++.+.+++ ++|+..|++||+++|+ ...+|+++|.+|..+| +
T Consensus 28 Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~-~~~A~~~LG~ay~~lg~l~P~~~~a~g~ 106 (158)
T 1zu2_A 28 TYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFLTPDETEAKHN 106 (158)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred HHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHhcccCcchhhhhcc
Confidence 3445678899999999999998875 5999999999999999 9999999999999885 8
Q ss_pred hHHHHHHHHHHHhhCCCchH
Q 011184 433 PQDALNDAMQAQIISPIWHI 452 (491)
Q Consensus 433 ~~~A~~~~~~al~l~p~~~~ 452 (491)
+++|+.+|++|++++|++..
T Consensus 107 ~~eA~~~~~kAl~l~P~~~~ 126 (158)
T 1zu2_A 107 FDLATQFFQQAVDEQPDNTH 126 (158)
T ss_dssp HHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHHhCCCCHH
Confidence 99999999999999999853
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.07 E-value=2.9e-10 Score=97.21 Aligned_cols=91 Identities=10% Similarity=0.009 Sum_probs=81.2
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCch-HHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH-IASYL 456 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~-~a~~~ 456 (491)
.+..+..+.++|.++++.|+|++|+..|++||+++|+ ++.+|+++|.+|..+|++++|+.+|++|++++|++. .+...
T Consensus 59 ~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~ 137 (162)
T 3rkv_A 59 DRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKREET-NEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVARE 137 (162)
T ss_dssp HHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 3456778999999999999999999999999999999 999999999999999999999999999999999998 66777
Q ss_pred HHHHHHHCCChHH
Q 011184 457 QAAALSAMGMENE 469 (491)
Q Consensus 457 ~g~~~~~~~~~~~ 469 (491)
++.+...++++.+
T Consensus 138 l~~~~~~~~~~~~ 150 (162)
T 3rkv_A 138 MKIVTERRAEKKA 150 (162)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHH
Confidence 7877766655443
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.06 E-value=7.5e-10 Score=90.12 Aligned_cols=86 Identities=12% Similarity=0.037 Sum_probs=80.4
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhC------CCch
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS------PIWH 451 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~------p~~~ 451 (491)
.+.++..+..+|..+++.|+|++|+..|+++++++|+ +..+|+++|.++..+|++++|+..|+++++++ |++.
T Consensus 34 ~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~ 112 (126)
T 3upv_A 34 APEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPN-FVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAR 112 (126)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHH
T ss_pred CCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHH
Confidence 4566789999999999999999999999999999999 89999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHC
Q 011184 452 IASYLQAAALSAM 464 (491)
Q Consensus 452 ~a~~~~g~~~~~~ 464 (491)
.++..++.+...+
T Consensus 113 ~~~~~l~~~~~~l 125 (126)
T 3upv_A 113 EIDQLYYKASQQR 125 (126)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhh
Confidence 9999998887654
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=99.06 E-value=4.3e-11 Score=113.94 Aligned_cols=181 Identities=13% Similarity=0.111 Sum_probs=120.6
Q ss_pred cccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhcc-CCCC--cceEEeEeecCC---eeEEEEecC
Q 011184 62 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNR--LTNLLGCCCEGD---ERLLVAEYM 135 (491)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~n--iv~~~~~~~~~~---~~~lv~e~~ 135 (491)
+..++.|..+.||+.. ..+++|+.... .....+.+|+.+|+.+ .+.. +++++.....++ ..|+||+++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4456888888888763 46889986532 1245788999999988 3433 455666544333 348999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhC-----------------------------------------
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK----------------------------------------- 174 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~----------------------------------------- 174 (491)
+|.+|..... ..++..++..++.+++..|..||+.
T Consensus 99 ~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 99 KGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred CCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 9988865432 2467777778888888888888851
Q ss_pred ----------------CCcccccccccceeeCC--CCCeEEccCCCcccCCCCCccccCCCC---CCcccccC-----CC
Q 011184 175 ----------------GRALYHDLNAYRILFDE--DGNPRLSTFGLMKNSRDGKSYSTNLAF---TPPEYLRT-----GR 228 (491)
Q Consensus 175 ----------------~~iiH~Dlkp~Nill~~--~~~~kl~Dfgla~~~~~~~~~~~t~~y---~aPE~~~~-----~~ 228 (491)
..++|+|++|.||+++. .+.+.|+||+.+............... ..|+.... +.
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCC
Confidence 01699999999999987 556789999987654332211111111 22322110 00
Q ss_pred ---------CCCCccchhHHHHHHHHHhCCCCC
Q 011184 229 ---------VTPESVIYSFGTLLLDLLSGKHIP 252 (491)
Q Consensus 229 ---------~~~~~Dv~slG~vl~elltg~~~~ 252 (491)
.....+.|++|.+++.+.+|..++
T Consensus 255 ~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 255 KDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 111258999999999999998654
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.06 E-value=2.3e-10 Score=116.48 Aligned_cols=108 Identities=13% Similarity=0.031 Sum_probs=99.4
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcH------HHHhhHHHHHHh---cCChHHHHHHHHHHHhhCCCc
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP------TVYARRSLCYLM---SDMPQDALNDAMQAQIISPIW 450 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~------~~~~~~~~~~~~---~~~~~~A~~~~~~al~l~p~~ 450 (491)
.++..+...|..++..|++++|+..|+++++.+|+ +. .++.++|.++.. .|++++|+..|+++++++|++
T Consensus 370 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~ 448 (514)
T 2gw1_A 370 EAPEVPNFFAEILTDKNDFDKALKQYDLAIELENK-LDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRS 448 (514)
T ss_dssp TCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT-SSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTC
T ss_pred cCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc-cchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCccc
Confidence 45677889999999999999999999999999988 53 388999999999 999999999999999999999
Q ss_pred hHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 451 HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 451 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
+.+++.+|.++..+|++++|++.|+++++++|++..++
T Consensus 449 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 486 (514)
T 2gw1_A 449 EQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKL 486 (514)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccHHHH
Confidence 99999999999999999999999999999999987654
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.06 E-value=8.8e-10 Score=104.15 Aligned_cols=104 Identities=11% Similarity=0.009 Sum_probs=95.1
Q ss_pred HHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhh----
Q 011184 379 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA--------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII---- 446 (491)
Q Consensus 379 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l---- 446 (491)
...+..+..+|..++..|++++|++.|++++++ +|. ...++.++|.+|..+|++++|+..+++++++
T Consensus 150 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 228 (311)
T 3nf1_A 150 PDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPN-VAKTKNNLASCYLKQGKFKQAETLYKEILTRAHER 228 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHH-HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 567788999999999999999999999999988 666 6778999999999999999999999999985
Q ss_pred ---------------------------------------------CCCchHHHHHHHHHHHHCCChHHHHHHHHHHHccc
Q 011184 447 ---------------------------------------------SPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE 481 (491)
Q Consensus 447 ---------------------------------------------~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 481 (491)
+|..+.+++++|.+|..+|++++|++.|++|+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~ 308 (311)
T 3nf1_A 229 EFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSR 308 (311)
T ss_dssp HHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHh
Confidence 47778899999999999999999999999999998
Q ss_pred cc
Q 011184 482 AK 483 (491)
Q Consensus 482 ~~ 483 (491)
|+
T Consensus 309 ~~ 310 (311)
T 3nf1_A 309 KQ 310 (311)
T ss_dssp C-
T ss_pred hc
Confidence 76
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=99.05 E-value=5.4e-10 Score=106.48 Aligned_cols=96 Identities=14% Similarity=-0.024 Sum_probs=81.9
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHH-hcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHH
Q 011184 384 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYL-MSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 462 (491)
Q Consensus 384 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 462 (491)
.|...|..+.+.|++++|+..|++|++.+|. ...+|...+.... ..|++++|+..|+++++++|+++.+|..+|.++.
T Consensus 136 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~-~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 214 (308)
T 2ond_A 136 VYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 214 (308)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 7888888888899999999999999998888 6666665555433 3689999999999999999999999999999999
Q ss_pred HCCChHHHHHHHHHHHcc
Q 011184 463 AMGMENEAQVALKEGTTL 480 (491)
Q Consensus 463 ~~~~~~~A~~~~~~al~l 480 (491)
.+|++++|+..|++|++.
T Consensus 215 ~~g~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 215 HLNEDNNTRVLFERVLTS 232 (308)
T ss_dssp TTCCHHHHHHHHHHHHHS
T ss_pred HCCCHHHHHHHHHHHHhc
Confidence 999999999999999985
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.05 E-value=5.3e-10 Score=94.40 Aligned_cols=102 Identities=12% Similarity=0.110 Sum_probs=73.1
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-----cHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCc------h
Q 011184 383 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW------H 451 (491)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~------~ 451 (491)
..+...|..++..|+|++|++.|++++++.+.. ...++.++|.++..+|++++|+..+++++++.+.. .
T Consensus 50 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 129 (164)
T 3ro3_A 50 IAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEG 129 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHH
Confidence 467777777788888888888888877654431 14567777777777788888888888877775433 3
Q ss_pred HHHHHHHHHHHHCCChHHHHHHHHHHHcccccc
Q 011184 452 IASYLQAAALSAMGMENEAQVALKEGTTLEAKK 484 (491)
Q Consensus 452 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 484 (491)
.+++++|.++..+|++++|++.|++|+++..+.
T Consensus 130 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 162 (164)
T 3ro3_A 130 RACWSLGNAYTALGNHDQAMHFAEKHLEISREV 162 (164)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh
Confidence 567777888888888888888888877765543
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=99.05 E-value=9.8e-10 Score=107.44 Aligned_cols=95 Identities=15% Similarity=0.099 Sum_probs=90.3
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 457 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (491)
.+..+..+.++|..+++.|+|++|++.|++||+++|+ ++.+++++|.+|..+|++++|+.+|++|++++|++..++..+
T Consensus 269 ~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l 347 (370)
T 1ihg_A 269 QPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAEL 347 (370)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4567889999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHH
Q 011184 458 AAALSAMGMENEAQVA 473 (491)
Q Consensus 458 g~~~~~~~~~~~A~~~ 473 (491)
+.++..++++++|.+.
T Consensus 348 ~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 348 LKVKQKIKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988764
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=99.04 E-value=2.1e-09 Score=101.54 Aligned_cols=103 Identities=9% Similarity=-0.051 Sum_probs=88.7
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-----cHHHHhhHHHHHHhcCChHHHHHHHHHHH---hhCCCc--
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQ---IISPIW-- 450 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al---~l~p~~-- 450 (491)
....++..|..+...|+|++|+..|.+|+++.+.. ...+++++|.+|..+|++++|+..|++|+ +..|++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~ 193 (293)
T 2qfc_A 114 FLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEE 193 (293)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCcccc
Confidence 34456778899999999999999999999865541 15589999999999999999999999999 556664
Q ss_pred --hHHHHHHHHHHHHCCChHHHHHHHHHHHccccc
Q 011184 451 --HIASYLQAAALSAMGMENEAQVALKEGTTLEAK 483 (491)
Q Consensus 451 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 483 (491)
..+++++|.+|..+|+|++|++.|++|+++.++
T Consensus 194 ~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~ 228 (293)
T 2qfc_A 194 FDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 269999999999999999999999999998754
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.03 E-value=8.8e-10 Score=114.73 Aligned_cols=101 Identities=8% Similarity=-0.188 Sum_probs=64.6
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 460 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (491)
+...+..+|..+.+.|++++|++.|+++++.+|+ +..+|+.++.+|.+.|++++|++.|+++++++|.++.+|+.+|.+
T Consensus 406 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 484 (597)
T 2xpi_A 406 FGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQG-THLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVV 484 (597)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTT-CSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 3445666666666666666666666666666665 555666666666666666666666666666666666666666666
Q ss_pred HHHCCChHHHHHHHHHHHcccc
Q 011184 461 LSAMGMENEAQVALKEGTTLEA 482 (491)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~l~~ 482 (491)
|...|++++|++.|++++++.|
T Consensus 485 ~~~~g~~~~A~~~~~~~~~~~~ 506 (597)
T 2xpi_A 485 AFNKSDMQTAINHFQNALLLVK 506 (597)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHhhh
Confidence 6666666666666666666643
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=99.03 E-value=6.6e-10 Score=86.67 Aligned_cols=84 Identities=10% Similarity=0.050 Sum_probs=71.4
Q ss_pred HHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCch--HHHHH
Q 011184 379 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH--IASYL 456 (491)
Q Consensus 379 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~--~a~~~ 456 (491)
+.++..++.+|..++..|+|++|++.|+++++++|+ ++.+|+++|.+|..+|++++|+..|++++++.|... .+...
T Consensus 4 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~ 82 (100)
T 3ma5_A 4 PEDPFTRYALAQEHLKHDNASRALALFEELVETDPD-YVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSE 82 (100)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHH
Confidence 446778999999999999999999999999999999 889999999999999999999999999999987543 33334
Q ss_pred HHHHHHH
Q 011184 457 QAAALSA 463 (491)
Q Consensus 457 ~g~~~~~ 463 (491)
++.++..
T Consensus 83 l~~~l~~ 89 (100)
T 3ma5_A 83 LQDAKLK 89 (100)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444433
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.03 E-value=6.2e-10 Score=90.20 Aligned_cols=70 Identities=14% Similarity=-0.028 Sum_probs=66.4
Q ss_pred HHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 419 VYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 419 ~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
.++.+|.++...|++++|+..|+++++++|+++.+|+.+|.++..+|++++|+.+|++|++++|++..++
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 88 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVH 88 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 4678899999999999999999999999999999999999999999999999999999999999987664
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.02 E-value=3.7e-10 Score=107.60 Aligned_cols=105 Identities=10% Similarity=-0.065 Sum_probs=93.5
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-----CcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCc----
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTM-----VSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---- 450 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-----~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~---- 450 (491)
..+..+.+.|..+...|+|++|+.+|++|+++.+. ....++.++|.+|.. |++++|+..|++|+++.|..
T Consensus 74 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~ 152 (307)
T 2ifu_A 74 HAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLR 152 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChh
Confidence 45778899999999999999999999999987432 124678999999999 99999999999999998764
Q ss_pred --hHHHHHHHHHHHHCCChHHHHHHHHHHHccccccc
Q 011184 451 --HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 451 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 485 (491)
..+++++|.+|..+|+|++|+..|++|+++.+++.
T Consensus 153 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 189 (307)
T 2ifu_A 153 QAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEME 189 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC
Confidence 67899999999999999999999999999988765
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=4.8e-10 Score=107.08 Aligned_cols=114 Identities=9% Similarity=-0.119 Sum_probs=106.2
Q ss_pred hhhhHHHHHhHHHHHHHHHHh-c-CHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChH--------HHHHHHHHHH
Q 011184 375 WTDQMQETLNSKKKGDVAFRQ-K-DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQ--------DALNDAMQAQ 444 (491)
Q Consensus 375 ~~~~~~~~~~~~~~g~~~~~~-~-~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~--------~A~~~~~~al 444 (491)
....+++..+|..++.++... + ++++++++++++|+.+|. +..+|+.|+.++..+|.++ ++++.++++|
T Consensus 116 L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpk-Ny~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I 194 (349)
T 3q7a_A 116 AVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPK-NYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEML 194 (349)
T ss_dssp HHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTT-CHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHH
T ss_pred HHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHH
Confidence 345667788999999999888 7 999999999999999999 9999999999999999988 9999999999
Q ss_pred hhCCCchHHHHHHHHHHHHCCC-------hHHHHHHHHHHHccccccccccc
Q 011184 445 IISPIWHIASYLQAAALSAMGM-------ENEAQVALKEGTTLEAKKNSTAG 489 (491)
Q Consensus 445 ~l~p~~~~a~~~~g~~~~~~~~-------~~~A~~~~~~al~l~~~~~~~~~ 489 (491)
+++|.|..||+++|.++..+++ +++++++++++++++|+|..+|.
T Consensus 195 ~~dp~N~SAW~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI~~~P~n~SaW~ 246 (349)
T 3q7a_A 195 RVDGRNNSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSIHLIPHNVSAWN 246 (349)
T ss_dssp HHCTTCHHHHHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHhCCCCHHHHH
Confidence 9999999999999999999997 79999999999999999999884
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=99.02 E-value=2.6e-09 Score=99.52 Aligned_cols=99 Identities=15% Similarity=0.094 Sum_probs=88.6
Q ss_pred HHHHHhHHHHHHHHHH----hcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHh----cCChHHHHHHHHHHHhhCCCc
Q 011184 379 MQETLNSKKKGDVAFR----QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIW 450 (491)
Q Consensus 379 ~~~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~l~p~~ 450 (491)
..++.+++.+|..+.. .+++++|++.|++|++.+ ++.+++++|.+|.. .+++++|+..|++|++++ +
T Consensus 35 ~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~ 109 (273)
T 1ouv_A 35 LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN---YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--Y 109 (273)
T ss_dssp TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--C
T ss_pred CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--C
Confidence 4566788999999999 999999999999999885 56888899999999 999999999999999884 8
Q ss_pred hHHHHHHHHHHHH----CCChHHHHHHHHHHHcccc
Q 011184 451 HIASYLQAAALSA----MGMENEAQVALKEGTTLEA 482 (491)
Q Consensus 451 ~~a~~~~g~~~~~----~~~~~~A~~~~~~al~l~~ 482 (491)
+.+++++|.+|.. .+++++|+++|++|+++++
T Consensus 110 ~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 145 (273)
T 1ouv_A 110 AEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLND 145 (273)
T ss_dssp HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcCc
Confidence 8999999999999 9999999999999998764
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=1.6e-09 Score=102.17 Aligned_cols=98 Identities=9% Similarity=-0.029 Sum_probs=91.2
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCc--hHHHHHHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW--HIASYLQA 458 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~--~~a~~~~g 458 (491)
........+..+.+.+++++|++.|+++++.+|+ +..+++++|.+|...|++++|+..|+++++++|++ ..++.++|
T Consensus 184 ~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~-~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~ 262 (287)
T 3qou_A 184 TRYQGLVAQIELLXQAADTPEIQQLQQQVAENPE-DAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQ 262 (287)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHH
T ss_pred hHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHH
Confidence 3445566677788999999999999999999999 99999999999999999999999999999999999 99999999
Q ss_pred HHHHHCCChHHHHHHHHHHHc
Q 011184 459 AALSAMGMENEAQVALKEGTT 479 (491)
Q Consensus 459 ~~~~~~~~~~~A~~~~~~al~ 479 (491)
.++..+|+.++|+..|++++.
T Consensus 263 ~~~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 263 EILAALGTGDALASXYRRQLY 283 (287)
T ss_dssp HHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHcCCCCcHHHHHHHHHH
Confidence 999999999999999999985
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.01 E-value=8.9e-10 Score=108.27 Aligned_cols=107 Identities=15% Similarity=0.083 Sum_probs=95.3
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-----cHHHHhhHHHHHHhcCChHHHHHHHHHHHh-----hC
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQI-----IS 447 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~-----l~ 447 (491)
....+..+...|..+...|+|++|++.|.+|+++.+.. ...++.++|.+|..+|++++|+..+++|++ .+
T Consensus 180 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~ 259 (383)
T 3ulq_A 180 NIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNI 259 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcc
Confidence 44567789999999999999999999999999875541 235799999999999999999999999999 46
Q ss_pred -CCchHHHHHHHHHHHHCCChHHHHHHHHHHHcccccc
Q 011184 448 -PIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 484 (491)
Q Consensus 448 -p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 484 (491)
|..+.+++++|.++..+|++++|++.|++|+++.++.
T Consensus 260 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 297 (383)
T 3ulq_A 260 LPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKA 297 (383)
T ss_dssp GGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc
Confidence 8889999999999999999999999999999986553
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.6e-09 Score=102.40 Aligned_cols=102 Identities=13% Similarity=-0.030 Sum_probs=93.8
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhC--
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA--------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS-- 447 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~-- 447 (491)
....+..+..+|..++..|++++|+..|++++++ .|. ...++.++|.+|...|++++|+..+++++++.
T Consensus 65 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 143 (311)
T 3nf1_A 65 HPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPA-VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREK 143 (311)
T ss_dssp SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChH-HHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 4667888999999999999999999999999987 344 67789999999999999999999999999885
Q ss_pred ------CCchHHHHHHHHHHHHCCChHHHHHHHHHHHcc
Q 011184 448 ------PIWHIASYLQAAALSAMGMENEAQVALKEGTTL 480 (491)
Q Consensus 448 ------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 480 (491)
|....+++++|.++..+|++++|++.|++++++
T Consensus 144 ~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 182 (311)
T 3nf1_A 144 VLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEI 182 (311)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred hcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 777889999999999999999999999999998
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.00 E-value=8.6e-10 Score=101.99 Aligned_cols=109 Identities=12% Similarity=-0.050 Sum_probs=95.0
Q ss_pred hhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-CcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhC--CC-chH
Q 011184 377 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTM-VSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS--PI-WHI 452 (491)
Q Consensus 377 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~--p~-~~~ 452 (491)
..+... ..+.+|..+++.|+|++|+..|++++...+. ....+++++|.++..+|++++|+..|++++.-. |. .+.
T Consensus 131 ~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~d 209 (282)
T 4f3v_A 131 AGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARA 209 (282)
T ss_dssp TTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHH
T ss_pred cCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHH
Confidence 344566 8899999999999999999999999876422 124589999999999999999999999998655 66 678
Q ss_pred HHHHHHHHHHHCCChHHHHHHHHHHHccccccccc
Q 011184 453 ASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 453 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
+++++|.++..+|+.++|...|++++.++|+ ..+
T Consensus 210 a~~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~ 243 (282)
T 4f3v_A 210 IAWYLAMARRSQGNESAAVALLEWLQTTHPE-PKV 243 (282)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHH
Confidence 9999999999999999999999999999998 554
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.00 E-value=8.4e-10 Score=87.01 Aligned_cols=76 Identities=11% Similarity=0.000 Sum_probs=71.2
Q ss_pred cCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHccccc--cccc
Q 011184 411 AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAK--KNST 487 (491)
Q Consensus 411 ~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~--~~~~ 487 (491)
++|+ +..++..+|.++...|++++|+..|+++++++|.+..+|+++|.++..+|++++|++.|+++++++|+ +..+
T Consensus 1 l~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 78 (112)
T 2kck_A 1 MVDQ-NPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDV 78 (112)
T ss_dssp CCCS-STTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHH
T ss_pred CCCC-cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHH
Confidence 4677 77889999999999999999999999999999999999999999999999999999999999999998 6544
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.00 E-value=9.3e-10 Score=97.24 Aligned_cols=110 Identities=12% Similarity=-0.058 Sum_probs=87.0
Q ss_pred hhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhc---CCC---CcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCc
Q 011184 377 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA---GTM---VSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW 450 (491)
Q Consensus 377 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~---~p~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~ 450 (491)
.....+..+...|..+...|++++|++.|.+++++ .++ ....++.++|.++..+|++++|+..+++++++.+..
T Consensus 61 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 140 (203)
T 3gw4_A 61 DHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQA 140 (203)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc
Confidence 34566778888999999999999999999999887 332 135568888999999999999999999998764321
Q ss_pred ------hHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccc
Q 011184 451 ------HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 486 (491)
Q Consensus 451 ------~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 486 (491)
..++.++|.++..+|++++|++.|++|+++..+...
T Consensus 141 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 182 (203)
T 3gw4_A 141 DDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAELED 182 (203)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred cchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCC
Confidence 345688999999999999999999999887765544
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=99.00 E-value=8.6e-10 Score=104.20 Aligned_cols=102 Identities=10% Similarity=-0.014 Sum_probs=87.1
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc-----HHHHhhHHHHHHhcCChHHHHHHHHHHHhh-------CCCch
Q 011184 384 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS-----PTVYARRSLCYLMSDMPQDALNDAMQAQII-------SPIWH 451 (491)
Q Consensus 384 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~-----~~~~~~~~~~~~~~~~~~~A~~~~~~al~l-------~p~~~ 451 (491)
.+...|..+...|+|++|+..|.+|+++.+... ..+++++|.+|..+|++++|+..|++|+++ .+..+
T Consensus 117 ~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 196 (293)
T 3u3w_A 117 WQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDV 196 (293)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHH
T ss_pred HHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHH
Confidence 444589999999999999999999998654411 346999999999999999999999999953 23446
Q ss_pred HHHHHHHHHHHHCCChHHHHHHHHHHHccccccc
Q 011184 452 IASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 452 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 485 (491)
.+|+++|.+|..+|+|++|++.|++|+++.++..
T Consensus 197 ~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~ 230 (293)
T 3u3w_A 197 KVRYNHAKALYLDSRYEESLYQVNKAIEISCRIN 230 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcC
Confidence 7999999999999999999999999999987653
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.99 E-value=8.8e-10 Score=85.46 Aligned_cols=68 Identities=15% Similarity=0.090 Sum_probs=64.9
Q ss_pred hhHHHHHHhcCChHHHHHHHHHHHhhCCCchH-HHHHHHHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 421 ARRSLCYLMSDMPQDALNDAMQAQIISPIWHI-ASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 421 ~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~-a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
+++|.++...|++++|+..|+++++++|+++. +|+++|.+|..+|++++|+++|++|++++|++..++
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 56889999999999999999999999999999 999999999999999999999999999999988765
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.7e-09 Score=106.13 Aligned_cols=106 Identities=11% Similarity=0.005 Sum_probs=95.3
Q ss_pred HHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCC-----CCcHHHHhhHHHHHHhcCChHHHHHHHHHHHh-----hCC
Q 011184 379 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGT-----MVSPTVYARRSLCYLMSDMPQDALNDAMQAQI-----ISP 448 (491)
Q Consensus 379 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p-----~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~-----l~p 448 (491)
...+..+...|..+...|+|++|++.|.+|+++.+ .....++.++|.+|..+|++++|+..+++|++ .+|
T Consensus 179 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~ 258 (378)
T 3q15_A 179 IRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPD 258 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGG
T ss_pred hhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCCh
Confidence 35678899999999999999999999999998633 22346789999999999999999999999999 788
Q ss_pred CchHHHHHHHHHHHHCCChHHHHHHHHHHHcccccc
Q 011184 449 IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 484 (491)
Q Consensus 449 ~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 484 (491)
..+.+++++|.++..+|++++|+..|++|+++.++.
T Consensus 259 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 294 (378)
T 3q15_A 259 LLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITAR 294 (378)
T ss_dssp GHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTT
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc
Confidence 889999999999999999999999999999987653
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.9e-09 Score=90.95 Aligned_cols=106 Identities=8% Similarity=0.038 Sum_probs=93.0
Q ss_pred HHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-----cHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCc---
Q 011184 379 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW--- 450 (491)
Q Consensus 379 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~--- 450 (491)
...+..+..+|..++..|+|++|++.|.+++++.+.. ...++.++|.++..+|++++|+..+++++++.+..
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 85 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDR 85 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc
Confidence 3567789999999999999999999999999875431 23578899999999999999999999999987654
Q ss_pred ---hHHHHHHHHHHHHCCChHHHHHHHHHHHcccccc
Q 011184 451 ---HIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 484 (491)
Q Consensus 451 ---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 484 (491)
..+++++|.++..+|++++|++.|++|+++.++.
T Consensus 86 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~ 122 (164)
T 3ro3_A 86 AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL 122 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHc
Confidence 6789999999999999999999999999886543
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=98.98 E-value=3.9e-10 Score=106.00 Aligned_cols=105 Identities=6% Similarity=-0.034 Sum_probs=90.3
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCch-----H
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH-----I 452 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~-----~ 452 (491)
.+.++..+.++|..+++.|+|++|+..|++|++++|+ +..+++++|.+|..+|++++|+..|+++++++|++. .
T Consensus 34 ~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~ 112 (281)
T 2c2l_A 34 NPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQ-SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDD 112 (281)
T ss_dssp CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCCSH
T ss_pred CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchhhHHHH
Confidence 4457889999999999999999999999999999999 899999999999999999999999999999999752 1
Q ss_pred H--------------------------HHHHHHHHHHCCChHHHHHHHHHHHccccccc
Q 011184 453 A--------------------------SYLQAAALSAMGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 453 a--------------------------~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 485 (491)
+ ...+|. +..|++++|++.|++|++++|.+.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~--l~~~~~~~A~~~~~~al~~~p~~~ 169 (281)
T 2c2l_A 113 IPSALRIAKKKRWNSIEERRIHQESELHSYLTR--LIAAERERELEECQRNHEGHEDDG 169 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHH--HHHHHHHHHHTTTSGGGTTTSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH--HHHHHHHHHHHHHHhhhccccchh
Confidence 1 111222 236899999999999999999764
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.97 E-value=2.4e-09 Score=101.93 Aligned_cols=105 Identities=16% Similarity=0.147 Sum_probs=95.5
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc---HHHHhhHHHHHHhcCChHHHHHHHHHHHhh------CCCch
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---PTVYARRSLCYLMSDMPQDALNDAMQAQII------SPIWH 451 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~l------~p~~~ 451 (491)
....++..|..++..|+|++|+..|+++++.+|++. ..++..+|.+|...|++++|+..+++++++ .|..+
T Consensus 4 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 83 (338)
T 3ro2_A 4 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEA 83 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHH
Confidence 456788999999999999999999999999999832 467889999999999999999999999988 56678
Q ss_pred HHHHHHHHHHHHCCChHHHHHHHHHHHccccccc
Q 011184 452 IASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 452 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 485 (491)
.+++.+|.++..+|++++|++.|++|+++.++..
T Consensus 84 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 117 (338)
T 3ro2_A 84 KASGNLGNTLKVLGNFDEAIVCCQRHLDISRELN 117 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhc
Confidence 8999999999999999999999999999987654
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.9e-09 Score=106.54 Aligned_cols=104 Identities=17% Similarity=0.155 Sum_probs=96.2
Q ss_pred HHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcH----HHHhhHHHHHHhcCChHHHHHHHHHHHhh------CC
Q 011184 379 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP----TVYARRSLCYLMSDMPQDALNDAMQAQII------SP 448 (491)
Q Consensus 379 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~al~l------~p 448 (491)
...+..++.+|..++..|+|++|+..|+++++++|+ +. .++.++|.+|..+|++++|+..|++++++ .|
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 123 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTE-DLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRL 123 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccc-ChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCch
Confidence 456778899999999999999999999999999998 54 57899999999999999999999999999 68
Q ss_pred CchHHHHHHHHHHHHCCChHHHHHHHHHHHccccc
Q 011184 449 IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAK 483 (491)
Q Consensus 449 ~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 483 (491)
....+++++|.+|..+|++++|+..|++|+++.++
T Consensus 124 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 158 (411)
T 4a1s_A 124 GEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQ 158 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999998543
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.97 E-value=9.9e-10 Score=110.86 Aligned_cols=108 Identities=12% Similarity=0.050 Sum_probs=92.1
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhc-------------------CChHHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMS-------------------DMPQDALN 438 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~-------------------~~~~~A~~ 438 (491)
.+..+..+..+|..+...|++++|++.|.+|++.+|+ +..++.++|.+|... +.+++|+.
T Consensus 243 ~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~ 321 (472)
T 4g1t_A 243 APGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPN-NAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVA 321 (472)
T ss_dssp CSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCC-hHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHH
Confidence 4456678889999999999999999999999999999 888888888887543 34677888
Q ss_pred HHHHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccc
Q 011184 439 DAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 486 (491)
Q Consensus 439 ~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 486 (491)
.++++++++|.+..+++++|.++..+|++++|++.|++|+++++++..
T Consensus 322 ~~~~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~~ 369 (472)
T 4g1t_A 322 HLKKADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPVA 369 (472)
T ss_dssp HHHHHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHHH
T ss_pred HHHHHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCChH
Confidence 888999999999889999999999999999999999999888876543
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=98.97 E-value=1.9e-09 Score=88.80 Aligned_cols=78 Identities=10% Similarity=0.014 Sum_probs=71.3
Q ss_pred hcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 410 DAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 410 ~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
..+|. .+..+..+|.++...|++++|+..|+++++++|+++.+|+++|.++..+|++++|+..|++|++++|++..++
T Consensus 3 ~~~~~-~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 80 (137)
T 3q49_B 3 HMKSP-SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAH 80 (137)
T ss_dssp ---CC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCccc-cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHH
Confidence 34566 7889999999999999999999999999999999999999999999999999999999999999999987654
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.6e-09 Score=106.52 Aligned_cols=104 Identities=10% Similarity=-0.047 Sum_probs=65.7
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------cHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCch--
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV------SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH-- 451 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~-- 451 (491)
..+..+..+|..++..|++++|+..|.+|+++.+.. ...+++++|.+|..+|++++|+..|++|+++.|...
T Consensus 141 ~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 220 (383)
T 3ulq_A 141 EKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQP 220 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCCh
Confidence 455666666666666667777777776666653321 234566666666666777777777777666654332
Q ss_pred ----HHHHHHHHHHHHCCChHHHHHHHHHHHccccc
Q 011184 452 ----IASYLQAAALSAMGMENEAQVALKEGTTLEAK 483 (491)
Q Consensus 452 ----~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 483 (491)
.+++++|.+|..+|++++|++.|++|+++.++
T Consensus 221 ~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 256 (383)
T 3ulq_A 221 QLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEE 256 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHh
Confidence 46666777777777777777777776665443
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.95 E-value=2.6e-09 Score=105.01 Aligned_cols=105 Identities=16% Similarity=0.147 Sum_probs=95.1
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc---HHHHhhHHHHHHhcCChHHHHHHHHHHHhh------CCCch
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---PTVYARRSLCYLMSDMPQDALNDAMQAQII------SPIWH 451 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~l------~p~~~ 451 (491)
.+..++.+|..++..|+|++|+..|+++++++|++. ..++..+|.+|...|++++|+..+++|+++ .|..+
T Consensus 8 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 87 (406)
T 3sf4_A 8 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEA 87 (406)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHH
Confidence 355788999999999999999999999999999832 367899999999999999999999999988 46668
Q ss_pred HHHHHHHHHHHHCCChHHHHHHHHHHHccccccc
Q 011184 452 IASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 452 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 485 (491)
.+++++|.++..+|++++|+..|++|+++.++..
T Consensus 88 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 121 (406)
T 3sf4_A 88 KASGNLGNTLKVLGNFDEAIVCCQRHLDISRELN 121 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcc
Confidence 8999999999999999999999999999987654
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=98.92 E-value=8.5e-09 Score=82.71 Aligned_cols=85 Identities=16% Similarity=0.164 Sum_probs=79.9
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHH
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 459 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (491)
.+...+...|..++..|++++|+..|+++++.+|. +...+.++|.++...|++++|+..++++++++|++..++..+|.
T Consensus 41 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 119 (125)
T 1na0_A 41 NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGN 119 (125)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 45678899999999999999999999999999999 88999999999999999999999999999999999999999999
Q ss_pred HHHHCC
Q 011184 460 ALSAMG 465 (491)
Q Consensus 460 ~~~~~~ 465 (491)
++..+|
T Consensus 120 ~~~~~g 125 (125)
T 1na0_A 120 AKQKQG 125 (125)
T ss_dssp HHHHHC
T ss_pred HHHhcc
Confidence 987764
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.91 E-value=2.2e-08 Score=83.25 Aligned_cols=81 Identities=11% Similarity=0.047 Sum_probs=76.5
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHH
Q 011184 382 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 461 (491)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (491)
...+..+|..++..|+|++|+..|+++++++|+ +..+++++|.++..+|++++|+..|+++++++|++..++..++.+.
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGG-DVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 788999999999999999999999999999999 8899999999999999999999999999999999999998888775
Q ss_pred HH
Q 011184 462 SA 463 (491)
Q Consensus 462 ~~ 463 (491)
..
T Consensus 144 ~~ 145 (148)
T 2dba_A 144 GP 145 (148)
T ss_dssp CS
T ss_pred hh
Confidence 43
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.90 E-value=1e-08 Score=81.36 Aligned_cols=84 Identities=8% Similarity=-0.063 Sum_probs=78.2
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 457 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (491)
.+.++..+...|..++..|+|++|+..|+++++.+|+ +..++.++|.++..+|++++|+..++++++++|++..++..+
T Consensus 34 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 112 (118)
T 1elw_A 34 DPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGL 112 (118)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 3446778999999999999999999999999999999 889999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 011184 458 AAALS 462 (491)
Q Consensus 458 g~~~~ 462 (491)
+.+..
T Consensus 113 ~~~~~ 117 (118)
T 1elw_A 113 QNMEA 117 (118)
T ss_dssp HHHHH
T ss_pred HHhhc
Confidence 88753
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.89 E-value=4.1e-09 Score=87.13 Aligned_cols=91 Identities=12% Similarity=0.011 Sum_probs=79.7
Q ss_pred cCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcC---ChHHHHHHHHHHHhhC-C-CchHHHHHHHHHHHHCCChHHH
Q 011184 396 KDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD---MPQDALNDAMQAQIIS-P-IWHIASYLQAAALSAMGMENEA 470 (491)
Q Consensus 396 ~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~al~l~-p-~~~~a~~~~g~~~~~~~~~~~A 470 (491)
+....+.+.|.+++..++. +..+.++.|.++.+.+ ++++|+..++.+++.+ | ++.+++|++|.+++++|+|++|
T Consensus 12 ~~l~~~~~~y~~e~~~~~~-~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A 90 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKA 90 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHHHHHHccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHH
Confidence 3457788888888888887 8888999999999988 6679999999999998 7 6689999999999999999999
Q ss_pred HHHHHHHHccccccccc
Q 011184 471 QVALKEGTTLEAKKNST 487 (491)
Q Consensus 471 ~~~~~~al~l~~~~~~~ 487 (491)
+++++++|+++|++..|
T Consensus 91 ~~y~~~lL~ieP~n~QA 107 (152)
T 1pc2_A 91 LKYVRGLLQTEPQNNQA 107 (152)
T ss_dssp HHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHhcCCCCHHH
Confidence 99999999999988655
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.89 E-value=7.6e-09 Score=96.31 Aligned_cols=101 Identities=20% Similarity=0.127 Sum_probs=90.2
Q ss_pred HHHhHHHHHHHHHH----hcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHh----cCChHHHHHHHHHHHhhCCCchH
Q 011184 381 ETLNSKKKGDVAFR----QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWHI 452 (491)
Q Consensus 381 ~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~l~p~~~~ 452 (491)
++..+...|..+.. .+++++|++.|+++++.+ ++.++.++|.+|.. .+++++|+..|+++++++| +.
T Consensus 145 ~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~--~~ 219 (273)
T 1ouv_A 145 DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLK---DSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN--GG 219 (273)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC--HH
T ss_pred cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCC--HH
Confidence 56678889999998 999999999999999884 45788899999999 9999999999999999976 78
Q ss_pred HHHHHHHHHHH----CCChHHHHHHHHHHHcccccccc
Q 011184 453 ASYLQAAALSA----MGMENEAQVALKEGTTLEAKKNS 486 (491)
Q Consensus 453 a~~~~g~~~~~----~~~~~~A~~~~~~al~l~~~~~~ 486 (491)
+++++|.+|.. .+++++|+++|++|++++|.+..
T Consensus 220 a~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~ 257 (273)
T 1ouv_A 220 GCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGAC 257 (273)
T ss_dssp HHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHcCCCcccCHHHHHHHHHHHHHcCCHHHH
Confidence 99999999999 99999999999999999987654
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.87 E-value=6.7e-09 Score=104.77 Aligned_cols=106 Identities=8% Similarity=-0.052 Sum_probs=90.0
Q ss_pred hhhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCC--cHHHHhhHHHHHHhcCChHHHHHHHHHHHhhC-
Q 011184 376 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA-----GTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQIIS- 447 (491)
Q Consensus 376 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~- 447 (491)
.+..+.+....+.+..+..+|+|++|+..|+++|++ .|++ ....++++|.+|..+|+|++|+..++++|++.
T Consensus 303 ~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~ 382 (490)
T 3n71_A 303 KEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYM 382 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 344556667778888899999999999999999954 3331 45679999999999999999999999999774
Q ss_pred -------CCchHHHHHHHHHHHHCCChHHHHHHHHHHHccc
Q 011184 448 -------PIWHIASYLQAAALSAMGMENEAQVALKEGTTLE 481 (491)
Q Consensus 448 -------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 481 (491)
|+-+..++++|.+|..+|+|++|+..|++|+++-
T Consensus 383 ~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~ 423 (490)
T 3n71_A 383 KLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAIL 423 (490)
T ss_dssp HHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 4446789999999999999999999999999864
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.86 E-value=1.5e-08 Score=77.54 Aligned_cols=72 Identities=14% Similarity=-0.091 Sum_probs=66.0
Q ss_pred CCCCcHHHHhhHHHHHHhcCC---hHHHHHHHHHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHcccccc
Q 011184 412 GTMVSPTVYARRSLCYLMSDM---PQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 484 (491)
Q Consensus 412 ~p~~~~~~~~~~~~~~~~~~~---~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 484 (491)
+|+ ++.++..+|.++...++ .++|...+++||+++|+++.+++.+|..++..|+|++|+..|+++++.+|.+
T Consensus 2 ~p~-~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 2 NAV-TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CCC-CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred CCC-CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 577 88999999999876555 7999999999999999999999999999999999999999999999999983
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.86 E-value=5.9e-09 Score=92.00 Aligned_cols=104 Identities=11% Similarity=0.019 Sum_probs=92.0
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHh------cCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhh---CC--
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFID------AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII---SP-- 448 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~------~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l---~p-- 448 (491)
..+..+...|..++..|+|++|+..|+++++ ..+. ...++.++|.+|..+|++++|+..+++++++ .+
T Consensus 24 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 102 (203)
T 3gw4_A 24 TASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTA-EHRALHQVGMVERMAGNWDAARRCFLEERELLASLPED 102 (203)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCcc
Confidence 3567889999999999999999999999998 4444 6778999999999999999999999999998 34
Q ss_pred --CchHHHHHHHHHHHHCCChHHHHHHHHHHHcccccc
Q 011184 449 --IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 484 (491)
Q Consensus 449 --~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 484 (491)
....+++++|.++..+|++++|+..|++|+++.++.
T Consensus 103 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 140 (203)
T 3gw4_A 103 PLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQA 140 (203)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc
Confidence 346789999999999999999999999999876543
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.85 E-value=1.1e-08 Score=91.69 Aligned_cols=101 Identities=13% Similarity=-0.010 Sum_probs=73.9
Q ss_pred HHHHhHHHHHHHHHHhc----CHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHh----cCChHHHHHHHHHHHhhCC--C
Q 011184 380 QETLNSKKKGDVAFRQK----DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISP--I 449 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~----~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~l~p--~ 449 (491)
.++.+++.+|..+.. + ++++|++.|++|++. . ++.+++++|.+|.. .+++++|+..|++|++..| .
T Consensus 48 g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~--g-~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~ 123 (212)
T 3rjv_A 48 GDGDALALLAQLKIR-NPQQADYPQARQLAEKAVEA--G-SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDA 123 (212)
T ss_dssp TCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHH
T ss_pred CCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcc
Confidence 456677777777776 5 777777777777543 3 56777777777776 6777888888888887777 4
Q ss_pred chHHHHHHHHHHHH----CCChHHHHHHHHHHHccccccc
Q 011184 450 WHIASYLQAAALSA----MGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 450 ~~~a~~~~g~~~~~----~~~~~~A~~~~~~al~l~~~~~ 485 (491)
++.+++++|.+|.. .+++++|+.+|++|+++ +.+.
T Consensus 124 ~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~ 162 (212)
T 3rjv_A 124 AVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTG 162 (212)
T ss_dssp HHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTT
T ss_pred hHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCH
Confidence 57788888888888 77788888888888776 4443
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=98.84 E-value=6.4e-09 Score=83.05 Aligned_cols=85 Identities=7% Similarity=-0.078 Sum_probs=72.7
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCc--hHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW--HIASY 455 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~--~~a~~ 455 (491)
.+.++..++.+|..++..|+|++|+..|+++++++|+ +..+|+++|.+|..+|++++|+..|+++++++|.. ..+..
T Consensus 15 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 93 (115)
T 2kat_A 15 GTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPT-YSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVK 93 (115)
T ss_dssp TCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHH
Confidence 3445678999999999999999999999999999999 88999999999999999999999999999999864 34444
Q ss_pred HHHHHHHH
Q 011184 456 LQAAALSA 463 (491)
Q Consensus 456 ~~g~~~~~ 463 (491)
.+...+..
T Consensus 94 ~l~~~l~~ 101 (115)
T 2kat_A 94 ELQVFLRR 101 (115)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444433
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.84 E-value=5.4e-09 Score=102.72 Aligned_cols=105 Identities=9% Similarity=0.042 Sum_probs=63.4
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-----cHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCc----
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---- 450 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~---- 450 (491)
..+..+...|..++..|+|++|++.|++++++.+.. ...++.++|.+|..+|++++|+..+++++++.|..
T Consensus 185 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 264 (406)
T 3sf4_A 185 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRA 264 (406)
T ss_dssp HHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCch
Confidence 344556666666666666666666666666554331 11256666666666666666666666666665554
Q ss_pred --hHHHHHHHHHHHHCCChHHHHHHHHHHHcccccc
Q 011184 451 --HIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 484 (491)
Q Consensus 451 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 484 (491)
..+++++|.++..+|++++|+..|++|+++.++.
T Consensus 265 ~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 300 (406)
T 3sf4_A 265 VEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL 300 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhc
Confidence 5566666666666666666666666666655443
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.83 E-value=2.3e-08 Score=78.46 Aligned_cols=79 Identities=14% Similarity=-0.027 Sum_probs=71.2
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcC-------CCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAG-------TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIA 453 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-------p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a 453 (491)
++...+..|..+++.|+|..|+..|++|++.. +. ...++.++|.+|.++|++++|+..+++|++++|++..+
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~-~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~ 82 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTID-KVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRA 82 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCccc-HHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHH
Confidence 35678999999999999999999999999853 23 67889999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 011184 454 SYLQAAA 460 (491)
Q Consensus 454 ~~~~g~~ 460 (491)
..+++..
T Consensus 83 ~~n~~~~ 89 (104)
T 2v5f_A 83 NGNLKYF 89 (104)
T ss_dssp HHHHHHH
T ss_pred HhhHHHH
Confidence 9988743
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.82 E-value=6.2e-09 Score=102.86 Aligned_cols=103 Identities=10% Similarity=0.020 Sum_probs=64.7
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcH------HHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCc---
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP------TVYARRSLCYLMSDMPQDALNDAMQAQIISPIW--- 450 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~------~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~--- 450 (491)
..+..+..+|..++..|+|++|++.|++++++.+. .. .++.++|.+|..+|++++|+..+++++++.|..
T Consensus 221 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 299 (411)
T 4a1s_A 221 AQGRACGNLGNTYYLLGDFQAAIEHHQERLRIARE-FGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGER 299 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCH
Confidence 34446666666666666666666666666665543 21 256666666666666666666666666666543
Q ss_pred ---hHHHHHHHHHHHHCCChHHHHHHHHHHHccccc
Q 011184 451 ---HIASYLQAAALSAMGMENEAQVALKEGTTLEAK 483 (491)
Q Consensus 451 ---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 483 (491)
..+++.+|.++..+|++++|++.|++|+++.++
T Consensus 300 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 335 (411)
T 4a1s_A 300 EVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQE 335 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 556666666666666666666666666666544
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.82 E-value=4.1e-08 Score=79.70 Aligned_cols=83 Identities=11% Similarity=-0.044 Sum_probs=73.9
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc---HHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHH
Q 011184 383 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 459 (491)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (491)
..++..|..++..|+|++|+..|+++++.+|+ + +.+++++|.+|..+|++++|+..|+++++.+|++..+...+..
T Consensus 40 ~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~ 118 (129)
T 2xev_A 40 NALYWLGESYYATRNFQLAEAQFRDLVSRYPT-HDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQER 118 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHH
Confidence 68899999999999999999999999999999 6 7889999999999999999999999999999999888776666
Q ss_pred HHHHCCC
Q 011184 460 ALSAMGM 466 (491)
Q Consensus 460 ~~~~~~~ 466 (491)
+....++
T Consensus 119 l~~l~~~ 125 (129)
T 2xev_A 119 LQSIRLG 125 (129)
T ss_dssp HHHHC--
T ss_pred HHHHHhh
Confidence 5544443
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.81 E-value=2e-08 Score=89.94 Aligned_cols=104 Identities=11% Similarity=-0.035 Sum_probs=92.5
Q ss_pred HHHHhHHHHHHHHHH----hcCHHHHHHHHHHHHhcCCC-CcHHHHhhHHHHHHh----cCChHHHHHHHHHHHhhCCCc
Q 011184 380 QETLNSKKKGDVAFR----QKDLKDAIECYTQFIDAGTM-VSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIW 450 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~l~p~~ 450 (491)
.++.+++.+|..+.. .+++++|++.|++|++..|. ..+.+++++|.+|.. .+++++|+..|++|+++ |.+
T Consensus 83 g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~ 161 (212)
T 3rjv_A 83 GSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRT 161 (212)
T ss_dssp TCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCT
T ss_pred CCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCC
Confidence 467788999999988 89999999999999999983 157899999999999 88999999999999999 788
Q ss_pred hHHHHHHHHHHHHC-C-----ChHHHHHHHHHHHcccccc
Q 011184 451 HIASYLQAAALSAM-G-----MENEAQVALKEGTTLEAKK 484 (491)
Q Consensus 451 ~~a~~~~g~~~~~~-~-----~~~~A~~~~~~al~l~~~~ 484 (491)
+.+++++|.+|... | ++++|+.+|++|++.....
T Consensus 162 ~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~~~ 201 (212)
T 3rjv_A 162 GYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGFDT 201 (212)
T ss_dssp THHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCCHH
Confidence 89999999999864 3 9999999999999875443
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.80 E-value=1.4e-08 Score=99.41 Aligned_cols=107 Identities=12% Similarity=-0.002 Sum_probs=77.1
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC------CcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCC---
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTM------VSPTVYARRSLCYLMSDMPQDALNDAMQAQIISP--- 448 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~------~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p--- 448 (491)
....+..+...|..++..|++++|+..|.+|+++.+. ....+++++|.+|..+|++++|++.|++|+++.+
T Consensus 137 ~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~ 216 (378)
T 3q15_A 137 DIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQ 216 (378)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcC
Confidence 3456677777888888888888888888888765432 1244677788888888888888888888877643
Q ss_pred ---CchHHHHHHHHHHHHCCChHHHHHHHHHHHcccccc
Q 011184 449 ---IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 484 (491)
Q Consensus 449 ---~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 484 (491)
..+.+++++|.+|..+|++++|++.|++|+++..+.
T Consensus 217 ~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~ 255 (378)
T 3q15_A 217 NDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREK 255 (378)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh
Confidence 224577788888888888888888888887765544
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=1.6e-08 Score=100.39 Aligned_cols=98 Identities=10% Similarity=-0.103 Sum_probs=81.6
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCC--cHHHHhhHHHHHHhcCChHHHHHHHHHHHhhC--------C
Q 011184 384 NSKKKGDVAFRQKDLKDAIECYTQFIDA-----GTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQIIS--------P 448 (491)
Q Consensus 384 ~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~--------p 448 (491)
.....+......|+|++|+..|+++|++ .|++ ....++++|.+|..+|+|++|+..|+++|++. |
T Consensus 300 ~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp 379 (433)
T 3qww_A 300 NVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSL 379 (433)
T ss_dssp HHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCH
T ss_pred HHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCCh
Confidence 3344445555678999999999999963 4441 45669999999999999999999999999774 4
Q ss_pred CchHHHHHHHHHHHHCCChHHHHHHHHHHHccc
Q 011184 449 IWHIASYLQAAALSAMGMENEAQVALKEGTTLE 481 (491)
Q Consensus 449 ~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 481 (491)
+-+..++++|.+|..+|+|++|+..|++|+++-
T Consensus 380 ~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~ 412 (433)
T 3qww_A 380 NVASMWLKLGRLYMGLENKAAGEKALKKAIAIM 412 (433)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 456789999999999999999999999999874
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.7e-08 Score=96.02 Aligned_cols=105 Identities=12% Similarity=0.102 Sum_probs=87.4
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-----cHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCc----
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---- 450 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~---- 450 (491)
..+..+...|..+...|++++|++.|++++++.+.. ...++.++|.++..+|++++|+..+++++++.|..
T Consensus 221 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 300 (338)
T 3ro2_A 221 AERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRI 300 (338)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcH
Confidence 345588899999999999999999999999876651 15678899999999999999999999999887654
Q ss_pred --hHHHHHHHHHHHHCCChHHHHHHHHHHHcccccc
Q 011184 451 --HIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 484 (491)
Q Consensus 451 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 484 (491)
..+++.+|.+|..+|++++|+..|++|+++.++.
T Consensus 301 ~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 336 (338)
T 3ro2_A 301 GEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREV 336 (338)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhh
Confidence 5589999999999999999999999999987764
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=98.75 E-value=7.7e-08 Score=91.71 Aligned_cols=74 Identities=14% Similarity=0.107 Sum_probs=62.1
Q ss_pred hcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHccccccc
Q 011184 410 DAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 410 ~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 485 (491)
..+|. .+.+|..++..+...|++++|+..+++|+.++|+ ..+|..+|.++...|++++|++.|.+|+.++|...
T Consensus 271 ~~~~~-~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 271 PELNN-LSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp GGGTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred ccCCc-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 34444 4455555666666689999999999999999985 67899999999999999999999999999999764
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=4.6e-08 Score=97.19 Aligned_cols=100 Identities=12% Similarity=0.014 Sum_probs=84.5
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCC--cHHHHhhHHHHHHhcCChHHHHHHHHHHHhhC-------
Q 011184 382 TLNSKKKGDVAFRQKDLKDAIECYTQFIDA-----GTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQIIS------- 447 (491)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~------- 447 (491)
+....+....+.++|+|++|++.|++++++ .|++ ....++++|.+|..+|+|++|+..++++|++.
T Consensus 287 ~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~ 366 (429)
T 3qwp_A 287 VQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGS 366 (429)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCC
Confidence 445566667788999999999999999964 3331 34679999999999999999999999999764
Q ss_pred -CCchHHHHHHHHHHHHCCChHHHHHHHHHHHccc
Q 011184 448 -PIWHIASYLQAAALSAMGMENEAQVALKEGTTLE 481 (491)
Q Consensus 448 -p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 481 (491)
|+-+..++++|.+|..+|+|++|+..|++|+++-
T Consensus 367 Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~ 401 (429)
T 3qwp_A 367 HPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIM 401 (429)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 3446689999999999999999999999999864
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.66 E-value=6.7e-08 Score=99.25 Aligned_cols=106 Identities=8% Similarity=-0.098 Sum_probs=81.5
Q ss_pred hHHHHHhHHHHHHHHHH-------hcCHH-------HHHHHHHHHHh-cCCCCcHHHHhhHHHHHHhcCChHHHHHHHHH
Q 011184 378 QMQETLNSKKKGDVAFR-------QKDLK-------DAIECYTQFID-AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQ 442 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~-------~~~~~-------~A~~~~~~al~-~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 442 (491)
.+.++..|+..|..+.+ .|+++ +|+..|++|++ ++|+ +..+|...+..+...|++++|...|++
T Consensus 268 ~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~-~~~l~~~~~~~~~~~g~~~~A~~~~~~ 346 (530)
T 2ooe_A 268 LGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKK-NMLLYFAYADYEESRMKYEKVHSIYNR 346 (530)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSS-CHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 44567777788877765 67776 78888888886 7887 778888888888888888888888888
Q ss_pred HHhhCCCch-HHHHHHHHHHHHCCChHHHHHHHHHHHcccccc
Q 011184 443 AQIISPIWH-IASYLQAAALSAMGMENEAQVALKEGTTLEAKK 484 (491)
Q Consensus 443 al~l~p~~~-~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 484 (491)
+++++|.++ .+|..+|.++...|++++|++.|++|++..|.+
T Consensus 347 al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~ 389 (530)
T 2ooe_A 347 LLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTR 389 (530)
T ss_dssp HHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCC
T ss_pred HhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCc
Confidence 888888774 578888887777777777777777777766543
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=1.1e-07 Score=90.31 Aligned_cols=134 Identities=13% Similarity=0.062 Sum_probs=92.2
Q ss_pred cccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCC---CcceEEeEee-cCCeeEEEEecCCC
Q 011184 62 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNN---RLTNLLGCCC-EGDERLLVAEYMPN 137 (491)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~~~~~~~-~~~~~~lv~e~~~~ 137 (491)
+..++.|....||+. |..+++|+.... .....+.+|+.+|+.|.+. .+.+++.++. ..+..++|||+++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~~--~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKSQ--QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCCc--hHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 345677888889887 567888985321 1245788999999999642 3667777764 45567899999999
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------------------
Q 011184 138 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG------------------------------------------ 175 (491)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~------------------------------------------ 175 (491)
.+|.+... ..++......++.++...|..||+..
T Consensus 98 ~~l~~~~~----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 98 QILGEDGM----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp EECHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred eECchhhh----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 88876321 12344445555555555555555321
Q ss_pred -----------------CcccccccccceeeCC---CCC-eEEccCCCccc
Q 011184 176 -----------------RALYHDLNAYRILFDE---DGN-PRLSTFGLMKN 205 (491)
Q Consensus 176 -----------------~iiH~Dlkp~Nill~~---~~~-~kl~Dfgla~~ 205 (491)
.++|+|++|.|||++. ++. +.|+||+.+..
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1589999999999987 455 48999997754
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.65 E-value=1.7e-07 Score=77.61 Aligned_cols=91 Identities=11% Similarity=-0.062 Sum_probs=83.9
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHh----cCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHH
Q 011184 388 KGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 463 (491)
Q Consensus 388 ~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~ 463 (491)
+|..+...+.+++|++.|++|.+. . ++.+.+++|.+|.. .+++++|+..|++|.+. .++.+++++|.+|..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g-~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--N-SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--C-CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 888898989999999999999998 3 67899999999998 89999999999999987 789999999999999
Q ss_pred ----CCChHHHHHHHHHHHccccc
Q 011184 464 ----MGMENEAQVALKEGTTLEAK 483 (491)
Q Consensus 464 ----~~~~~~A~~~~~~al~l~~~ 483 (491)
.+++++|+.+|++|.+....
T Consensus 106 G~g~~~d~~~A~~~~~~Aa~~g~~ 129 (138)
T 1klx_A 106 GKGVVKNEKQAVKTFEKACRLGSE 129 (138)
T ss_dssp TSSSCCCHHHHHHHHHHHHHTTCH
T ss_pred CCCCCcCHHHHHHHHHHHHHCCCH
Confidence 99999999999999987543
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=98.65 E-value=4.7e-08 Score=79.06 Aligned_cols=86 Identities=15% Similarity=0.082 Sum_probs=77.3
Q ss_pred HHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc-------HHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCch
Q 011184 379 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS-------PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH 451 (491)
Q Consensus 379 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~-------~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~ 451 (491)
+.++..+...|..++..|+|++|+..|+++++.+|+ + ..++.++|.+|..+|++++|+..|++++++.| +.
T Consensus 35 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~ 112 (131)
T 1elr_A 35 PTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRE-NREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TP 112 (131)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CH
T ss_pred CccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccc-cchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CH
Confidence 345778899999999999999999999999999887 5 78899999999999999999999999999999 68
Q ss_pred HHHHHHHHHHHHCCC
Q 011184 452 IASYLQAAALSAMGM 466 (491)
Q Consensus 452 ~a~~~~g~~~~~~~~ 466 (491)
..+..++.++..+++
T Consensus 113 ~~~~~l~~~~~~~~~ 127 (131)
T 1elr_A 113 DVLKKCQQAEKILKE 127 (131)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 889999888776544
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.61 E-value=1.3e-07 Score=97.04 Aligned_cols=102 Identities=15% Similarity=0.007 Sum_probs=77.8
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHH-HHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHH
Q 011184 383 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSL-CYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 461 (491)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~-~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (491)
..|...|..+.+.|++++|++.|++|++..|. ....+...+. .+...|++++|...|+++++++|+++.+|..+|.++
T Consensus 357 ~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~-~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~ 435 (530)
T 2ooe_A 357 LVYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYL 435 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC-CTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhccCC-chHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 46777777777777888888888888877776 4444444333 344678888888888888888888888888888888
Q ss_pred HHCCChHHHHHHHHHHHccccccc
Q 011184 462 SAMGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 462 ~~~~~~~~A~~~~~~al~l~~~~~ 485 (491)
..+|++++|...|++|++..|.+.
T Consensus 436 ~~~g~~~~Ar~~~~~al~~~~~~~ 459 (530)
T 2ooe_A 436 SHLNEDNNTRVLFERVLTSGSLPP 459 (530)
T ss_dssp TTTTCHHHHHHHHHHHHHSCCSCG
T ss_pred HhCCCHhhHHHHHHHHHhccCCCH
Confidence 888888888888888888765543
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.56 E-value=1.7e-07 Score=91.35 Aligned_cols=101 Identities=14% Similarity=-0.000 Sum_probs=87.4
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHHhcC--------CCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCC-----
Q 011184 383 LNSKKKGDVAFRQKDLKDAIECYTQFIDAG--------TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPI----- 449 (491)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~----- 449 (491)
..+...|..++..|+|++|+..|++++++. |. ...++.++|.++...|++++|+..+++++++.|.
T Consensus 94 ~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 172 (373)
T 1hz4_A 94 WSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPM-HEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQ 172 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGG
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHH
Confidence 346789999999999999999999999765 33 4567888999999999999999999999999875
Q ss_pred chHHHHHHHHHHHHCCChHHHHHHHHHHHcccccc
Q 011184 450 WHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 484 (491)
Q Consensus 450 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 484 (491)
...++.++|.++...|++++|...+++++.+.+..
T Consensus 173 ~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~ 207 (373)
T 1hz4_A 173 QLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNG 207 (373)
T ss_dssp GHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcc
Confidence 35689999999999999999999999999886553
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.55 E-value=1.7e-07 Score=86.69 Aligned_cols=97 Identities=16% Similarity=0.104 Sum_probs=85.5
Q ss_pred HhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCc--hHHHHHHHHH
Q 011184 383 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW--HIASYLQAAA 460 (491)
Q Consensus 383 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~--~~a~~~~g~~ 460 (491)
......+..+...|+|++|.+.|+.++..+|. .. ..+.+|.++.+.+++++|+..++++++..+.. ..+++++|.+
T Consensus 103 dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~-~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~a 180 (282)
T 4f3v_A 103 AITMGFAACEAAQGNYADAMEALEAAPVAGSE-HL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVA 180 (282)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCH-HH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCc-hH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHH
Confidence 45566788899999999999999999999998 66 88899999999999999999999998864332 4699999999
Q ss_pred HHHCCChHHHHHHHHHHHccc
Q 011184 461 LSAMGMENEAQVALKEGTTLE 481 (491)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~l~ 481 (491)
+..+|++++|+.+|++++.-.
T Consensus 181 l~~LG~~~eAl~~l~~a~~g~ 201 (282)
T 4f3v_A 181 AANLALFTEAERRLTEANDSP 201 (282)
T ss_dssp HHHTTCHHHHHHHHHHHHTST
T ss_pred HHHCCCHHHHHHHHHHHhcCC
Confidence 999999999999999998543
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.55 E-value=3.5e-07 Score=89.07 Aligned_cols=99 Identities=15% Similarity=0.150 Sum_probs=52.4
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhC------
Q 011184 382 TLNSKKKGDVAFRQKDLKDAIECYTQFIDA--------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS------ 447 (491)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~------ 447 (491)
+..+...|..++..|++++|++.|++++++ .-- .++.++|.++...|++++|+..|++++++.
T Consensus 53 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~---~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~ 129 (373)
T 1hz4_A 53 IVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYAL---WSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLE 129 (373)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHH---HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccc
Confidence 344555555555555555555555555431 111 233445555555555555555555555543
Q ss_pred --CCchHHHHHHHHHHHHCCChHHHHHHHHHHHccccc
Q 011184 448 --PIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAK 483 (491)
Q Consensus 448 --p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 483 (491)
|....++.++|.++..+|++++|...+++++++.++
T Consensus 130 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 130 QLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp TSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred cCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 233445555555555555555555555555555443
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=4e-07 Score=84.72 Aligned_cols=126 Identities=17% Similarity=0.060 Sum_probs=88.7
Q ss_pred cEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccC-CCCcceEEeEeecCCeeEEEEecCCCCCHHHHhcccC
Q 011184 71 NVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWE 148 (491)
Q Consensus 71 g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 148 (491)
+.||+... .++..+++|+-... ....+.+|...|+.+. +--+.++++++..++..++|||+++|.++.+....
T Consensus 39 ~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~~~-- 113 (272)
T 4gkh_A 39 ATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEE-- 113 (272)
T ss_dssp CEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHHHH--
T ss_pred CeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccccC--
Confidence 46898774 34678999986532 2456889999999884 44578899999999999999999999888765421
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhC------------------------------------------------------
Q 011184 149 THPMKWAMRLRVVLHLAQALEYCTSK------------------------------------------------------ 174 (491)
Q Consensus 149 ~~~l~~~~~~~i~~qi~~~L~~LH~~------------------------------------------------------ 174 (491)
.......+..++...|..||..
T Consensus 114 ----~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 189 (272)
T 4gkh_A 114 ----YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPF 189 (272)
T ss_dssp ----CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCC
T ss_pred ----CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccc
Confidence 0111223344444444444421
Q ss_pred -C--CcccccccccceeeCCCCCeEEccCCCccc
Q 011184 175 -G--RALYHDLNAYRILFDEDGNPRLSTFGLMKN 205 (491)
Q Consensus 175 -~--~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 205 (491)
. .++|+|+.+.|||++.++.+-|+||+.+..
T Consensus 190 ~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 190 SPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp CCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 0 168999999999999877778999998653
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=3.8e-07 Score=83.39 Aligned_cols=88 Identities=11% Similarity=0.024 Sum_probs=79.7
Q ss_pred CHHHHHHHHHHHHhcCCCC-cHHHHhhHHHHHHhc-----CChHHHHHHHHHHHhhCCCc-hHHHHHHHHHHHH-CCChH
Q 011184 397 DLKDAIECYTQFIDAGTMV-SPTVYARRSLCYLMS-----DMPQDALNDAMQAQIISPIW-HIASYLQAAALSA-MGMEN 468 (491)
Q Consensus 397 ~~~~A~~~~~~al~~~p~~-~~~~~~~~~~~~~~~-----~~~~~A~~~~~~al~l~p~~-~~a~~~~g~~~~~-~~~~~ 468 (491)
....|...+++||++||+. +..+|..+|..|.+. |+.++|.++|++||+++|+. ..+++..|..+.. +|+++
T Consensus 178 ~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~ 257 (301)
T 3u64_A 178 TVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRA 257 (301)
T ss_dssp HHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHH
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHH
Confidence 3688999999999999982 345899999999995 99999999999999999975 9999999999988 59999
Q ss_pred HHHHHHHHHHcccccc
Q 011184 469 EAQVALKEGTTLEAKK 484 (491)
Q Consensus 469 ~A~~~~~~al~l~~~~ 484 (491)
+|.+.+++|+..+|..
T Consensus 258 ~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 258 GFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHHcCCCCC
Confidence 9999999999999884
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=2.9e-07 Score=89.46 Aligned_cols=80 Identities=5% Similarity=-0.048 Sum_probs=57.0
Q ss_pred cccC-CCCCccEEEEEEEC-------CCCEEEEEEeCCCC---CCChhHHHHHHHHHhccC-C--CCcceEEeEeecC--
Q 011184 62 VSEH-GEKAPNVVYKGKLE-------NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLR-N--NRLTNLLGCCCEG-- 125 (491)
Q Consensus 62 i~~l-G~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-H--~niv~~~~~~~~~-- 125 (491)
+..+ +.|..+.+|+.... ++..+++|...... ......+.+|+.+++.|. + -.+++++.++...
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3455 77888999988764 26688999865432 112346889999999984 3 3578888887665
Q ss_pred -CeeEEEEecCCCCCHH
Q 011184 126 -DERLLVAEYMPNETLA 141 (491)
Q Consensus 126 -~~~~lv~e~~~~gsL~ 141 (491)
+..++||||++|.++.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 3568999999987654
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.46 E-value=6.8e-07 Score=90.74 Aligned_cols=99 Identities=13% Similarity=0.000 Sum_probs=87.6
Q ss_pred HHHHhHHHHHHHHHHhc---CHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHh----cCChHHHHHHHHHHHhhCCCchH
Q 011184 380 QETLNSKKKGDVAFRQK---DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWHI 452 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~l~p~~~~ 452 (491)
.++.+++.+|..++..| ++++|++.|++|++. . ++.+++++|.+|.. .+++++|+..|++|++.. ++.
T Consensus 326 ~~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~-~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~ 400 (490)
T 2xm6_A 326 GDATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--G-EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSA 400 (490)
T ss_dssp TCHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHH
T ss_pred CCHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHH
Confidence 35667888999998855 899999999999987 3 67889999999999 899999999999999864 689
Q ss_pred HHHHHHHHHHH----CCChHHHHHHHHHHHccccc
Q 011184 453 ASYLQAAALSA----MGMENEAQVALKEGTTLEAK 483 (491)
Q Consensus 453 a~~~~g~~~~~----~~~~~~A~~~~~~al~l~~~ 483 (491)
+++++|.+|.. .+++++|+.+|++|++.+|+
T Consensus 401 a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~ 435 (490)
T 2xm6_A 401 AQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMN 435 (490)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCC
Confidence 99999999998 89999999999999999843
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.45 E-value=3.2e-07 Score=92.46 Aligned_cols=105 Identities=9% Similarity=-0.032 Sum_probs=89.9
Q ss_pred hhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCC--cHHHHhhHHHHHHhcCChHHHHHHHHHHHhhC--
Q 011184 377 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA-----GTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQIIS-- 447 (491)
Q Consensus 377 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~-- 447 (491)
+.+..+..+.++|.+|..+|+|++|+..|+++|++ .|++ ....++|+|.+|..+|++++|+..|++|+++.
T Consensus 346 ~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~ 425 (490)
T 3n71_A 346 TNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLV 425 (490)
T ss_dssp TSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 34577889999999999999999999999999853 3331 55679999999999999999999999999764
Q ss_pred ---CCc---hHHHHHHHHHHHHCCChHHHHHHHHHHHccc
Q 011184 448 ---PIW---HIASYLQAAALSAMGMENEAQVALKEGTTLE 481 (491)
Q Consensus 448 ---p~~---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 481 (491)
|++ .+...+++.++.++++|++|...|.+|.+-.
T Consensus 426 ~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 426 THGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp HTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555 5677899999999999999999999987543
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.40 E-value=8.1e-07 Score=89.22 Aligned_cols=97 Identities=9% Similarity=0.024 Sum_probs=76.1
Q ss_pred HHHhHHHHHHHHHHhc---CHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhc----CChHHHHHHHHHHHhhCCCchHH
Q 011184 381 ETLNSKKKGDVAFRQK---DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMS----DMPQDALNDAMQAQIISPIWHIA 453 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~----~~~~~A~~~~~~al~l~p~~~~a 453 (491)
++.+++.+|..+...| ++++|++.|++|++.+|. ....++++|.+|... +++++|+..|+++. |.++.+
T Consensus 175 ~~~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~-~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a 250 (452)
T 3e4b_A 175 TDICYVELATVYQKKQQPEQQAELLKQMEAGVSRGTV-TAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPAS 250 (452)
T ss_dssp CTTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCS-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHH
T ss_pred CHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHH
Confidence 3447788888888888 888888888888888887 667667788887665 67888888888887 788888
Q ss_pred HHHHHHH-H--HHCCChHHHHHHHHHHHccc
Q 011184 454 SYLQAAA-L--SAMGMENEAQVALKEGTTLE 481 (491)
Q Consensus 454 ~~~~g~~-~--~~~~~~~~A~~~~~~al~l~ 481 (491)
++++|.+ + ...+++++|+++|++|++.+
T Consensus 251 ~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g 281 (452)
T 3e4b_A 251 WVSLAQLLYDFPELGDVEQMMKYLDNGRAAD 281 (452)
T ss_dssp HHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC
Confidence 8888887 4 46788888888888887554
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.40 E-value=1.1e-06 Score=68.69 Aligned_cols=71 Identities=10% Similarity=-0.197 Sum_probs=63.7
Q ss_pred HHHHhhHHHHHHhcCChHHHHHHHHHHHhhC-------CCchHHHHHHHHHHHHCCChHHHHHHHHHHHccccccccc
Q 011184 417 PTVYARRSLCYLMSDMPQDALNDAMQAQIIS-------PIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~-------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
+.-.+.+|..+...++|..|+.-|++|++.. +..+.++.++|.+++++|++++|+..+++|++++|++..+
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~ 82 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRA 82 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHH
Confidence 3445788999999999999999999999874 3568899999999999999999999999999999998765
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=4.1e-06 Score=82.50 Aligned_cols=96 Identities=11% Similarity=0.050 Sum_probs=58.9
Q ss_pred ccccCHHHHHHHhcC---Ccc--ccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCC-------CChhHHHHHHHHH
Q 011184 41 FREFTLEQLKNATSG---FAV--ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW-------PDPRQFLEEARSV 107 (491)
Q Consensus 41 ~~~~~~~~~~~~~~~---~~~--~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l 107 (491)
+..++.+++...... |.. .-.+..+|.|..+.||++... +++.++||....... .....+..|++++
T Consensus 9 ~~~l~~~~v~~~l~~~~~~~~~~~~~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L 88 (397)
T 2olc_A 9 YETLNESSAVALAVKLGLFPSKSTLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSAL 88 (397)
T ss_dssp CCCCCHHHHHHHHHHTTC-----CCEEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHH
T ss_pred cccCCHHHHHHHHHhcCcCCCCCceEEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHH
Confidence 344555555554332 221 123567899999999999743 468899998653211 1245678899999
Q ss_pred hccCC--C-CcceEEeEeecCCeeEEEEecCCCC
Q 011184 108 GQLRN--N-RLTNLLGCCCEGDERLLVAEYMPNE 138 (491)
Q Consensus 108 ~~l~H--~-niv~~~~~~~~~~~~~lv~e~~~~g 138 (491)
+.+.. | .+++++.+. .+..++|||+++|.
T Consensus 89 ~~l~~~~~~~vP~~~~~d--~~~~~lvmE~l~g~ 120 (397)
T 2olc_A 89 IRQGEHVPHLVPRVFYSD--TEMAVTVMEDLSHL 120 (397)
T ss_dssp HHHHTTCGGGSCCEEEEE--TTTTEEEECCCTTS
T ss_pred HHhhhhCCCCcCeEEEEc--CCccEEEEEeCCCc
Confidence 98842 3 345666543 34568999999863
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.36 E-value=1.2e-06 Score=66.73 Aligned_cols=70 Identities=7% Similarity=-0.090 Sum_probs=64.1
Q ss_pred HHHHhHHHHHHHHHHhcC---HHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCc
Q 011184 380 QETLNSKKKGDVAFRQKD---LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW 450 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~---~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~ 450 (491)
.++..+...|.+++..++ .++|...+++||+++|+ ++.+...+|..+.+.|+|++|+..++++++.+|..
T Consensus 4 ~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~-~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 4 VTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPY-NEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred CCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 356788899999976655 79999999999999999 99999999999999999999999999999999984
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.32 E-value=1.2e-06 Score=72.27 Aligned_cols=82 Identities=12% Similarity=-0.012 Sum_probs=73.2
Q ss_pred HHHHhHHHHHHHHHHhc---CHHHHHHHHHHHHhcC-CCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHH
Q 011184 380 QETLNSKKKGDVAFRQK---DLKDAIECYTQFIDAG-TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 455 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~---~~~~A~~~~~~al~~~-p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 455 (491)
.+.++.++.|..+.+.+ ++++|+..++..++.+ |.....+++++|..|.++|+|++|+.+++++|+++|+|.+|..
T Consensus 30 ~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~ 109 (152)
T 1pc2_A 30 VSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKE 109 (152)
T ss_dssp CCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHH
Confidence 46788999999999987 8889999999999999 7436889999999999999999999999999999999999887
Q ss_pred HHHHHH
Q 011184 456 LQAAAL 461 (491)
Q Consensus 456 ~~g~~~ 461 (491)
-+-.+-
T Consensus 110 Lk~~ie 115 (152)
T 1pc2_A 110 LERLID 115 (152)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 765544
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.30 E-value=4.6e-06 Score=84.54 Aligned_cols=97 Identities=11% Similarity=-0.079 Sum_probs=86.1
Q ss_pred HHHHhHHHHHHHHHH----hcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHh----cCChHHHHHHHHHHHhhCCCch
Q 011184 380 QETLNSKKKGDVAFR----QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWH 451 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~l~p~~~ 451 (491)
.++.+++.+|..++. .+++++|++.|++|++.+ ++.+++++|.+|.. .+++++|+..|++|++. .++
T Consensus 73 ~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~---~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~ 147 (490)
T 2xm6_A 73 GYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALKG---LPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRD 147 (490)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCH
T ss_pred CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCH
Confidence 567889999999999 999999999999998864 56888899999998 88999999999999876 578
Q ss_pred HHHHHHHHHHHH----CCChHHHHHHHHHHHccc
Q 011184 452 IASYLQAAALSA----MGMENEAQVALKEGTTLE 481 (491)
Q Consensus 452 ~a~~~~g~~~~~----~~~~~~A~~~~~~al~l~ 481 (491)
.+++++|.+|.. .+++++|+++|++|++.+
T Consensus 148 ~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~~ 181 (490)
T 2xm6_A 148 SGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQG 181 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC
Confidence 999999999998 889999999999998763
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.26 E-value=3.4e-06 Score=69.64 Aligned_cols=79 Identities=18% Similarity=0.030 Sum_probs=71.0
Q ss_pred hcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHH----CCChHHH
Q 011184 395 QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA----MGMENEA 470 (491)
Q Consensus 395 ~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~----~~~~~~A 470 (491)
.+|+++|++.|++|.+.... .. . +|.+|...+.+++|+..|++|.+. .++.+++++|.+|.. .+++++|
T Consensus 8 ~~d~~~A~~~~~~aa~~g~~-~a--~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A 80 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNEM-FG--C--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKA 80 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCT-TH--H--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHH
T ss_pred ccCHHHHHHHHHHHHcCCCH-hh--h--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHH
Confidence 35789999999999998755 32 2 899999989999999999999998 789999999999999 8999999
Q ss_pred HHHHHHHHcc
Q 011184 471 QVALKEGTTL 480 (491)
Q Consensus 471 ~~~~~~al~l 480 (491)
+++|++|.+.
T Consensus 81 ~~~~~~Aa~~ 90 (138)
T 1klx_A 81 AQYYSKACGL 90 (138)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHcC
Confidence 9999999976
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=98.21 E-value=5.2e-06 Score=65.98 Aligned_cols=92 Identities=12% Similarity=0.029 Sum_probs=73.8
Q ss_pred hcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHH---HHHHHHHHHhhC-C-CchHHHHHHHHHHHHCCChHH
Q 011184 395 QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQD---ALNDAMQAQIIS-P-IWHIASYLQAAALSAMGMENE 469 (491)
Q Consensus 395 ~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~---A~~~~~~al~l~-p-~~~~a~~~~g~~~~~~~~~~~ 469 (491)
......+.+.|.+++..++. +....++.|.++.+..+... +|..++..++-+ | ..-+..|.+|.+++++|+|++
T Consensus 14 ~~~l~~~~~~y~~e~~~~~~-s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~ 92 (126)
T 1nzn_A 14 VEDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEK 92 (126)
T ss_dssp HHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHhccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHH
Confidence 34456677778888777765 77888888888888777666 888888888877 5 567888999999999999999
Q ss_pred HHHHHHHHHccccccccc
Q 011184 470 AQVALKEGTTLEAKKNST 487 (491)
Q Consensus 470 A~~~~~~al~l~~~~~~~ 487 (491)
|+.+++..|+++|.|..|
T Consensus 93 A~~~~~~lL~~eP~n~QA 110 (126)
T 1nzn_A 93 ALKYVRGLLQTEPQNNQA 110 (126)
T ss_dssp HHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHhCCCCHHH
Confidence 999999999999988654
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.21 E-value=9.3e-06 Score=78.09 Aligned_cols=137 Identities=12% Similarity=0.140 Sum_probs=79.8
Q ss_pred cccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCC--CCcceEEe------EeecCCeeEEEEe
Q 011184 62 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRN--NRLTNLLG------CCCEGDERLLVAE 133 (491)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~~~~------~~~~~~~~~lv~e 133 (491)
+..++.|..+.||+....+| .+++|+... ....+..|+.+++.|.. -.+++++. +....+..++||+
T Consensus 37 ~~~l~gG~~n~~~~v~~~~~-~~vlk~~~~----~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 37 IDVIQGNQMALVWKVHTDSG-AVCLKRIHR----PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EEECC----CEEEEEEETTE-EEEEEEECS----CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeeccccccCcEEEEEeCCC-CEEEEecCC----CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 34456677889999987554 589999864 23455566777776631 23444443 1124567899999
Q ss_pred cCCCCCHH-----------H---Hhccc-CCC--C---------CCHHHH------------------------------
Q 011184 134 YMPNETLA-----------K---HLFHW-ETH--P---------MKWAMR------------------------------ 157 (491)
Q Consensus 134 ~~~~gsL~-----------~---~l~~~-~~~--~---------l~~~~~------------------------------ 157 (491)
|++|.++. . .++.. ... + ..|...
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986532 0 11110 000 0 122111
Q ss_pred -HHHHHHHHHHHHHHHh-------------CCCcccccccccceeeCCCCCeEEccCCCcc
Q 011184 158 -LRVVLHLAQALEYCTS-------------KGRALYHDLNAYRILFDEDGNPRLSTFGLMK 204 (491)
Q Consensus 158 -~~i~~qi~~~L~~LH~-------------~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 204 (491)
..+...+..++.+|+. .+ ++|+|+++.|||++.++.+.|+||+.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPN-LCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCC-EECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCc-eecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111223345556642 34 9999999999999888889999999764
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=98.20 E-value=4.3e-06 Score=91.69 Aligned_cols=62 Identities=15% Similarity=0.116 Sum_probs=36.8
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhC
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS 447 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~ 447 (491)
..+..|++.|.++.+.|+|++|+++|.+| + ++..|.+.+.++.++|+|++|++.+..|++..
T Consensus 1103 n~p~vWsqLAKAql~~G~~kEAIdsYiKA-----d-D~say~eVa~~~~~lGkyEEAIeyL~mArk~~ 1164 (1630)
T 1xi4_A 1103 NEPAVWSQLAKAQLQKGMVKEAIDSYIKA-----D-DPSSYMEVVQAANTSGNWEELVKYLQMARKKA 1164 (1630)
T ss_pred CCHHHHHHHHHHHHhCCCHHHHHHHHHhc-----C-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhc
Confidence 44555666666666666666666666554 2 45555666666666666666666665555444
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.18 E-value=1.2e-05 Score=80.68 Aligned_cols=95 Identities=11% Similarity=-0.080 Sum_probs=72.9
Q ss_pred HHHHHhHHHHHHH-H--HHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcC-----ChHHHHHHHHHHHhhCCCc
Q 011184 379 MQETLNSKKKGDV-A--FRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD-----MPQDALNDAMQAQIISPIW 450 (491)
Q Consensus 379 ~~~~~~~~~~g~~-~--~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~-----~~~~A~~~~~~al~l~p~~ 450 (491)
..++.+++.+|.. + ...+++++|++.|++|++.+ ++.+++++|.+|.. | ++++|+..|++|+ |.+
T Consensus 245 ~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g---~~~A~~~Lg~~y~~-G~g~~~d~~~A~~~~~~Aa---~g~ 317 (452)
T 3e4b_A 245 PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAAD---QPRAELLLGKLYYE-GKWVPADAKAAEAHFEKAV---GRE 317 (452)
T ss_dssp GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHH-CSSSCCCHHHHHHHHHTTT---TTC
T ss_pred CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHc-CCCCCCCHHHHHHHHHHHh---CCC
Confidence 5667777888887 3 46788888888888887654 56777788888874 5 8888888888888 788
Q ss_pred hHHHHHHHHHHHH----CCChHHHHHHHHHHHcc
Q 011184 451 HIASYLQAAALSA----MGMENEAQVALKEGTTL 480 (491)
Q Consensus 451 ~~a~~~~g~~~~~----~~~~~~A~~~~~~al~l 480 (491)
+.+++++|.+|.. ..++++|+.+|++|.+.
T Consensus 318 ~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 351 (452)
T 3e4b_A 318 VAADYYLGQIYRRGYLGKVYPQKALDHLLTAARN 351 (452)
T ss_dssp HHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhh
Confidence 8888888887776 44888888888888764
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.07 E-value=3.5e-05 Score=76.28 Aligned_cols=102 Identities=10% Similarity=-0.002 Sum_probs=77.0
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-----CcHHHHhhHHHHHHhcCChHHHHHHHHHHHhh------CCCchH
Q 011184 384 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTM-----VSPTVYARRSLCYLMSDMPQDALNDAMQAQII------SPIWHI 452 (491)
Q Consensus 384 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-----~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l------~p~~~~ 452 (491)
.....|..+...|++++|++.|++++...+. ....++.++|.+|...|+|++|+..+++++.. .|....
T Consensus 97 ~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~ 176 (434)
T 4b4t_Q 97 LKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVD 176 (434)
T ss_dssp HHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHH
Confidence 3344555555666777777777776643221 13567788999999999999999999998866 345577
Q ss_pred HHHHHHHHHHHCCChHHHHHHHHHHHccccccc
Q 011184 453 ASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 453 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 485 (491)
++...|.+|..+|+|++|...|++|+.+.+...
T Consensus 177 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~ 209 (434)
T 4b4t_Q 177 VHLLESKVYHKLRNLAKSKASLTAARTAANSIY 209 (434)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCC
Confidence 899999999999999999999999998866543
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=98.06 E-value=3.6e-05 Score=71.96 Aligned_cols=63 Identities=11% Similarity=-0.076 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCC--CCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCC
Q 011184 385 SKKKGDVAFRQKDLKDAIECYTQFIDAGT--MVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISP 448 (491)
Q Consensus 385 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p--~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p 448 (491)
++..|.++...|++++|++.+.++|..+| . +..++..++.+++++|+.+.|.+.+++..+.+|
T Consensus 103 ~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~-~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~ 167 (310)
T 3mv2_B 103 LYLLATAQAILGDLDKSLETCVEGIDNDEAEG-TTELLLLAIEVALLNNNVSTASTIFDNYTNAIE 167 (310)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTT-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhccCCCcC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCc
Confidence 34455555555555555555555555554 3 444555555555555555555555555555555
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=98.02 E-value=1.8e-05 Score=74.13 Aligned_cols=75 Identities=21% Similarity=0.239 Sum_probs=57.0
Q ss_pred ccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCC---CCcceEEeEeecCCeeEEEEecCCC
Q 011184 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRN---NRLTNLLGCCCEGDERLLVAEYMPN 137 (491)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H---~niv~~~~~~~~~~~~~lv~e~~~~ 137 (491)
-+..+|.|..+.||+.++.+|+.|++|+...........|..|+..|+.|.. -.+++++++. ..++||||+++
T Consensus 19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~ 94 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred EEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecc
Confidence 3567789999999999999999999998765554445678899999999842 2355666643 23799999987
Q ss_pred CC
Q 011184 138 ET 139 (491)
Q Consensus 138 gs 139 (491)
+.
T Consensus 95 ~~ 96 (288)
T 3f7w_A 95 RP 96 (288)
T ss_dssp CC
T ss_pred cC
Confidence 64
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=98.02 E-value=1.1e-05 Score=78.94 Aligned_cols=104 Identities=9% Similarity=-0.031 Sum_probs=79.7
Q ss_pred hhhhhhhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCch
Q 011184 372 FQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH 451 (491)
Q Consensus 372 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~ 451 (491)
|+........+..|..+|..+++.|+|++|++.|.+| + ++..|...+.++...|+++.|...... |...|++
T Consensus 138 yeeA~~~Y~~a~n~~~LA~~L~~Lg~yq~AVea~~KA-----~-~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad~- 209 (449)
T 1b89_A 138 YDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKA-----N-STRTWKEVCFACVDGKEFRLAQMCGLH-IVVHADE- 209 (449)
T ss_dssp TTTHHHHHHHTTCHHHHHHHHHTTTCHHHHHHHHHHH-----T-CHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHHH-
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHhccHHHHHHHHHHc-----C-CchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHhh-
Confidence 3333344456678899999999999999999999999 3 567777777888888888888776664 4456655
Q ss_pred HHHHHHHHHHHHCCChHHHHHHHHHHHccccccc
Q 011184 452 IASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 452 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 485 (491)
...+...|.+.|++++|+..|++|+.+++...
T Consensus 210 --l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~ 241 (449)
T 1b89_A 210 --LEELINYYQDRGYFEELITMLEAALGLERAHM 241 (449)
T ss_dssp --HHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCH
T ss_pred --HHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHH
Confidence 33577888899999999999999998886653
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=98.00 E-value=5.8e-05 Score=71.26 Aligned_cols=75 Identities=15% Similarity=0.068 Sum_probs=60.1
Q ss_pred cccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccC---CCCcceEEeEeecCCeeEEEEecCCCC
Q 011184 62 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR---NNRLTNLLGCCCEGDERLLVAEYMPNE 138 (491)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~~~~~~~~~~~~~lv~e~~~~g 138 (491)
+..++.|....+|+... ++..+++|+.... ....+..|+..|+.|. ...+++++.++...+..++||||++|.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 45678899999999886 4678889987532 2567889999999984 356889999888888899999999987
Q ss_pred CH
Q 011184 139 TL 140 (491)
Q Consensus 139 sL 140 (491)
++
T Consensus 117 ~~ 118 (312)
T 3jr1_A 117 KN 118 (312)
T ss_dssp CC
T ss_pred CC
Confidence 54
|
| >3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.99 E-value=2.3e-05 Score=65.04 Aligned_cols=97 Identities=7% Similarity=-0.060 Sum_probs=77.5
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC--------cHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCC---
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--------SPTVYARRSLCYLMSDMPQDALNDAMQAQIISP--- 448 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~--------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p--- 448 (491)
....++++....++..|.|+.|+-..+.++.+..++ .+.++...|.+++..++|..|...|++||++.-
T Consensus 18 ~~~~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~ 97 (167)
T 3ffl_A 18 GSHMNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALS 97 (167)
T ss_dssp ---CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-
T ss_pred ccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHh
Confidence 445688888999999999999999999987554321 133677889999999999999999999975531
Q ss_pred ----------------------CchHHHHHHHHHHHHCCChHHHHHHHHH
Q 011184 449 ----------------------IWHIASYLQAAALSAMGMENEAQVALKE 476 (491)
Q Consensus 449 ----------------------~~~~a~~~~g~~~~~~~~~~~A~~~~~~ 476 (491)
...+..|..+.||.++|++++|+..++.
T Consensus 98 k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 98 KTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp -------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred cCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 1136789999999999999999999876
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=97.99 E-value=2.9e-05 Score=85.35 Aligned_cols=63 Identities=16% Similarity=0.111 Sum_probs=59.2
Q ss_pred cHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHccccc
Q 011184 416 SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAK 483 (491)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 483 (491)
.+.+|+++|.++...|++++|+..|.+| +++.+|++.|.++.++|+|++|++.|..|.+.++.
T Consensus 1104 ~p~vWsqLAKAql~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1104 EPAVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHhc-----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 6788999999999999999999999887 88999999999999999999999999999988744
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.93 E-value=9.4e-05 Score=70.35 Aligned_cols=160 Identities=12% Similarity=0.133 Sum_probs=92.6
Q ss_pred ccccCHHHHHHHhcCCccc--cccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCC--cc
Q 011184 41 FREFTLEQLKNATSGFAVE--NIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNR--LT 116 (491)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~--~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv 116 (491)
+..++.+++......|... .-+..++.|....+|+....+| .+++|...... ....+..|+.++..|...+ ++
T Consensus 4 ~~~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP 80 (322)
T 2ppq_A 4 YTDITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCP 80 (322)
T ss_dssp -CCCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCC
T ss_pred cccCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCC
Confidence 4567778888887777642 2345667788889999987655 68899886521 2346777888888884222 34
Q ss_pred eEEeE------eecCCeeEEEEecCCCCCHHH--------------Hhccc--C-CCC----CC---HHHHHH-------
Q 011184 117 NLLGC------CCEGDERLLVAEYMPNETLAK--------------HLFHW--E-THP----MK---WAMRLR------- 159 (491)
Q Consensus 117 ~~~~~------~~~~~~~~lv~e~~~~gsL~~--------------~l~~~--~-~~~----l~---~~~~~~------- 159 (491)
+++.. ....+..+++|+|++|.++.. .++.. . ..+ .. |.....
T Consensus 81 ~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 81 LPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp CBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred cccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence 44421 122356789999999865311 01110 0 001 11 211100
Q ss_pred -----HHHHHHHHHHHHHh-------CCCcccccccccceeeCCCCCeEEccCCCcc
Q 011184 160 -----VVLHLAQALEYCTS-------KGRALYHDLNAYRILFDEDGNPRLSTFGLMK 204 (491)
Q Consensus 160 -----i~~qi~~~L~~LH~-------~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 204 (491)
+...+...+..++. .+ ++|+|+++.|||++.++.+.|+||+.+.
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~-liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAG-VIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEE-EECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcc-cCCCCCCccCEEEeCCceEEEecchhcc
Confidence 00113344555542 23 8999999999999887666899999765
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.91 E-value=3.1e-05 Score=76.69 Aligned_cols=101 Identities=11% Similarity=-0.030 Sum_probs=86.5
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhc------CCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCc----
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDA------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---- 450 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~---- 450 (491)
.+..+.++|..++..|+|++|+..+.+++.. .+. ...++.+.+.+|..+|++++|...+++++.+.+..
T Consensus 134 ~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 212 (434)
T 4b4t_Q 134 KHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPS-LVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPT 212 (434)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCH
T ss_pred HHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchh-HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCch
Confidence 3567889999999999999999999999864 222 56789999999999999999999999999876422
Q ss_pred ---hHHHHHHHHHHHHCCChHHHHHHHHHHHcccc
Q 011184 451 ---HIASYLQAAALSAMGMENEAQVALKEGTTLEA 482 (491)
Q Consensus 451 ---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 482 (491)
...+...|..+...|+|++|..+|.++++..+
T Consensus 213 ~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~ 247 (434)
T 4b4t_Q 213 QTVAELDLMSGILHCEDKDYKTAFSYFFESFESYH 247 (434)
T ss_dssp HHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence 45688889999999999999999999987643
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.90 E-value=8.2e-05 Score=73.72 Aligned_cols=74 Identities=14% Similarity=0.163 Sum_probs=46.3
Q ss_pred ccccCCCCCccEEEEEEECCCCEEEEEEeCCC----CCC---ChhHHHHHHHHHhcc---CCCCcceEEeEeecCCeeEE
Q 011184 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRM----AWP---DPRQFLEEARSVGQL---RNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~----~~~---~~~~~~~E~~~l~~l---~H~niv~~~~~~~~~~~~~l 130 (491)
.+..+|.|..+.||+... +++.++||..... ... .......|.+++..+ ....+++++.+. .+..++
T Consensus 38 ~i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~l 114 (420)
T 2pyw_A 38 VIKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALI 114 (420)
T ss_dssp EEEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEE
T ss_pred EEEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEE
Confidence 456778899999999965 4678999943211 111 112233344444333 234677787765 456799
Q ss_pred EEecC-CC
Q 011184 131 VAEYM-PN 137 (491)
Q Consensus 131 v~e~~-~~ 137 (491)
||||+ +|
T Consensus 115 v~e~l~~g 122 (420)
T 2pyw_A 115 GMRYLEPP 122 (420)
T ss_dssp EECCCCTT
T ss_pred EEeecCCc
Confidence 99999 76
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.86 E-value=0.00032 Score=66.83 Aligned_cols=97 Identities=19% Similarity=0.160 Sum_probs=63.5
Q ss_pred ccccCHHHHHHHhcCCccc--cccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCC--Ccc
Q 011184 41 FREFTLEQLKNATSGFAVE--NIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNN--RLT 116 (491)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~--~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~--niv 116 (491)
+..++.+++......|... .-+..++ |....||+....+|+.+++|...... .....+..|..++..+... .++
T Consensus 8 ~~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp 85 (328)
T 1zyl_A 8 FQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVA 85 (328)
T ss_dssp CCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBC
T ss_pred CCCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeec
Confidence 5567777777776555432 1233455 77789998877677789999986432 2456778899998888422 244
Q ss_pred eEEeE-----eecCCeeEEEEecCCCCC
Q 011184 117 NLLGC-----CCEGDERLLVAEYMPNET 139 (491)
Q Consensus 117 ~~~~~-----~~~~~~~~lv~e~~~~gs 139 (491)
+++.. ...++..++||++++|.+
T Consensus 86 ~~~~~~g~~~~~~~g~~~~l~~~i~G~~ 113 (328)
T 1zyl_A 86 APVAFNGQTLLNHQGFYFAVFPSVGGRQ 113 (328)
T ss_dssp CCCCBTTBSCEEETTEEEEEEECCCCEE
T ss_pred ceeecCCcEEEEECCEEEEEEEecCCCC
Confidence 44443 122455688999998754
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=97.84 E-value=6.5e-05 Score=70.26 Aligned_cols=99 Identities=11% Similarity=-0.018 Sum_probs=79.8
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCC-----CCcHHHHhhHHHHHHhcC--ChHHHHHHHHHHHhhCCCc--
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGT-----MVSPTVYARRSLCYLMSD--MPQDALNDAMQAQIISPIW-- 450 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p-----~~~~~~~~~~~~~~~~~~--~~~~A~~~~~~al~l~p~~-- 450 (491)
.+.+.+...+..+.+.|+.+.|.+.+++..+.+| ++....+..-|.+.+..| ++++|...|+++.+..|++
T Consensus 134 ~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~ 213 (310)
T 3mv2_B 134 GTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWKT 213 (310)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHH
T ss_pred CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCccc
Confidence 5777888899999999999999999999999999 313333322243455556 8999999999999999983
Q ss_pred hHHHHHHHHHHHHCCChHHHHHHHHHHHccc
Q 011184 451 HIASYLQAAALSAMGMENEAQVALKEGTTLE 481 (491)
Q Consensus 451 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 481 (491)
...+++ +++.+|++++|.+.++..+++.
T Consensus 214 ~~lLln---~~~~~g~~~eAe~~L~~l~~~~ 241 (310)
T 3mv2_B 214 QLGLLN---LHLQQRNIAEAQGIVELLLSDY 241 (310)
T ss_dssp HHHHHH---HHHHHTCHHHHHHHHHHHHSHH
T ss_pred HHHHHH---HHHHcCCHHHHHHHHHHHHHhc
Confidence 445555 8999999999999999888884
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00018 Score=65.83 Aligned_cols=105 Identities=10% Similarity=-0.048 Sum_probs=74.9
Q ss_pred HHHHHhHHHHHHHHHHh------cCHHHHHHH-----HHHHH-hcCCCCcHHHHhhHHHHHHh---c--CC------hHH
Q 011184 379 MQETLNSKKKGDVAFRQ------KDLKDAIEC-----YTQFI-DAGTMVSPTVYARRSLCYLM---S--DM------PQD 435 (491)
Q Consensus 379 ~~~~~~~~~~g~~~~~~------~~~~~A~~~-----~~~al-~~~p~~~~~~~~~~~~~~~~---~--~~------~~~ 435 (491)
...+..++.+|..|-.. ..|.++++. +.+++ +.+|+ ++..++..|.+... . |. ...
T Consensus 103 ~~RA~~Ly~ra~~y~~raL~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~ 181 (301)
T 3u64_A 103 YSRARKLYLRGARYALSSLETAYPGFTREVFSGDEQRLHKVLSRCTRV-DVGTLYWVGTGYVAAFALTPLGSALPDTVHA 181 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTTHHHHHTSSCHHHHHHHHTTCCGG-GHHHHHHHHHHHHHHHTTSCTTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCccHHHHHHhcchhhHHHHHHHcCcc-ccHHHHHHHHHHHHHHhcCCCChHHHHhHHH
Confidence 34555666666555321 334444432 34555 45666 77776666665533 1 22 467
Q ss_pred HHHHHHHHHhhCCC--chHHHHHHHHHHHHC-----CChHHHHHHHHHHHcccccc
Q 011184 436 ALNDAMQAQIISPI--WHIASYLQAAALSAM-----GMENEAQVALKEGTTLEAKK 484 (491)
Q Consensus 436 A~~~~~~al~l~p~--~~~a~~~~g~~~~~~-----~~~~~A~~~~~~al~l~~~~ 484 (491)
|...+++|++++|+ +..+|..+|..|... |+.++|.+.|++||+|+|+.
T Consensus 182 A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~ 237 (301)
T 3u64_A 182 AVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAH 237 (301)
T ss_dssp HHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999 567999999999996 99999999999999999965
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=7e-05 Score=74.18 Aligned_cols=88 Identities=13% Similarity=-0.053 Sum_probs=71.1
Q ss_pred hhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCC--CcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhC--
Q 011184 377 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA-----GTM--VSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS-- 447 (491)
Q Consensus 377 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~p~--~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~-- 447 (491)
+.+..+..+.++|.++...|+|++|+..|.++|++ .|+ +....++|+|.+|..+|++++|+..|++|+++.
T Consensus 324 ~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~ 403 (429)
T 3qwp_A 324 INIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRV 403 (429)
T ss_dssp TSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 34567889999999999999999999999999843 233 145679999999999999999999999998764
Q ss_pred ---CCc---hHHHHHHHHHHHHC
Q 011184 448 ---PIW---HIASYLQAAALSAM 464 (491)
Q Consensus 448 ---p~~---~~a~~~~g~~~~~~ 464 (491)
|++ ..++.+++.++..+
T Consensus 404 ~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 404 THGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HTCTTSHHHHHHHHHHHHHHHHH
T ss_pred hcCCCChHHHHHHHHHHHHHHHH
Confidence 555 45667777776554
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00035 Score=60.99 Aligned_cols=142 Identities=12% Similarity=0.029 Sum_probs=94.0
Q ss_pred CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccccceeeCCCCCeEEccCCCcccCCCCCccccCC
Q 011184 138 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL 216 (491)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~t~ 216 (491)
-||.+.|.. .+.+++++++|.++.|.+.+|.-+-. +. -..+=+.|..|++..+|.|...+ +.+. ....
T Consensus 33 vSL~eIL~~-~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~~~~i~~~~~i~l~~dG~V~f~~-~~s~--------~~~~ 101 (229)
T 2yle_A 33 LSLEEILRL-YNQPINEEQAWAVCYQCCGSLRAAARRRQ-PRHRVRSAAQIRVWRDGAVTLAP-AADD--------AGEP 101 (229)
T ss_dssp EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred ccHHHHHHH-cCCCcCHHHHHHHHHHHHHHHHhhhhccc-CCceecCCcceEEecCCceeccc-cccc--------cccc
Confidence 479998875 35799999999999999999887622 22 12333457899999999987763 1110 1223
Q ss_pred CCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHhccC-
Q 011184 217 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY- 295 (491)
Q Consensus 217 ~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~- 295 (491)
.+.+||... ...+.+.=|||||+++|.-+.-..|.. -...+++.+.+||..|...
T Consensus 102 ~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~-----------------------eE~eLS~~LE~LL~~Mt~~~ 157 (229)
T 2yle_A 102 PPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKEN-----------------------EERELSPPLEQLIDHMANTV 157 (229)
T ss_dssp -----CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTT-----------------------EEECCCHHHHHHHHHHTTCC
T ss_pred CCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcc-----------------------cchhhCHHHHHHHHHHHhcc
Confidence 467888764 345678889999999999987553321 1224457888899888765
Q ss_pred ------------------------CCCCCCChhHHHHHhcccc
Q 011184 296 ------------------------EPRERPNPKSLVTALSPLQ 314 (491)
Q Consensus 296 ------------------------dp~~Rps~~~il~~L~~~~ 314 (491)
.+..|+++++|++.-....
T Consensus 158 ~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~C~~hl 200 (229)
T 2yle_A 158 EADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKLCAAHL 200 (229)
T ss_dssp C--------------------CCSCCCCCCSHHHHHHHHHTTS
T ss_pred cccccccccccccccccccccccccccCcCCHHHHHHHHHhhc
Confidence 2467889999988665443
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=97.65 E-value=4.5e-05 Score=74.70 Aligned_cols=88 Identities=16% Similarity=0.034 Sum_probs=64.0
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHH
Q 011184 382 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 461 (491)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (491)
..++...|..++..|.|++|..+|.++ + .|.++|.|+.++|+|++|++.|.+| .++.+|...+.++
T Consensus 122 ~~a~~~IGd~~~~~g~yeeA~~~Y~~a----~-----n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aC 187 (449)
T 1b89_A 122 NAHIQQVGDRCYDEKMYDAAKLLYNNV----S-----NFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFAC 187 (449)
T ss_dssp ---------------CTTTHHHHHHHT----T-----CHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHh----h-----hHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHH
Confidence 349999999999999999999999988 2 3889999999999999999999999 4789999999999
Q ss_pred HHCCChHHHHHHHHHHHcccccc
Q 011184 462 SAMGMENEAQVALKEGTTLEAKK 484 (491)
Q Consensus 462 ~~~~~~~~A~~~~~~al~l~~~~ 484 (491)
...|+++.|..+... +.++|+.
T Consensus 188 v~~~ef~lA~~~~l~-L~~~ad~ 209 (449)
T 1b89_A 188 VDGKEFRLAQMCGLH-IVVHADE 209 (449)
T ss_dssp HHTTCHHHHHHTTTT-TTTCHHH
T ss_pred HHcCcHHHHHHHHHH-HHhCHhh
Confidence 999999999877664 4455554
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00041 Score=66.24 Aligned_cols=138 Identities=9% Similarity=-0.013 Sum_probs=74.2
Q ss_pred ccCCCCCccE-EEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccC-C-CCcceEEeEeecCCeeEEEEecCCCCC
Q 011184 63 SEHGEKAPNV-VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-N-NRLTNLLGCCCEGDERLLVAEYMPNET 139 (491)
Q Consensus 63 ~~lG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H-~niv~~~~~~~~~~~~~lv~e~~~~gs 139 (491)
..++.|.... +|+....+|..+++|...... ...+..|+.++..+. + -.+++++.+....+ +++||++.+.+
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 3444454443 667665446778887654322 134556788888774 2 23567777654433 78999998777
Q ss_pred HHHHhccc---------------------CC---CCCCHHHHH-------HH-------------HHHHHHHHHHH----
Q 011184 140 LAKHLFHW---------------------ET---HPMKWAMRL-------RV-------------VLHLAQALEYC---- 171 (491)
Q Consensus 140 L~~~l~~~---------------------~~---~~l~~~~~~-------~i-------------~~qi~~~L~~L---- 171 (491)
+.+.+... .. ..+...... .+ ...+...+..+
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 75443210 00 011111100 00 00111122222
Q ss_pred --HhCCCcccccccccceeeCCC----CCeEEccCCCcccC
Q 011184 172 --TSKGRALYHDLNAYRILFDED----GNPRLSTFGLMKNS 206 (491)
Q Consensus 172 --H~~~~iiH~Dlkp~Nill~~~----~~~kl~Dfgla~~~ 206 (491)
+... ++|+|+.+.|||++.+ +.+.|+||+.+...
T Consensus 179 ~~~~~~-lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 179 LEGDMV-FVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCSCCE-EECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred ccCCCe-eEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 1233 8999999999999874 67899999987653
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00011 Score=72.77 Aligned_cols=74 Identities=9% Similarity=0.015 Sum_probs=63.6
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhC--
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA--------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS-- 447 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~-- 447 (491)
.+..+..+.++|.+|..+|+|++|+..|+++|++ .|+ ....++|+|.+|..+|++++|+..|++|+++.
T Consensus 336 Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~-~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~ 414 (433)
T 3qww_A 336 NVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLN-VASMWLKLGRLYMGLENKAAGEKALKKAIAIMEV 414 (433)
T ss_dssp SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 4567889999999999999999999999999853 334 56679999999999999999999999999764
Q ss_pred ---CCchH
Q 011184 448 ---PIWHI 452 (491)
Q Consensus 448 ---p~~~~ 452 (491)
|+++.
T Consensus 415 ~lG~~Hp~ 422 (433)
T 3qww_A 415 AHGKDHPY 422 (433)
T ss_dssp HTCTTCHH
T ss_pred HcCCCChH
Confidence 66544
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00022 Score=67.12 Aligned_cols=71 Identities=13% Similarity=0.135 Sum_probs=45.6
Q ss_pred cccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCc-ceEEeEeecCCeeEEEEecC-CCCC
Q 011184 62 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRL-TNLLGCCCEGDERLLVAEYM-PNET 139 (491)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~~~~~~~~~~~~~lv~e~~-~~gs 139 (491)
+..++.|....+|+. ..+++|+...... ..-...+|+.+++.+...++ .++++++. +.-++|+||+ +|.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~-~~~~r~~E~~~l~~l~~~g~~P~~~~~~~--~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTE-EYINRANEAVAAREAAKAGVSPEVLHVDP--ATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECT--TTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCcc-ceeCHHHHHHHHHHHHHcCCCCceEEEEC--CCCEEEEeecCCCcc
Confidence 456677888999998 4588898765321 12234578888888843233 56766543 3347899999 6654
Q ss_pred H
Q 011184 140 L 140 (491)
Q Consensus 140 L 140 (491)
|
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00018 Score=68.55 Aligned_cols=75 Identities=15% Similarity=0.075 Sum_probs=65.4
Q ss_pred HHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHH
Q 011184 379 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 455 (491)
Q Consensus 379 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 455 (491)
..++..+...|..+.-.|++++|+..+++|+.++|+ ..+|..+|.++...|++++|++.|++|+.++|.....++
T Consensus 274 ~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s--~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t~~~ 348 (372)
T 3ly7_A 274 NNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS--WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLYW 348 (372)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHHHHH
T ss_pred CcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC--HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcChHHH
Confidence 455667777888888889999999999999999976 577888999999999999999999999999998864333
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00026 Score=68.71 Aligned_cols=138 Identities=15% Similarity=0.200 Sum_probs=83.3
Q ss_pred cccCCCCCccEEEEEEEC--------CCCEEEEEEeCCCCCCChhHHHHHHHHHhccC-CCCcceEEeEeecCCeeEEEE
Q 011184 62 VSEHGEKAPNVVYKGKLE--------NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~~lv~ 132 (491)
+..+..|-...+|+.... +++.+++|+.... ........+|..+++.|. +.-.+++++++.. .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 345566778899998864 2478999986332 234556779999999884 4334677777654 3999
Q ss_pred ecCCCCCHHHH--------------h---cccC---CCCCC--HHHHHHHHHHHHH-------------------HHHHH
Q 011184 133 EYMPNETLAKH--------------L---FHWE---THPMK--WAMRLRVVLHLAQ-------------------ALEYC 171 (491)
Q Consensus 133 e~~~~gsL~~~--------------l---~~~~---~~~l~--~~~~~~i~~qi~~-------------------~L~~L 171 (491)
||++|.+|..- | +... .++.. +.++.++..++.. .+..|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99998655311 0 1100 11122 3455555544422 23333
Q ss_pred H----hCC---CcccccccccceeeCCC----CCeEEccCCCcc
Q 011184 172 T----SKG---RALYHDLNAYRILFDED----GNPRLSTFGLMK 204 (491)
Q Consensus 172 H----~~~---~iiH~Dlkp~Nill~~~----~~~kl~Dfgla~ 204 (491)
. ..+ .++|+|+.+.|||++.+ +.+.|+||..+.
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 2 211 28999999999999876 789999998764
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=97.56 E-value=0.0003 Score=55.83 Aligned_cols=82 Identities=11% Similarity=-0.060 Sum_probs=70.6
Q ss_pred HHHHhHHHHHHHHHHhcCHHH---HHHHHHHHHhcC-CCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHH
Q 011184 380 QETLNSKKKGDVAFRQKDLKD---AIECYTQFIDAG-TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 455 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~---A~~~~~~al~~~-p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 455 (491)
....+.++.|+.+.+..+-.. +|..++..++.+ |...-.+.+.+|..+.++|+|++|...++..|++.|+|.+|.-
T Consensus 33 ~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~ 112 (126)
T 1nzn_A 33 VSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKE 112 (126)
T ss_dssp CCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHH
Confidence 456788999999988877666 999999999987 6337788999999999999999999999999999999999877
Q ss_pred HHHHHH
Q 011184 456 LQAAAL 461 (491)
Q Consensus 456 ~~g~~~ 461 (491)
-+..+-
T Consensus 113 Lk~~i~ 118 (126)
T 1nzn_A 113 LERLID 118 (126)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665543
|
| >3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00036 Score=55.54 Aligned_cols=82 Identities=5% Similarity=-0.174 Sum_probs=56.7
Q ss_pred HHHHhHHHHHHHHHHhcC---HHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHH
Q 011184 380 QETLNSKKKGDVAFRQKD---LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 456 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~---~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 456 (491)
..+.+.++.|+.+.+..+ ..++|..++..++.+|...-..++.+|..+.++|+|++|..+++..|++.|+|.+|.--
T Consensus 38 vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~L 117 (134)
T 3o48_A 38 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGAL 117 (134)
T ss_dssp SCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHH
T ss_pred CChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHH
Confidence 345677777777765544 34677777777777775456677777777777777777777777777777777776655
Q ss_pred HHHHH
Q 011184 457 QAAAL 461 (491)
Q Consensus 457 ~g~~~ 461 (491)
+..+-
T Consensus 118 k~~Ie 122 (134)
T 3o48_A 118 KSMVE 122 (134)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54443
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0012 Score=65.70 Aligned_cols=74 Identities=14% Similarity=0.082 Sum_probs=48.8
Q ss_pred cccCCCCCccEEEEEEECC-CCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCc-ceEEeEeecCCeeEEEEecCCCCC
Q 011184 62 VSEHGEKAPNVVYKGKLEN-QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRL-TNLLGCCCEGDERLLVAEYMPNET 139 (491)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~~~~~~~~~~~~~lv~e~~~~gs 139 (491)
+..++.|-...+|+....+ +..+++|+...... ..-...+|..++..|...++ +++++.+. + .+||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~-~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTD-EIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CC-SCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChh-hhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 3456778889999998755 47888998754321 11123689999999965444 57887773 2 36999999754
Q ss_pred H
Q 011184 140 L 140 (491)
Q Consensus 140 L 140 (491)
|
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0012 Score=53.29 Aligned_cols=80 Identities=5% Similarity=-0.168 Sum_probs=51.7
Q ss_pred HHHHhHHHHHHHHHHhcC---HHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHH
Q 011184 380 QETLNSKKKGDVAFRQKD---LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 456 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~---~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~ 456 (491)
....+.++.|+.+.+..+ -.+++..++..++.+|...-.+.+.+|..+.++|+|++|..+++..|++.|+|.+|.--
T Consensus 37 vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~L 116 (144)
T 1y8m_A 37 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGAL 116 (144)
T ss_dssp SCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 455666666766665544 34566677777766665455666667777777777777777777777777777666544
Q ss_pred HHH
Q 011184 457 QAA 459 (491)
Q Consensus 457 ~g~ 459 (491)
+..
T Consensus 117 k~~ 119 (144)
T 1y8m_A 117 KSM 119 (144)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0018 Score=62.00 Aligned_cols=68 Identities=7% Similarity=0.020 Sum_probs=45.0
Q ss_pred CCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCC---CCcceEEeE------eecCCeeEEEEecCC
Q 011184 66 GEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRN---NRLTNLLGC------CCEGDERLLVAEYMP 136 (491)
Q Consensus 66 G~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H---~niv~~~~~------~~~~~~~~lv~e~~~ 136 (491)
|.|....||+....+| .+++|+...... ..|+..+..|.. |++++.+.. ....+..++||+|++
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~ 104 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH 104 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence 4455689999987666 899998765431 356677766631 224555432 233467899999999
Q ss_pred CCCH
Q 011184 137 NETL 140 (491)
Q Consensus 137 ~gsL 140 (491)
|..+
T Consensus 105 G~~~ 108 (339)
T 3i1a_A 105 APNG 108 (339)
T ss_dssp CCBT
T ss_pred CCcC
Confidence 8765
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00093 Score=66.16 Aligned_cols=73 Identities=15% Similarity=0.265 Sum_probs=51.2
Q ss_pred cccCCCCCccEEEEEEECC--------CCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCC-cceEEeEeecCCeeEEEE
Q 011184 62 VSEHGEKAPNVVYKGKLEN--------QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNR-LTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n-iv~~~~~~~~~~~~~lv~ 132 (491)
+..++.|....||+....+ +..+++|+.... .....+.+|..+++.|...+ .+++++.+.+ .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 4566778889999998653 478999988432 12256778999999985333 4677776643 3899
Q ss_pred ecCCCCCH
Q 011184 133 EYMPNETL 140 (491)
Q Consensus 133 e~~~~gsL 140 (491)
||++|.+|
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99987443
|
| >1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0027 Score=51.15 Aligned_cols=72 Identities=7% Similarity=-0.107 Sum_probs=63.6
Q ss_pred cHHHHhhHHHHHHhcCCh---HHHHHHHHHHHhhCC-CchHHHHHHHHHHHHCCChHHHHHHHHHHHccccccccc
Q 011184 416 SPTVYARRSLCYLMSDMP---QDALNDAMQAQIISP-IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~---~~A~~~~~~al~l~p-~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
.....++.|.++.+..+. .++|..++..++-.| ..-+..|.+|.+++++|+|++|..+.+..|+++|.|..|
T Consensus 38 s~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA 113 (144)
T 1y8m_A 38 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQV 113 (144)
T ss_dssp CHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHH
Confidence 577788888999887664 479999999999998 467899999999999999999999999999999998754
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 491 | ||||
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 1e-41 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 2e-41 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 1e-40 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 5e-40 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 1e-39 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 4e-39 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 1e-38 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 4e-38 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 3e-37 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 1e-35 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 3e-35 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 4e-35 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 5e-35 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 7e-35 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 1e-34 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 1e-34 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 2e-34 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 6e-34 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 1e-33 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 3e-33 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 1e-32 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 1e-32 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 3e-32 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 4e-32 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 6e-32 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 8e-32 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 8e-31 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 9e-31 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 1e-30 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 2e-30 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 7e-30 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 6e-29 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 6e-29 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 1e-28 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 1e-28 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 6e-28 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 2e-27 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 5e-27 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 1e-26 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 1e-26 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 9e-26 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 1e-25 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 3e-25 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 2e-24 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 4e-24 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 7e-24 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 1e-23 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 2e-23 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 2e-22 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 3e-22 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 4e-22 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 5e-22 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 1e-21 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 2e-21 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 5e-20 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 1e-19 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 1e-19 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 3e-17 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 3e-16 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 2e-15 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 3e-14 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 3e-13 | |
| d2c2la1 | 201 | a.118.8.1 (A:24-224) STIP1 homology and U box-cont | 7e-07 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 9e-07 | |
| d1p5qa1 | 170 | a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal d | 3e-04 | |
| d2fbna1 | 153 | a.118.8.1 (A:22-174) Putative 70 kda peptidylproly | 3e-04 | |
| d1hh8a_ | 192 | a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF- | 7e-04 | |
| d1w3ba_ | 388 | a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, | 8e-04 | |
| d1elra_ | 128 | a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9 | 8e-04 | |
| d1kt1a1 | 168 | a.118.8.1 (A:254-421) FKBP51, C-terminal domain {M | 0.001 | |
| d1elwa_ | 117 | a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9 | 0.003 |
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 147 bits (372), Expect = 1e-41
Identities = 52/249 (20%), Positives = 105/249 (42%), Gaps = 12/249 (4%)
Query: 72 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131
+V+ G N+ ++A+K A + F+EEA + +L + +L L G C E LV
Sbjct: 20 LVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 78
Query: 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 191
E+M + L+ + + L + L + + + Y ++ DL A L E
Sbjct: 79 FEFMEHGCLSDY-LRTQRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGE 136
Query: 192 DGNPRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 246
+ ++S FG+ + D + S+ + + PE R + +S ++SFG L+ ++
Sbjct: 137 NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 196
Query: 247 SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 306
S IP + + + + T + ++ + C + P +RP L
Sbjct: 197 SEGKIPYEN----RSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRL 252
Query: 307 VTALSPLQK 315
+ L+ + +
Sbjct: 253 LRQLAEIAE 261
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 146 bits (370), Expect = 2e-41
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 12/244 (4%)
Query: 72 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131
VV GK Q +A+K + + +F+EEA+ + L + +L L G C + ++
Sbjct: 19 VVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 77
Query: 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 191
EYM N L +L H + L + + +A+EY SK L+ DL A L ++
Sbjct: 78 TEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQF-LHRDLAARNCLVND 135
Query: 192 DGNPRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 246
G ++S FGL + D + S+ + ++PPE L + + +S I++FG L+ ++
Sbjct: 136 QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 195
Query: 247 SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 306
S +P + L ++ + C + ERP K L
Sbjct: 196 SLGKMPYER----FTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKIL 251
Query: 307 VTAL 310
++ +
Sbjct: 252 LSNI 255
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 145 bits (366), Expect = 1e-40
Identities = 59/257 (22%), Positives = 107/257 (41%), Gaps = 22/257 (8%)
Query: 72 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131
V+ G ++AVK + + P FL EA + QL++ RL L + + ++
Sbjct: 28 EVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 85
Query: 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 191
EYM N +L L + L + +A+ + + + ++ DL A IL +
Sbjct: 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY-IHRDLRAANILVSD 144
Query: 192 DGNPRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 246
+ +++ FGL + D + + + +T PE + G T +S ++SFG LL +++
Sbjct: 145 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
Query: 247 SGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 301
+ IP + + + D+C E EL +L C + P +RP
Sbjct: 205 THGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE---------ELYQLMRLCWKERPEDRP 255
Query: 302 NPKSLVTALSPLQKETE 318
L + L TE
Sbjct: 256 TFDYLRSVLEDFFTATE 272
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 143 bits (362), Expect = 5e-40
Identities = 60/256 (23%), Positives = 103/256 (40%), Gaps = 12/256 (4%)
Query: 72 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131
V+ G R+A+K P FL+EA+ + +LR+ +L L E + +V
Sbjct: 32 EVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 89
Query: 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 191
EYM +L L ++ + + +A + Y ++ DL A IL E
Sbjct: 90 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGE 148
Query: 192 DGNPRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 246
+ +++ FGL + D + + + +T PE GR T +S ++SFG LL +L
Sbjct: 149 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 208
Query: 247 SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 306
+ +P + +R + + + L L +C + EP ERP + L
Sbjct: 209 TKGRVPYPG----MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYL 264
Query: 307 VTALSPLQKETEVPSH 322
L TE
Sbjct: 265 QAFLEDYFTSTEPQYQ 280
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 142 bits (358), Expect = 1e-39
Identities = 62/251 (24%), Positives = 100/251 (39%), Gaps = 20/251 (7%)
Query: 72 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL-L 130
V G ++AVK A + FL EA + QLR++ L LLG E L +
Sbjct: 22 DVMLGDYRG-NKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 78
Query: 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 190
V EYM +L +L + L+ L + +A+EY ++ DL A +L
Sbjct: 79 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF-VHRDLAARNVLVS 137
Query: 191 EDGNPRLSTFGLMKN-SRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 249
ED ++S FGL K S + + +T PE LR + + +S ++SFG LL ++ S
Sbjct: 138 EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 197
Query: 250 HIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 304
+P + + D C + + C + RP+
Sbjct: 198 RVPYPRIPLKDVVPRVEKGYKMDAPDGCPP---------AVYEVMKNCWHLDAAMRPSFL 248
Query: 305 SLVTALSPLQK 315
L L ++
Sbjct: 249 QLREQLEHIKT 259
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 141 bits (356), Expect = 4e-39
Identities = 54/258 (20%), Positives = 109/258 (42%), Gaps = 12/258 (4%)
Query: 72 VVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130
VY+G + +AVK + +FL+EA + ++++ L LLG C +
Sbjct: 32 EVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 90
Query: 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 190
+ E+M L +L + + L + ++ A+EY K ++ DL A L
Sbjct: 91 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVG 149
Query: 191 EDGNPRLSTFGLMKNSRDGKSYST-----NLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 245
E+ +++ FGL + + + +T PE L + + +S +++FG LL ++
Sbjct: 150 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 209
Query: 246 LSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 305
+ P +DL + L + + + ++ L C Q+ P +RP+
Sbjct: 210 ATYGM-SPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAE 265
Query: 306 LVTALSPLQKETEVPSHV 323
+ A + +E+ + V
Sbjct: 266 IHQAFETMFQESSISDEV 283
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 140 bits (354), Expect = 1e-38
Identities = 59/292 (20%), Positives = 112/292 (38%), Gaps = 26/292 (8%)
Query: 44 FTLEQLKNATSGFAVENIVSEH------GEKAPNVVYKGKL----ENQRRIAVKRFNRMA 93
FT E A FA E +S G V G L + + +A+K
Sbjct: 7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66
Query: 94 WPDP-RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPM 152
R FL EA +GQ + + +L G + +++ E+M N +L
Sbjct: 67 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQF 125
Query: 153 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY 212
+ ++ +A ++Y ++ DL A IL + + ++S FGL + D S
Sbjct: 126 TVIQLVGMLRGIAAGMKYLADMNY-VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 184
Query: 213 STN---------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR 263
T + +T PE ++ + T S ++S+G ++ +++S P + ++
Sbjct: 185 PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD----MTNQ 240
Query: 264 NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315
++ + D + L +L C Q + RP +V L + +
Sbjct: 241 DVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 292
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 138 bits (348), Expect = 4e-38
Identities = 51/258 (19%), Positives = 102/258 (39%), Gaps = 20/258 (7%)
Query: 72 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131
VYKGK + + + F E + + R+ + +G + +V
Sbjct: 23 TVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIV 81
Query: 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 191
++ +L HL ET + + + AQ ++Y +K ++ DL + I E
Sbjct: 82 TQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKSI-IHRDLKSNNIFLHE 139
Query: 192 DGNPRLSTFGL--MKNSRDGKSYSTNLAFTP----PEYLRT---GRVTPESVIYSFGTLL 242
D ++ FGL +K+ G L+ + PE +R + +S +Y+FG +L
Sbjct: 140 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 199
Query: 243 LDLLSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 298
+L++G+ +I + + R S + + RL + CL+ +
Sbjct: 200 YELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK----AMKRLMAECLKKKRD 255
Query: 299 ERPNPKSLVTALSPLQKE 316
ERP ++ ++ L +
Sbjct: 256 ERPLFPQILASIELLARS 273
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 135 bits (341), Expect = 3e-37
Identities = 55/272 (20%), Positives = 100/272 (36%), Gaps = 25/272 (9%)
Query: 42 REFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDP--- 97
R++ LE + I G+ VY + +++ +A+K +
Sbjct: 1 RQWALEDFE----------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE 50
Query: 98 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 157
Q E LR+ + L G + L+ EY P T+ + L
Sbjct: 51 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRT 108
Query: 158 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 215
+ LA AL YC SK ++ D+ +L G +++ FG ++ + +
Sbjct: 109 ATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 167
Query: 216 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 275
L + PPE + + ++S G L + L GK ++ R + +E
Sbjct: 168 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------VEF 221
Query: 276 QFTDDDGTELVRLASRCLQYEPRERPNPKSLV 307
F D L SR L++ P +RP + ++
Sbjct: 222 TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 253
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 131 bits (331), Expect = 1e-35
Identities = 55/268 (20%), Positives = 100/268 (37%), Gaps = 30/268 (11%)
Query: 72 VVYKGKLENQ---RRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGD 126
V KG + + + +AVK A + L EA + QL N + ++G C E +
Sbjct: 22 TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAE 80
Query: 127 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 186
+LV E L K+L + +K + +V ++ ++Y ++ DL A
Sbjct: 81 SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESNF-VHRDLAARN 137
Query: 187 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVTPESVIYSFG 239
+L ++S FGL K R ++Y + + PE + + + +S ++SFG
Sbjct: 138 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG 197
Query: 240 TLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 294
L+ + S P S ++ C E+ L + C
Sbjct: 198 VLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR---------EMYDLMNLCWT 248
Query: 295 YEPRERPNPKSLVTALSPLQKETEVPSH 322
Y+ RP ++ L + H
Sbjct: 249 YDVENRPGFAAVELRLRNYYYDVVNEGH 276
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 131 bits (329), Expect = 3e-35
Identities = 56/265 (21%), Positives = 107/265 (40%), Gaps = 36/265 (13%)
Query: 72 VVYKGKL------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCE 124
+VY+G E + R+A+K N A + +FL EA + + + + LLG +
Sbjct: 35 MVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 94
Query: 125 GDERLLVAEYMPNETLAKHLFHW--------ETHPMKWAMRLRVVLHLAQALEYCTSKGR 176
G L++ E M L +L P + +++ +A + Y +
Sbjct: 95 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKF 154
Query: 177 ALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVT 230
++ DL A + ED ++ FG+ ++ + Y + + PE L+ G T
Sbjct: 155 -VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 213
Query: 231 PESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 285
S ++SFG +L ++ + P L + + L D+C + L
Sbjct: 214 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPD---------ML 264
Query: 286 VRLASRCLQYEPRERPNPKSLVTAL 310
L C QY P+ RP+ +++++
Sbjct: 265 FELMRMCWQYNPKMRPSFLEIISSI 289
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 131 bits (330), Expect = 4e-35
Identities = 52/277 (18%), Positives = 98/277 (35%), Gaps = 44/277 (15%)
Query: 72 VVYKGK-LENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 129
VV+K + +A K + P Q + E + + + + + G E
Sbjct: 21 VVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 80
Query: 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 189
+ E+M +L + L + + + +V + + + L Y K + ++ D+ IL
Sbjct: 81 ICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 138
Query: 190 DEDGNPRLSTFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 247
+ G +L FG+ D + S ++ PE L+ + +S I+S G L+++
Sbjct: 139 NSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
Query: 248 GKH-IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT----------------------- 283
G++ IPP A +L Q+ D+ G
Sbjct: 199 GRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIV 258
Query: 284 --------------ELVRLASRCLQYEPRERPNPKSL 306
E ++CL P ER + K L
Sbjct: 259 NEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 130 bits (329), Expect = 5e-35
Identities = 48/243 (19%), Positives = 85/243 (34%), Gaps = 14/243 (5%)
Query: 72 VVYKGK-LENQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLRNNRLTNLLGCCCEGDE 127
VY + + N +A+K+ + + ++E R + +LR+ GC
Sbjct: 30 AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT 89
Query: 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 187
LV EY H P++ V Q L Y S ++ D+ A I
Sbjct: 90 AWLVMEYCLGSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSHNM-IHRDVKAGNI 146
Query: 188 LFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLD 244
L E G +L FG S+ + PE + G+ + ++S G ++
Sbjct: 147 LLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 206
Query: 245 LLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 304
L K + Q + + G +++ CLQ P++RP +
Sbjct: 207 LAERKPPLFNMNAMSALYHIAQNESPALQSGHWSE----YFRNFVDSCLQKIPQDRPTSE 262
Query: 305 SLV 307
L+
Sbjct: 263 VLL 265
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 129 bits (325), Expect = 7e-35
Identities = 47/255 (18%), Positives = 88/255 (34%), Gaps = 28/255 (10%)
Query: 72 VVYKGK-LENQRRIAVKRFNR--MAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 128
K + + + + K + M + + + E + +L++ + +
Sbjct: 19 RCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNT 78
Query: 129 LL--VAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH---- 180
L V EY LA + E + LRV+ L AL+ C + +
Sbjct: 79 TLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHR 138
Query: 181 DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIY 236
DL + D N +L FGL + S++ TP PE + +S I+
Sbjct: 139 DLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIW 198
Query: 237 SFGTLLLDLLSGKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 292
S G LL +L + IR+ + + + EL + +R
Sbjct: 199 SLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSD---------ELNEIITRM 249
Query: 293 LQYEPRERPNPKSLV 307
L + RP+ + ++
Sbjct: 250 LNLKDYHRPSVEEIL 264
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 129 bits (325), Expect = 1e-34
Identities = 61/284 (21%), Positives = 105/284 (36%), Gaps = 50/284 (17%)
Query: 72 VVYKGKL------ENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCE 124
V++ + E +AVK A D F EA + + N + LLG C
Sbjct: 28 RVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 87
Query: 125 GDERLLVAEYMPNETLAKHLFHWETH----------------------PMKWAMRLRVVL 162
G L+ EYM L + L H P+ A +L +
Sbjct: 88 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIAR 147
Query: 163 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------L 216
+A + Y + + ++ DL L E+ +++ FGL +N Y + +
Sbjct: 148 QVAAGMAYLSERKF-VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPI 206
Query: 217 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDS 271
+ PPE + R T ES ++++G +L ++ S P + +RD N+ ++
Sbjct: 207 RWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPEN 266
Query: 272 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315
C EL L C P +RP+ S+ L + +
Sbjct: 267 CPL---------ELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 301
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 129 bits (325), Expect = 1e-34
Identities = 63/262 (24%), Positives = 112/262 (42%), Gaps = 26/262 (9%)
Query: 72 VVYKGKLENQRR----IAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 126
VY G L + AVK NR+ + QFL E + + + +LLG C +
Sbjct: 42 CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE 101
Query: 127 ER-LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 185
L+V YM + L ++ ETH + L +A+ +++ SK ++ DL A
Sbjct: 102 GSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF-VHRDLAAR 159
Query: 186 RILFDEDGNPRLSTFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVTPESVIYS 237
+ DE +++ FGL ++ D + S + + + E L+T + T +S ++S
Sbjct: 160 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 219
Query: 238 FGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ---FTDDDGTELVRLASRCLQ 294
FG LL +L++ P D N +T L+G+ + L + +C
Sbjct: 220 FGVLLWELMTRGAPPYP-------DVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWH 272
Query: 295 YEPRERPNPKSLVTALSPLQKE 316
+ RP+ LV+ +S +
Sbjct: 273 PKAEMRPSFSELVSRISAIFST 294
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 128 bits (323), Expect = 2e-34
Identities = 45/256 (17%), Positives = 88/256 (34%), Gaps = 15/256 (5%)
Query: 61 IVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL 119
I+ E G+ A VYK + E A K + + + ++ E + + + LL
Sbjct: 16 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 75
Query: 120 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 179
+ ++ E+ + + E P+ + V AL Y ++
Sbjct: 76 DAFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDNK-IIH 133
Query: 180 HDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST----NLAFTPPEYLRT-----GRVT 230
DL A ILF DG+ +L+ FG+ + + PE +
Sbjct: 134 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 193
Query: 231 PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290
++ ++S G L+++ + PP H L+ + L++ +
Sbjct: 194 YKADVWSLGITLIEMAEIE--PPHHELNPM-RVLLKIAKSEPPTLAQPSRWSSNFKDFLK 250
Query: 291 RCLQYEPRERPNPKSL 306
+CL+ R L
Sbjct: 251 KCLEKNVDARWTTSQL 266
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 127 bits (319), Expect = 6e-34
Identities = 53/255 (20%), Positives = 96/255 (37%), Gaps = 28/255 (10%)
Query: 72 VVYKGKL---ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 127
V +G + Q +A+K + D + + EA+ + QL N + L+G C + +
Sbjct: 24 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEA 82
Query: 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 187
+LV E L K L + + ++ ++ ++Y K ++ DL A +
Sbjct: 83 LMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKNF-VHRDLAARNV 140
Query: 188 LFDEDGNPRLSTFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVTPESVIYSFGT 240
L ++S FGL K SY T L + PE + + + S ++S+G
Sbjct: 141 LLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGV 200
Query: 241 LLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 295
+ + LS P + I C EL L S C Y
Sbjct: 201 TMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPP---------ELYALMSDCWIY 251
Query: 296 EPRERPNPKSLVTAL 310
+ +RP+ ++ +
Sbjct: 252 KWEDRPDFLTVEQRM 266
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 126 bits (318), Expect = 1e-33
Identities = 60/272 (22%), Positives = 110/272 (40%), Gaps = 15/272 (5%)
Query: 43 EFTLEQLKNATSGFAVEN---IVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPR 98
E LE+L++ S + + G+ A VY + + +A+++ N P
Sbjct: 3 EEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE 62
Query: 99 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 158
+ E + + +N + N L GDE +V EY+ +L + M
Sbjct: 63 LIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIA 119
Query: 159 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF 218
V QALE+ S ++ D+ + IL DG+ +L+ FG +S + +
Sbjct: 120 AVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVG 178
Query: 219 TP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE 274
TP PE + P+ I+S G + ++++ G+ PP + +R + T+ E
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLRALY-LIATNGTPE 235
Query: 275 GQFTDDDGTELVRLASRCLQYEPRERPNPKSL 306
Q + +RCL + +R + K L
Sbjct: 236 LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKEL 267
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 126 bits (317), Expect = 3e-33
Identities = 54/275 (19%), Positives = 98/275 (35%), Gaps = 41/275 (14%)
Query: 72 VVYKGKLENQRR------IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNR-LTNLLGCCC 123
V + +AVK A R+ + E + + QL ++ + NLLG C
Sbjct: 52 KVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT 111
Query: 124 EGDERLLVAEYMPNETLAKHLF---------------------HWETHPMKWAMRLRVVL 162
L+ EY L +L + + + + L
Sbjct: 112 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAY 171
Query: 163 HLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 215
+A+ +E+ K H DL A +L ++ FGL ++ +Y
Sbjct: 172 QVAKGMEFLEFKS--CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLP 229
Query: 216 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 275
+ + PE L G T +S ++S+G LL ++ S P + D N L + +
Sbjct: 230 VKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP---GIPVDANFYKLIQNGFKM 286
Query: 276 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 310
E+ + C ++ R+RP+ +L + L
Sbjct: 287 DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 321
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (312), Expect = 1e-32
Identities = 56/270 (20%), Positives = 105/270 (38%), Gaps = 33/270 (12%)
Query: 72 VVYKGKLEN---QRRIAVKRFNRMAWPDP-RQFLEEARSVGQLRNNR-LTNLLGCCCEGD 126
V K +++ + A+KR A D R F E + +L ++ + NLLG C
Sbjct: 25 QVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 84
Query: 127 ERLLVAEYMPNETLAKHL--------------FHWETHPMKWAMRLRVVLHLAQALEYCT 172
L EY P+ L L + + L +A+ ++Y +
Sbjct: 85 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS 144
Query: 173 SKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN---LAFTPPEYLRTGRV 229
K ++ DL A IL E+ +++ FGL + + + + E L
Sbjct: 145 QKQF-IHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVY 203
Query: 230 TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG---QFTDDDGTELV 286
T S ++S+G LL +++S P L + +G + + E+
Sbjct: 204 TTNSDVWSYGVLLWEIVSLGGTPY-------CGMTCAELYEKLPQGYRLEKPLNCDDEVY 256
Query: 287 RLASRCLQYEPRERPNPKSLVTALSPLQKE 316
L +C + +P ERP+ ++ +L+ + +E
Sbjct: 257 DLMRQCWREKPYERPSFAQILVSLNRMLEE 286
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (312), Expect = 1e-32
Identities = 44/259 (16%), Positives = 97/259 (37%), Gaps = 19/259 (7%)
Query: 72 VVYKGKL-----ENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEG 125
VYKG + + +A+K P ++ L+EA + + N + LLG C
Sbjct: 24 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS 83
Query: 126 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 185
+L+ + MP L + + L + +A+ + Y + ++ DL A
Sbjct: 84 TVQLIT-QLMPFGCLLDY-VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL-VHRDLAAR 140
Query: 186 RILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFG 239
+L + +++ FGL K + + + E + T +S ++S+G
Sbjct: 141 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 200
Query: 240 TLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 299
+ +L++ P D I + + + ++ + +C +
Sbjct: 201 VTVWELMTFGSKPY----DGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADS 256
Query: 300 RPNPKSLVTALSPLQKETE 318
RP + L+ S + ++ +
Sbjct: 257 RPKFRELIIEFSKMARDPQ 275
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 122 bits (306), Expect = 3e-32
Identities = 51/260 (19%), Positives = 102/260 (39%), Gaps = 19/260 (7%)
Query: 72 VVYKGKLEN-----QRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLTNLLGCCCEG 125
VYKG L+ + +A+K R FL EA +GQ ++ + L G +
Sbjct: 22 EVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY 81
Query: 126 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 185
+++ EYM N + + ++ +A ++Y + + DL A
Sbjct: 82 KPMMIITEYMENGA-LDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYV-HRDLAAR 139
Query: 186 RILFDEDGNPRLSTFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVTPESVIYSF 238
IL + + ++S FGL + D + + +T PE + + T S ++SF
Sbjct: 140 NILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSF 199
Query: 239 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 298
G ++ ++++ P + + + + D + + +L +C Q E
Sbjct: 200 GIVMWEVMTYGERPYWE----LSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERA 255
Query: 299 ERPNPKSLVTALSPLQKETE 318
RP +V+ L L + +
Sbjct: 256 RRPKFADIVSILDKLIRAPD 275
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 122 bits (308), Expect = 4e-32
Identities = 53/276 (19%), Positives = 96/276 (34%), Gaps = 34/276 (12%)
Query: 72 VVYKGKL------ENQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNR-LTNLLGCCC 123
V + + +AVK A R+ + E + + L N+ + NLLG C
Sbjct: 38 KVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT 97
Query: 124 EGDERLLVAEYMPNETLAKHLFHW----------------ETHPMKWAMRLRVVLHLAQA 167
G L++ EY L L + + L +A+
Sbjct: 98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKG 157
Query: 168 LEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPP 221
+ + SK ++ DL A IL ++ FGL ++ ++ +Y + + P
Sbjct: 158 MAFLASKNC-IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP 216
Query: 222 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 281
E + T ES ++S+G L +L S P + D + +
Sbjct: 217 ESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG---MPVDSKFYKMIKEGFRMLSPEHA 273
Query: 282 GTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 317
E+ + C +P +RP K +V + E+
Sbjct: 274 PAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 121 bits (304), Expect = 6e-32
Identities = 46/247 (18%), Positives = 92/247 (37%), Gaps = 17/247 (6%)
Query: 72 VVYKGKL-ENQRRIAVKRFN--RMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 128
VYKG E +A ++ + ++F EEA + L++ + +
Sbjct: 24 TVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKG 83
Query: 129 ----LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLN 183
+LV E M + TL +L MK + + + L++ ++ + H DL
Sbjct: 84 KKCIVLVTELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLK 141
Query: 184 AYRILF-DEDGNPRLSTFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVTPESVIYSFGT 240
I G+ ++ GL R + + F PE + +Y+FG
Sbjct: 142 CDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGM 200
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 300
+L++ + ++ P S + + + +T F E+ + C++ ER
Sbjct: 201 CMLEMATSEY-PYSECQN--AAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDER 257
Query: 301 PNPKSLV 307
+ K L+
Sbjct: 258 YSIKDLL 264
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 122 bits (308), Expect = 8e-32
Identities = 54/290 (18%), Positives = 98/290 (33%), Gaps = 21/290 (7%)
Query: 72 VVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130
VV++ A K D +E +++ LR+ L NL + +E ++
Sbjct: 41 VVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVM 100
Query: 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF- 189
+ E+M L + + E + M + + + + L + ++ DL I+F
Sbjct: 101 IYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFT 158
Query: 190 -DEDGNPRLSTFGLMKNSRDGKSYST---NLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 245
+L FGL + +S F PE V + ++S G L L
Sbjct: 159 TKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYIL 218
Query: 246 LSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 305
LSG P + D ++ + + L +P R
Sbjct: 219 LSGL--SPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQ 276
Query: 306 L-----VTALSPLQKETEVPSHVLMGIPHS------ASVSPLSPLGEACS 344
+T + +++++PS I S A PL PLG +
Sbjct: 277 ALEHPWLTPGNAPGRDSQIPSSRYTKIRDSIKTKYDAWPEPLPPLGRISN 326
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 118 bits (296), Expect = 8e-31
Identities = 50/257 (19%), Positives = 90/257 (35%), Gaps = 20/257 (7%)
Query: 72 VVYKGKLE----NQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLRNNRLTNLLGCCCE 124
VV +G+ + +AVK P F+ E ++ L + L L G
Sbjct: 23 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT 82
Query: 125 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 184
+ +V E P +L R + +A+ + Y SK ++ DL A
Sbjct: 83 PPMK-MVTELAPLGSLLDR-LRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF-IHRDLAA 139
Query: 185 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVTPESVIYS 237
+L ++ FGLM+ + A+ PE L+T + S +
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 199
Query: 238 FGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 297
FG L ++ + P L + L + +D ++ + +C ++P
Sbjct: 200 FGVTLWEMFTYGQEPWI---GLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKP 256
Query: 298 RERPNPKSLVTALSPLQ 314
+RP +L L Q
Sbjct: 257 EDRPTFVALRDFLLEAQ 273
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 118 bits (296), Expect = 9e-31
Identities = 52/263 (19%), Positives = 99/263 (37%), Gaps = 27/263 (10%)
Query: 72 VVYKGKLENQRR----IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGD 126
V++G + +A+K R+ FL+EA ++ Q + + L+G E +
Sbjct: 22 DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-N 80
Query: 127 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 186
++ E L + + + A + L+ AL Y SK ++ D+ A
Sbjct: 81 PVWIIMELCTLGEL-RSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF-VHRDIAARN 138
Query: 187 ILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEY-----LRTGRVTPESVIYSFGTL 241
+L + +L FGL + D Y + P ++ + R T S ++ FG
Sbjct: 139 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 198
Query: 242 LLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 296
+ ++L P + + I + + +C L L ++C Y+
Sbjct: 199 MWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP---------TLYSLMTKCWAYD 249
Query: 297 PRERPNPKSLVTALSPLQKETEV 319
P RP L LS + +E +
Sbjct: 250 PSRRPRFTELKAQLSTILEEEKA 272
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 118 bits (297), Expect = 1e-30
Identities = 43/288 (14%), Positives = 90/288 (31%), Gaps = 50/288 (17%)
Query: 72 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEA--RSVGQLRNNRLTNLLGCCCEGD--- 126
V++GK +AVK F+ + R + EA LR+ + + + +
Sbjct: 18 EVWRGKWRG-EEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 73
Query: 127 -ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH----- 180
+ LV++Y + +L +L + + +++ L A L + +
Sbjct: 74 TQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 130
Query: 181 --DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY----STNLAFTP----PEYLRT---- 226
DL + IL ++G ++ GL + T PE L
Sbjct: 131 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM 190
Query: 227 --GRVTPESVIYSFGTLLLDLLSGKHIPPSHAL----------------DLIRDRNLQML 268
+ IY+ G + ++ I H ++ + Q L
Sbjct: 191 KHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKL 250
Query: 269 TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316
+ + + + ++ C R + LS L ++
Sbjct: 251 RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (293), Expect = 2e-30
Identities = 46/244 (18%), Positives = 76/244 (31%), Gaps = 15/244 (6%)
Query: 72 VVYKGK-LENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 129
V + +AVK + D P +E L + + G EG+ +
Sbjct: 20 EVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 79
Query: 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 189
L EY L + M R L + Y G + D+ +L
Sbjct: 80 LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGIGI-THRDIKPENLLL 136
Query: 190 DEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESV-IYSFGTLL 242
DE N ++S FGL R L + PE L+ E V ++S G +L
Sbjct: 137 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 196
Query: 243 LDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 302
+L+G+ + + + + D L+ + L P R
Sbjct: 197 TAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH---KILVENPSARIT 253
Query: 303 PKSL 306
+
Sbjct: 254 IPDI 257
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 117 bits (294), Expect = 7e-30
Identities = 45/241 (18%), Positives = 81/241 (33%), Gaps = 10/241 (4%)
Query: 72 VVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130
VV++ R K N D E + QL + +L NL + E +L
Sbjct: 44 VVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVL 103
Query: 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 190
+ E++ L + E + M A + + + L++ ++ D+ I+ +
Sbjct: 104 ILEFLSGGELFDRI-AAEDYKMSEAEVINYMRQACEGLKHMHEHSI-VHLDIKPENIMCE 161
Query: 191 --EDGNPRLSTFGLMKNSRDGKS---YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 245
+ + ++ FGL + + F PE + V + +++ G L L
Sbjct: 162 TKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVL 221
Query: 246 LSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 305
LSG P D + D + E LQ EPR+R
Sbjct: 222 LSGL--SPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHD 279
Query: 306 L 306
Sbjct: 280 A 280
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 114 bits (286), Expect = 6e-29
Identities = 38/252 (15%), Positives = 92/252 (36%), Gaps = 11/252 (4%)
Query: 61 IVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL 119
I + G +V++ +++ K ++ D +E + R+ + +L
Sbjct: 9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFV-KVKGTDQVLVKKEISILNIARHRNILHLH 67
Query: 120 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 179
+E +++ E++ + + + + + + V + +AL++ S +
Sbjct: 68 ESFESMEELVMIFEFISGLDIFERI-NTSAFELNEREIVSYVHQVCEALQFLHSHNIG-H 125
Query: 180 HDLNAYRILFDEDGNPR--LSTFGLMKNSRDGKSYSTN---LAFTPPEYLRTGRVTPESV 234
D+ I++ + + FG + + G ++ + PE + V+ +
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATD 185
Query: 235 IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 294
++S GTL+ LLSG P A + M + + + + E + R L
Sbjct: 186 MWSLGTLVYVLLSGI--NPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLV 243
Query: 295 YEPRERPNPKSL 306
E + R
Sbjct: 244 KERKSRMTASEA 255
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 113 bits (285), Expect = 6e-29
Identities = 41/242 (16%), Positives = 78/242 (32%), Gaps = 11/242 (4%)
Query: 72 VVYKGK-LENQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGDERL 129
V + Q+ +A+K + A E + ++++ + L G
Sbjct: 24 EVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLY 83
Query: 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA--LYHDLNAYRI 187
L+ + + L + E R++ + A++Y G N
Sbjct: 84 LIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYY 141
Query: 188 LFDEDGNPRLSTFGLMKNSRDGKSYST---NLAFTPPEYLRTGRVTPESVIYSFGTLLLD 244
DED +S FGL K G ST + PE L + +S G +
Sbjct: 142 SLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI 201
Query: 245 LLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 304
LL G PP + + + + + + + DD ++ +P +R +
Sbjct: 202 LLCGY--PPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCE 259
Query: 305 SL 306
Sbjct: 260 QA 261
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 112 bits (281), Expect = 1e-28
Identities = 41/253 (16%), Positives = 81/253 (32%), Gaps = 19/253 (7%)
Query: 72 VVYKGK-LENQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLRNNRLTNLLGCCCEGDE 127
V + L R A+K + E + +L + L + ++
Sbjct: 23 TVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEK 82
Query: 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 187
Y N L K++ + ALEY K ++ DL I
Sbjct: 83 LYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENI 139
Query: 188 LFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTL 241
L +ED + +++ FG K S+ + PE L S +++ G +
Sbjct: 140 LLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCI 199
Query: 242 LLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 301
+ L++G + LI + +++ E F + + L + L + +R
Sbjct: 200 IYQLVAGLPPFRAGNEYLIFQKIIKL------EYDFPEKFFPKARDLVEKLLVLDATKRL 253
Query: 302 NPKSLVTALSPLQ 314
+ +
Sbjct: 254 GCEEMEGYGPLKA 266
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 112 bits (280), Expect = 1e-28
Identities = 49/245 (20%), Positives = 86/245 (35%), Gaps = 20/245 (8%)
Query: 72 VVYKGK-LENQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLRNNRLTNLLGCCCE--- 124
V+ + L R +AVK DP +F EA++ L + + +
Sbjct: 22 EVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP 81
Query: 125 -GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLN 183
G +V EY+ TL + PM + V+ QAL + G ++ D+
Sbjct: 82 AGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNG-IIHRDVK 138
Query: 184 AYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL-------AFTPPEYLRTGRVTPESVIY 236
I+ ++ FG+ + D + T + PE R V S +Y
Sbjct: 139 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVY 198
Query: 237 SFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 296
S G +L ++L+G+ PP + + D + +L + + L
Sbjct: 199 SLGCVLYEVLTGE--PPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKN 256
Query: 297 PRERP 301
P R
Sbjct: 257 PENRY 261
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 111 bits (277), Expect = 6e-28
Identities = 54/271 (19%), Positives = 95/271 (35%), Gaps = 33/271 (12%)
Query: 72 VVYKG------KLENQRRIAVKRFNR-MAWPDPRQFLEEARSVGQLRN-NRLTNLLGCCC 123
V + K R +AVK + R + E + + + + + NLLG C
Sbjct: 28 QVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT 87
Query: 124 E-GDERLLVAEYMPNETLAKHLFHWETH--------------PMKWAMRLRVVLHLAQAL 168
+ G +++ E+ L+ +L + + +A+ +
Sbjct: 88 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGM 147
Query: 169 EYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPE 222
E+ S+ ++ DL A IL E ++ FGL ++ Y L + PE
Sbjct: 148 EFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 206
Query: 223 YLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 282
+ T +S ++SFG LL ++ S P + D + D
Sbjct: 207 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP---GVKIDEEFCRRLKEGTRMRAPDYTT 263
Query: 283 TELVRLASRCLQYEPRERPNPKSLVTALSPL 313
E+ + C EP +RP LV L L
Sbjct: 264 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 294
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 109 bits (272), Expect = 2e-27
Identities = 45/255 (17%), Positives = 82/255 (32%), Gaps = 25/255 (9%)
Query: 72 VVYKGK-LENQRRIAVKRFNRMAWPDP---------RQFLEEARSVGQLRNNRLT-NLLG 120
VV + + AVK + L+E + ++ + L
Sbjct: 18 VVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKD 77
Query: 121 CCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180
LV + M L +L E + +++ L + + +
Sbjct: 78 TYETNTFFFLVFDLMKKGELFDYLT--EKVTLSEKETRKIMRALLEVICALHKLNIV-HR 134
Query: 181 DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST---NLAFTPPEYLRTGRV------TP 231
DL IL D+D N +L+ FG G+ ++ PE +
Sbjct: 135 DLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGK 194
Query: 232 ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291
E ++S G ++ LL+G PP + + M + DD + L SR
Sbjct: 195 EVDMWSTGVIMYTLLAGS--PPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSR 252
Query: 292 CLQYEPRERPNPKSL 306
L +P++R +
Sbjct: 253 FLVVQPQKRYTAEEA 267
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 108 bits (271), Expect = 5e-27
Identities = 43/237 (18%), Positives = 86/237 (36%), Gaps = 18/237 (7%)
Query: 72 VVYKGK-LENQRRIAVKRFNRMAWPDPRQ---FLEEARSVGQLRNNRLTNLLGCCCEGDE 127
V+ + N R A+K + +Q +E + + + + + G + +
Sbjct: 19 RVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQ 78
Query: 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 187
++ +Y+ L ++ + + ALEY SK +Y DL I
Sbjct: 79 IFMIMDYIEGGEL--FSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENI 135
Query: 188 LFDEDGNPRLSTFGLMKNSRD-GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 246
L D++G+ +++ FG K D + + PE + T +SFG L+ ++L
Sbjct: 136 LLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEML 195
Query: 247 SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT--ELVRLASRCLQYEPRERP 301
+G D N + L + ++ L SR + + +R
Sbjct: 196 AGYTPFY--------DSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRL 244
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 108 bits (271), Expect = 1e-26
Identities = 47/240 (19%), Positives = 80/240 (33%), Gaps = 16/240 (6%)
Query: 72 VVYKGK-LENQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLRNNRLTN---LLGCCCE 124
VY + + + A+K ++ L E + + +
Sbjct: 19 EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT 78
Query: 125 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 184
D+ + + M L HL A + LE+ ++ +Y DL
Sbjct: 79 PDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNRFV-VYRDLKP 135
Query: 185 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--LAFTPPEYLRTGR-VTPESVIYSFGTL 241
IL DE G+ R+S GL + K +++ + PE L+ G + +S G +
Sbjct: 136 ANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCM 195
Query: 242 LLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 301
L LL G H + + LT + + D EL L LQ + R
Sbjct: 196 LFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV---ELPDSFSPELRSLLEGLLQRDVNRRL 252
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (269), Expect = 1e-26
Identities = 46/242 (19%), Positives = 84/242 (34%), Gaps = 22/242 (9%)
Query: 72 VVYKGK-LENQRRIAVKRFNRMAWPDP----RQFLEEARSVGQLRNNRLTNLLGCCCEGD 126
V+ + + + A+K + +E+ + LT++ +
Sbjct: 17 KVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE 76
Query: 127 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 186
V EY+ L H+ H + + L++ SKG +Y DL
Sbjct: 77 NLFFVMEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSKGI-VYRDLKLDN 133
Query: 187 ILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT----PPEYLRTGRVTPESVIYSFGTLL 242
IL D+DG+ +++ FG+ K + G + + T PE L + +SFG LL
Sbjct: 134 ILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLL 193
Query: 243 LDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG--TELVRLASRCLQYEPRER 300
++L G+ ++ + L S E L + EP +R
Sbjct: 194 YEMLIGQSPFH--------GQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKR 245
Query: 301 PN 302
Sbjct: 246 LG 247
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (261), Expect = 9e-26
Identities = 54/272 (19%), Positives = 94/272 (34%), Gaps = 35/272 (12%)
Query: 72 VVYKGKL--------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNR-LTNLLGC 121
V + ++AVK A D + E + + ++ + NLLG
Sbjct: 28 QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA 87
Query: 122 CCEGDERLLVAEYMPNETLAKHLFHWETHP--------------MKWAMRLRVVLHLAQA 167
C + ++ EY L ++L + + +A+
Sbjct: 88 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARG 147
Query: 168 LEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPP 221
+EY SK ++ DL A +L ED +++ FGL ++ Y + + P
Sbjct: 148 MEYLASKKC-IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 206
Query: 222 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 281
E L T +S ++SFG LL ++ + P + L L +
Sbjct: 207 EALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG----VPVEELFKLLKEGHRMDKPSNC 262
Query: 282 GTELVRLASRCLQYEPRERPNPKSLVTALSPL 313
EL + C P +RP K LV L +
Sbjct: 263 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (259), Expect = 1e-25
Identities = 38/249 (15%), Positives = 77/249 (30%), Gaps = 19/249 (7%)
Query: 72 VVYKGK-LENQRRIAVKRFNRMAWPDPRQ------FLEEARSVGQLRNNRLTNLLGCCCE 124
VV K + + A K + R+ E + ++++ + L
Sbjct: 25 VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN 84
Query: 125 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 184
+ +L+ E + L E + + + + Y S A + DL
Sbjct: 85 KTDVILILELVAGGELFDF--LAEKESLTEEEATEFLKQILNGVYYLHSLQIA-HFDLKP 141
Query: 185 YRILFDEDGNPR----LSTFGLMKNSRDGKSYSTNL---AFTPPEYLRTGRVTPESVIYS 237
I+ + P+ + FGL G + F PE + + E+ ++S
Sbjct: 142 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 201
Query: 238 FGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 297
G + LLSG + + E ++ + R L +P
Sbjct: 202 IGVITYILLSGASPFLGDTKQETLANVSAV--NYEFEDEYFSNTSALAKDFIRRLLVKDP 259
Query: 298 RERPNPKSL 306
++R +
Sbjct: 260 KKRMTIQDS 268
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (255), Expect = 3e-25
Identities = 50/248 (20%), Positives = 93/248 (37%), Gaps = 27/248 (10%)
Query: 72 VVYKGK-LENQRRIAVKRFNR------MAWPDPRQFLEEARSVGQLRNN--RLTNLLGCC 122
VY G + + +A+K + P+ + E + ++ + + LL
Sbjct: 19 SVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 78
Query: 123 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL 182
D +L+ E E ++ + + +A+ +C + G L+ D+
Sbjct: 79 ERPDSFVLILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEAVRHCHNCGV-LHRDI 136
Query: 183 NAYRILFDED-GNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRTGRVTPESV-IYSF 238
IL D + G +L FG +D + ++PPE++R R S ++S
Sbjct: 137 KDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 196
Query: 239 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 298
G LL D++ G P H ++IR + F +E L CL P
Sbjct: 197 GILLYDMVCGDI-PFEHDEEIIRGQVF-----------FRQRVSSECQHLIRWCLALRPS 244
Query: 299 ERPNPKSL 306
+RP + +
Sbjct: 245 DRPTFEEI 252
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 101 bits (251), Expect = 2e-24
Identities = 40/284 (14%), Positives = 81/284 (28%), Gaps = 32/284 (11%)
Query: 60 NIVSEH-------GEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR 111
N+V H GE + V+++G L N +++A+K R + D Q +E R+ L
Sbjct: 1 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLA 58
Query: 112 N-NRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEY 170
+ N+ EG +LV + + L + ++
Sbjct: 59 GCTGIPNVYYFGQEGLHNVLVIDLLGPSLE--DLLDLCGRKFSVKTVAMAAKQMLARVQS 116
Query: 171 CTSKGRALYHDLNAYRILFDE-----DGNPRLSTFGLMKNSRDGKSYSTN---------- 215
K +Y D+ L + FG++K RD +
Sbjct: 117 IHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSG 175
Query: 216 -LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT--DSC 272
+ + + + G + + L G + + ++ S
Sbjct: 176 TARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST 235
Query: 273 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316
+ E + P+ L S + +
Sbjct: 236 PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 279
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 99 bits (248), Expect = 4e-24
Identities = 38/264 (14%), Positives = 79/264 (29%), Gaps = 24/264 (9%)
Query: 72 VVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRN-NRLTNLLGCCCEGDERL 129
+Y G + +A+K Q E++ ++ + + C EGD +
Sbjct: 22 DIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 79
Query: 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 189
+V E + LF++ + L + + +EY SK ++ D+ L
Sbjct: 80 MVMELLGPSLE--DLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNF-IHRDVKPDNFLM 136
Query: 190 DEDGNPRL---STFGLMKNSRDGKSYSTN-----------LAFTPPEYLRTGRVTPESVI 235
L FGL K RD +++ + + +
Sbjct: 137 GLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDL 196
Query: 236 YSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD--SCLEGQFTDDDGTELVRLASRCL 293
S G +L+ G R + ++ S +E + C
Sbjct: 197 ESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCR 256
Query: 294 QYEPRERPNPKSLVTAL-SPLQKE 316
++P+ L + ++
Sbjct: 257 SLRFDDKPDYSYLRQLFRNLFHRQ 280
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 100 bits (249), Expect = 7e-24
Identities = 39/271 (14%), Positives = 94/271 (34%), Gaps = 37/271 (13%)
Query: 72 VVYKGK-LENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 129
+V N+ R+A+K+ + ++ L E + + + R+ + +
Sbjct: 23 MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 82
Query: 130 LVAEYMPNETLAKHLFHW-ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRIL 188
+ Y+ + L+ +T + + + + L+Y S L+ DL +L
Sbjct: 83 MKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV-LHRDLKPSNLL 141
Query: 189 FDEDGNPRLSTFGLMKNSRDGKSYST-------NLAFTPPEYLRTGRVTPESV-IYSFGT 240
+ + ++ FGL + + ++ + PE + + +S+ I+S G
Sbjct: 142 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 201
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE-------------------------G 275
+L ++LS + I P + L +L E
Sbjct: 202 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWN 261
Query: 276 QFTDDDGTELVRLASRCLQYEPRERPNPKSL 306
+ + ++ + L + L + P +R +
Sbjct: 262 RLFPNADSKALDLLDKMLTFNPHKRIEVEQA 292
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 98.8 bits (245), Expect = 1e-23
Identities = 46/268 (17%), Positives = 82/268 (30%), Gaps = 36/268 (13%)
Query: 72 VVYKGK-LENQRRIAVKRFNRMAWPD-----PRQFLEEARSVGQLRNNRLTNLLGCCCEG 125
VYK + + +A+K+ + R L E + + +L + + LL
Sbjct: 13 TVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK 72
Query: 126 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 185
LV ++M + + + + + +L Q LEY + DL
Sbjct: 73 SNISLVFDFMETDLE--VIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL-HRDLKPN 129
Query: 186 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT-----PPEYLRTGRVTPESVIYSFGT 240
+L DE+G +L+ FGL K+ T+ T P +++ G
Sbjct: 130 NLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGC 189
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE----------------------GQFT 278
+L +LL P + R + L E
Sbjct: 190 ILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIF 249
Query: 279 DDDGTELVRLASRCLQYEPRERPNPKSL 306
G +L+ L + P R
Sbjct: 250 SAAGDDLLDLIQGLFLFNPCARITATQA 277
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 98.0 bits (243), Expect = 2e-23
Identities = 44/276 (15%), Positives = 95/276 (34%), Gaps = 33/276 (11%)
Query: 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFN--RMAWPDPRQFLEEARSVGQLRNNRLTNL 118
+ + GE VVYK + A+K+ + P + E + +L+++ + L
Sbjct: 6 GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 119 LGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRAL 178
+LV E++ + L ++ +L L + YC + L
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDLK--KLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR-VL 122
Query: 179 YHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP-----PEYLRTGRVTPES 233
+ DL +L + +G +++ FGL + T+ T + + + +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTI 182
Query: 234 VIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG------------------ 275
I+S G + ++++G + P + R ++L +
Sbjct: 183 DIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYE 242
Query: 276 -----QFTDDDGTELVRLASRCLQYEPRERPNPKSL 306
F + L S+ L+ +P +R K
Sbjct: 243 PLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA 278
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.6 bits (237), Expect = 2e-22
Identities = 48/242 (19%), Positives = 87/242 (35%), Gaps = 17/242 (7%)
Query: 72 VVYKGK-LENQRRIAVKRFNR---MAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 127
V + R A+K + +A + + E+R + R+ LT L D
Sbjct: 20 KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDR 79
Query: 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 187
V EY L HL + A + ALEY S+ +Y D+ +
Sbjct: 80 LCFVMEYANGGELFFHLSRERVFTEERARFY--GAEIVSALEYLHSRDV-VYRDIKLENL 136
Query: 188 LFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLL 243
+ D+DG+ +++ FGL K + TP PE L + G ++
Sbjct: 137 MLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 196
Query: 244 DLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 303
+++ G+ + + + + L E +F E L + L+ +P++R
Sbjct: 197 EMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAKSLLAGLLKKDPKQRLGG 250
Query: 304 KS 305
Sbjct: 251 GP 252
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.2 bits (236), Expect = 3e-22
Identities = 39/249 (15%), Positives = 77/249 (30%), Gaps = 20/249 (8%)
Query: 72 VVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNR-LTNLLGCC----CEG 125
V + Q + A+K D + E + + ++
Sbjct: 27 KVLQIFNKRTQEKFALKMLQ-----DCPKARREVELHWRASQCPHIVRIVDVYENLYAGR 81
Query: 126 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 185
L+V E + L + ++ + +A++Y S A + D+
Sbjct: 82 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA-HRDVKPE 140
Query: 186 RILFD---EDGNPRLSTFGLMKNSRDGKSYSTN---LAFTPPEYLRTGRVTPESVIYSFG 239
+L+ + +L+ FG K + S +T + PE L + ++S G
Sbjct: 141 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLG 200
Query: 240 TLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG--TELVRLASRCLQYEP 297
++ LL G S+ I + E + E+ L L+ EP
Sbjct: 201 VIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEP 260
Query: 298 RERPNPKSL 306
+R
Sbjct: 261 TQRMTITEF 269
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.2 bits (236), Expect = 4e-22
Identities = 53/272 (19%), Positives = 89/272 (32%), Gaps = 43/272 (15%)
Query: 72 VVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER-- 128
VVY+ KL ++ +A+K+ + D R E + + +L + + L E+
Sbjct: 35 VVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKD 90
Query: 129 ----LLVAEYMPNETLAKHLFHWETH-PMKWAMRLRVVLHLAQALEYCTSKGRALYH-DL 182
LV +Y+P + + + L ++L Y S G + H D+
Sbjct: 91 EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDI 148
Query: 183 NAYRILFDEDGNP-RLSTFGLMKNSRDGKSYSTNLAFT----PPEYLRTGRVTPESVIYS 237
+L D D +L FG K G+ + + P T ++S
Sbjct: 149 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 238 FGTLLLDLLSGKHI----PPSHALDLI-------------------RDRNLQMLTDSCLE 274
G +L +LL G+ I L I + +
Sbjct: 209 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWT 268
Query: 275 GQFTDDDGTELVRLASRCLQYEPRERPNPKSL 306
F E + L SR L+Y P R P
Sbjct: 269 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEA 300
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.8 bits (232), Expect = 5e-22
Identities = 52/266 (19%), Positives = 99/266 (37%), Gaps = 33/266 (12%)
Query: 72 VVYKGK-LENQRRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 128
VVYK + +A+K R + P + E + +L + + LL ++
Sbjct: 17 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 76
Query: 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRIL 188
LV E++ ++ L K + + + + L Q L +C S R L+ DL +L
Sbjct: 77 YLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLL 134
Query: 189 FDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT-----PPEYLRTGRVTPESVIYSFGTLLL 243
+ +G +L+ FGL + T+ T P L + I+S G +
Sbjct: 135 INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 194
Query: 244 DLLSGKHI-PPSHALDLIRD--RNLQMLTDSCLEGQFTDDD------------------- 281
++++ + + P +D + R L + G + D
Sbjct: 195 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 254
Query: 282 -GTELVRLASRCLQYEPRERPNPKSL 306
+ L S+ L Y+P +R + K+
Sbjct: 255 LDEDGRSLLSQMLHYDPNKRISAKAA 280
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.0 bits (230), Expect = 1e-21
Identities = 47/281 (16%), Positives = 88/281 (31%), Gaps = 36/281 (12%)
Query: 61 IVSEHGEKAPNVVYKGK--LENQRRIAVKRFNRMAWPD--PRQFLEEA---RSVGQLRNN 113
V+E GE A V+K + R +A+KR + P + E R + +
Sbjct: 11 CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHP 70
Query: 114 RLTNLLGCCCEGDERLLVAEYMPNETLA----KHLFHWETHPMKWAMRLRVVLHLAQALE 169
+ L C + E + +L + ++ L + L+
Sbjct: 71 NVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 130
Query: 170 YCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN---LAFTPPEYLRT 226
+ S ++ DL IL G +L+ FGL + + ++ L + PE L
Sbjct: 131 FLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ 189
Query: 227 GRVTPESVIYSFGTLLLDLLSGKHI---------------------PPSHALDLIRDRNL 265
++S G + ++ K + D+ R
Sbjct: 190 SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA 249
Query: 266 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 306
+ +F D L +CL + P +R + S
Sbjct: 250 FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.3 bits (231), Expect = 2e-21
Identities = 36/267 (13%), Positives = 82/267 (30%), Gaps = 33/267 (12%)
Query: 72 VVYKGK-LENQRRIAVKRFNR--MAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 128
V ++A+K+ R + ++ E R + +R+ + LL +
Sbjct: 33 AVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETL 92
Query: 129 LLVAEYMPNETLAKHLFH--WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 186
++ + + +V + + L Y + G + DL
Sbjct: 93 DDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGII-HRDLKPGN 151
Query: 187 ILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF--TPPEYLRTGRVTPESVIYSFGTLLLD 244
+ +ED ++ FGL + + + + P L R T I+S G ++ +
Sbjct: 152 LAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAE 211
Query: 245 LLSGKHI-------------------PPSHALDLIRDRNLQMLTDSCLE------GQFTD 279
+++GK + PP+ + ++ + E
Sbjct: 212 MITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILT 271
Query: 280 DDGTELVRLASRCLQYEPRERPNPKSL 306
+ V L + L + +R
Sbjct: 272 NASPLAVNLLEKMLVLDAEQRVTAGEA 298
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 88.1 bits (217), Expect = 5e-20
Identities = 40/267 (14%), Positives = 78/267 (29%), Gaps = 35/267 (13%)
Query: 72 VVYKGK-LENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 128
V+K K E +A+KR + P L E + +L++ + L +
Sbjct: 17 TVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKL 76
Query: 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRIL 188
LV E+ + F + + + L + L +C S+ L+ DL +L
Sbjct: 77 TLVFEFCDQDLK--KYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV-LHRDLKPQNLL 133
Query: 189 FDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT-----PPEYLRTGRVTPESVIYSFGTLLL 243
+ +G +L+ FGL + + T P + ++S G +
Sbjct: 134 INRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFA 193
Query: 244 DLLSGKHIP------------------------PSHALDLIRDRNLQMLTDSCLEGQFTD 279
+L + L + M +
Sbjct: 194 ELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVP 253
Query: 280 DDGTELVRLASRCLQYEPRERPNPKSL 306
L L+ P +R + +
Sbjct: 254 KLNATGRDLLQNLLKCNPVQRISAEEA 280
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.6 bits (216), Expect = 1e-19
Identities = 47/292 (16%), Positives = 94/292 (32%), Gaps = 49/292 (16%)
Query: 61 IVSEHGEKAPNVVYKGK-LENQRRIAVKRFN--RMAWPDPRQFLEEARSVGQLRNNRLTN 117
+++ G+ V+K + + +++A+K+ P L E + + L++ + N
Sbjct: 14 KLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVN 73
Query: 118 LLGCCCEGDER--------LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALE 169
L+ C LV ++ ++ + RV+ L L
Sbjct: 74 LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI--KRVMQMLLNGLY 131
Query: 170 YCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--------LAFTPP 221
Y L+ D+ A +L DG +L+ FGL + K+ N L + PP
Sbjct: 132 YIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPP 190
Query: 222 EYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 280
E L R P ++ G ++ ++ + I + Q+ E D
Sbjct: 191 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 250
Query: 281 DGT--------------------------ELVRLASRCLQYEPRERPNPKSL 306
+ + L + L +P +R +
Sbjct: 251 NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 302
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 87.9 bits (217), Expect = 1e-19
Identities = 43/236 (18%), Positives = 78/236 (33%), Gaps = 14/236 (5%)
Query: 72 VVYKGK-LENQRRIAVKRFNRMAWPDPRQ---FLEEARSVGQLRNNRLTNLLGCCCEGDE 127
V K E+ A+K ++ +Q L E R + + L L +
Sbjct: 56 RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN 115
Query: 128 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 187
+V EY+ + HL + EY S +Y DL +
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENL 172
Query: 188 LFDEDGNPRLSTFGLMKNSRD-GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 246
L D+ G +++ FG K + + PE + + ++ G L+ ++
Sbjct: 173 LIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 247 SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 302
+G PP A I+ + +F ++L L LQ + +R
Sbjct: 233 AGY--PPFFADQPIQ----IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.7 bits (198), Expect = 3e-17
Identities = 43/246 (17%), Positives = 79/246 (32%), Gaps = 21/246 (8%)
Query: 72 VVYKGKL----ENQRRIAVKRFNRMAWPD----PRQFLEEARSVGQLRNNRLTNLLGCCC 123
V+ + + + A+K + E + + +R + L
Sbjct: 39 KVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF 98
Query: 124 EGDERLLVA-EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL 182
+ + +L + +Y+ L HL E V + ALE+ G +Y D+
Sbjct: 99 QTETKLHLILDYINGGELFTHLSQRERFTEHEVQI--YVGEIVLALEHLHKLG-IIYRDI 155
Query: 183 NAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRT-------GRVTPESVI 235
IL D +G+ L+ FGL K ++ EY+
Sbjct: 156 KLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDW 215
Query: 236 YSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 295
+S G L+ +LL+G P + E + + L R L
Sbjct: 216 WSLGVLMYELLTGA--SPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMK 273
Query: 296 EPRERP 301
+P++R
Sbjct: 274 DPKKRL 279
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.6 bits (190), Expect = 3e-16
Identities = 41/278 (14%), Positives = 83/278 (29%), Gaps = 33/278 (11%)
Query: 61 IVSEHGEKAPNVVYKGK-LENQRRIAVKRFNR--MAWPDPRQFLEEARSVGQLRNNRLTN 117
+S G A V + R+AVK+ +R + ++ E R + +++ +
Sbjct: 22 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 81
Query: 118 LLGCCCEGDERLLVAEYMPNETLAKHLFH--WETHPMKWAMRLRVVLHLAQALEYCTSKG 175
LL + L + + + ++ + + L+Y S
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 141
Query: 176 RALYHDLNAYRILFDEDGNPRLSTFGL--MKNSRDGKSYSTNLAFTPPEYLRTGRVTPES 233
+ DL + +ED ++ FGL + +T P L
Sbjct: 142 II-HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTV 200
Query: 234 VIYSFGTLLLDLLSGKH-------------------IPPSHALDLIRDRNLQMLTDSCLE 274
I+S G ++ +LL+G+ P + L I + + S +
Sbjct: 201 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ 260
Query: 275 ------GQFTDDDGTELVRLASRCLQYEPRERPNPKSL 306
V L + L + +R
Sbjct: 261 MPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 298
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 74.9 bits (183), Expect = 2e-15
Identities = 39/276 (14%), Positives = 88/276 (31%), Gaps = 50/276 (18%)
Query: 72 VVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNR-LTNLLGCCCEGDERL 129
V++ + N ++ VK + ++ E + + LR + L + R
Sbjct: 50 EVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRT 106
Query: 130 --LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 187
LV E++ N + + + + +AL+YC S G + D+ + +
Sbjct: 107 PALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIM-HRDVKPHNV 160
Query: 188 LFDEDGNP-RLSTFGLMKNSRDGKSYS----TNLAFTPPEYLRTGRVTPESVIYSFGTLL 242
+ D + RL +GL + G+ Y+ + P + ++S G +L
Sbjct: 161 MIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 220
Query: 243 LDLLSGKH--------------------------------IPPSHALDLIRDRNLQMLTD 270
++ K I + I R+ + +
Sbjct: 221 ASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWE 280
Query: 271 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 306
+ + E + + L+Y+ + R +
Sbjct: 281 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 316
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 72.0 bits (175), Expect = 3e-14
Identities = 41/299 (13%), Positives = 87/299 (29%), Gaps = 65/299 (21%)
Query: 72 VVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130
V+ K + N +A+K R +E + + ++ + T +LL
Sbjct: 28 TVWLAKDMVNNTHVAMKIV-RGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLL 86
Query: 131 VAEYMPNETLAKHLFHWETHPMKW--------------AMRLRVVLHLAQALEYCTSKGR 176
+ +E ++ L L+Y +
Sbjct: 87 DHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG 146
Query: 177 ALYHDLNAYRILFDEDGNP------RLSTFGLMKNSRDGKSYS-TNLAFTPPEYLRTGRV 229
++ D+ +L + +P +++ G + + S + PE L
Sbjct: 147 IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPW 206
Query: 230 TPESVIYSFGTLLLDLLSGKHI-------------------------PPSHALDLIRDRN 264
+ I+S L+ +L++G + PS+ L +
Sbjct: 207 GCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTR 266
Query: 265 LQMLTDSCLEG-----------------QFTDDDGTELVRLASRCLQYEPRERPNPKSL 306
+ L +F+ D+ E+ S LQ +PR+R + L
Sbjct: 267 TFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL 325
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.8 bits (167), Expect = 3e-13
Identities = 39/294 (13%), Positives = 88/294 (29%), Gaps = 54/294 (18%)
Query: 61 IVSEHGEKAPNVVYKGK-LENQRRIAVKRFNR--MAWPDPRQFLEEARSVGQLRNNRLTN 117
+ G A +V R +A+K+ +R ++ E + + + + +
Sbjct: 21 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 80
Query: 118 LLGCCC------EGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYC 171
LL E + LV E M + ++ + +++
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-----HERMSYLLYQMLCGIKHL 135
Query: 172 TSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN---LAFTPPEYLRTGR 228
S G ++ DL I+ D ++ FGL + + + + PE +
Sbjct: 136 HSAGI-IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 194
Query: 229 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE-------------- 274
I+S G ++ +++ K + P ++ ++ L C E
Sbjct: 195 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 254
Query: 275 ----------------------GQFTDDDGTELVRLASRCLQYEPRERPNPKSL 306
+ ++ L S+ L +P +R +
Sbjct: 255 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 308
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 47.7 bits (112), Expect = 7e-07
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 1/96 (1%)
Query: 386 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 445
K++G+ F + +A CY + I + Y R+LCYL P+ AL D +A
Sbjct: 8 KEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALE 66
Query: 446 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE 481
+ A + M +EA L+ +L
Sbjct: 67 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLA 102
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 47.1 bits (111), Expect = 9e-07
Identities = 17/147 (11%), Positives = 37/147 (25%), Gaps = 25/147 (17%)
Query: 72 VVYKGKLENQRRIAVKRFN----------RMAWPDPRQFLEEARSVGQLRNNRLTNLLGC 121
V+ E VK F A + L L G
Sbjct: 15 AVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGL 74
Query: 122 CC----EGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA 177
+ ++ E + E + ++ V+ + + + +
Sbjct: 75 AVPKVYAWEGNAVLMELI---------DAKELYRVRVENPDEVLDMILEEVAKFYHR-GI 124
Query: 178 LYHDLNAYRILFDEDGNPRLSTFGLMK 204
++ DL+ Y +L + + F
Sbjct: 125 VHGDLSQYNVLVS-EEGIWIIDFPQSV 150
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 170 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.7 bits (91), Expect = 3e-04
Identities = 19/126 (15%), Positives = 43/126 (34%), Gaps = 15/126 (11%)
Query: 371 SFQMWTDQMQETLNS-KKKGDVAFRQKDLKDAIECYTQFIDAGTMVS------------- 416
S++M +++ E K++G V F++ K A+ Y + + S
Sbjct: 1 SWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQAL 60
Query: 417 -PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALK 475
+ ++C+L A+ +A + + A A+ A+ +
Sbjct: 61 RLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQ 120
Query: 476 EGTTLE 481
+ L
Sbjct: 121 KVLQLY 126
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} Length = 153 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Score = 39.2 bits (90), Expect = 3e-04
Identities = 21/127 (16%), Positives = 46/127 (36%), Gaps = 16/127 (12%)
Query: 371 SFQMWTDQ-MQETLNSKKKGDVAFRQKDLKDAIECYTQF---------------IDAGTM 414
+ ++ +Q + K++G+ F++ ++ +AI Y + +D
Sbjct: 5 IYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKN 64
Query: 415 VSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVAL 474
+ + + CY + A++ A + I A Y A G EA+ L
Sbjct: 65 IEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENL 124
Query: 475 KEGTTLE 481
+ +L
Sbjct: 125 YKAASLN 131
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} Length = 192 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.7 bits (89), Expect = 7e-04
Identities = 12/92 (13%), Positives = 31/92 (33%), Gaps = 4/92 (4%)
Query: 379 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALN 438
+ E ++ +G +A +KD K A++ ++ D + Y + +A
Sbjct: 2 LVEAISLWNEGVLAADKKDWKGALDAFSAVQDP----HSRICFNIGCMYTILKNMTEAEK 57
Query: 439 DAMQAQIISPIWHIASYLQAAALSAMGMENEA 470
++ +A + + + A
Sbjct: 58 AFTRSINRDKHLAVAYFQRGMLYYQTEKYDLA 89
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Length = 388 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.3 bits (90), Expect = 8e-04
Identities = 16/110 (14%), Positives = 31/110 (28%), Gaps = 1/110 (0%)
Query: 367 ANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLC 426
A + + + V + Q + AI+ Y + I+ P Y +
Sbjct: 222 AVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPH-FPDAYCNLANA 280
Query: 427 YLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 476
+A + A + P + A G EA ++
Sbjct: 281 LKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRK 330
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Length = 128 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.2 bits (85), Expect = 8e-04
Identities = 15/97 (15%), Positives = 35/97 (36%), Gaps = 1/97 (1%)
Query: 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALND 439
++ L K+ G+ A+++KD A++ Y + + + T ++ Y
Sbjct: 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCREL 60
Query: 440 AMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 476
+A + A A + +G + K+
Sbjct: 61 CEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKD 97
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} Length = 168 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Score = 37.6 bits (86), Expect = 0.001
Identities = 21/126 (16%), Positives = 40/126 (31%), Gaps = 15/126 (11%)
Query: 371 SFQMWTDQMQETLNS-KKKGDVAFRQKDLKDAIECYTQFI--------------DAGTMV 415
S++M T + E K+KG V F+ A+ Y + + A
Sbjct: 3 SWEMDTKEKLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESF 62
Query: 416 SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALK 475
+ ++CYL A+ +A + Y + A M A+ +
Sbjct: 63 LLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFE 122
Query: 476 EGTTLE 481
+ +
Sbjct: 123 KVLEVN 128
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Length = 117 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Score = 35.4 bits (80), Expect = 0.003
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Query: 386 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 445
K+KG+ A ++ DA++CY++ I RS Y Q A D +
Sbjct: 7 KEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYS-NRSAAYAKKGDYQKAYEDGCKTVD 65
Query: 446 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE 481
+ P W +AAAL + EA+ +EG E
Sbjct: 66 LKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHE 101
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 491 | |||
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.9 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.83 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.79 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.79 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.76 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.74 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.72 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.7 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.7 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.67 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.66 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.63 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 99.61 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.59 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 99.59 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 99.56 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.55 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.53 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.53 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.44 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.43 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.42 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.36 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.29 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.29 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.27 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.23 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.21 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 99.21 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.2 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.17 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.14 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.13 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.12 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.1 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 99.06 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 99.03 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 99.01 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 98.94 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 98.88 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 98.87 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 98.8 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 98.79 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.66 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.66 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.61 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 98.48 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.46 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.38 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.38 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.27 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.22 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 98.16 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 98.16 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 98.07 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 98.04 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 97.94 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 97.8 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 97.67 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 97.64 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 97.32 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 97.16 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 97.0 | |
| d1wfda_ | 93 | Hypothetical protein 1500032H18Rik {Mouse (Mus mus | 87.67 | |
| d2crba1 | 83 | Nuclear receptor binding factor 2, NRBF2, N-termin | 82.02 | |
| d1wr0a1 | 77 | Vacuolar sorting protein 4b (VPS4B, SKD1 protein) | 81.33 | |
| d2crba1 | 83 | Nuclear receptor binding factor 2, NRBF2, N-termin | 81.28 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-55 Score=411.37 Aligned_cols=255 Identities=20% Similarity=0.281 Sum_probs=205.0
Q ss_pred CccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCC--CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
.+.+++++.||+|+||+||+|++++ .||||+++.... ...+.|.+|+.+|++++|||||++++++.. +..+||||
T Consensus 7 ~~~~~~~~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~E 83 (276)
T d1uwha_ 7 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQ 83 (276)
T ss_dssp TTCCCCCSEEEECSSCEEEEEESSS--EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred cccEEEEEEEeeCCCcEEEEEEECC--EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEe
Confidence 3456778889999999999998643 599999975432 235689999999999999999999998765 56899999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 209 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 209 (491)
|++||+|.+++.. ...++++..+..++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++.....
T Consensus 84 y~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~-ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~ 161 (276)
T d1uwha_ 84 WCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 161 (276)
T ss_dssp CCCEEEHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTSSEEECCCCCSCC--------
T ss_pred cCCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHhcCC-EeccccCHHHEEEcCCCCEEEccccceeeccccCCcc
Confidence 9999999999964 3457999999999999999999999998 999999999999999999999999999765322
Q ss_pred --CccccCCCCCCcccccC---CCCCCCccchhHHHHHHHHHhCCCCCCCchhh-HhhhccccccccccccCCCCchhHH
Q 011184 210 --KSYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLEGQFTDDDGT 283 (491)
Q Consensus 210 --~~~~~t~~y~aPE~~~~---~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (491)
....||+.|||||++.+ ..++.++|||||||++|||+||+.||...... .+..........+. ....+..+++
T Consensus 162 ~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~ 240 (276)
T d1uwha_ 162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPD-LSKVRSNCPK 240 (276)
T ss_dssp ----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCC-GGGSCTTCCH
T ss_pred cccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCc-chhccccchH
Confidence 24568999999999864 34788999999999999999999998653221 11111111111111 1123456678
Q ss_pred HHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 284 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 284 ~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
++.+|+.+||+.||.+|||+++|++.|+.+.+.
T Consensus 241 ~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~ 273 (276)
T d1uwha_ 241 AMKRLMAECLKKKRDERPLFPQILASIELLARS 273 (276)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHc
Confidence 999999999999999999999999999988753
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-54 Score=409.65 Aligned_cols=244 Identities=20% Similarity=0.265 Sum_probs=209.8
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
.|+++++||+|+||+||+|.. .+|+.||||+++.......+.+.+|+.++++++|||||++++++..++..||||||++
T Consensus 21 ~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~ 100 (293)
T d1yhwa1 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 100 (293)
T ss_dssp TBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred ccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecC
Confidence 588899999999999999994 5699999999976665567789999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----Ccc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSY 212 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~~~ 212 (491)
||+|.+++.. +.+++..+..++.||+.||.|||++| ||||||||+|||++.+|++||+|||+++..... ...
T Consensus 101 gg~L~~~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~~-iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~ 176 (293)
T d1yhwa1 101 GGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM 176 (293)
T ss_dssp TCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCC
T ss_pred CCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCcHHHeEECCCCcEeeccchhheeecccccccccc
Confidence 9999998853 56999999999999999999999999 999999999999999999999999999865432 345
Q ss_pred ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 011184 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 292 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 292 (491)
.||+.|+|||++.+..++.++|||||||++|+|++|+.||.............. ........+..++.++.+||.+|
T Consensus 177 ~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~---~~~~~~~~~~~~s~~~~~li~~~ 253 (293)
T d1yhwa1 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT---NGTPELQNPEKLSAIFRDFLNRC 253 (293)
T ss_dssp CSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH---HCSCCCSSGGGSCHHHHHHHHHH
T ss_pred ccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHh---CCCCCCCCcccCCHHHHHHHHHH
Confidence 689999999999999999999999999999999999999876543222111111 11112234556778999999999
Q ss_pred ccCCCCCCCChhHHHH
Q 011184 293 LQYEPRERPNPKSLVT 308 (491)
Q Consensus 293 l~~dp~~Rps~~~il~ 308 (491)
|+.||.+|||+.++++
T Consensus 254 L~~dP~~R~s~~eil~ 269 (293)
T d1yhwa1 254 LDMDVEKRGSAKELLQ 269 (293)
T ss_dssp TCSSTTTSCCHHHHTT
T ss_pred ccCChhHCcCHHHHhc
Confidence 9999999999999986
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.8e-55 Score=407.38 Aligned_cols=251 Identities=22% Similarity=0.327 Sum_probs=204.4
Q ss_pred ccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
+++++++.||+|+||+||+|.+.+++.||||+++... ...++|.+|++++++++|||||+++|+|..++..++||||++
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~ 83 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 83 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence 4567888999999999999999888899999997644 356789999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-----Cc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KS 211 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 211 (491)
+|+|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++++||+|||+++..... ..
T Consensus 84 ~g~L~~~l~~-~~~~~~~~~~~~i~~qia~gl~~lH~~~-iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~ 161 (263)
T d1sm2a_ 84 HGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 161 (263)
T ss_dssp TCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCTTCSGGGEEECGGGCEEECSCC---------------
T ss_pred CCcHHHHhhc-cccCCCHHHHHHHHHHHHHHHHhhhccc-eeecccchhheeecCCCCeEecccchheeccCCCceeecc
Confidence 9999999864 3467899999999999999999999998 999999999999999999999999999765432 23
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCC-CCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
..||+.|+|||++.+..++.++|||||||++|||+|+..|+ .......+...... ......+..+++++.+|+.
T Consensus 162 ~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~-----~~~~~~p~~~~~~l~~li~ 236 (263)
T d1sm2a_ 162 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST-----GFRLYKPRLASTHVYQIMN 236 (263)
T ss_dssp ---CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHH-----TCCCCCCTTSCHHHHHHHH
T ss_pred eecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHh-----cCCCCCccccCHHHHHHHH
Confidence 45789999999999999999999999999999999965444 33322222211111 1122334566789999999
Q ss_pred HhccCCCCCCCChhHHHHHhccccc
Q 011184 291 RCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
+||+.||++|||+++|++.|+.+..
T Consensus 237 ~cl~~~p~~Rps~~~il~~L~~i~e 261 (263)
T d1sm2a_ 237 HCWKERPEDRPAFSRLLRQLAEIAE 261 (263)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHccCCHhHCcCHHHHHHHHHHHHh
Confidence 9999999999999999999988753
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4.1e-55 Score=413.01 Aligned_cols=254 Identities=21% Similarity=0.327 Sum_probs=215.2
Q ss_pred CccccccccCCCCCccEEEEEEEC-CCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
.+.+++.++||+|+||+||+|++. +|+.||||+++... ...++|.+|+++|++++|||||+++++|.+++..++||||
T Consensus 16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~ 94 (287)
T d1opja_ 16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 94 (287)
T ss_dssp GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeec
Confidence 346778889999999999999964 58899999997654 3567899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCC----
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 210 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~---- 210 (491)
+++|+|.+++.......+++..+..|+.||+.||.|||+++ |+||||||+||||+.++++||+|||+++......
T Consensus 95 ~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~-iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~ 173 (287)
T d1opja_ 95 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 173 (287)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEE
T ss_pred ccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCC-cccCccccCeEEECCCCcEEEccccceeecCCCCceee
Confidence 99999999997655678999999999999999999999999 9999999999999999999999999998754432
Q ss_pred -ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCC-chhhHhhhccccccccccccCCCCchhHHHHHHH
Q 011184 211 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS-HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 288 (491)
Q Consensus 211 -~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (491)
...|++.|+|||++.+..++.++|||||||++|||++|..|+.. .....+.. ..........+..+++++.+|
T Consensus 174 ~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~-----~i~~~~~~~~~~~~~~~l~~l 248 (287)
T d1opja_ 174 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-----LLEKDYRMERPEGCPEKVYEL 248 (287)
T ss_dssp TTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH-----HHHTTCCCCCCTTCCHHHHHH
T ss_pred ccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHH-----HHhcCCCCCCCccchHHHHHH
Confidence 22467899999999999999999999999999999997766543 22222211 111122234556677899999
Q ss_pred HHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 289 ASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
+.+||+.||++|||+.+|++.|+.+...
T Consensus 249 i~~cl~~dP~~Rps~~ei~~~L~~~~~~ 276 (287)
T d1opja_ 249 MRACWQWNPSDRPSFAEIHQAFETMFQE 276 (287)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHTTSS
T ss_pred HHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999887654
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.8e-55 Score=416.61 Aligned_cols=266 Identities=22% Similarity=0.293 Sum_probs=209.7
Q ss_pred ccCHHHHHHHhcCCc------cccccccCCCCCccEEEEEEECC-CC---EEEEEEeCCCCCC-ChhHHHHHHHHHhccC
Q 011184 43 EFTLEQLKNATSGFA------VENIVSEHGEKAPNVVYKGKLEN-QR---RIAVKRFNRMAWP-DPRQFLEEARSVGQLR 111 (491)
Q Consensus 43 ~~~~~~~~~~~~~~~------~~~~i~~lG~G~~g~Vy~~~~~~-~~---~vavK~~~~~~~~-~~~~~~~E~~~l~~l~ 111 (491)
.++++++.+++.+|+ .+++.+.||+|+||+||+|.+.. ++ .||||++...... ..+.|.+|+++|++++
T Consensus 6 ~~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~ 85 (299)
T d1jpaa_ 6 PFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD 85 (299)
T ss_dssp GGGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCC
Confidence 455666777776653 45667789999999999999643 32 5899998654322 2457999999999999
Q ss_pred CCCcceEEeEeecCCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC
Q 011184 112 NNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 191 (491)
Q Consensus 112 H~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~ 191 (491)
|||||+++|+|..++..++||||++||+|.+++.. ....+++..+..++.||+.||.|||+++ ||||||||+||||+.
T Consensus 86 HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~-~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHrDlKp~NILl~~ 163 (299)
T d1jpaa_ 86 HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLADMN-YVHRDLAARNILVNS 163 (299)
T ss_dssp CTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECT
T ss_pred CCCCccEEEEEeeCCEEEEEEEecCCCcceeeecc-ccCCCCHHHHHHHHHHHHHHHHHHhhCC-CccCccccceEEECC
Confidence 99999999999999999999999999999998864 3457999999999999999999999998 999999999999999
Q ss_pred CCCeEEccCCCcccCCCCC---------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhh
Q 011184 192 DGNPRLSTFGLMKNSRDGK---------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIR 261 (491)
Q Consensus 192 ~~~~kl~Dfgla~~~~~~~---------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~ 261 (491)
++.+||+|||+++...... ...+|+.|||||.+.+..++.++|||||||++|||+| |+.||.......+.
T Consensus 164 ~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~ 243 (299)
T d1jpaa_ 164 NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVI 243 (299)
T ss_dssp TCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH
T ss_pred CCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHH
Confidence 9999999999998654321 2346889999999999999999999999999999998 78887655433322
Q ss_pred hccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 262 DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
...... .....+..++..+.+|+.+||+.||.+|||+.+|++.|+.+.+
T Consensus 244 ~~i~~~-----~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~ 292 (299)
T d1jpaa_ 244 NAIEQD-----YRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 292 (299)
T ss_dssp HHHHTT-----CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHHcC-----CCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 221111 1122355677899999999999999999999999999988754
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7e-55 Score=405.55 Aligned_cols=243 Identities=21% Similarity=0.293 Sum_probs=210.0
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCC---CCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
++|++++.||+|+||+||+|+. .+++.||||++... .......+.+|++++++++|||||++++++.+++..++||
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm 85 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL 85 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence 4578889999999999999996 46899999998632 2234667899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC--C
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--K 210 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--~ 210 (491)
||++||+|.+++.. ...+++..+..++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++..... .
T Consensus 86 Ey~~~g~L~~~l~~--~~~l~e~~~~~i~~qi~~al~~lH~~~-ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 162 (263)
T d2j4za1 86 EYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 162 (263)
T ss_dssp ECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCE
T ss_pred eecCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeeeeccccceecCCCCEeecccceeeecCCCccc
Confidence 99999999999974 457999999999999999999999999 999999999999999999999999999875543 3
Q ss_pred ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 211 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
...||+.|||||++.+..++.++|||||||++|||++|+.||.+............. ...++..+++++.+|+.
T Consensus 163 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~ 236 (263)
T d2j4za1 163 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV------EFTFPDFVTEGARDLIS 236 (263)
T ss_dssp ETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT------CCCCCTTSCHHHHHHHH
T ss_pred ccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcC------CCCCCccCCHHHHHHHH
Confidence 457899999999999999999999999999999999999999766543332221111 12345567789999999
Q ss_pred HhccCCCCCCCChhHHHH
Q 011184 291 RCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~ 308 (491)
+||+.||++|||++++++
T Consensus 237 ~~L~~dp~~R~t~~eil~ 254 (263)
T d2j4za1 237 RLLKHNPSQRPMLREVLE 254 (263)
T ss_dssp HHTCSSGGGSCCHHHHHT
T ss_pred HHccCCHhHCcCHHHHHc
Confidence 999999999999999987
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-55 Score=410.14 Aligned_cols=252 Identities=23% Similarity=0.333 Sum_probs=210.6
Q ss_pred CccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
+..+++++.||+|+||+||+|.+++++.||||+++... ...+.|.+|++++++++|||||+++|++.+ +..++||||+
T Consensus 12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~ 89 (272)
T d1qpca_ 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM 89 (272)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEeC
Confidence 34577888999999999999999888899999997644 356789999999999999999999998865 5679999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-----C
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----K 210 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~ 210 (491)
++|+|.+++......++++..++.|+.||+.||.|||+++ |+||||||+||||++++.+||+|||+++..... .
T Consensus 90 ~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~-ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~ 168 (272)
T d1qpca_ 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 168 (272)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCT
T ss_pred CCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCccchhheeeecccceeeccccceEEccCCcccccc
Confidence 9999999886544457999999999999999999999998 999999999999999999999999999875433 2
Q ss_pred ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCC-chhhHhhhccccccccccccCCCCchhHHHHHHHH
Q 011184 211 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS-HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 289 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 289 (491)
...||+.|+|||++.+..++.++|||||||++|||+||..|+.. .....+...... ......+..+++++.+|+
T Consensus 169 ~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~-----~~~~~~p~~~~~~l~~li 243 (272)
T d1qpca_ 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER-----GYRMVRPDNCPEELYQLM 243 (272)
T ss_dssp TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-----TCCCCCCTTCCHHHHHHH
T ss_pred ccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHh-----cCCCCCcccChHHHHHHH
Confidence 34678899999999988999999999999999999997655533 222222111111 112234556778999999
Q ss_pred HHhccCCCCCCCChhHHHHHhccccc
Q 011184 290 SRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
.+||+.||++|||+++|++.|+.+..
T Consensus 244 ~~cl~~~P~~Rpt~~ei~~~L~~~ft 269 (272)
T d1qpca_ 244 RLCWKERPEDRPTFDYLRSVLEDFFT 269 (272)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence 99999999999999999999987754
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-54 Score=409.27 Aligned_cols=246 Identities=16% Similarity=0.200 Sum_probs=207.8
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
.|++++.||+|+||+||+|.. .+|+.||||++........+.+.+|+++|++++|||||++++++.+++..+|||||++
T Consensus 13 ~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~ 92 (288)
T d2jfla1 13 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 92 (288)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred CeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCC
Confidence 368889999999999999995 5689999999987665567789999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----CCcc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSY 212 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~~~ 212 (491)
||+|.+++.. ..+++++..+..++.||+.||.|||+++ |+||||||+|||++.++++||+|||+++.... ....
T Consensus 93 ~g~L~~~~~~-~~~~l~e~~~~~i~~qi~~gL~ylH~~~-ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~ 170 (288)
T d2jfla1 93 GGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLHDNK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF 170 (288)
T ss_dssp TEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCC
T ss_pred CCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EEEeecChhheeECCCCCEEEEechhhhccCCCccccccc
Confidence 9999998764 2457999999999999999999999999 99999999999999999999999999875432 2356
Q ss_pred ccCCCCCCccccc-----CCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHH
Q 011184 213 STNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 287 (491)
Q Consensus 213 ~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (491)
.||+.|+|||++. +..++.++|||||||++|||+||+.||.+............. .......+..+++++.+
T Consensus 171 ~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~---~~~~~~~~~~~s~~~~~ 247 (288)
T d2jfla1 171 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS---EPPTLAQPSRWSSNFKD 247 (288)
T ss_dssp CSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHS---CCCCCSSGGGSCHHHHH
T ss_pred ccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC---CCCCCCccccCCHHHHH
Confidence 7899999999984 345889999999999999999999998764332222111111 11112234567789999
Q ss_pred HHHHhccCCCCCCCChhHHHH
Q 011184 288 LASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~ 308 (491)
||.+||+.||++|||++++++
T Consensus 248 li~~~L~~dp~~R~t~~ell~ 268 (288)
T d2jfla1 248 FLKKCLEKNVDARWTTSQLLQ 268 (288)
T ss_dssp HHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHccCChhHCcCHHHHhc
Confidence 999999999999999999976
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-54 Score=405.70 Aligned_cols=245 Identities=19% Similarity=0.174 Sum_probs=201.8
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
+|++++.||+|+||+||+|+. .+|+.||||++..... ...+.+.+|+++|++++|||||++++++.+++..+|||||+
T Consensus 6 dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~ 85 (271)
T d1nvra_ 6 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC 85 (271)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred ceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEecc
Confidence 578889999999999999995 5689999999965432 23567999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC------C
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------G 209 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~------~ 209 (491)
+||+|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+|+.... .
T Consensus 86 ~gg~L~~~l~--~~~~l~e~~~~~i~~qi~~al~ylH~~~-IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~ 162 (271)
T d1nvra_ 86 SGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 162 (271)
T ss_dssp TTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred CCCcHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHcC-CccCcccHHHEEECCCCCEEEccchhheeeccCCccccc
Confidence 9999999986 3567999999999999999999999999 99999999999999999999999999986432 2
Q ss_pred CccccCCCCCCcccccCCCC-CCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHH
Q 011184 210 KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 288 (491)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (491)
....||+.|||||++.+..+ +.++|||||||++|||++|+.||............ .............+++++.+|
T Consensus 163 ~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~s~~~~~l 239 (271)
T d1nvra_ 163 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD---WKEKKTYLNPWKKIDSAPLAL 239 (271)
T ss_dssp CCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHH---HHTTCTTSTTGGGSCHHHHHH
T ss_pred cceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHH---HhcCCCCCCccccCCHHHHHH
Confidence 34578999999999988776 57899999999999999999988654321111000 011111112234567899999
Q ss_pred HHHhccCCCCCCCChhHHHH
Q 011184 289 ASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~ 308 (491)
+.+||+.||++|||++++++
T Consensus 240 i~~~L~~dP~~R~t~~eil~ 259 (271)
T d1nvra_ 240 LHKILVENPSARITIPDIKK 259 (271)
T ss_dssp HHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHcCCChhHCcCHHHHhc
Confidence 99999999999999999976
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-53 Score=394.92 Aligned_cols=249 Identities=25% Similarity=0.348 Sum_probs=212.4
Q ss_pred ccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
++++++++||+|+||+||+|++++++.||||+++... ...+.|.+|+.++++++||||++++|+|.+++..++||||++
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~ 82 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA 82 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCc-CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence 3457788999999999999999888899999998654 356789999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-----Cc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KS 211 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 211 (491)
+|+|..++.. ....+++..+++++.||+.||.|||+++ |+||||||+|||+++++.+||+|||+++..... ..
T Consensus 83 ~g~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~~LH~~~-iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 160 (258)
T d1k2pa_ 83 NGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 160 (258)
T ss_dssp TEEHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHTT-BCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCC
T ss_pred CCcHHHhhhc-cccCCcHHHHHHHHHHHHHHHHHHhhcC-cccccccceeEEEcCCCcEEECcchhheeccCCCceeecc
Confidence 9999998764 3457899999999999999999999999 999999999999999999999999999754332 23
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
..+|+.|+|||.+.+..++.++|||||||++|||+| |+.||.......+....... .....|...++++.+|+.
T Consensus 161 ~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~-----~~~~~p~~~~~~l~~li~ 235 (258)
T d1k2pa_ 161 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG-----LRLYRPHLASEKVYTIMY 235 (258)
T ss_dssp SCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTT-----CCCCCCTTCCHHHHHHHH
T ss_pred cCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhC-----CCCCCcccccHHHHHHHH
Confidence 457889999999999999999999999999999998 78777665444333222211 122345566789999999
Q ss_pred HhccCCCCCCCChhHHHHHhccc
Q 011184 291 RCLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~L~~~ 313 (491)
+||+.||++|||+++|++.|..+
T Consensus 236 ~cl~~dP~~RPt~~eil~~L~di 258 (258)
T d1k2pa_ 236 SCWHEKADERPTFKILLSNILDV 258 (258)
T ss_dssp HTTCSSGGGSCCHHHHHHHHHCC
T ss_pred HHccCCHhHCcCHHHHHHHhhCC
Confidence 99999999999999999988653
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.9e-54 Score=401.43 Aligned_cols=247 Identities=17% Similarity=0.234 Sum_probs=197.9
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeec--CCeeEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCE--GDERLLV 131 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~--~~~~~lv 131 (491)
.+|++++.||+|+||+||+|+. .+|+.||||++....... .+.+.+|++++++++|||||++++++.+ ++.+|+|
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv 83 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 83 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence 4678889999999999999995 568999999997654332 4568899999999999999999999865 4568999
Q ss_pred EecCCCCCHHHHhccc--CCCCCCHHHHHHHHHHHHHHHHHHHhCC----CcccccccccceeeCCCCCeEEccCCCccc
Q 011184 132 AEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKG----RALYHDLNAYRILFDEDGNPRLSTFGLMKN 205 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~----~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 205 (491)
|||++||+|.+++... ....+++..++.++.||+.||.|||+++ +||||||||+|||++.++.+||+|||+++.
T Consensus 84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~ 163 (269)
T d2java1 84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 163 (269)
T ss_dssp EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence 9999999999988642 2467999999999999999999999864 399999999999999999999999999986
Q ss_pred CCCC----CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchh
Q 011184 206 SRDG----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 281 (491)
Q Consensus 206 ~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (491)
.... ....||+.|||||++.+..++.++|||||||++|||+||+.||.......+....... .....+..+
T Consensus 164 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~-----~~~~~~~~~ 238 (269)
T d2java1 164 LNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG-----KFRRIPYRY 238 (269)
T ss_dssp C-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT-----CCCCCCTTS
T ss_pred cccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcC-----CCCCCCccc
Confidence 5432 3457899999999999999999999999999999999999998765444332222111 112345567
Q ss_pred HHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 282 GTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 282 ~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
++++.+|+.+||+.||.+|||+.++++
T Consensus 239 s~~l~~li~~~L~~dp~~Rps~~ell~ 265 (269)
T d2java1 239 SDELNEIITRMLNLKDYHRPSVEEILE 265 (269)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 789999999999999999999999986
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.5e-53 Score=405.72 Aligned_cols=243 Identities=20% Similarity=0.223 Sum_probs=206.3
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCC---hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
|+++++||+|+||+||+|+. .+|+.||||++....... .+.+.+|+++|++++|||||++++++.+++..++||||
T Consensus 17 y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~ 96 (309)
T d1u5ra_ 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96 (309)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEe
Confidence 67888999999999999994 568999999997654332 34688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCCCcccc
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST 214 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 214 (491)
|++|+|..++. ..+++++..++.++.||+.||.|||+++ ||||||||+|||++.++.+||+|||++..........|
T Consensus 97 ~~~g~l~~~~~--~~~~l~e~~~~~i~~qi~~aL~yLH~~~-iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~G 173 (309)
T d1u5ra_ 97 CLGSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVG 173 (309)
T ss_dssp CSEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCS
T ss_pred cCCCchHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeccCCCcceEEECCCCCEEEeecccccccCCCCcccc
Confidence 99999987665 3467999999999999999999999999 99999999999999999999999999998877778889
Q ss_pred CCCCCCcccccC---CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 215 NLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 215 t~~y~aPE~~~~---~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
|+.|||||++.+ +.++.++|||||||++|||++|..||............... ......+..+++++.+||.+
T Consensus 174 T~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~----~~~~~~~~~~s~~~~~li~~ 249 (309)
T d1u5ra_ 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----ESPALQSGHWSEYFRNFVDS 249 (309)
T ss_dssp CGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS----CCCCCSCTTSCHHHHHHHHH
T ss_pred CccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC----CCCCCCCCCCCHHHHHHHHH
Confidence 999999999864 45899999999999999999999998754332221111111 11112234567899999999
Q ss_pred hccCCCCCCCChhHHHH
Q 011184 292 CLQYEPRERPNPKSLVT 308 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~ 308 (491)
||+.||.+|||++++++
T Consensus 250 ~L~~dP~~Rpt~~ell~ 266 (309)
T d1u5ra_ 250 CLQKIPQDRPTSEVLLK 266 (309)
T ss_dssp HTCSSGGGSCCHHHHTT
T ss_pred HCcCChhHCcCHHHHHh
Confidence 99999999999999987
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.9e-53 Score=402.83 Aligned_cols=245 Identities=16% Similarity=0.197 Sum_probs=194.3
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
|++++.||+|+||+||+|.. .+|+.||||++...... ....+.+|+.+|++++|||||++++++.+++..||||||++
T Consensus 11 Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~~ 90 (307)
T d1a06a_ 11 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVS 90 (307)
T ss_dssp EEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred eEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccC
Confidence 78888999999999999995 46899999999754422 34568899999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeC---CCCCeEEccCCCcccCCCC---C
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD---EDGNPRLSTFGLMKNSRDG---K 210 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~---~~~~~kl~Dfgla~~~~~~---~ 210 (491)
||+|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||+. +++.+||+|||+++..... .
T Consensus 91 gg~L~~~l~~--~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~ 167 (307)
T d1a06a_ 91 GGELFDRIVE--KGFYTERDASRLIFQVLDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS 167 (307)
T ss_dssp SCBHHHHHHT--CSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSTTCCEEECCC-------------
T ss_pred CCcHHHhhhc--ccCCCHHHHHHHHHHHHHHHHhhhhce-eeeEEecccceeecccCCCceEEEeccceeEEccCCCeee
Confidence 9999999973 567999999999999999999999999 99999999999994 5789999999999865433 3
Q ss_pred ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 211 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
...||+.|||||++.+..++.++|||||||++|||++|+.||.+............... ......+..+++++.+|+.
T Consensus 168 ~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li~ 245 (307)
T d1a06a_ 168 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEY--EFDSPYWDDISDSAKDFIR 245 (307)
T ss_dssp -----CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCC--CCCTTTTTTSCHHHHHHHH
T ss_pred eeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCC--CCCCccccCCCHHHHHHHH
Confidence 45799999999999999999999999999999999999999977654433322222111 1122234567789999999
Q ss_pred HhccCCCCCCCChhHHHH
Q 011184 291 RCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~ 308 (491)
+||+.||++|||++++++
T Consensus 246 ~~L~~dP~~R~s~~eil~ 263 (307)
T d1a06a_ 246 HLMEKDPEKRFTCEQALQ 263 (307)
T ss_dssp HHSCSSGGGSCCHHHHHH
T ss_pred HHccCCHhHCcCHHHHhc
Confidence 999999999999999998
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-53 Score=408.91 Aligned_cols=248 Identities=19% Similarity=0.224 Sum_probs=202.6
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCC-hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecC
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
+|++++.||+|+||+||+|+. .+|+.||||+++...... ...+.+|+.+|++++|||||+++++|.+++..+|||||+
T Consensus 7 ~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy~ 86 (322)
T d1s9ja_ 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 86 (322)
T ss_dssp GEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred CCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence 577888999999999999995 568999999997654333 467899999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccccceeeCCCCCeEEccCCCcccCC--CCCcc
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR--DGKSY 212 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~--~~~~~ 212 (491)
+||+|.+++.+ .+.+++..+..++.||+.||.|||++ + |+||||||+|||++.+|++||+|||+|+... .....
T Consensus 87 ~gg~L~~~l~~--~~~l~~~~~~~~~~qil~aL~yLH~~~~-IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~ 163 (322)
T d1s9ja_ 87 DGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 163 (322)
T ss_dssp TTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHC-CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC---
T ss_pred CCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHhCC-EEccccCHHHeeECCCCCEEEeeCCCccccCCCccccc
Confidence 99999999974 35799999999999999999999975 7 9999999999999999999999999998543 23456
Q ss_pred ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccc-------------------------
Q 011184 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM------------------------- 267 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~------------------------- 267 (491)
.||+.|+|||++.+..++.++||||+||++|||++|+.||.+.............
T Consensus 164 ~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (322)
T d1s9ja_ 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMD 243 (322)
T ss_dssp CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC----------------------------
T ss_pred cCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccc
Confidence 8999999999999999999999999999999999999998654321110000000
Q ss_pred -------------cccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 268 -------------LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 268 -------------~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
..............+.++.+|+.+||+.||.+|||++++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~ 297 (322)
T d1s9ja_ 244 SRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297 (322)
T ss_dssp --CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 00000000111234678999999999999999999999997
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-53 Score=401.63 Aligned_cols=243 Identities=18% Similarity=0.197 Sum_probs=207.5
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCC---CCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
++|++++.||+|+||+||+|.. .+|+.||||++... .....+.+.+|++++++++||||+++++++.+++..|+||
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm 87 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 87 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence 4578889999999999999995 56899999998642 2234567999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC---
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 209 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 209 (491)
||++||+|.+++.. .+.+++..+..++.|++.||.|||+.+ ||||||||+|||+++++.+||+|||+++.....
T Consensus 88 Ey~~gg~L~~~~~~--~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~ 164 (288)
T d1uu3a_ 88 SYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 164 (288)
T ss_dssp CCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred EccCCCCHHHhhhc--cCCCCHHHHHHHHHHHHHHHHhhcccc-EEcCcCCccccccCCCceEEecccccceecccCCcc
Confidence 99999999998864 467999999999999999999999999 999999999999999999999999999865422
Q ss_pred ---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHH
Q 011184 210 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.......+....... ...++..+++++.
T Consensus 165 ~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~ 238 (288)
T d1uu3a_ 165 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL------EYDFPEKFFPKAR 238 (288)
T ss_dssp -----CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTT------CCCCCTTCCHHHH
T ss_pred cccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcC------CCCCCccCCHHHH
Confidence 2456899999999999999999999999999999999999999765443333222211 1234556778999
Q ss_pred HHHHHhccCCCCCCCChhHHHH
Q 011184 287 RLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~ 308 (491)
+||.+||+.||.+|||++|++.
T Consensus 239 ~li~~~L~~dP~~R~t~~e~~~ 260 (288)
T d1uu3a_ 239 DLVEKLLVLDATKRLGCEEMEG 260 (288)
T ss_dssp HHHHTTSCSSGGGSTTSGGGTC
T ss_pred HHHHHHccCCHhHCcCHHHHcC
Confidence 9999999999999999999754
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.2e-53 Score=397.28 Aligned_cols=253 Identities=24% Similarity=0.332 Sum_probs=208.8
Q ss_pred ccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
..+++.+.||+|+||+||+|++++++.||||+++... ...+.|.+|+.++++++|||||+++++|.+ +..++||||++
T Consensus 17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~Ey~~ 94 (285)
T d1fmka3 17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 94 (285)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred HHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEEecC
Confidence 5678888999999999999999888899999997554 356789999999999999999999999854 56899999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-----Cc
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KS 211 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-----~~ 211 (491)
+|+|..++.......+++..++.++.||+.||.|||+.+ |+||||||+||||+.++++||+|||+++..... ..
T Consensus 95 ~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~-ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 173 (285)
T d1fmka3 95 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 173 (285)
T ss_dssp TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred CCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhh-eecccccceEEEECCCCcEEEcccchhhhccCCCceeecc
Confidence 999999987544567999999999999999999999999 999999999999999999999999999865332 23
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCc-hhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
..||+.|+|||++..+.++.++|||||||++|||++|..|+... ....+....... .....+..+++++.+|+.
T Consensus 174 ~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l~~li~ 248 (285)
T d1fmka3 174 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-----YRMPCPPECPESLHDLMC 248 (285)
T ss_dssp --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-----CCCCCCTTSCHHHHHHHH
T ss_pred ccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhc-----CCCCCCcccCHHHHHHHH
Confidence 45789999999999999999999999999999999977665433 222121111111 122345567789999999
Q ss_pred HhccCCCCCCCChhHHHHHhccccccC
Q 011184 291 RCLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
+||+.||++|||+++|++.|+.+....
T Consensus 249 ~cl~~dP~~Rps~~~i~~~L~~~~~~~ 275 (285)
T d1fmka3 249 QCWRKEPEERPTFEYLQAFLEDYFTST 275 (285)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred HHcccCHhHCcCHHHHHHHHhhhhcCC
Confidence 999999999999999999999877543
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.9e-53 Score=397.25 Aligned_cols=244 Identities=21% Similarity=0.264 Sum_probs=203.0
Q ss_pred cCCCCCccEEEEEEEC---CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCCC
Q 011184 64 EHGEKAPNVVYKGKLE---NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 139 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~gs 139 (491)
+||+|+||+||+|++. ++..||||+++..... ..+.|.+|+++|++++|||||+++|++.. +..+|||||++||+
T Consensus 16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~~~~g~ 94 (285)
T d1u59a_ 16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 94 (285)
T ss_dssp EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEE
T ss_pred EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEEeCCCCc
Confidence 4799999999999853 3557999999765422 24679999999999999999999999865 56899999999999
Q ss_pred HHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-------Ccc
Q 011184 140 LAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-------KSY 212 (491)
Q Consensus 140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-------~~~ 212 (491)
|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 95 L~~~l~~-~~~~l~~~~~~~i~~qi~~gL~ylH~~~-iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~ 172 (285)
T d1u59a_ 95 LHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 172 (285)
T ss_dssp HHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSS
T ss_pred HHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCcCchhheeeccCCceeeccchhhhccccccccccccccc
Confidence 9998854 3457999999999999999999999998 999999999999999999999999999865432 234
Q ss_pred ccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
.||+.|+|||++.+..++.++|||||||++|||+| |+.||.......+...... ......+..+++++.+||.+
T Consensus 173 ~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~-----~~~~~~p~~~~~~l~~li~~ 247 (285)
T d1u59a_ 173 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ-----GKRMECPPECPPELYALMSD 247 (285)
T ss_dssp CCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHT-----TCCCCCCTTCCHHHHHHHHH
T ss_pred ccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCcCCHHHHHHHHH
Confidence 57889999999998999999999999999999998 8888865433322221111 11234456778899999999
Q ss_pred hccCCCCCCCChhHHHHHhccccc
Q 011184 292 CLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
||+.||++|||+.+|++.|+....
T Consensus 248 cl~~~p~~RPs~~~i~~~L~~~~~ 271 (285)
T d1u59a_ 248 CWIYKWEDRPDFLTVEQRMRACYY 271 (285)
T ss_dssp TTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HcCCCHhHCcCHHHHHHHHHHHHH
Confidence 999999999999999999876543
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-53 Score=396.93 Aligned_cols=242 Identities=21% Similarity=0.267 Sum_probs=199.2
Q ss_pred cCCCCCccEEEEEEECC---CCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCCCC
Q 011184 64 EHGEKAPNVVYKGKLEN---QRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 138 (491)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~~g 138 (491)
+||+|+||+||+|.+++ ++.||||+++...... .+.|.+|+++|++++|||||+++++|.. +..+|||||+++|
T Consensus 14 ~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~g 92 (277)
T d1xbba_ 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELG 92 (277)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTTE
T ss_pred CcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCCC
Confidence 58999999999998543 4689999997543322 4579999999999999999999999965 4578999999999
Q ss_pred CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-------Cc
Q 011184 139 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-------KS 211 (491)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-------~~ 211 (491)
+|.+++.. ...+++..++.|+.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++..... ..
T Consensus 93 ~L~~~l~~--~~~l~~~~~~~i~~qi~~gl~ylH~~~-iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 169 (277)
T d1xbba_ 93 PLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 169 (277)
T ss_dssp EHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC---
T ss_pred cHHHHHhh--ccCCCHHHHHHHHHHHHHHHhhHHhCC-cccCCCcchhhcccccCcccccchhhhhhccccccccccccc
Confidence 99999873 467999999999999999999999998 999999999999999999999999999865432 12
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
..||+.|+|||++.+..++.++|||||||++|||+| |+.||.+.....+...... ......+..++.++.+|+.
T Consensus 170 ~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~-----~~~~~~p~~~~~~~~~li~ 244 (277)
T d1xbba_ 170 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK-----GERMGCPAGCPREMYDLMN 244 (277)
T ss_dssp -CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-----TCCCCCCTTCCHHHHHHHH
T ss_pred cCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCcccCHHHHHHHH
Confidence 357899999999999999999999999999999998 8888876443332221111 1122345667789999999
Q ss_pred HhccCCCCCCCChhHHHHHhcccc
Q 011184 291 RCLQYEPRERPNPKSLVTALSPLQ 314 (491)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~L~~~~ 314 (491)
+||+.||.+|||+++|++.|+.+.
T Consensus 245 ~cl~~dp~~RPs~~~i~~~L~~~~ 268 (277)
T d1xbba_ 245 LCWTYDVENRPGFAAVELRLRNYY 268 (277)
T ss_dssp HHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred HHcCCCHhHCcCHHHHHHHhhCHH
Confidence 999999999999999999887654
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=8.5e-53 Score=407.60 Aligned_cols=250 Identities=18% Similarity=0.165 Sum_probs=211.9
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
|+.|++++.||+|+||+||+|.. .+|+.||||+++.....+...+.+|+.+|++++|||||+++++|.+++..+|||||
T Consensus 28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~ 107 (352)
T d1koba_ 28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 107 (352)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 45688999999999999999995 56999999999765444456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeC--CCCCeEEccCCCcccCCCCC--
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD--EDGNPRLSTFGLMKNSRDGK-- 210 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~--~~~~~kl~Dfgla~~~~~~~-- 210 (491)
|+||+|.+++.. ...++++..++.|+.||+.||.|||++| ||||||||+||||+ .++.+||+|||+++......
T Consensus 108 ~~gg~L~~~~~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~-iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~ 185 (352)
T d1koba_ 108 LSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHS-IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 185 (352)
T ss_dssp CCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred CCCChHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccccccccccccCCCeEEEeecccceecCCCCce
Confidence 999999988754 3457999999999999999999999999 99999999999997 67899999999998765443
Q ss_pred -ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHH
Q 011184 211 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 289 (491)
Q Consensus 211 -~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 289 (491)
...||+.|+|||++.+..++.++|||||||++|+|+||+.||.+.............. .......+..+++++.+||
T Consensus 186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~s~~~~~li 263 (352)
T d1koba_ 186 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCD--WEFDEDAFSSVSPEAKDFI 263 (352)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCC--CCCCSSTTTTSCHHHHHHH
T ss_pred eeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CCCCcccccCCCHHHHHHH
Confidence 3468999999999999999999999999999999999999997654433222211111 1112233456778999999
Q ss_pred HHhccCCCCCCCChhHHHHH
Q 011184 290 SRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~ 309 (491)
.+||+.||.+|||+.++++.
T Consensus 264 ~~~L~~dp~~R~s~~eil~H 283 (352)
T d1koba_ 264 KNLLQKEPRKRLTVHDALEH 283 (352)
T ss_dssp HTTSCSSGGGSCCHHHHHTS
T ss_pred HHHccCChhHCcCHHHHhcC
Confidence 99999999999999999873
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-52 Score=392.08 Aligned_cols=243 Identities=19% Similarity=0.252 Sum_probs=197.6
Q ss_pred ccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeec----CCeeEEE
Q 011184 59 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCE----GDERLLV 131 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~----~~~~~lv 131 (491)
+++..+||+|+||+||+|+. .+++.||+|++...... ..+.+.+|+++|++++|||||++++++.. +..+++|
T Consensus 11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv 90 (270)
T d1t4ha_ 11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 90 (270)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence 35556789999999999995 46889999998654322 24578999999999999999999999864 3468999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccccceeeC-CCCCeEEccCCCcccCCCC
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDG 209 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-~iiH~Dlkp~Nill~-~~~~~kl~Dfgla~~~~~~ 209 (491)
|||++||+|.+++.. ...+++..+..++.||+.||.|||+++ +|+||||||+|||++ +++.+||+|||+++.....
T Consensus 91 mE~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~ 168 (270)
T d1t4ha_ 91 TELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 168 (270)
T ss_dssp EECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred EeCCCCCcHHHHHhc--cccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCC
Confidence 999999999999964 457999999999999999999999975 399999999999996 5799999999999865433
Q ss_pred --CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchh-hHhhhccccccccccccCCCCchhHHHHH
Q 011184 210 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNLQMLTDSCLEGQFTDDDGTELV 286 (491)
Q Consensus 210 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (491)
....||+.|||||++.+ .++.++|||||||++|||++|+.||..... ..+......... ...++...++++.
T Consensus 169 ~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~----~~~~~~~~~~~~~ 243 (270)
T d1t4ha_ 169 FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK----PASFDKVAIPEVK 243 (270)
T ss_dssp SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC----CGGGGGCCCHHHH
T ss_pred ccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCC----CcccCccCCHHHH
Confidence 34579999999999875 699999999999999999999999865322 212111111111 1122334567899
Q ss_pred HHHHHhccCCCCCCCChhHHHH
Q 011184 287 RLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~ 308 (491)
+||.+||+.||++|||++|+++
T Consensus 244 ~li~~~l~~dp~~R~s~~ell~ 265 (270)
T d1t4ha_ 244 EIIEGCIRQNKDERYSIKDLLN 265 (270)
T ss_dssp HHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHccCCHhHCcCHHHHhC
Confidence 9999999999999999999987
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-52 Score=396.11 Aligned_cols=251 Identities=22% Similarity=0.288 Sum_probs=201.3
Q ss_pred ccccccCCCCCccEEEEEEECC-C----CEEEEEEeCCCCCCC-hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 59 ENIVSEHGEKAPNVVYKGKLEN-Q----RRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~~-~----~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
+++.+.||+|+||+||+|.+++ + ..||||+++...... ...|.+|+.++++++|||||+++|++...+..++||
T Consensus 9 ~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~ 88 (283)
T d1mqba_ 9 VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIIT 88 (283)
T ss_dssp EEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred eEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEE
Confidence 4455667999999999999643 2 369999997544222 346899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC---
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 209 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~--- 209 (491)
||+.+++|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++.....
T Consensus 89 e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~i~~gl~~lH~~~-iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~ 166 (283)
T d1mqba_ 89 EYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 166 (283)
T ss_dssp ECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC----------
T ss_pred EecccCcchhhhhc-ccccccHHHHHHHHHHHHHhhhhccccc-cccCccccceEEECCCCeEEEcccchhhcccCCCcc
Confidence 99999999988764 3467999999999999999999999998 999999999999999999999999999864332
Q ss_pred ----CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCc-hhhHhhhccccccccccccCCCCchhHHH
Q 011184 210 ----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNLQMLTDSCLEGQFTDDDGTE 284 (491)
Q Consensus 210 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (491)
....||+.|+|||++.+..++.++|||||||++|||++|..|+... ....+.... ........+..++..
T Consensus 167 ~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i-----~~~~~~~~~~~~~~~ 241 (283)
T d1mqba_ 167 TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI-----NDGFRLPTPMDCPSA 241 (283)
T ss_dssp -------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH-----HTTCCCCCCTTCBHH
T ss_pred ceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHH-----hccCCCCCchhhHHH
Confidence 1235788999999999999999999999999999999976665432 222121111 111222345567789
Q ss_pred HHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 285 LVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 285 ~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
+.+|+.+||+.||++|||+.+|++.|+.+.+.
T Consensus 242 l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~ 273 (283)
T d1mqba_ 242 IYQLMMQCWQQERARRPKFADIVSILDKLIRA 273 (283)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence 99999999999999999999999999887653
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=1.5e-52 Score=405.46 Aligned_cols=248 Identities=18% Similarity=0.155 Sum_probs=209.4
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEecCC
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 136 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~~~ 136 (491)
.|++++.||+|+||+||+|+. .+|+.||||++........+.+.+|+.+|++++|||||++++++.+++..+|||||++
T Consensus 27 ~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~ 106 (350)
T d1koaa2 27 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS 106 (350)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCC
Confidence 578888999999999999995 5689999999976554456678999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeC--CCCCeEEccCCCcccCCCCC---c
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD--EDGNPRLSTFGLMKNSRDGK---S 211 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~--~~~~~kl~Dfgla~~~~~~~---~ 211 (491)
||+|.+++.. ..+.+++..+..|+.||+.||.|||+++ ||||||||+|||++ .++.+||+|||+++...... .
T Consensus 107 gg~L~~~l~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~-iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~ 184 (350)
T d1koaa2 107 GGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV 184 (350)
T ss_dssp SCBHHHHHTC-TTSCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEEE
T ss_pred CCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhcC-CeeeeechhHeeeccCCCCeEEEeecchheecccccccce
Confidence 9999999864 3457999999999999999999999999 99999999999996 46889999999998765433 4
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
..||+.|||||++.+..++.++|||||||++|+|++|+.||.+............... .........+++++.+||.+
T Consensus 185 ~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li~~ 262 (350)
T d1koaa2 185 TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDW--NMDDSAFSGISEDGKDFIRK 262 (350)
T ss_dssp ECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CSCCGGGGGCCHHHHHHHHH
T ss_pred ecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCcccccCCCHHHHHHHHH
Confidence 5789999999999999999999999999999999999999876544332222111111 11112234567899999999
Q ss_pred hccCCCCCCCChhHHHHH
Q 011184 292 CLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 292 cl~~dp~~Rps~~~il~~ 309 (491)
||+.||.+|||++++++.
T Consensus 263 ~L~~dP~~R~t~~eil~h 280 (350)
T d1koaa2 263 LLLADPNTRMTIHQALEH 280 (350)
T ss_dssp HCCSSGGGSCCHHHHHHS
T ss_pred HccCChhHCcCHHHHhcC
Confidence 999999999999999983
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-52 Score=403.26 Aligned_cols=250 Identities=21% Similarity=0.283 Sum_probs=203.7
Q ss_pred ccccccccCCCCCccEEEEEEECC-C-----CEEEEEEeCCCC-CCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCee
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLEN-Q-----RRIAVKRFNRMA-WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDER 128 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~ 128 (491)
+.+++++.||+|+||+||+|+... + ..||||.+.... ......+.+|+.++.++ +|||||+++++|...+..
T Consensus 37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~ 116 (325)
T d1rjba_ 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI 116 (325)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeE
Confidence 457788899999999999999532 2 269999986543 23456799999999998 899999999999999999
Q ss_pred EEEEecCCCCCHHHHhcccC---------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccce
Q 011184 129 LLVAEYMPNETLAKHLFHWE---------------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 187 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~---------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Ni 187 (491)
++||||++||+|.+++.... ...+++..++.++.||+.||.|||+++ ||||||||+||
T Consensus 117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~-IiHRDlKp~Ni 195 (325)
T d1rjba_ 117 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAARNV 195 (325)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGGE
T ss_pred EEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCchhcc
Confidence 99999999999999997532 135889999999999999999999998 99999999999
Q ss_pred eeCCCCCeEEccCCCcccCCCCC------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHh
Q 011184 188 LFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLI 260 (491)
Q Consensus 188 ll~~~~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~ 260 (491)
|++.++.+||+|||+|+...... ...||+.|||||++.+..++.++|||||||++|||+| |..||.+......
T Consensus 196 ll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~ 275 (325)
T d1rjba_ 196 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN 275 (325)
T ss_dssp EEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred ccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999999999999997643322 3356899999999999999999999999999999998 7888865432211
Q ss_pred hhccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhc
Q 011184 261 RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 311 (491)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~ 311 (491)
.. .+.........+..+++++.+||.+||+.||++|||+++|++.|.
T Consensus 276 ~~----~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 276 FY----KLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp HH----HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HH----HHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence 11 111111223345567789999999999999999999999999884
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-52 Score=390.46 Aligned_cols=250 Identities=25% Similarity=0.358 Sum_probs=202.4
Q ss_pred CccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecC-CeeEEEEec
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG-DERLLVAEY 134 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~-~~~~lv~e~ 134 (491)
..++++++.||+|+||.||+|.+ .|..||||+++... ..+.|.+|++++++++||||++++|+|.++ +.+++||||
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey 82 (262)
T d1byga_ 6 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 82 (262)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred HHHeEEeEEEecCCCeEEEEEEE-CCeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEec
Confidence 34567888899999999999998 47899999997543 467899999999999999999999998654 568999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-Cccc
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYS 213 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~~~ 213 (491)
+++|+|.+++.......+++..+++|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 83 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~-ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~ 161 (262)
T d1byga_ 83 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 161 (262)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred cCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCc-eeccccchHhheecCCCCEeecccccceecCCCCcccc
Confidence 99999999997543446899999999999999999999998 999999999999999999999999999875433 3456
Q ss_pred cCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHHh
Q 011184 214 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 292 (491)
Q Consensus 214 ~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 292 (491)
+|+.|+|||++.+..++.++||||||+++|||+| |+.|+.......+...... .....++..+++++.+|+.+|
T Consensus 162 ~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~~~~li~~c 236 (262)
T d1byga_ 162 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-----GYKMDAPDGCPPAVYEVMKNC 236 (262)
T ss_dssp CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTT-----TCCCCCCTTCCHHHHHHHHHH
T ss_pred ccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc-----CCCCCCCccCCHHHHHHHHHH
Confidence 7889999999999999999999999999999998 5655554333222222111 122345566778999999999
Q ss_pred ccCCCCCCCChhHHHHHhcccc
Q 011184 293 LQYEPRERPNPKSLVTALSPLQ 314 (491)
Q Consensus 293 l~~dp~~Rps~~~il~~L~~~~ 314 (491)
|+.||.+|||+.++++.|+.+.
T Consensus 237 l~~dP~~Rps~~~l~~~L~~i~ 258 (262)
T d1byga_ 237 WHLDAAMRPSFLQLREQLEHIK 258 (262)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccCHhHCcCHHHHHHHHHHHH
Confidence 9999999999999999998774
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.6e-52 Score=398.57 Aligned_cols=244 Identities=20% Similarity=0.246 Sum_probs=210.8
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCC---CCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
.++|++++.||+|+||+||+|+. .+|+.||||++++. .....+.+.+|+.+|++++||||+++++++.+++.+|+|
T Consensus 4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv 83 (337)
T d1o6la_ 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence 45688889999999999999995 57999999999642 233467799999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC--
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 209 (491)
|||++||+|.+++.. .+.+++..++.++.||+.||+|||+++ ||||||||+|||++.+|.+||+|||+|+.....
T Consensus 84 ~ey~~gg~L~~~~~~--~~~~~e~~~~~~~~qil~al~ylH~~~-iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~ 160 (337)
T d1o6la_ 84 MEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp EECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred eeccCCCchhhhhhc--ccCCcHHHHHHHHHHHhhhhhhhhhcC-ccccccCHHHeEecCCCCEEEeecccccccccCCc
Confidence 999999999999874 457899999999999999999999999 999999999999999999999999999864332
Q ss_pred --CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHH
Q 011184 210 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 287 (491)
Q Consensus 210 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (491)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.....+....... ...+|..+++++.+
T Consensus 161 ~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~d 234 (337)
T d1o6la_ 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAKS 234 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHH
T ss_pred ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcC------CCCCCccCCHHHHH
Confidence 3467899999999999999999999999999999999999999876554433322221 12356677889999
Q ss_pred HHHHhccCCCCCCCC-----hhHHHH
Q 011184 288 LASRCLQYEPRERPN-----PKSLVT 308 (491)
Q Consensus 288 li~~cl~~dp~~Rps-----~~~il~ 308 (491)
||.+||++||.+||+ ++++++
T Consensus 235 li~~~L~~dP~~R~~~~~~~~~eil~ 260 (337)
T d1o6la_ 235 LLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp HHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HHHhhccCCchhhcccccccHHHHHc
Confidence 999999999999995 777876
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.5e-52 Score=393.13 Aligned_cols=246 Identities=15% Similarity=0.153 Sum_probs=206.2
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC------ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP------DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
.|++++.||+|+||+||+|.. .+|+.||||+++..... ..+.+.+|+.+|++++|||||+++++|.+++..+|
T Consensus 11 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i 90 (293)
T d1jksa_ 11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL 90 (293)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 478889999999999999995 56899999999643321 24679999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC----CeEEccCCCcccC
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG----NPRLSTFGLMKNS 206 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~----~~kl~Dfgla~~~ 206 (491)
||||++||+|.+++.. .+.+++..++.++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||++...
T Consensus 91 v~E~~~gg~L~~~i~~--~~~l~~~~~~~~~~qi~~al~yLH~~~-ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~ 167 (293)
T d1jksa_ 91 ILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167 (293)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEEcCCCccccchhcc--ccccchhHHHHHHHHHHHHHHhhhhcc-eeecccccceEEEecCCCcccceEecchhhhhhc
Confidence 9999999999999974 357999999999999999999999999 99999999999998776 4999999999875
Q ss_pred CCC---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHH
Q 011184 207 RDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 283 (491)
Q Consensus 207 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (491)
... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+............... ......+...+.
T Consensus 168 ~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~ 245 (293)
T d1jksa_ 168 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY--EFEDEYFSNTSA 245 (293)
T ss_dssp TTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCC--CCCHHHHTTSCH
T ss_pred CCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC--CCCchhcCCCCH
Confidence 433 345689999999999998999999999999999999999999876544333222111110 001111234567
Q ss_pred HHHHHHHHhccCCCCCCCChhHHHH
Q 011184 284 ELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 284 ~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
++.+||.+||+.||.+|||++++++
T Consensus 246 ~~~~li~~~L~~dP~~R~s~~eil~ 270 (293)
T d1jksa_ 246 LAKDFIRRLLVKDPKKRMTIQDSLQ 270 (293)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHccCChhHCcCHHHHhc
Confidence 8999999999999999999999998
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.4e-51 Score=393.58 Aligned_cols=244 Identities=18% Similarity=0.227 Sum_probs=210.5
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCC---CCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~ 132 (491)
++|++++.||+|+||+||+|+. .+|+.||||+++.. .....+.+.+|+.++++++|||||++++++.+++..++||
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm 83 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 83 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence 4678899999999999999995 56999999999642 2334678999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-Cc
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KS 211 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-~~ 211 (491)
||++||+|..++.. ...+++..+..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++..... ..
T Consensus 84 E~~~gg~l~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 160 (316)
T d1fota_ 84 DYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYT 160 (316)
T ss_dssp CCCCSCBHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCC
T ss_pred eecCCccccccccc--cccccccHHHHHHHHHHHhhhhhccCc-EEccccCchheeEcCCCCEEEecCccceEecccccc
Confidence 99999999998873 467889999999999999999999999 999999999999999999999999999876543 45
Q ss_pred cccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHHH
Q 011184 212 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 291 (491)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 291 (491)
..||+.|||||++.+..++.++|||||||++|+|++|+.||............... ...++..+++++.+++.+
T Consensus 161 ~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~~ 234 (316)
T d1fota_ 161 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA------ELRFPPFFNEDVKDLLSR 234 (316)
T ss_dssp CCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHHH
T ss_pred ccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHH
Confidence 67999999999999989999999999999999999999999776544333222221 123455677899999999
Q ss_pred hccCCCCCCC-----ChhHHHHH
Q 011184 292 CLQYEPRERP-----NPKSLVTA 309 (491)
Q Consensus 292 cl~~dp~~Rp-----s~~~il~~ 309 (491)
||..||.+|+ |++++++.
T Consensus 235 ~L~~dp~~R~~~~r~t~~~il~H 257 (316)
T d1fota_ 235 LITRDLSQRLGNLQNGTEDVKNH 257 (316)
T ss_dssp HTCSCTTTCTTSSTTTTHHHHTS
T ss_pred HhhhCHHhccccchhhHHHHHcC
Confidence 9999999996 89999873
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=5.9e-51 Score=381.89 Aligned_cols=248 Identities=17% Similarity=0.160 Sum_probs=208.1
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCC---------hhHHHHHHHHHhccC-CCCcceEEeEeec
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---------PRQFLEEARSVGQLR-NNRLTNLLGCCCE 124 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---------~~~~~~E~~~l~~l~-H~niv~~~~~~~~ 124 (491)
|..|++++.||+|+||+||+|+. .+|+.||||++....... .+.+.+|+.++++++ ||||+++++++.+
T Consensus 2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 81 (277)
T d1phka_ 2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 81 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence 45788999999999999999995 568999999997644322 135889999999997 9999999999999
Q ss_pred CCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcc
Q 011184 125 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 204 (491)
Q Consensus 125 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 204 (491)
++..||||||++||+|.+++.. .+++++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 82 ~~~~~ivmE~~~~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nill~~~~~~kl~DFG~a~ 158 (277)
T d1phka_ 82 NTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLN-IVHRDLKPENILLDDDMNIKLTDFGFSC 158 (277)
T ss_dssp SSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred CcceEEEEEcCCCchHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcC-CcccccccceEEEcCCCCeEEccchhee
Confidence 9999999999999999999974 457999999999999999999999999 9999999999999999999999999998
Q ss_pred cCCCC---CccccCCCCCCcccccC------CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccC
Q 011184 205 NSRDG---KSYSTNLAFTPPEYLRT------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 275 (491)
Q Consensus 205 ~~~~~---~~~~~t~~y~aPE~~~~------~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (491)
..... ....||+.|+|||.+.+ ..++.++||||+||++|+|++|+.||.+.............-. ....
T Consensus 159 ~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~--~~~~ 236 (277)
T d1phka_ 159 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY--QFGS 236 (277)
T ss_dssp ECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CCCT
T ss_pred EccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCC--CCCC
Confidence 75542 34568999999999863 3478899999999999999999999987654433222221111 1122
Q ss_pred CCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 276 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 276 ~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.....+++++.+|+.+||+.||++|||++++++
T Consensus 237 ~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~ 269 (277)
T d1phka_ 237 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 269 (277)
T ss_dssp TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 234467789999999999999999999999977
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-51 Score=384.81 Aligned_cols=251 Identities=20% Similarity=0.265 Sum_probs=199.3
Q ss_pred ccccccccCCCCCccEEEEEEECC----CCEEEEEEeCCCCCCC-hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLEN----QRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
+.+++++.||+|+||+||+|++.. +..||||.++...... .+.|.+|++++++++|||||++++++. .+..++|
T Consensus 7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv 85 (273)
T d1mp8a_ 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 85 (273)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEE
Confidence 467888999999999999998643 3468999986543222 456999999999999999999999986 4678999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC--
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 209 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~-- 209 (491)
|||+++|+|.+++.. ...++++..++.++.||+.||.|||+++ ||||||||+||+++.++.+||+|||+++.....
T Consensus 86 ~E~~~~g~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~-iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~ 163 (273)
T d1mp8a_ 86 MELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 163 (273)
T ss_dssp EECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECC------------
T ss_pred EEeccCCcHHhhhhc-cCCCCCHHHHHHHHHHHHHHhhhhcccC-eeccccchhheeecCCCcEEEccchhheeccCCcc
Confidence 999999999998764 4567999999999999999999999998 999999999999999999999999999865432
Q ss_pred ---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHHHH
Q 011184 210 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 285 (491)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (491)
....||+.|+|||++.+..++.++|||||||++|||+| |.+|+.......+....... .....+..+++++
T Consensus 164 ~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~~ 238 (273)
T d1mp8a_ 164 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG-----ERLPMPPNCPPTL 238 (273)
T ss_dssp -------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT-----CCCCCCTTCCHHH
T ss_pred eeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHH
Confidence 23457889999999999999999999999999999998 77777654333222211111 1223456777899
Q ss_pred HHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 286 VRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
.+||.+||+.||++|||+.+|++.|+.+..
T Consensus 239 ~~li~~cl~~dp~~Rps~~ei~~~L~~i~~ 268 (273)
T d1mp8a_ 239 YSLMTKCWAYDPSRRPRFTELKAQLSTILE 268 (273)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 999999999999999999999999987754
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=7.9e-51 Score=393.74 Aligned_cols=244 Identities=16% Similarity=0.181 Sum_probs=210.4
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCC---CCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEE
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv 131 (491)
++.|++++.||+|+||+||+|.. .+|+.||||++... .....+.+.+|+.+|+.++|||||++++++...+..++|
T Consensus 40 ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v 119 (350)
T d1rdqe_ 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccc
Confidence 45689999999999999999995 56999999998632 223456789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC-CC
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-GK 210 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~-~~ 210 (491)
|||+.||+|..++.. .+.+++..+..++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++.... ..
T Consensus 120 ~e~~~~g~l~~~l~~--~~~l~e~~~~~i~~qi~~aL~yLH~~~-iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~ 196 (350)
T d1rdqe_ 120 MEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196 (350)
T ss_dssp EECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC
T ss_pred cccccccchhhhHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCcCCHHHcccCCCCCEEeeeceeeeecccccc
Confidence 999999999999874 357999999999999999999999999 99999999999999999999999999987654 34
Q ss_pred ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHHH
Q 011184 211 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 290 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 290 (491)
...||+.|||||++.+..++.++|||||||++|||+||+.||.+............. ...++..+++++.+||.
T Consensus 197 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~ 270 (350)
T d1rdqe_ 197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG------KVRFPSHFSSDLKDLLR 270 (350)
T ss_dssp CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTCCHHHHHHHH
T ss_pred cccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcC------CCCCCccCCHHHHHHHH
Confidence 567999999999999999999999999999999999999999776443333222221 11335567789999999
Q ss_pred HhccCCCCCCC-----ChhHHHH
Q 011184 291 RCLQYEPRERP-----NPKSLVT 308 (491)
Q Consensus 291 ~cl~~dp~~Rp-----s~~~il~ 308 (491)
+||+.||.+|+ |++++++
T Consensus 271 ~~L~~dP~kR~~~~r~t~~ell~ 293 (350)
T d1rdqe_ 271 NLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HHSCSCTTTCTTSSTTTTHHHHT
T ss_pred HHhhhCHHhccccccccHHHHHc
Confidence 99999999994 8999987
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=4.2e-51 Score=384.67 Aligned_cols=252 Identities=17% Similarity=0.219 Sum_probs=204.4
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCC---hhHHHHHHHHHhccCCCCcceEEeEeecCC----eeE
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGD----ERL 129 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~H~niv~~~~~~~~~~----~~~ 129 (491)
.|++++.||+|+||+||+|.. .+|+.||||+++.....+ ...+.+|+++++.++||||+++++++...+ ..|
T Consensus 8 rY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~ 87 (277)
T d1o6ya_ 8 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY 87 (277)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred eeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEE
Confidence 478889999999999999995 579999999998655443 346899999999999999999999987654 378
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC-
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD- 208 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~- 208 (491)
|||||++|++|.+++.. .+++++..++.++.||+.||.|||+++ ||||||||+|||++.++..+|+|||.+.....
T Consensus 88 lvmE~~~g~~L~~~~~~--~~~l~~~~~~~i~~qi~~al~~lH~~~-iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~ 164 (277)
T d1o6ya_ 88 IVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIADS 164 (277)
T ss_dssp EEEECCCEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTSCEEECCCTTCEECC--
T ss_pred EEEECCCCCEehhhhcc--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCccccCcccccCccccceeehhhhhhhhccc
Confidence 99999999999998864 457999999999999999999999999 99999999999999999999999998765432
Q ss_pred ------CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhH
Q 011184 209 ------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 282 (491)
Q Consensus 209 ------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (491)
.....||+.|+|||++.+..++.++|||||||++|||+||+.||...............- ..........++
T Consensus 165 ~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~s 242 (277)
T d1o6ya_ 165 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED--PIPPSARHEGLS 242 (277)
T ss_dssp --------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCC--CCCGGGTSSSCC
T ss_pred cccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcC--CCCCchhccCCC
Confidence 234468999999999999899999999999999999999999987654433222211111 111122344567
Q ss_pred HHHHHHHHHhccCCCCCCC-ChhHHHHHhcccc
Q 011184 283 TELVRLASRCLQYEPRERP-NPKSLVTALSPLQ 314 (491)
Q Consensus 283 ~~~~~li~~cl~~dp~~Rp-s~~~il~~L~~~~ 314 (491)
+++.+||.+||+.||.+|| |++++++.|.++.
T Consensus 243 ~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~ 275 (277)
T d1o6ya_ 243 ADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 275 (277)
T ss_dssp HHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence 8999999999999999999 8999999887654
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-51 Score=383.45 Aligned_cols=250 Identities=20% Similarity=0.267 Sum_probs=197.7
Q ss_pred ccccccccCCCCCccEEEEEEECC--C--CEEEEEEeCCCCCCC---hhHHHHHHHHHhccCCCCcceEEeEeecCCeeE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLEN--Q--RRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 129 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~ 129 (491)
.+++++++||+|+||.||+|++.. + ..||||+++...... .+.|.+|+.+|++++||||++++|+|.+ +..+
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~ 86 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK 86 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence 567889999999999999998532 2 368999987543222 4579999999999999999999999976 4678
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 209 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~ 209 (491)
+||||+++|+|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 87 lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~-iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~ 164 (273)
T d1u46a_ 87 MVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 164 (273)
T ss_dssp EEEECCTTCBHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred eeeeeecCcchhhhhhc-ccCCCCHHHHHHHHHHHHHHHHHhhhCC-EeeeeecHHHhccccccceeeccchhhhhcccC
Confidence 99999999999998765 3457999999999999999999999999 999999999999999999999999999875433
Q ss_pred C-------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchh
Q 011184 210 K-------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 281 (491)
Q Consensus 210 ~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (491)
. ...++..|+|||++.+..++.++|||||||++|||+| |+.||.+............ .......+..+
T Consensus 165 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~----~~~~~~~~~~~ 240 (273)
T d1u46a_ 165 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK----EGERLPRPEDC 240 (273)
T ss_dssp CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT----SCCCCCCCTTC
T ss_pred CCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHh----CCCCCCCcccc
Confidence 2 2346788999999999999999999999999999998 8888876544433222211 11222345567
Q ss_pred HHHHHHHHHHhccCCCCCCCChhHHHHHhccc
Q 011184 282 GTELVRLASRCLQYEPRERPNPKSLVTALSPL 313 (491)
Q Consensus 282 ~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~ 313 (491)
+.++.+|+.+||+.||++|||+.+|++.|...
T Consensus 241 ~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~ 272 (273)
T d1u46a_ 241 PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272 (273)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 78999999999999999999999999988654
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.4e-51 Score=389.69 Aligned_cols=252 Identities=17% Similarity=0.247 Sum_probs=203.8
Q ss_pred ccccccccCCCCCccEEEEEEEC-CCC----EEEEEEeCCCC-CCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE-NQR----RIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
.+|++++.||+|+||+||+|.+. +|+ .||||+++... ....+.|.+|+.++++++|||||+++|+|.++ ..++
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~ 87 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 87 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence 35788889999999999999954 444 58999986543 33467899999999999999999999999875 5678
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 209 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~- 209 (491)
++||+.+|+|.+++.. ....+++..++.++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++.....
T Consensus 88 v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~-iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~ 165 (317)
T d1xkka_ 88 ITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 165 (317)
T ss_dssp EEECCTTCBHHHHHHH-TSSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTC
T ss_pred EEEeccCCcccccccc-cccCCCHHHHHHHHHHHHHHHHHHHHcC-cccCcchhhcceeCCCCCeEeeccccceeccccc
Confidence 8999999999998865 4567999999999999999999999998 999999999999999999999999998865332
Q ss_pred -----CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccccccccccccCCCCchhHH
Q 011184 210 -----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 283 (491)
Q Consensus 210 -----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (491)
....||+.|+|||++.++.++.++|||||||++|||+| |..|+.......+..... .......+..+++
T Consensus 166 ~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~-----~~~~~~~p~~~~~ 240 (317)
T d1xkka_ 166 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-----KGERLPQPPICTI 240 (317)
T ss_dssp C--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHH-----HTCCCCCCTTBCH
T ss_pred ccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHH-----cCCCCCCCcccCH
Confidence 22357899999999999999999999999999999999 666665443322221111 1112234556778
Q ss_pred HHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 284 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 284 ~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
++.+|+.+||+.||.+|||+.+|+..|..+...
T Consensus 241 ~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~~ 273 (317)
T d1xkka_ 241 DVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 273 (317)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhCCCChhhCcCHHHHHHHHHHHHhC
Confidence 999999999999999999999999998877543
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.2e-50 Score=385.79 Aligned_cols=251 Identities=23% Similarity=0.299 Sum_probs=206.7
Q ss_pred cccccccCCCCCccEEEEEEEC------CCCEEEEEEeCCCCCCC-hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 130 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~l 130 (491)
.++++++||+|+||+||+|++. +++.||||+++...... .++|.+|+++|++++||||++++++|...+..++
T Consensus 14 ~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~ 93 (301)
T d1lufa_ 14 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCL 93 (301)
T ss_dssp GCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEE
T ss_pred HcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceEE
Confidence 4678888999999999999853 35789999997544322 4579999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHhcccC----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccccccee
Q 011184 131 VAEYMPNETLAKHLFHWE----------------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRIL 188 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nil 188 (491)
||||+++|+|.+++.... ...+++..++.|+.||+.||+|||+++ +|||||||+|||
T Consensus 94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~-ivHrDlKp~NIL 172 (301)
T d1lufa_ 94 LFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-FVHRDLATRNCL 172 (301)
T ss_dssp EEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEE
T ss_pred EEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCC-eEeeEEcccceE
Confidence 999999999999986321 234789999999999999999999998 999999999999
Q ss_pred eCCCCCeEEccCCCcccCCC------CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCC-CCCCchhhHhh
Q 011184 189 FDEDGNPRLSTFGLMKNSRD------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH-IPPSHALDLIR 261 (491)
Q Consensus 189 l~~~~~~kl~Dfgla~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~-~~~~~~~~~~~ 261 (491)
++.++.+||+|||+++.... .....+|+.|+|||.+.+..++.++|||||||++|||++|.. |+.......+.
T Consensus 173 ld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~ 252 (301)
T d1lufa_ 173 VGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVI 252 (301)
T ss_dssp ECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH
T ss_pred ECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHHHH
Confidence 99999999999999874322 123457889999999999999999999999999999999974 45444333222
Q ss_pred hccccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccc
Q 011184 262 DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 314 (491)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~ 314 (491)
..... . .....+..+++++.+|+.+||+.||++|||+.+|++.|+.+.
T Consensus 253 ~~v~~----~-~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~ 300 (301)
T d1lufa_ 253 YYVRD----G-NILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC 300 (301)
T ss_dssp HHHHT----T-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred HHHHc----C-CCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 22111 1 122345567789999999999999999999999999998764
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7e-51 Score=389.94 Aligned_cols=248 Identities=15% Similarity=0.192 Sum_probs=207.4
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
|..|+++++||+|+||+||+|.. .+|+.||||+++... .+...+.+|+++|++++|||||++++++.+++.+||||||
T Consensus 4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~ 82 (321)
T d1tkia_ 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence 67789999999999999999995 468899999997643 2345688999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC--CCCeEEccCCCcccCCCCC--
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE--DGNPRLSTFGLMKNSRDGK-- 210 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~--~~~~kl~Dfgla~~~~~~~-- 210 (491)
|+||+|.+++.. ....+++..+..|+.||+.||.|||+++ |+||||||+|||++. .+.+||+|||+++......
T Consensus 83 ~~gg~L~~~i~~-~~~~l~e~~~~~i~~qi~~al~yLH~~~-iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~ 160 (321)
T d1tkia_ 83 ISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHN-IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF 160 (321)
T ss_dssp CCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred CCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCcccccccceeecCCCceEEEEcccchhhccccCCcc
Confidence 999999999964 2347999999999999999999999999 999999999999984 4589999999998765432
Q ss_pred -ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHHH
Q 011184 211 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 289 (491)
Q Consensus 211 -~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 289 (491)
...+|+.|+|||.+.+..++.++|||||||++|+|++|..||.................. .....+..+++++.+|+
T Consensus 161 ~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~li 238 (321)
T d1tkia_ 161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYT--FDEEAFKEISIEAMDFV 238 (321)
T ss_dssp EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC--CCHHHHTTSCHHHHHHH
T ss_pred cccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CChhhccCCCHHHHHHH
Confidence 346789999999999889999999999999999999999999776544332222111110 00011124567899999
Q ss_pred HHhccCCCCCCCChhHHHH
Q 011184 290 SRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~ 308 (491)
.+||..||++|||+.++++
T Consensus 239 ~~~L~~dp~~R~s~~eil~ 257 (321)
T d1tkia_ 239 DRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HTTSCSSGGGSCCHHHHHH
T ss_pred HHHccCChhHCcCHHHHhc
Confidence 9999999999999999997
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-50 Score=386.01 Aligned_cols=251 Identities=20% Similarity=0.215 Sum_probs=197.0
Q ss_pred ccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCC-----hhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 61 IVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD-----PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
.++.||+|+||+||+|+. .+|+.||||+++...... .+.+.+|+.+|++++|||||++++++..++..+|||||
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~ 81 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF 81 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence 456789999999999994 569999999996543221 34689999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----C
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 210 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~----~ 210 (491)
+.++++..+.. ....+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 82 ~~~~~~~~~~~--~~~~l~~~~~~~~~~qil~aL~~lH~~~-iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~ 158 (299)
T d1ua2a_ 82 METDLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYT 158 (299)
T ss_dssp CSEEHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCC
T ss_pred hcchHHhhhhh--cccCCCHHHHHHHHHHHHHHHHHhhccc-eecccCCcceEEecCCCccccccCccccccCCCccccc
Confidence 99887776654 3567899999999999999999999999 999999999999999999999999999765432 3
Q ss_pred ccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccccc--------ccc------cccC
Q 011184 211 SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML--------TDS------CLEG 275 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~--------~~~------~~~~ 275 (491)
...||+.|+|||++.+. .++.++|||||||++|||++|..||.+.............+ .+. ....
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (299)
T d1ua2a_ 159 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK 238 (299)
T ss_dssp CSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCC
T ss_pred ceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhc
Confidence 45689999999998755 57999999999999999999998887654322111111000 000 0000
Q ss_pred --------CCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 276 --------QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 276 --------~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
......++++.+|+.+||+.||++|||++|+++ .++...
T Consensus 239 ~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~--Hp~f~~ 285 (299)
T d1ua2a_ 239 SFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK--MKYFSN 285 (299)
T ss_dssp CCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT--SGGGTS
T ss_pred cCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC--CHhhCC
Confidence 011245678999999999999999999999987 344443
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-50 Score=385.58 Aligned_cols=258 Identities=22% Similarity=0.282 Sum_probs=209.4
Q ss_pred CCccccccccCCCCCccEEEEEEEC-CCC--EEEEEEeCCCC-CCChhHHHHHHHHHhcc-CCCCcceEEeEeecCCeeE
Q 011184 55 GFAVENIVSEHGEKAPNVVYKGKLE-NQR--RIAVKRFNRMA-WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERL 129 (491)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~~ 129 (491)
+|+++++.++||+|+||+||+|++. +|. .||||+++... ....+.|.+|+++|+++ +|||||+++++|.+.+..+
T Consensus 8 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~ 87 (309)
T d1fvra_ 8 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 87 (309)
T ss_dssp CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred CHHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeE
Confidence 3556777888999999999999954 444 47888886433 33456799999999999 7999999999999999999
Q ss_pred EEEecCCCCCHHHHhccc--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCe
Q 011184 130 LVAEYMPNETLAKHLFHW--------------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP 195 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~ 195 (491)
+||||++||+|.+++... ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+
T Consensus 88 iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~-iiHrDlkp~NIL~~~~~~~ 166 (309)
T d1fvra_ 88 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVA 166 (309)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCE
T ss_pred EEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCC-ccccccccceEEEcCCCce
Confidence 999999999999999642 2357899999999999999999999998 9999999999999999999
Q ss_pred EEccCCCcccCCCC---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCC-CCCchhhHhhhccccccccc
Q 011184 196 RLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI-PPSHALDLIRDRNLQMLTDS 271 (491)
Q Consensus 196 kl~Dfgla~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~-~~~~~~~~~~~~~~~~~~~~ 271 (491)
||+|||+++..... ....||..|+|||.+.+..++.++|||||||++|||++|..| +.......+......
T Consensus 167 kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~----- 241 (309)
T d1fvra_ 167 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ----- 241 (309)
T ss_dssp EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGG-----
T ss_pred EEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHh-----
Confidence 99999998765432 344688999999999999999999999999999999998754 444333332222111
Q ss_pred cccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccCC
Q 011184 272 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 318 (491)
Q Consensus 272 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~~ 318 (491)
......+..+++++.+||.+||+.||++|||+++|++.|+.+.....
T Consensus 242 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~~ 288 (309)
T d1fvra_ 242 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 288 (309)
T ss_dssp TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred cCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCc
Confidence 11234456678899999999999999999999999999999876543
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-50 Score=389.06 Aligned_cols=247 Identities=15% Similarity=0.140 Sum_probs=199.2
Q ss_pred cccccccc-CCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhcc-CCCCcceEEeEeec----CCeeE
Q 011184 57 AVENIVSE-HGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCE----GDERL 129 (491)
Q Consensus 57 ~~~~~i~~-lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~~~~~~~~----~~~~~ 129 (491)
..|+++++ ||+|+||+||+|+. .+++.||||+++. ...+.+|++++.++ +|||||+++++|.+ ...+|
T Consensus 11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ 85 (335)
T d2ozaa1 11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 85 (335)
T ss_dssp GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEE
Confidence 35677765 89999999999995 5789999999853 45788999987665 89999999999865 46689
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC---CCCeEEccCCCcccC
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNS 206 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~---~~~~kl~Dfgla~~~ 206 (491)
||||||+||+|.+++.......+++..+..|+.||+.||.|||+.+ |+||||||+|||++. .+.+||+|||+++..
T Consensus 86 ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~-iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~ 164 (335)
T d2ozaa1 86 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 164 (335)
T ss_dssp EEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred EEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcC-Cccccccccccccccccccccccccccceeeec
Confidence 9999999999999997644567999999999999999999999999 999999999999975 567999999999865
Q ss_pred CCC---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccccccccc--ccCCCCchh
Q 011184 207 RDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC--LEGQFTDDD 281 (491)
Q Consensus 207 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 281 (491)
... ....||+.|+|||++.+..++.++|||||||++|+|+||+.||.+.............+.... .+......+
T Consensus 165 ~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 244 (335)
T d2ozaa1 165 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 244 (335)
T ss_dssp CCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHS
T ss_pred cCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccC
Confidence 432 355789999999999988999999999999999999999999865432221111111111111 111112346
Q ss_pred HHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 282 GTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 282 ~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
++++.+||.+||+.||++|||+.++++.
T Consensus 245 s~~~~~li~~~L~~dP~~R~s~~eil~h 272 (335)
T d2ozaa1 245 SEEVKMLIRNLLKTEPTQRMTITEFMNH 272 (335)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 7899999999999999999999999873
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-50 Score=386.37 Aligned_cols=243 Identities=19% Similarity=0.247 Sum_probs=206.0
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCC---CCCChhHHHHHHHHHh-ccCCCCcceEEeEeecCCeeEEE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVG-QLRNNRLTNLLGCCCEGDERLLV 131 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~-~l~H~niv~~~~~~~~~~~~~lv 131 (491)
++|++++.||+|+||+||+|+. .+|+.||||++++. .....+.+..|..++. .++|||||++++++.+++..|||
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence 4578888999999999999995 46999999999642 1234566778888776 57999999999999999999999
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC---
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--- 208 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--- 208 (491)
|||++||+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||+++++.+||+|||+++....
T Consensus 82 mEy~~~g~L~~~i~~--~~~~~e~~~~~~~~qi~~al~ylH~~~-iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~ 158 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA 158 (320)
T ss_dssp EECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred EeecCCCcHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCcccceeecCCCceeccccchhhhcccccc
Confidence 999999999999974 457899999999999999999999999 99999999999999999999999999985432
Q ss_pred -CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHH
Q 011184 209 -GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 287 (491)
Q Consensus 209 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (491)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.....+....... ...++..+++++.+
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~------~~~~p~~~s~~~~d 232 (320)
T d1xjda_ 159 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD------NPFYPRWLEKEAKD 232 (320)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHH
T ss_pred cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCccCCHHHHH
Confidence 23457899999999999999999999999999999999999999876544433322211 12345567789999
Q ss_pred HHHHhccCCCCCCCChh-HHHH
Q 011184 288 LASRCLQYEPRERPNPK-SLVT 308 (491)
Q Consensus 288 li~~cl~~dp~~Rps~~-~il~ 308 (491)
||.+||+.||.+|||+. ++++
T Consensus 233 li~~~L~~dP~~R~s~~~~l~~ 254 (320)
T d1xjda_ 233 LLVKLFVREPEKRLGVRGDIRQ 254 (320)
T ss_dssp HHHHHSCSSGGGSBTTBSCGGG
T ss_pred HHHHhcccCCCCCcCHHHHHHh
Confidence 99999999999999996 6765
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=3.4e-50 Score=391.38 Aligned_cols=247 Identities=19% Similarity=0.184 Sum_probs=200.9
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC---CCChhHHHHH---HHHHhccCCCCcceEEeEeecCCee
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEE---ARSVGQLRNNRLTNLLGCCCEGDER 128 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E---~~~l~~l~H~niv~~~~~~~~~~~~ 128 (491)
.++|++++.||+|+||+||+|+. .+|+.||||++.... ......+.+| +.+++.++|||||++++++..++..
T Consensus 3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~ 82 (364)
T d1omwa3 3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 82 (364)
T ss_dssp STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence 35678888999999999999995 469999999985321 1223334444 6677777899999999999999999
Q ss_pred EEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC
Q 011184 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 208 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 208 (491)
|+||||++||+|.+++.. ...+++..++.++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++....
T Consensus 83 ~ivmE~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~aL~ylH~~~-iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~ 159 (364)
T d1omwa3 83 SFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSK 159 (364)
T ss_dssp EEEECCCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECSSSCEEECCCTTCEECSS
T ss_pred EEEEEecCCCcHHHHHHh--cccccHHHHHHHHHHHHHHHHHHHHCC-ccceeeccceeEEcCCCcEEEeeeceeeecCC
Confidence 999999999999999974 457899999999999999999999999 99999999999999999999999999986544
Q ss_pred C--CccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHH
Q 011184 209 G--KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 285 (491)
Q Consensus 209 ~--~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (491)
. ....||+.|+|||++.. ..++.++|||||||++|||+||+.||............ .... .....++..+++++
T Consensus 160 ~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~-~~~~--~~~~~~~~~~s~~~ 236 (364)
T d1omwa3 160 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID-RMTL--TMAVELPDSFSPEL 236 (364)
T ss_dssp SCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHH-HHSS--SCCCCCCSSSCHHH
T ss_pred CcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHH-Hhcc--cCCCCCCCCCCHHH
Confidence 3 34579999999999975 45899999999999999999999998754322111100 0000 11223455677899
Q ss_pred HHHHHHhccCCCCCCCC-----hhHHHH
Q 011184 286 VRLASRCLQYEPRERPN-----PKSLVT 308 (491)
Q Consensus 286 ~~li~~cl~~dp~~Rps-----~~~il~ 308 (491)
.+||.+||+.||.+||| ++++++
T Consensus 237 ~~li~~~L~~dP~~R~t~~~~~a~eil~ 264 (364)
T d1omwa3 237 RSLLEGLLQRDVNRRLGCLGRGAQEVKE 264 (364)
T ss_dssp HHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred HHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence 99999999999999999 688876
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.8e-50 Score=379.71 Aligned_cols=253 Identities=22% Similarity=0.303 Sum_probs=205.4
Q ss_pred ccccccccCCCCCccEEEEEEECC--------CCEEEEEEeCCCCCC-ChhHHHHHHHHHhcc-CCCCcceEEeEeecCC
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLEN--------QRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGD 126 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~ 126 (491)
+.+++++.||+|+||.||+|+... +..||||+++..... ....+.+|+..+.++ +|||||+++++|.+++
T Consensus 13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~ 92 (299)
T d1fgka_ 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 92 (299)
T ss_dssp GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCC
Confidence 568888999999999999998422 247999999765432 246788999999998 7999999999999999
Q ss_pred eeEEEEecCCCCCHHHHhcccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCC
Q 011184 127 ERLLVAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 192 (491)
Q Consensus 127 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~ 192 (491)
..++||||+++|+|.+++.... ...+++..++.++.||+.||+|||+.+ ||||||||+|||++.+
T Consensus 93 ~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~-ivHrDiKp~NiLl~~~ 171 (299)
T d1fgka_ 93 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTED 171 (299)
T ss_dssp SCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTT
T ss_pred eEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCC-EEeeeecccceeecCC
Confidence 9999999999999999996432 245899999999999999999999999 9999999999999999
Q ss_pred CCeEEccCCCcccCCC------CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHh-CCCCCCCchhhHhhhccc
Q 011184 193 GNPRLSTFGLMKNSRD------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNL 265 (491)
Q Consensus 193 ~~~kl~Dfgla~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~ellt-g~~~~~~~~~~~~~~~~~ 265 (491)
+.+||+|||+++.... .....+|+.|+|||.+.++.++.++|||||||++|||++ |..|+.......+...
T Consensus 172 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~-- 249 (299)
T d1fgka_ 172 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL-- 249 (299)
T ss_dssp CCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH--
T ss_pred CCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHH--
Confidence 9999999999875432 223467889999999999999999999999999999998 5666655444332221
Q ss_pred cccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 266 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
.........+..+++++.+||.+||+.||.+|||+.+|++.|+.+..
T Consensus 250 ---i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a 296 (299)
T d1fgka_ 250 ---LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 296 (299)
T ss_dssp ---HHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---HHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence 11122334456677899999999999999999999999999987753
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-50 Score=383.85 Aligned_cols=255 Identities=22% Similarity=0.265 Sum_probs=196.6
Q ss_pred CccccccccCCCCCccEEEEEEEC------CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhcc-CCCCcceEEeEeecC-C
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEG-D 126 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~-~ 126 (491)
.+.+++++.||+|+||.||+|... +++.||||+++..... ..+.+.+|..++.++ +|+||+.+++++..+ +
T Consensus 12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~ 91 (299)
T d1ywna1 12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 91 (299)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC
Confidence 356888899999999999999953 2468999999754322 245688888888887 689999999998765 4
Q ss_pred eeEEEEecCCCCCHHHHhcccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCC
Q 011184 127 ERLLVAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 192 (491)
Q Consensus 127 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~ 192 (491)
..++||||+++|+|.+++.... ...+++..+..++.||+.||.|||+++ ||||||||+||||+++
T Consensus 92 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~-ivHrDlKp~NILl~~~ 170 (299)
T d1ywna1 92 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEK 170 (299)
T ss_dssp CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECGG
T ss_pred eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCC-CcCCcCCccceeECCC
Confidence 6899999999999999996421 235889999999999999999999998 9999999999999999
Q ss_pred CCeEEccCCCcccCCCC------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCC-CCCCchhhHhhhccc
Q 011184 193 GNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH-IPPSHALDLIRDRNL 265 (491)
Q Consensus 193 ~~~kl~Dfgla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~-~~~~~~~~~~~~~~~ 265 (491)
+.+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||+||.. |+...........
T Consensus 171 ~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~-- 248 (299)
T d1ywna1 171 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR-- 248 (299)
T ss_dssp GCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHH--
T ss_pred CcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHH--
Confidence 99999999999754322 23468999999999999999999999999999999999865 4543321111000
Q ss_pred cccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 266 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
..........+..+++++.+|+.+||+.||++|||++++++.|+.+.+
T Consensus 249 --~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq 296 (299)
T d1ywna1 249 --RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 296 (299)
T ss_dssp --HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --HHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 111111223455677899999999999999999999999999987754
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-49 Score=378.40 Aligned_cols=248 Identities=24% Similarity=0.319 Sum_probs=200.7
Q ss_pred ccCCCCCccEEEEEEECCC----CEEEEEEeCCCCC-CChhHHHHHHHHHhccCCCCcceEEeEeec-CCeeEEEEecCC
Q 011184 63 SEHGEKAPNVVYKGKLENQ----RRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCE-GDERLLVAEYMP 136 (491)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~~~----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~~~~~~~~-~~~~~lv~e~~~ 136 (491)
..||+|+||+||+|++.++ ..||||+++.... ...+.|.+|+++|++++||||++++|++.. ++..++||||++
T Consensus 33 ~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~ 112 (311)
T d1r0pa_ 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 112 (311)
T ss_dssp EEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCT
T ss_pred eEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEee
Confidence 3579999999999996432 2589999975332 234679999999999999999999999875 468899999999
Q ss_pred CCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC-------
Q 011184 137 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------- 209 (491)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~------- 209 (491)
+|+|.+++.. ....+++..+++++.|++.||.|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 113 ~g~l~~~~~~-~~~~~~~~~~~~i~~qia~gL~~lH~~~-iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~ 190 (311)
T d1r0pa_ 113 HGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN 190 (311)
T ss_dssp TCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTC
T ss_pred cCchhhhhcc-ccccchHHHHHHHHHHHHHhhhhhcccC-cccCCccHHhEeECCCCCEEEecccchhhcccccccccee
Confidence 9999998865 3456788899999999999999999998 999999999999999999999999999864332
Q ss_pred -CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHHHHHHH
Q 011184 210 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 288 (491)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 288 (491)
....||+.|+|||.+.+..++.++||||||+++|||+||+.||....... .....+... .....+..+++++.+|
T Consensus 191 ~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~---~~~~~i~~g-~~~~~p~~~~~~l~~l 266 (311)
T d1r0pa_ 191 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF---DITVYLLQG-RRLLQPEYCPDPLYEV 266 (311)
T ss_dssp TTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC---------CHHHHHTT-CCCCCCTTCCHHHHHH
T ss_pred cccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHH---HHHHHHHcC-CCCCCcccCcHHHHHH
Confidence 22457889999999999999999999999999999999887775432111 000111111 1223345567899999
Q ss_pred HHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 289 ASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
|.+||+.||++|||+.+|++.|+.+...
T Consensus 267 i~~cl~~dP~~RPs~~ei~~~L~~i~~~ 294 (311)
T d1r0pa_ 267 MLKCWHPKAEMRPSFSELVSRISAIFST 294 (311)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999988764
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-49 Score=374.45 Aligned_cols=251 Identities=20% Similarity=0.262 Sum_probs=198.8
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCC--CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
+.|++++.||+|+||+||+|+. .+|+.||||+++.... ....++.+|+++|++++|||||++++++.+++..++|||
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e 81 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 81 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence 4577888999999999999995 5699999999965432 235689999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----C
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----G 209 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~ 209 (491)
|+.+ ++.+++.......+++..+..++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+++.... .
T Consensus 82 ~~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~-IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~ 159 (298)
T d1gz8a_ 82 FLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159 (298)
T ss_dssp CCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCT
T ss_pred ecCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCC-EEccccCchheeecccCcceeccCCcceeccCCcccc
Confidence 9975 5555554435667999999999999999999999999 99999999999999999999999999876433 2
Q ss_pred CccccCCCCCCcccccCCC-CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccc-----------cccc-ccccCC
Q 011184 210 KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-----------MLTD-SCLEGQ 276 (491)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~-----------~~~~-~~~~~~ 276 (491)
....||+.|+|||.+.... ++.++|||||||++|+|++|+.||.+............ .... ......
T Consensus 160 ~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 239 (298)
T d1gz8a_ 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239 (298)
T ss_dssp TCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred eeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccc
Confidence 3447899999999887665 57899999999999999999999876532211111000 0000 000000
Q ss_pred -----------CCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 277 -----------FTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 277 -----------~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
....++.++.+|+.+||+.||++|||++++++.
T Consensus 240 ~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H 283 (298)
T d1gz8a_ 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 283 (298)
T ss_dssp SCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 012345789999999999999999999999983
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-49 Score=379.64 Aligned_cols=254 Identities=20% Similarity=0.295 Sum_probs=207.1
Q ss_pred ccccccccCCCCCccEEEEEEE------CCCCEEEEEEeCCCCCC-ChhHHHHHHHHHhcc-CCCCcceEEeEeecCCee
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDER 128 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~H~niv~~~~~~~~~~~~ 128 (491)
..+++.+.||+|+||.||+|++ .+++.||||+++..... ....|.+|+.+++++ +|||||+++++|..++..
T Consensus 23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~ 102 (311)
T d1t46a_ 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (311)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEE
Confidence 3567788899999999999985 23578999999765432 245689999999999 699999999999999999
Q ss_pred EEEEecCCCCCHHHHhcccC----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCC
Q 011184 129 LLVAEYMPNETLAKHLFHWE----------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 192 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~----------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~ 192 (491)
++||||+++|+|.+++.... ...+++..+..++.||+.||.|||+++ +|||||||+|||++.+
T Consensus 103 ~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~-ivHrDLKp~NIl~~~~ 181 (311)
T d1t46a_ 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHG 181 (311)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEETT
T ss_pred EEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccccccccccccc
Confidence 99999999999999986432 235889999999999999999999999 9999999999999999
Q ss_pred CCeEEccCCCcccCCCCC------ccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCC-CCCchhhHhhhccc
Q 011184 193 GNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI-PPSHALDLIRDRNL 265 (491)
Q Consensus 193 ~~~kl~Dfgla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~-~~~~~~~~~~~~~~ 265 (491)
+.+|++|||+++...... ...||+.|+|||.+.++.++.++|||||||++|||+|++.| +........ +
T Consensus 182 ~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~----~ 257 (311)
T d1t46a_ 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK----F 257 (311)
T ss_dssp TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH----H
T ss_pred CcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHH----H
Confidence 999999999998654332 34578999999999999999999999999999999995544 433222111 0
Q ss_pred cccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 266 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
..+.........+...+.++.+||.+||+.||.+|||+.+|++.|+....
T Consensus 258 ~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~ 307 (311)
T d1t46a_ 258 YKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (311)
T ss_dssp HHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhc
Confidence 11111122233445567899999999999999999999999999987644
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.4e-49 Score=374.78 Aligned_cols=253 Identities=21% Similarity=0.310 Sum_probs=207.4
Q ss_pred ccccccccCCCCCccEEEEEEEC------CCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeE
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 129 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~ 129 (491)
+.+++++.||+|+||+||+|.+. ++..||||+++..... ....|.+|++++++++||||++++++|..++..+
T Consensus 20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~ 99 (308)
T d1p4oa_ 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 99 (308)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCcee
Confidence 45678889999999999999863 2578999999754322 2346899999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHhccc--------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCC
Q 011184 130 LVAEYMPNETLAKHLFHW--------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 201 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~--------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfg 201 (491)
+||||+++|+|.+++... ....+++..+.+++.|++.||.|||+++ |+||||||+|||++.++++||+|||
T Consensus 100 lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~-ivHrDlk~~NiLld~~~~~Kl~DFG 178 (308)
T d1p4oa_ 100 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFG 178 (308)
T ss_dssp EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCSGGGEEECTTCCEEECCTT
T ss_pred EEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCC-eeeceEcCCceeecCCceEEEeecc
Confidence 999999999999988632 1235789999999999999999999998 9999999999999999999999999
Q ss_pred CcccCCCC------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCC-CCCCCchhhHhhhcccccccccccc
Q 011184 202 LMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK-HIPPSHALDLIRDRNLQMLTDSCLE 274 (491)
Q Consensus 202 la~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~-~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (491)
+++..... ....+|+.|+|||.+.+..++.++||||||+++|||+||. .|+.......+..... +. ..
T Consensus 179 la~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~----~~-~~ 253 (308)
T d1p4oa_ 179 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM----EG-GL 253 (308)
T ss_dssp CCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH----TT-CC
T ss_pred cceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHH----hC-CC
Confidence 99764332 2335789999999999999999999999999999999996 4454433322222111 11 11
Q ss_pred CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 275 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 275 ~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
...+..+++.+.+||.+||+.||++|||+++|++.|+....
T Consensus 254 ~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~ 294 (308)
T d1p4oa_ 254 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 294 (308)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 23345667899999999999999999999999999977644
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=1.6e-48 Score=369.00 Aligned_cols=249 Identities=17% Similarity=0.237 Sum_probs=201.0
Q ss_pred ccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCC--CChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEec
Q 011184 57 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 134 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e~ 134 (491)
..|+++++||+|+||+||+|+..+|+.||||+++.... ...+.+.+|+.+|++++||||+++++++..++..+++|||
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~ 81 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence 35788999999999999999988899999999965432 2356899999999999999999999999999999999999
Q ss_pred CCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC----CC
Q 011184 135 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GK 210 (491)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~----~~ 210 (491)
+.++.+..+.. ..+.+++..+..++.||+.||+|||+.+ ||||||||+|||++.++.+||+|||++..... ..
T Consensus 82 ~~~~~~~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~-IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 158 (286)
T d1ob3a_ 82 LDQDLKKLLDV--CEGGLESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT 158 (286)
T ss_dssp CSEEHHHHHHT--STTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred ehhhhHHHHHh--hcCCcchhhhHHHHHHHHHHHHHhccCc-EEecCCCCceeeEcCCCCEEecccccceecccCccccc
Confidence 98777666654 3577999999999999999999999998 99999999999999999999999999876433 23
Q ss_pred ccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccc--------------c--------
Q 011184 211 SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--------------M-------- 267 (491)
Q Consensus 211 ~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~--------------~-------- 267 (491)
...+++.|+|||.+.+. .++.++|||||||++|||++|+.||.+............ .
T Consensus 159 ~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T d1ob3a_ 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238 (286)
T ss_dssp ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred eecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhccccc
Confidence 44688999999998764 468999999999999999999999865432211110000 0
Q ss_pred -cccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 268 -LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 268 -~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
..............++++.+|+.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~ 280 (286)
T d1ob3a_ 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (286)
T ss_dssp CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00001111233456789999999999999999999999986
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-49 Score=371.32 Aligned_cols=236 Identities=19% Similarity=0.288 Sum_probs=198.3
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC------ChhHHHHHHHHHhccC--CCCcceEEeEeecCCee
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP------DPRQFLEEARSVGQLR--NNRLTNLLGCCCEGDER 128 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--H~niv~~~~~~~~~~~~ 128 (491)
.|++.+.||+|+||+||+|+. .+|+.||||+++..... ....+.+|+.+|++++ |||||++++++.+++..
T Consensus 5 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~ 84 (273)
T d1xwsa_ 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSF 84 (273)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEE
T ss_pred eEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeE
Confidence 577888889999999999995 56899999999653322 2345779999999996 89999999999999999
Q ss_pred EEEEecCCC-CCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC-CCCeEEccCCCcccC
Q 011184 129 LLVAEYMPN-ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNS 206 (491)
Q Consensus 129 ~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~-~~~~kl~Dfgla~~~ 206 (491)
++||||+.+ +++.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++. ++.+||+|||+++..
T Consensus 85 ~lv~e~~~~~~~l~~~~~~--~~~l~e~~~~~~~~qi~~al~~lH~~~-iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~ 161 (273)
T d1xwsa_ 85 VLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGALL 161 (273)
T ss_dssp EEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEEEEeccCcchHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccccCcccceEEecCCCeEEECccccceec
Confidence 999999976 688888763 457999999999999999999999999 999999999999985 578999999999865
Q ss_pred CCC--CccccCCCCCCcccccCCCC-CCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCchhHH
Q 011184 207 RDG--KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 283 (491)
Q Consensus 207 ~~~--~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (491)
... ....||+.|+|||++.+..+ +.++|||||||++|||++|+.||..... +... ...++..+++
T Consensus 162 ~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~--i~~~----------~~~~~~~~s~ 229 (273)
T d1xwsa_ 162 KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--IIRG----------QVFFRQRVSS 229 (273)
T ss_dssp CSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--HHHC----------CCCCSSCCCH
T ss_pred ccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH--Hhhc----------ccCCCCCCCH
Confidence 433 45679999999999987765 5679999999999999999998865421 1111 1123445678
Q ss_pred HHHHHHHHhccCCCCCCCChhHHHH
Q 011184 284 ELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 284 ~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
++.+||.+||+.||++|||++++++
T Consensus 230 ~~~~li~~~L~~dp~~R~s~~eil~ 254 (273)
T d1xwsa_ 230 ECQHLIRWCLALRPSDRPTFEEIQN 254 (273)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHccCCHhHCcCHHHHhc
Confidence 9999999999999999999999987
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.2e-49 Score=373.76 Aligned_cols=250 Identities=17% Similarity=0.232 Sum_probs=191.8
Q ss_pred ccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHH--HHhccCCCCcceEEeEeecCC----eeEEEE
Q 011184 59 ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR--SVGQLRNNRLTNLLGCCCEGD----ERLLVA 132 (491)
Q Consensus 59 ~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~--~l~~l~H~niv~~~~~~~~~~----~~~lv~ 132 (491)
+-+.++||+|+||+||+|++ +|+.||||+++.. ....+.+|.+ .+.+++||||+++++++...+ ..++||
T Consensus 5 ~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~---~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~ 80 (303)
T d1vjya_ 5 IVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp EEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred EEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc---chhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEE
Confidence 34556789999999999997 5789999999643 2344444544 555789999999999998654 579999
Q ss_pred ecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh--------CCCcccccccccceeeCCCCCeEEccCCCcc
Q 011184 133 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS--------KGRALYHDLNAYRILFDEDGNPRLSTFGLMK 204 (491)
Q Consensus 133 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~--------~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 204 (491)
||+++|+|.+++.. .++++..+++++.|++.||.|||+ ++ ||||||||+||||+.++.+||+|||+++
T Consensus 81 Ey~~~g~L~~~l~~---~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~-IvHrDlKp~NILl~~~~~~Kl~DFGl~~ 156 (303)
T d1vjya_ 81 DYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp ECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-EECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred ecccCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC-eeccccCccceEEcCCCCeEEEecCccc
Confidence 99999999999963 469999999999999999999996 46 9999999999999999999999999987
Q ss_pred cCCCC--------CccccCCCCCCcccccCCC------CCCCccchhHHHHHHHHHhCCCCCCCchh-------------
Q 011184 205 NSRDG--------KSYSTNLAFTPPEYLRTGR------VTPESVIYSFGTLLLDLLSGKHIPPSHAL------------- 257 (491)
Q Consensus 205 ~~~~~--------~~~~~t~~y~aPE~~~~~~------~~~~~Dv~slG~vl~elltg~~~~~~~~~------------- 257 (491)
..... ....||+.|+|||++.+.. ++.++|||||||++|||+||..|+.....
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~ 236 (303)
T d1vjya_ 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp EEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred cccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccc
Confidence 64322 2356899999999987543 56789999999999999999866532110
Q ss_pred --hHhhhccccccccccccCC-CCchhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 258 --DLIRDRNLQMLTDSCLEGQ-FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 258 --~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
.............+..... ........+.+|+.+||+.||.+|||+.+|++.|+.+..+
T Consensus 237 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~ 298 (303)
T d1vjya_ 237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHh
Confidence 0011111111111111111 1223556799999999999999999999999999988754
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-48 Score=370.11 Aligned_cols=251 Identities=20% Similarity=0.222 Sum_probs=198.9
Q ss_pred ccccccccCCCCCccEEEEEEE-CC-CCEEEEEEeCCCC--CCChhHHHHHHHHHhcc---CCCCcceEEeEeec-----
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-EN-QRRIAVKRFNRMA--WPDPRQFLEEARSVGQL---RNNRLTNLLGCCCE----- 124 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~H~niv~~~~~~~~----- 124 (491)
..|+++++||+|+||+||+|+. .+ ++.||||+++... ......+.+|+.+|+.| +||||++++++|..
T Consensus 7 ~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~ 86 (305)
T d1blxa_ 7 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 86 (305)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred CCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccccc
Confidence 4688999999999999999995 44 6679999986432 22344677888888776 79999999999853
Q ss_pred CCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcc
Q 011184 125 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 204 (491)
Q Consensus 125 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 204 (491)
....+++|||+.++++..... .....+++..++.++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+++
T Consensus 87 ~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~qi~~aL~yLH~~~-ivHrDiKp~NILi~~~~~~kl~dfg~~~ 164 (305)
T d1blxa_ 87 ETKLTLVFEHVDQDLTTYLDK-VPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLAR 164 (305)
T ss_dssp EEEEEEEEECCSCBHHHHHHH-SCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred CceEEEEEEeccCCchhhhhh-ccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EEecCCCccEEEEcCCCCeeecchhhhh
Confidence 346899999999776654443 24567899999999999999999999999 9999999999999999999999999987
Q ss_pred cCCCC---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccc--------------
Q 011184 205 NSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM-------------- 267 (491)
Q Consensus 205 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~-------------- 267 (491)
..... ....||+.|+|||++.+..++.++||||+||++|||++|+.||.+.............
T Consensus 165 ~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 244 (305)
T d1blxa_ 165 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 244 (305)
T ss_dssp CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCS
T ss_pred hhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhccccccc
Confidence 65432 3567899999999999999999999999999999999999998765332211111000
Q ss_pred -------cccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 268 -------LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 268 -------~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
.........++...++.+.+|+.+||+.||++|||+.|+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H 293 (305)
T d1blxa_ 245 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 293 (305)
T ss_dssp SCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred chhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 000001112344567889999999999999999999999873
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-46 Score=361.31 Aligned_cols=256 Identities=17% Similarity=0.198 Sum_probs=197.0
Q ss_pred CccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCC--CCChhHHHHHHHHHhccCCCCcceEEeEeec--------
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCE-------- 124 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~-------- 124 (491)
.+.|++++.||+|+||+||+|+. .+|+.||||++.... ......+.+|+++|++++||||+++++++..
T Consensus 9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~ 88 (318)
T d3blha1 9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 88 (318)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence 46788999999999999999995 579999999986433 2235678999999999999999999999855
Q ss_pred CCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcc
Q 011184 125 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 204 (491)
Q Consensus 125 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 204 (491)
.+..++||||+.++++..... ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 89 ~~~~~iv~e~~~~~~~~~~~~--~~~~~~~~~~~~i~~qil~~l~~lH~~~-ivHrDlKp~NILl~~~~~~kl~dfg~~~ 165 (318)
T d3blha1 89 KGSIYLVFDFCEHDLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGLAR 165 (318)
T ss_dssp --CEEEEEECCCEEHHHHHTC--TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred CceEEEEEeccCCCccchhhh--cccccccHHHHHHHHHHHHHHHHhccCC-EEecCcCchheeecCCCcEEeeecceee
Confidence 345799999998777665543 4567899999999999999999999998 9999999999999999999999999987
Q ss_pred cCCC--------CCccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccccccc---cc
Q 011184 205 NSRD--------GKSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD---SC 272 (491)
Q Consensus 205 ~~~~--------~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~---~~ 272 (491)
.... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.+................ ..
T Consensus 166 ~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 245 (318)
T d3blha1 166 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV 245 (318)
T ss_dssp ECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred ecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhh
Confidence 5432 2234689999999998765 5899999999999999999999988654322211111000000 00
Q ss_pred --------c------cCCCCc---------hhHHHHHHHHHHhccCCCCCCCChhHHHHHhcccccc
Q 011184 273 --------L------EGQFTD---------DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 316 (491)
Q Consensus 273 --------~------~~~~~~---------~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~ 316 (491)
. ...... ..++.+.+||.+||+.||++|||++|+++ .++...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~--Hpff~~ 310 (318)
T d3blha1 246 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN--HDFFWS 310 (318)
T ss_dssp STTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHH--SGGGSS
T ss_pred ccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHc--Chhhcc
Confidence 0 000000 12457789999999999999999999998 445543
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.3e-47 Score=366.62 Aligned_cols=246 Identities=18% Similarity=0.244 Sum_probs=193.8
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCC--hhHHHHHHHHHhccCCCCcceEEeEeecCC------ee
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGD------ER 128 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~~~~~~~~~~------~~ 128 (491)
.|++++.||+|+||+||+|+. .+|+.||||+++...... .+.+.+|+++|++++|||||+++++|...+ .+
T Consensus 19 ~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 98 (346)
T d1cm8a_ 19 VYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDF 98 (346)
T ss_dssp SEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCC
T ss_pred cEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceE
Confidence 578889999999999999995 569999999997543322 457889999999999999999999997654 47
Q ss_pred EEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC
Q 011184 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 208 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 208 (491)
++||||+ +.+|...+. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+|++|||+++....
T Consensus 99 ~lv~e~~-~~~l~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~-IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~ 173 (346)
T d1cm8a_ 99 YLVMPFM-GTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQADS 173 (346)
T ss_dssp EEEEECC-SEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EEEEecc-cccHHHHHH---hccccHHHHHHHHHHHHHHHHHHHhCC-CcccccCcchhhcccccccccccccceeccCC
Confidence 9999999 578888774 357999999999999999999999999 99999999999999999999999999987654
Q ss_pred C-CccccCCCCCCcccccCC-CCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcc----------------------
Q 011184 209 G-KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN---------------------- 264 (491)
Q Consensus 209 ~-~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~---------------------- 264 (491)
. ....||+.|+|||++.+. .++.++||||+||++|+|++|+.||.+..........
T Consensus 174 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (346)
T d1cm8a_ 174 EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKN 253 (346)
T ss_dssp SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHH
T ss_pred ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhh
Confidence 3 456789999999998764 4789999999999999999999988654221110000
Q ss_pred ----ccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 265 ----LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 265 ----~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
....... .........++++.+||.+||..||.+|||++++++.
T Consensus 254 ~~~~~~~~~~~-~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~H 301 (346)
T d1cm8a_ 254 YMKGLPELEKK-DFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 301 (346)
T ss_dssp HHHHSCCCCCC-CGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hhccCCccccc-chHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000000 0111234456789999999999999999999999983
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.5e-47 Score=367.10 Aligned_cols=248 Identities=18% Similarity=0.235 Sum_probs=192.3
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC-ChhHHHHHHHHHhccCCCCcceEEeEeecCC----eeEEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGD----ERLLV 131 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~----~~~lv 131 (491)
.|++++.||+|+||+||+|+. .+|+.||||++...... ..+.+.+|+++|++++||||+++++++.... ..+++
T Consensus 9 rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l 88 (345)
T d1pmea_ 9 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYL 88 (345)
T ss_dssp TEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred CeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEE
Confidence 478999999999999999994 57999999999754321 2457889999999999999999999987643 23455
Q ss_pred EecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC---
Q 011184 132 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--- 208 (491)
Q Consensus 132 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~--- 208 (491)
++|+.+|+|.+++. ...+++..++.++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+++....
T Consensus 89 ~~~~~~g~L~~~l~---~~~l~~~~i~~i~~qil~al~yLH~~~-iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~ 164 (345)
T d1pmea_ 89 VTHLMGADLYKLLK---TQHLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 164 (345)
T ss_dssp EEECCCEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCGGGC
T ss_pred EEeecCCchhhhhh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCcceEEECCCCCEEEcccCceeeccCCCc
Confidence 56677999999995 357999999999999999999999999 99999999999999999999999999875432
Q ss_pred ----CCccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccc----------------
Q 011184 209 ----GKSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM---------------- 267 (491)
Q Consensus 209 ----~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~---------------- 267 (491)
.....||+.|+|||++.. ..++.++||||+||++|+|++|+.||...............
T Consensus 165 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (345)
T d1pmea_ 165 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 244 (345)
T ss_dssp BCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHH
T ss_pred cceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhh
Confidence 234468899999999854 45788999999999999999999998654322111110000
Q ss_pred -------cc--cccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHHH
Q 011184 268 -------LT--DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 309 (491)
Q Consensus 268 -------~~--~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~ 309 (491)
.. ............+.++.+|+.+||+.||.+|||++++++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h 295 (345)
T d1pmea_ 245 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 295 (345)
T ss_dssp HHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00 0000001122445789999999999999999999999973
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-46 Score=361.96 Aligned_cols=246 Identities=21% Similarity=0.228 Sum_probs=191.5
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcceEEeEeecC------CeeEE
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG------DERLL 130 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~~~~~~~~~------~~~~l 130 (491)
.|+.++.||+|+||+||+|+. .+|+.||||++.... ....+|+++|++++||||++++++|... .+.+|
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l 96 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----SSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccc----hHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence 356677789999999999995 569999999997543 2334799999999999999999998543 35789
Q ss_pred EEecCCCCCHHHHhcc-cCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC-CeEEccCCCcccCCC
Q 011184 131 VAEYMPNETLAKHLFH-WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRD 208 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~ 208 (491)
||||++++.+...... .....+++..+..++.||+.||+|||+++ |+||||||+|||++.++ .+||+|||+++....
T Consensus 97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~-IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~ 175 (350)
T d1q5ka_ 97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175 (350)
T ss_dssp EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTTCCEEECCCTTCEECCT
T ss_pred EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcC-CcccCCCcceEEEecCCCceeEecccchhhccC
Confidence 9999986544333221 23567999999999999999999999999 99999999999999775 899999999986543
Q ss_pred ---CCccccCCCCCCcccccC-CCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccc-------------------
Q 011184 209 ---GKSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL------------------- 265 (491)
Q Consensus 209 ---~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~------------------- 265 (491)
.....||+.|+|||.+.+ ..++.++||||+||++|||++|+.||.............
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~ 255 (350)
T d1q5ka_ 176 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 255 (350)
T ss_dssp TSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---
T ss_pred CcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchh
Confidence 234578999999998875 468999999999999999999999987553221111100
Q ss_pred ----cccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 266 ----QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 266 ----~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
................++++.+|+.+||+.||++|||+.|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 302 (350)
T d1q5ka_ 256 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302 (350)
T ss_dssp CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0000000111123346788999999999999999999999997
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5e-46 Score=353.26 Aligned_cols=249 Identities=18% Similarity=0.211 Sum_probs=202.0
Q ss_pred ccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecCCeeEEEEe
Q 011184 57 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 133 (491)
Q Consensus 57 ~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~~~~~lv~e 133 (491)
..|+++++||+|+||+||+|+. .+|+.||||+++..... ....+.+|+.+|+.++||||+++++++...+..++|++
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~ 81 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence 3578999999999999999995 57899999999654432 25678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCCC----
Q 011184 134 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 209 (491)
Q Consensus 134 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~~---- 209 (491)
++.+++|..++. ..+.+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||.++.....
T Consensus 82 ~~~~~~l~~~~~--~~~~~~~~~~~~~~~q~~~aL~~lH~~~-IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~ 158 (292)
T d1unla_ 82 FCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSRN-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY 158 (292)
T ss_dssp CCSEEHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCC
T ss_pred eccccccccccc--cccccchhHHHHHHHHHHHHHHHhhcCC-EeeecccCcccccccCCceeeeecchhhcccCCCccc
Confidence 999999988776 4567899999999999999999999999 999999999999999999999999999865433
Q ss_pred CccccCCCCCCcccccCCC-CCCCccchhHHHHHHHHHhCCCCCCCc-hhhHhhhcc-----------------------
Q 011184 210 KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSH-ALDLIRDRN----------------------- 264 (491)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~~-~~~~~~~~~----------------------- 264 (491)
....+++.|+|||.+.+.. ++.++|||||||++|||++|+.||... .........
T Consensus 159 ~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (292)
T d1unla_ 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238 (292)
T ss_dssp CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCC
T ss_pred eeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccc
Confidence 2335678899999987665 689999999999999999999886322 111100000
Q ss_pred ccccccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 265 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
................+++.+.+|+.+||+.||.+|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~ 282 (292)
T d1unla_ 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00000001112233456788999999999999999999999987
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2e-46 Score=356.93 Aligned_cols=253 Identities=15% Similarity=0.146 Sum_probs=197.8
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCC-cceEEeEeecCCeeEEEEecC
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNR-LTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n-iv~~~~~~~~~~~~~lv~e~~ 135 (491)
.|++++.||+|+||+||+|+. .+|+.||||++.... ....+.+|+++++.++|+| |+.+.+++..++..++||||+
T Consensus 8 rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~ 85 (299)
T d1ckia_ 8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 85 (299)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred EEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc--cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc
Confidence 478889999999999999995 568999999987543 3456889999999997666 555666667788899999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeC---CCCCeEEccCCCcccCCCC---
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD---EDGNPRLSTFGLMKNSRDG--- 209 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~---~~~~~kl~Dfgla~~~~~~--- 209 (491)
. ++|...+.. ....+++..+..++.|++.||+|||+++ ||||||||+|||++ .+..+||+|||+++.....
T Consensus 86 ~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~ 162 (299)
T d1ckia_ 86 G-PSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 162 (299)
T ss_dssp C-CBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTC
T ss_pred C-Cchhhhhhh-ccCCCcHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHhhccccccCCCceeeeeccCcceeccccccc
Confidence 5 677666643 4567999999999999999999999999 99999999999985 4567999999999865322
Q ss_pred --------CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccc--cccccccccCCCCc
Q 011184 210 --------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL--QMLTDSCLEGQFTD 279 (491)
Q Consensus 210 --------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 279 (491)
....||+.|+|||.+.+..++.++|||||||++|||+||+.||............. ............+.
T Consensus 163 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (299)
T d1ckia_ 163 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK 242 (299)
T ss_dssp CBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTT
T ss_pred cceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhcc
Confidence 24468999999999999899999999999999999999999886543221111000 00000000111233
Q ss_pred hhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccc
Q 011184 280 DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 315 (491)
Q Consensus 280 ~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~ 315 (491)
.+++++.+++.+||+.||++||++.++.+.|+.+..
T Consensus 243 ~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~ 278 (299)
T d1ckia_ 243 GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 278 (299)
T ss_dssp TSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHH
Confidence 566789999999999999999999999988887654
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=2.8e-46 Score=354.00 Aligned_cols=255 Identities=15% Similarity=0.147 Sum_probs=204.9
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCC-CCcceEEeEeecCCeeEEEEecC
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRN-NRLTNLLGCCCEGDERLLVAEYM 135 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~~~~~~~~~~~~~lv~e~~ 135 (491)
.|++++.||+|+||+||+|+. .+|+.||||++.... +...+.+|+++++.++| +||+.+++++..+...++||||+
T Consensus 6 ~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~ 83 (293)
T d1csna_ 6 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL 83 (293)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec
Confidence 467888899999999999995 468999999986543 34568899999999965 89999999999999999999999
Q ss_pred CCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCC-----CCCeEEccCCCcccCCC--
Q 011184 136 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-----DGNPRLSTFGLMKNSRD-- 208 (491)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~-----~~~~kl~Dfgla~~~~~-- 208 (491)
+++|.+++.. ....++...+..++.|++.||+|||+++ ||||||||+|||++. ++.+||+|||+++....
T Consensus 84 -~~~l~~~~~~-~~~~~~~~~~~~i~~q~~~~l~~lH~~g-iiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~ 160 (293)
T d1csna_ 84 -GPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV 160 (293)
T ss_dssp -CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred -CCCHHHHHHh-hccchhhHHHHHHHHHHHHHHHHHHHCC-ceeccCCccceeecCcccccCCceEEcccceeEEcccCc
Confidence 6999998864 4457999999999999999999999999 999999999999974 57899999999976432
Q ss_pred ---------CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhh--ccccccccccccCCC
Q 011184 209 ---------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD--RNLQMLTDSCLEGQF 277 (491)
Q Consensus 209 ---------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 277 (491)
.....||+.|||||++.+..++.++|||||||++|||+||+.||.+........ ...............
T Consensus 161 ~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (293)
T d1csna_ 161 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLREL 240 (293)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHH
T ss_pred cccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHh
Confidence 224568999999999999999999999999999999999999986432111000 000000000111122
Q ss_pred CchhHHHHHHHHHHhccCCCCCCCChhHHHHHhccccccC
Q 011184 278 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 317 (491)
Q Consensus 278 ~~~~~~~~~~li~~cl~~dp~~Rps~~~il~~L~~~~~~~ 317 (491)
+..+|+++.+++..|+..+|++||+++.+.+.|+.+....
T Consensus 241 ~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~~ 280 (293)
T d1csna_ 241 CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL 280 (293)
T ss_dssp TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHHc
Confidence 3345678999999999999999999999999888776543
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=7e-46 Score=357.84 Aligned_cols=245 Identities=16% Similarity=0.210 Sum_probs=196.5
Q ss_pred CCccccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccC-CCCcceEEeEeec--CCeeEE
Q 011184 55 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNRLTNLLGCCCE--GDERLL 130 (491)
Q Consensus 55 ~~~~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~--~~~~~l 130 (491)
+...|++++.||+|+||+||+|+. .+|+.||||+++.. ..+.+.+|+++|+.++ ||||++++++|.. ....++
T Consensus 33 ~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~ 109 (328)
T d3bqca1 33 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL 109 (328)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEE
T ss_pred CCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeE
Confidence 345788999999999999999995 56999999999743 3678999999999995 9999999999874 356899
Q ss_pred EEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCC-CeEEccCCCcccCCC-
Q 011184 131 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRD- 208 (491)
Q Consensus 131 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~-~~kl~Dfgla~~~~~- 208 (491)
||||+.+++|.... +.+++..+..++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++....
T Consensus 110 v~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~g-IvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~ 183 (328)
T d3bqca1 110 VFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 183 (328)
T ss_dssp EEECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCGGGCEECCTT
T ss_pred EEeecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhcc-cccccccccceEEcCCCCeeeecccccceeccCC
Confidence 99999999987654 46999999999999999999999999 99999999999998655 599999999986543
Q ss_pred --CCccccCCCCCCcccccCCC-CCCCccchhHHHHHHHHHhCCCCCCCchhhH-----h-------------hhccc--
Q 011184 209 --GKSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----I-------------RDRNL-- 265 (491)
Q Consensus 209 --~~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~~~~~~-----~-------------~~~~~-- 265 (491)
.....+|+.|+|||.+.+.. ++.++||||+||++++|++|+.||....... + .....
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 263 (328)
T d3bqca1 184 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL 263 (328)
T ss_dssp CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCC
T ss_pred CcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhccccc
Confidence 33456899999999987654 7999999999999999999998875432110 0 00000
Q ss_pred ----cc--------cccccccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 266 ----QM--------LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 266 ----~~--------~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.. .............+++++.+||.+||..||++|||++++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~ 318 (328)
T d3bqca1 264 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 318 (328)
T ss_dssp CGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00 00001111122346688999999999999999999999987
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-46 Score=359.67 Aligned_cols=248 Identities=18% Similarity=0.232 Sum_probs=201.7
Q ss_pred CccccccccCCCCCccEEEEEEE-C---CCCEEEEEEeCCCC----CCChhHHHHHHHHHhccCC-CCcceEEeEeecCC
Q 011184 56 FAVENIVSEHGEKAPNVVYKGKL-E---NQRRIAVKRFNRMA----WPDPRQFLEEARSVGQLRN-NRLTNLLGCCCEGD 126 (491)
Q Consensus 56 ~~~~~~i~~lG~G~~g~Vy~~~~-~---~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H-~niv~~~~~~~~~~ 126 (491)
.++|++++.||+|+||+||+|.. . +|+.||||+++... ....+.+.+|++++++++| |||+++++++.+..
T Consensus 23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~ 102 (322)
T d1vzoa_ 23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 102 (322)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCC
Confidence 35588889999999999999984 2 47899999986432 2235678899999999966 89999999999999
Q ss_pred eeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccC
Q 011184 127 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 206 (491)
Q Consensus 127 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~ 206 (491)
..++||||+.+|+|.+++.. .+.+++.....++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 103 ~~~~v~e~~~~~~L~~~i~~--~~~~~e~~~~~~~~Qi~~al~~lH~~~-ivHrDiKp~Nill~~~~~vkL~DFG~a~~~ 179 (322)
T d1vzoa_ 103 KLHLILDYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEF 179 (322)
T ss_dssp EEEEEECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred ceeeeeecccccHHHHHHHh--cccccHHHHHHHHHHHHHHHHHhhcCC-EEeccCCccceeecCCCCEEEeeccchhhh
Confidence 99999999999999999874 456788999999999999999999999 999999999999999999999999998764
Q ss_pred CC-----CCccccCCCCCCcccccCCC--CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccccccCCCCc
Q 011184 207 RD-----GKSYSTNLAFTPPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 279 (491)
Q Consensus 207 ~~-----~~~~~~t~~y~aPE~~~~~~--~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (491)
.. .....|++.|++||.+.+.. ++.++|||||||+||+|++|+.||.................. ....++.
T Consensus 180 ~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~--~~~~~~~ 257 (322)
T d1vzoa_ 180 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK--SEPPYPQ 257 (322)
T ss_dssp CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH--CCCCCCT
T ss_pred cccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhccc--CCCCCcc
Confidence 32 23456889999999997653 688999999999999999999998654322211111111111 1223455
Q ss_pred hhHHHHHHHHHHhccCCCCCCCC-----hhHHHH
Q 011184 280 DDGTELVRLASRCLQYEPRERPN-----PKSLVT 308 (491)
Q Consensus 280 ~~~~~~~~li~~cl~~dp~~Rps-----~~~il~ 308 (491)
..++++.+|+.+||++||.+||| ++|+++
T Consensus 258 ~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~ 291 (322)
T d1vzoa_ 258 EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 291 (322)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred cCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence 67889999999999999999995 788876
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-45 Score=356.18 Aligned_cols=245 Identities=16% Similarity=0.196 Sum_probs=188.0
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeec------CCee
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCE------GDER 128 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~------~~~~ 128 (491)
.|++++.||+|+||+||+|.. .+|+.||||++...... ....+.+|+.+|++++||||++++++|.. .+..
T Consensus 18 ~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~ 97 (355)
T d2b1pa1 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV 97 (355)
T ss_dssp TEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEE
T ss_pred CeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCcee
Confidence 588999999999999999995 46999999999754432 23468899999999999999999999964 3678
Q ss_pred EEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC
Q 011184 129 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 208 (491)
Q Consensus 129 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~ 208 (491)
|+||||+.++.+ +.+. ..+++..++.++.||+.||.|||+.| |+||||||+|||++.++.+|++|||+++....
T Consensus 98 ~iv~Ey~~~~l~-~~~~----~~~~~~~i~~~~~qil~gl~~LH~~g-iiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~ 171 (355)
T d2b1pa1 98 YLVMELMDANLC-QVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 171 (355)
T ss_dssp EEEEECCSEEHH-HHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred EEEEeccchHHH-Hhhh----cCCCHHHHHHHHHHHHHHHHHhhhcc-cccccCCccccccccccceeeechhhhhcccc
Confidence 999999975544 4442 45899999999999999999999999 99999999999999999999999999876543
Q ss_pred C---CccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhcccccc-----------------
Q 011184 209 G---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML----------------- 268 (491)
Q Consensus 209 ~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~----------------- 268 (491)
. ....+|+.|+|||++.+..++.++||||+||++++|++|+.||.+..............
T Consensus 172 ~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 251 (355)
T d2b1pa1 172 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 251 (355)
T ss_dssp ---------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHH
T ss_pred ccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHH
Confidence 2 34568999999999999999999999999999999999999886543221111100000
Q ss_pred ----------------cccccc---CCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 269 ----------------TDSCLE---GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 269 ----------------~~~~~~---~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
...... .......++++.+|+.+||..||++|||++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~ 310 (355)
T d2b1pa1 252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 310 (355)
T ss_dssp HHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 000000 0011235678999999999999999999999997
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-45 Score=356.39 Aligned_cols=247 Identities=16% Similarity=0.201 Sum_probs=193.9
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCC--ChhHHHHHHHHHhccCCCCcceEEeEeecC-----CeeE
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEG-----DERL 129 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~~~~~~~~~-----~~~~ 129 (491)
.|++++.||+|+||+||+|+. .+|+.||||+++..... ..+.+.+|+++|++++|||||++++++... ...+
T Consensus 19 rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~ 98 (348)
T d2gfsa1 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV 98 (348)
T ss_dssp TEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCC
T ss_pred CeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceE
Confidence 488899999999999999994 57999999999765432 234688999999999999999999998643 3346
Q ss_pred EEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCCcccCCC-
Q 011184 130 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD- 208 (491)
Q Consensus 130 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~~~~- 208 (491)
+||+|+.||+|.+++. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+|++|||++.....
T Consensus 99 ~i~~~~~gg~L~~~~~---~~~l~e~~~~~i~~qil~aL~~LH~~g-iiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~ 174 (348)
T d2gfsa1 99 YLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 174 (348)
T ss_dssp EEEEECCSEEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCC----CCTGG
T ss_pred EEEEeecCCchhhhcc---cccccHHHHHHHHHHHHHHHHHHHhCC-CcccccCCccccccccccccccccchhcccCcc
Confidence 6777888999999984 457999999999999999999999999 99999999999999999999999999876543
Q ss_pred CCccccCCCCCCcccccCCC-CCCCccchhHHHHHHHHHhCCCCCCCchhhHhhhccccccccc----------------
Q 011184 209 GKSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS---------------- 271 (491)
Q Consensus 209 ~~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~vl~elltg~~~~~~~~~~~~~~~~~~~~~~~---------------- 271 (491)
.....||+.|+|||.+.+.. ++.++|||||||++|+|++|+.||.+.................
T Consensus 175 ~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 254 (348)
T d2gfsa1 175 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNY 254 (348)
T ss_dssp GSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHH
T ss_pred cccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhh
Confidence 34556889999999877654 6889999999999999999999987653222111110000000
Q ss_pred ------cccC---CCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 272 ------CLEG---QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 272 ------~~~~---~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.... ......++++.+||.+||+.||.+|||++|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~ 300 (348)
T d2gfsa1 255 IQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 300 (348)
T ss_dssp HTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhc
Confidence 0000 001235678999999999999999999999997
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.6e-39 Score=317.76 Aligned_cols=249 Identities=17% Similarity=0.197 Sum_probs=188.4
Q ss_pred cccccccCCCCCccEEEEEEE-CCCCEEEEEEeCCCCCCChhHHHHHHHHHhccC-----------CCCcceEEeEeec-
Q 011184 58 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-----------NNRLTNLLGCCCE- 124 (491)
Q Consensus 58 ~~~~i~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~~~~~~~~- 124 (491)
.|+++++||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+.+++.++ |+||+++++++..
T Consensus 14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~ 92 (362)
T d1q8ya_ 14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 92 (362)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence 488999999999999999995 579999999997532 12456788999998885 4789999988764
Q ss_pred -CCeeEEEEecCCCC-CHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccccceeeCCCCC------e
Q 011184 125 -GDERLLVAEYMPNE-TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGN------P 195 (491)
Q Consensus 125 -~~~~~lv~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~iiH~Dlkp~Nill~~~~~------~ 195 (491)
....+++|+++..+ +............+++..+..++.||+.||.|||+ .+ |+||||||+|||++.++. +
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~-IvHrDlKp~NIll~~~~~~~~~~~~ 171 (362)
T d1q8ya_ 93 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPENLIQI 171 (362)
T ss_dssp ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECSCCSGGGEEEEEEETTTTEEEE
T ss_pred cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcC-cccccCChhHeeeeccCccccccee
Confidence 34566666666544 33333333355678999999999999999999998 77 999999999999986553 9
Q ss_pred EEccCCCcccCCC-CCccccCCCCCCcccccCCCCCCCccchhHHHHHHHHHhCCCCCCCchhhH-------hh------
Q 011184 196 RLSTFGLMKNSRD-GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-------IR------ 261 (491)
Q Consensus 196 kl~Dfgla~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~vl~elltg~~~~~~~~~~~-------~~------ 261 (491)
+++|||.+..... .....||+.|+|||++.+..++.++||||+||++++|++|+.||....... ..
T Consensus 172 kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~l 251 (362)
T d1q8ya_ 172 KIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELL 251 (362)
T ss_dssp EECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHH
T ss_pred eEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHh
Confidence 9999999876543 345578999999999999999999999999999999999999875331100 00
Q ss_pred ---------hc-----------cccccccc---------cccCCCCchhHHHHHHHHHHhccCCCCCCCChhHHHH
Q 011184 262 ---------DR-----------NLQMLTDS---------CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 308 (491)
Q Consensus 262 ---------~~-----------~~~~~~~~---------~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~~il~ 308 (491)
.. ....+... ......+...++++.+|+.+||..||.+|||++|+++
T Consensus 252 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~ 327 (362)
T d1q8ya_ 252 GELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 327 (362)
T ss_dssp CSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred CCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00 00000000 0012234567889999999999999999999999987
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.90 E-value=7.9e-25 Score=192.51 Aligned_cols=162 Identities=16% Similarity=0.137 Sum_probs=119.4
Q ss_pred ccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCC-----C-------------hhHHHHHHHHHhccCCCCcceEEeEe
Q 011184 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP-----D-------------PRQFLEEARSVGQLRNNRLTNLLGCC 122 (491)
Q Consensus 61 ~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----~-------------~~~~~~E~~~l~~l~H~niv~~~~~~ 122 (491)
+..+||+|+||+||+|+..+|+.||||+++..... . .....+|...+.++.|++++..+++.
T Consensus 4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~ 83 (191)
T d1zara2 4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE 83 (191)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence 45678999999999999888999999987642211 0 12345688899999999999988764
Q ss_pred ecCCeeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccccceeeCCCCCeEEccCCC
Q 011184 123 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 202 (491)
Q Consensus 123 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~iiH~Dlkp~Nill~~~~~~kl~Dfgl 202 (491)
. .+++|||+++..+.. ++......++.|++.+|.|||+++ |+||||||+|||+++++ ++|+|||+
T Consensus 84 ~----~~lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH~~g-iiHrDiKP~NILv~~~~-~~liDFG~ 148 (191)
T d1zara2 84 G----NAVLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFYHRG-IVHGDLSQYNVLVSEEG-IWIIDFPQ 148 (191)
T ss_dssp T----TEEEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEEETTE-EEECCCTT
T ss_pred C----CEEEEEeeccccccc---------hhhHHHHHHHHHHHHHHHHHhhCC-EEEccCChhheeeeCCC-EEEEECCC
Confidence 2 379999998765432 233445678999999999999999 99999999999999655 89999999
Q ss_pred cccCCCCCccccCCCCCC------cccccCCCCCCCccchhHHHHH
Q 011184 203 MKNSRDGKSYSTNLAFTP------PEYLRTGRVTPESVIYSFGTLL 242 (491)
Q Consensus 203 a~~~~~~~~~~~t~~y~a------PE~~~~~~~~~~~Dv~slG~vl 242 (491)
|......... .|.. .+.+ ...++.++|+||+.--+
T Consensus 149 a~~~~~~~~~----~~l~rd~~~~~~~f-~r~y~~~~d~~s~~~~~ 189 (191)
T d1zara2 149 SVEVGEEGWR----EILERDVRNIITYF-SRTYRTEKDINSAIDRI 189 (191)
T ss_dssp CEETTSTTHH----HHHHHHHHHHHHHH-HHHHCCCCCHHHHHHHH
T ss_pred cccCCCCCcH----HHHHHHHHHHHHHH-cCCCCCcccHHHHHHHH
Confidence 8765433211 0111 0111 24578899999986544
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.83 E-value=3.2e-20 Score=148.75 Aligned_cols=106 Identities=26% Similarity=0.366 Sum_probs=102.5
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHH
Q 011184 382 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 461 (491)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (491)
+..++.+|+.+++.|+|++|+..|+++|+.+|+ ++.+|.++|.+|..+|++++|+.+|+++++++|+++.+|+++|.++
T Consensus 3 ~~~l~~~g~~~~~~g~~~eAi~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~~ 81 (117)
T d1elwa_ 3 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAAL 81 (117)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chhhhhcccccccccccccccchhhhhHHHhccchhhHHHHHHHHH
Confidence 557889999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHCCChHHHHHHHHHHHcccccccccc
Q 011184 462 SAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 462 ~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
..+|++++|+.+|++|++++|++..++
T Consensus 82 ~~~~~~~~A~~~~~~a~~~~p~~~~~~ 108 (117)
T d1elwa_ 82 EFLNRFEEAKRTYEEGLKHEANNPQLK 108 (117)
T ss_dssp HHTTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999998765
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.79 E-value=1.5e-19 Score=159.40 Aligned_cols=107 Identities=22% Similarity=0.351 Sum_probs=102.5
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 460 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (491)
++..+.++|+.+++.|+|++|+..|++||+++|+ ++.+|+++|.||.++|++++|+.+|++||+++|+++.+|+++|.+
T Consensus 3 ~a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~-~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~~a~~~lg~~ 81 (201)
T d2c2la1 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 81 (201)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCcHHHHHHHHHH
Confidence 4678999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHHHcccccccccc
Q 011184 461 LSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
|..+|+|++|+.+|++|++++|++...+
T Consensus 82 ~~~l~~~~~A~~~~~~al~l~p~~~~~~ 109 (201)
T d2c2la1 82 QLEMESYDEAIANLQRAYSLAKEQRLNF 109 (201)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHCCCHHHHHHHHHHHHHhCcccHHHH
Confidence 9999999999999999999999876543
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=5.7e-19 Score=149.79 Aligned_cols=110 Identities=24% Similarity=0.307 Sum_probs=105.1
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 457 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (491)
....+..+..+|+.+++.|+|++|+..|++||+++|+ +..+|.++|.+|..+|++++|+.+|++||+++|+++.+|+++
T Consensus 6 ~l~~a~~l~~~gn~~~~~~~y~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~~~~a~~~~ 84 (159)
T d1a17a_ 6 ALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRR 84 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHhhhccccchh-hhhhhhhhHHHHHhccccchHHHHHHHHHHHcccchHHHHHH
Confidence 3467888999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 458 AAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 458 g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
|.++..+|+|++|+.+|++|++++|.+..++
T Consensus 85 g~~~~~~g~~~eA~~~~~~a~~~~p~~~~~~ 115 (159)
T d1a17a_ 85 AASNMALGKFRAALRDYETVVKVKPHDKDAK 115 (159)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Confidence 9999999999999999999999999987653
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.76 E-value=3.1e-18 Score=143.99 Aligned_cols=112 Identities=19% Similarity=0.233 Sum_probs=103.0
Q ss_pred hhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc---------------HHHHhhHHHHHHhcCChHHHHHHHH
Q 011184 377 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---------------PTVYARRSLCYLMSDMPQDALNDAM 441 (491)
Q Consensus 377 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~ 441 (491)
+....+..+...|+.+|+.|+|.+|+..|++||+.-+... ..+|.|+|.||.++|++++|+.+|+
T Consensus 12 e~~~~a~~~~~~G~~~f~~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Al~~~~ 91 (153)
T d2fbna1 12 EKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHAS 91 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcchhhhhhHHHHHhhhhHHHHHHhhHHHHHHHhcccchhhhhhh
Confidence 4667888999999999999999999999999998766411 2468899999999999999999999
Q ss_pred HHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 442 QAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 442 ~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
+||+++|+++++|+++|.+|..+|++++|+.+|++|++++|++.++.
T Consensus 92 ~al~~~p~~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~~ 138 (153)
T d2fbna1 92 KVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIR 138 (153)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred ccccccchhhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999999999999999999999988764
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.74 E-value=8.5e-18 Score=143.94 Aligned_cols=112 Identities=13% Similarity=0.127 Sum_probs=103.2
Q ss_pred hhhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC--------------cHHHHhhHHHHHHhcCChHHHHHHHH
Q 011184 376 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--------------SPTVYARRSLCYLMSDMPQDALNDAM 441 (491)
Q Consensus 376 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~--------------~~~~~~~~~~~~~~~~~~~~A~~~~~ 441 (491)
.+....+..+.++|+.+|+.|+|++|+..|++||+..|.. ...+|.|+|.||.++|++++|+.+++
T Consensus 7 ~ek~~~a~~l~~~G~~~~~~~~~~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~y~k~~~~~~A~~~~~ 86 (170)
T d1p5qa1 7 EEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCN 86 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhccccchHHHhhhchhHHHHHHHHHHHHHhhhhcccccchhh
Confidence 4566778899999999999999999999999999987752 13568899999999999999999999
Q ss_pred HHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHccccccccc
Q 011184 442 QAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 442 ~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
+||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++..+
T Consensus 87 ~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~~~ 132 (170)
T d1p5qa1 87 KALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAA 132 (170)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHH
T ss_pred hhhhccccchhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHH
Confidence 9999999999999999999999999999999999999999998764
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.72 E-value=1.8e-17 Score=141.65 Aligned_cols=113 Identities=15% Similarity=0.175 Sum_probs=102.6
Q ss_pred hhhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC--------------cHHHHhhHHHHHHhcCChHHHHHHHH
Q 011184 376 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--------------SPTVYARRSLCYLMSDMPQDALNDAM 441 (491)
Q Consensus 376 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~--------------~~~~~~~~~~~~~~~~~~~~A~~~~~ 441 (491)
.+....+..+..+|+.+++.|+|.+|+..|++||...|.. ...+|.|+|.||..+|++++|+.+|+
T Consensus 9 ~E~~~~a~~~~e~G~~~~~~~~~~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Ai~~~~ 88 (168)
T d1kt1a1 9 KEKLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCD 88 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhccchhhhhhcchhHHHHHHhHHHHHHHhhhcccchhhhh
Confidence 4566788999999999999999999999999999754431 23568899999999999999999999
Q ss_pred HHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 442 QAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 442 ~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
+|++++|++..+|+++|.+|..+|+|++|+.+|++|++++|++..++
T Consensus 89 ~al~l~p~~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~~~~ 135 (168)
T d1kt1a1 89 KALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAAR 135 (168)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHH
T ss_pred hhhhcccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999999999999999999999988654
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.70 E-value=3.8e-17 Score=139.79 Aligned_cols=111 Identities=18% Similarity=0.226 Sum_probs=100.7
Q ss_pred hhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhc----------------CCCCcHHHHhhHHHHHHhcCChHHHHHHH
Q 011184 377 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA----------------GTMVSPTVYARRSLCYLMSDMPQDALNDA 440 (491)
Q Consensus 377 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~----------------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~ 440 (491)
.....+..+...|+.++..|+|++|++.|++||+. +|. ...++.++|.+|.++|++++|+.+|
T Consensus 22 ~~~~~a~~~~~~~~~~~~~~~y~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~Ai~~~ 100 (169)
T d1ihga1 22 KILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGAVDSC 100 (169)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhhhhHHHHHhChh-hHHHHHHHHHHHHhhcccchhhhhh
Confidence 34455677889999999999999999999999853 455 6678999999999999999999999
Q ss_pred HHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 441 MQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 441 ~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
++||+++|+++.+|+++|.+|..+|+|++|+++|++|++++|++..+.
T Consensus 101 ~~al~~~p~~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~~~~ 148 (169)
T d1ihga1 101 LEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQ 148 (169)
T ss_dssp HHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hhhhhhhhhhhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999999999999999999999999987653
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=4.8e-17 Score=132.14 Aligned_cols=104 Identities=13% Similarity=0.085 Sum_probs=96.7
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCch-------H
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH-------I 452 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~-------~ 452 (491)
+.+..+.++|+.+++.|+|++|+++|++||+++|+ +..++.++|.+|..+|+|++|+.+|++||+++|.+. .
T Consensus 2 ~~a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~~~a~ 80 (128)
T d1elra_ 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAK 80 (128)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 35778899999999999999999999999999999 999999999999999999999999999999999874 5
Q ss_pred HHHHHHHHHHHCCChHHHHHHHHHHHcccccc
Q 011184 453 ASYLQAAALSAMGMENEAQVALKEGTTLEAKK 484 (491)
Q Consensus 453 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 484 (491)
+|+++|.++..++++++|+++|++++.+++..
T Consensus 81 ~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~~ 112 (128)
T d1elra_ 81 AYARIGNSYFKEEKYKDAIHFYNKSLAEHRTP 112 (128)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCH
Confidence 78888999999999999999999999887653
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.67 E-value=2.6e-16 Score=143.99 Aligned_cols=109 Identities=13% Similarity=-0.008 Sum_probs=104.1
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 457 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (491)
....+..++.+|..+++.|+|++|++.|++||+++|+ ++.+|+++|.+|..+|++++|+.+|++|++++|+++.+|+++
T Consensus 33 ~~~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l 111 (259)
T d1xnfa_ 33 DDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNR 111 (259)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCC-CHHHHhhhchHHHHHHHHHHhhhhhhHHHHHHhhhhhhHHHH
Confidence 3467889999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHHHccccccccc
Q 011184 458 AAALSAMGMENEAQVALKEGTTLEAKKNST 487 (491)
Q Consensus 458 g~~~~~~~~~~~A~~~~~~al~l~~~~~~~ 487 (491)
|.+|..+|++++|++.|+++++++|++...
T Consensus 112 g~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 141 (259)
T d1xnfa_ 112 GIALYYGGRDKLAQDDLLAFYQDDPNDPFR 141 (259)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccHHH
Confidence 999999999999999999999999987643
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.66 E-value=2.5e-16 Score=124.53 Aligned_cols=97 Identities=12% Similarity=0.053 Sum_probs=93.1
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 460 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (491)
.....++.|..+++.|++++|+..|+++++.+|+ ++.+|.++|.++..+|++++|+.+|++|++++|+++.+|+++|.+
T Consensus 15 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~la~~ 93 (112)
T d1hxia_ 15 YHENPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVS 93 (112)
T ss_dssp GCSCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhhHHHHHHHhhhcccccc-cchhhhhhhhhhhhhhhHHHhhcccccccccccccccchHHHHHH
Confidence 3446688999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHHH
Q 011184 461 LSAMGMENEAQVALKEGT 478 (491)
Q Consensus 461 ~~~~~~~~~A~~~~~~al 478 (491)
|..+|++++|++.|++.|
T Consensus 94 y~~~g~~~~A~~~l~~~l 111 (112)
T d1hxia_ 94 HTNEHNANAALASLRAWL 111 (112)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHh
Confidence 999999999999999986
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.63 E-value=1.3e-15 Score=132.92 Aligned_cols=103 Identities=14% Similarity=0.075 Sum_probs=94.3
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHH
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 459 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~ 459 (491)
.++..++++|..++..|+|++|++.|+++ .|. ++.+|+|+|.+|..+|++++|+++|++||+++|+++.+|+++|.
T Consensus 3 ~~~~~l~~~g~~~~~~~d~~~Al~~~~~i---~~~-~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~~~~a~~~~g~ 78 (192)
T d1hh8a_ 3 VEAISLWNEGVLAADKKDWKGALDAFSAV---QDP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGM 78 (192)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTS---SSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHhc---CCC-CHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhhhHHHHHH
Confidence 35667889999999999999999999874 444 57889999999999999999999999999999999999999999
Q ss_pred HHHHCCChHHHHHHHHHHHcccccccc
Q 011184 460 ALSAMGMENEAQVALKEGTTLEAKKNS 486 (491)
Q Consensus 460 ~~~~~~~~~~A~~~~~~al~l~~~~~~ 486 (491)
++..+|+|++|+++|++|++..+.+..
T Consensus 79 ~~~~~g~~~~A~~~~~kAl~~~~~n~~ 105 (192)
T d1hh8a_ 79 LYYQTEKYDLAIKDLKEALIQLRGNQL 105 (192)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTTTCSE
T ss_pred HHHhhccHHHHHHHHHHHHHhCccCch
Confidence 999999999999999999998776653
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=4.9e-16 Score=124.37 Aligned_cols=101 Identities=10% Similarity=-0.026 Sum_probs=92.1
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcC---ChHHHHHHHHHHHhhCCCc--hHHHHHHHHHH
Q 011184 387 KKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD---MPQDALNDAMQAQIISPIW--HIASYLQAAAL 461 (491)
Q Consensus 387 ~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~al~l~p~~--~~a~~~~g~~~ 461 (491)
++++.+...++|++|.+.|++||.++|+ ++.+++|+|.++.+.+ ++++|+..|+++++.+|.. ..+|+++|.+|
T Consensus 4 ~l~n~~~~~~~l~~Ae~~Y~~aL~~~p~-~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~y 82 (122)
T d1nzna_ 4 AVLNELVSVEDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGN 82 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHH
Confidence 5677889999999999999999999999 9999999999998754 4567999999999999866 56999999999
Q ss_pred HHCCChHHHHHHHHHHHcccccccccc
Q 011184 462 SAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 462 ~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
..+|+|++|+++|++||+++|++..|.
T Consensus 83 ~~~g~~~~A~~~~~~aL~~~P~~~~A~ 109 (122)
T d1nzna_ 83 YRLKEYEKALKYVRGLLQTEPQNNQAK 109 (122)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHhhhHHHHHHHHHHHHhCcCCHHHH
Confidence 999999999999999999999998764
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.59 E-value=6.8e-15 Score=128.16 Aligned_cols=105 Identities=16% Similarity=0.105 Sum_probs=97.1
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCc----------
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---------- 450 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~---------- 450 (491)
++..++++|.+++..|+|++|++.|++||+++|+ .+.+|+++|.+|.++|++++|+.+|++|++..|.+
T Consensus 35 ~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~-~~~a~~~~g~~~~~~g~~~~A~~~~~kAl~~~~~n~~~~~~~~~~ 113 (192)
T d1hh8a_ 35 HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGL 113 (192)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTB
T ss_pred CHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhh-hhhhHHHHHHHHHhhccHHHHHHHHHHHHHhCccCchHHHHHhhh
Confidence 4567999999999999999999999999999999 99999999999999999999999999999876643
Q ss_pred ------hHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccc
Q 011184 451 ------HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 486 (491)
Q Consensus 451 ------~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 486 (491)
..+++++|.++..+|++++|++.|++|+++.|+...
T Consensus 114 ~~~~~~~e~~~n~a~~~~~~~~~~~A~~~l~~A~~~~~~~~~ 155 (192)
T d1hh8a_ 114 QFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRH 155 (192)
T ss_dssp CCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGG
T ss_pred hcccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcch
Confidence 478999999999999999999999999999887543
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.59 E-value=2.4e-15 Score=126.56 Aligned_cols=110 Identities=15% Similarity=0.113 Sum_probs=95.9
Q ss_pred HHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-----------cHHHHhhHHHHHHhcCChHHHHHHHHHHHhhC
Q 011184 379 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----------SPTVYARRSLCYLMSDMPQDALNDAMQAQIIS 447 (491)
Q Consensus 379 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~ 447 (491)
...+..++..|+.+++.|+|++|+..|++||++.|+. ...+|+++|.+|..+|++++|+.+++++|++.
T Consensus 6 ~a~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~ 85 (156)
T d2hr2a1 6 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYF 85 (156)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhcc
Confidence 3455666777999999999999999999999988862 13679999999999999999999999999886
Q ss_pred CC-----------chHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 448 PI-----------WHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 448 p~-----------~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
|. ...+|+++|.+|..+|++++|+++|++|+++.|+.....
T Consensus 86 ~~~~~~~~~~~~~~~~a~~~~g~~~~~lg~~eeA~~~~~~Al~l~~~~~~~~ 137 (156)
T d2hr2a1 86 NRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGET 137 (156)
T ss_dssp HHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCC
T ss_pred cccccccccccchhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHhhchH
Confidence 53 355899999999999999999999999999998876543
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.56 E-value=8.2e-16 Score=127.46 Aligned_cols=100 Identities=12% Similarity=0.042 Sum_probs=89.3
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhc----------CChHHHHHHHHHHHhhCCCchHHHHHHH
Q 011184 389 GDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMS----------DMPQDALNDAMQAQIISPIWHIASYLQA 458 (491)
Q Consensus 389 g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~----------~~~~~A~~~~~~al~l~p~~~~a~~~~g 458 (491)
+..+-+.+.|++|++.|++|++++|+ ++.+++++|.++..+ +.+++|+..|++||+++|+++.+|+++|
T Consensus 4 ~~~~~r~~~fe~A~~~~e~al~~~P~-~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~~~~a~~~lG 82 (145)
T d1zu2a1 4 ETEFDRILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIG 82 (145)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hHHHHHHccHHHHHHHHHHHHhhCCc-chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcchhhHHHhhHH
Confidence 34566788899999999999999999 999999999999854 5568899999999999999999999999
Q ss_pred HHHHHCCC-----------hHHHHHHHHHHHccccccccccc
Q 011184 459 AALSAMGM-----------ENEAQVALKEGTTLEAKKNSTAG 489 (491)
Q Consensus 459 ~~~~~~~~-----------~~~A~~~~~~al~l~~~~~~~~~ 489 (491)
.+|..+|+ |++|+++|++|++++|++..++.
T Consensus 83 ~~y~~~g~~~~~~~~~~~~~~~A~~~~~kal~l~P~~~~~~~ 124 (145)
T d1zu2a1 83 NAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLK 124 (145)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHcccchhhHHHHHHhHHHhhhhhhcccccCCCHHHHHH
Confidence 99988764 79999999999999999886643
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=1.1e-14 Score=137.49 Aligned_cols=119 Identities=10% Similarity=-0.017 Sum_probs=109.7
Q ss_pred hhhhhhhhhHHHHHhHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCC
Q 011184 370 LSFQMWTDQMQETLNSKKKGDVAFRQK-DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISP 448 (491)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p 448 (491)
.....+.-.+.+..+|..+|.++...| ++++|++.|+++|+++|+ +..+|+++|.++..+|++++|++++++|++++|
T Consensus 65 ~~~~ai~lnP~~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~-~~~a~~~~~~~~~~l~~~~eAl~~~~kal~~dp 143 (315)
T d2h6fa1 65 LTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADILNQDA 143 (315)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCT
T ss_pred HHHHHHHHCCCChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHh-hhhHHHHHhHHHHhhccHHHHHHHHhhhhhhhh
Confidence 334445557788999999999998876 699999999999999999 999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHCCChHHHHHHHHHHHccccccccccc
Q 011184 449 IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 489 (491)
Q Consensus 449 ~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~ 489 (491)
++..+|+++|.++..+|++++|+++|++|++++|.+..+|.
T Consensus 144 ~n~~a~~~~~~~~~~~~~~~~Al~~~~~al~~~p~n~~a~~ 184 (315)
T d2h6fa1 144 KNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWN 184 (315)
T ss_dssp TCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHH
T ss_pred cchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHCCccHHHHH
Confidence 99999999999999999999999999999999999988764
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=2.3e-14 Score=135.28 Aligned_cols=107 Identities=12% Similarity=0.153 Sum_probs=99.6
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 460 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (491)
++..+..+|..+...|++++|+..|++++..+|+ ++.+|.++|.+|..+|++++|+..|+++++++|+++.+|+++|.+
T Consensus 171 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~ 249 (323)
T d1fcha_ 171 DPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGIS 249 (323)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ccccchhhHHHHHHHHHHhhhhcccccccccccc-cccchhhhhhcccccccchhHHHHHHHHHHHhhccHHHHHHHHHH
Confidence 3567889999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHHHcccccccccc
Q 011184 461 LSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
|..+|++++|++.|++|++++|++..++
T Consensus 250 ~~~~g~~~~A~~~~~~al~l~p~~~~~~ 277 (323)
T d1fcha_ 250 CINLGAHREAVEHFLEALNMQRKSRGPR 277 (323)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHTC----
T ss_pred HHHCCCHHHHHHHHHHHHHhCCcChhhh
Confidence 9999999999999999999999987654
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=1.5e-14 Score=136.46 Aligned_cols=110 Identities=10% Similarity=-0.075 Sum_probs=103.4
Q ss_pred HHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCC-hHHHHHHHHHHHhhCCCchHHHHHH
Q 011184 379 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM-PQDALNDAMQAQIISPIWHIASYLQ 457 (491)
Q Consensus 379 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~-~~~A~~~~~~al~l~p~~~~a~~~~ 457 (491)
+.-++++...|.++.+.+.+++|++.|++||+++|+ +..+|+++|.++..+|+ +++|+.+++++++++|++..+|+++
T Consensus 40 p~~~~a~~~~~~~~~~~e~~~~Al~~~~~ai~lnP~-~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~~~~a~~~~ 118 (315)
T d2h6fa1 40 DKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAA-NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHR 118 (315)
T ss_dssp HHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHCCC-ChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 455667778899999999999999999999999999 99999999999999875 9999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHHHccccccccccc
Q 011184 458 AAALSAMGMENEAQVALKEGTTLEAKKNSTAG 489 (491)
Q Consensus 458 g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~ 489 (491)
|.++..+|++++|++.|++|++++|++..+|.
T Consensus 119 ~~~~~~l~~~~eAl~~~~kal~~dp~n~~a~~ 150 (315)
T d2h6fa1 119 RVLVEWLRDPSQELEFIADILNQDAKNYHAWQ 150 (315)
T ss_dssp HHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHH
T ss_pred hHHHHhhccHHHHHHHHhhhhhhhhcchHHHH
Confidence 99999999999999999999999999998874
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=3.8e-13 Score=126.74 Aligned_cols=107 Identities=9% Similarity=0.062 Sum_probs=101.0
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 460 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (491)
+....+++|..+++.|+|++|+..|+++|+.+|+ ++.+|.++|.+|..+|++++|+..|++|++++|++..+|+++|.+
T Consensus 18 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~ 96 (323)
T d1fcha_ 18 DHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVS 96 (323)
T ss_dssp TCSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccccccccc
Confidence 4445688999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHCCChHHHHHHHHHHHcccccccccc
Q 011184 461 LSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 461 ~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
|..+|++++|++.|++++.++|+.....
T Consensus 97 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 124 (323)
T d1fcha_ 97 FTNESLQRQACEILRDWLRYTPAYAHLV 124 (323)
T ss_dssp HHHTTCHHHHHHHHHHHHHTSTTTGGGC
T ss_pred ccccccccccccchhhHHHhccchHHHH
Confidence 9999999999999999999999876543
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=2.6e-13 Score=130.17 Aligned_cols=111 Identities=14% Similarity=0.053 Sum_probs=105.0
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 457 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (491)
.+.++..+..+|..+...|++++|++.|++++...|. ....+..++.++...|++++|+..|+++++++|+++.+|+++
T Consensus 267 ~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 345 (388)
T d1w3ba_ 267 QPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNL 345 (388)
T ss_dssp CSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHhhhccCCc-cchhhhHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4456778999999999999999999999999999999 889999999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHHHccccccccccc
Q 011184 458 AAALSAMGMENEAQVALKEGTTLEAKKNSTAG 489 (491)
Q Consensus 458 g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~ 489 (491)
|.+|..+|++++|+++|++|++++|++..++.
T Consensus 346 a~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~ 377 (388)
T d1w3ba_ 346 ASVLQQQGKLQEALMHYKEAIRISPTFADAYS 377 (388)
T ss_dssp HHHHHTTTCCHHHHHHHHHHHTTCTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 99999999999999999999999999987753
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.42 E-value=3.1e-13 Score=102.77 Aligned_cols=85 Identities=15% Similarity=-0.026 Sum_probs=76.1
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------cHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV------SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIAS 454 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~ 454 (491)
+++..++.|..+++.|+|++|+..|++|+++.|.. ...++.++|.++.++|++++|+..|++||+++|+++.++
T Consensus 4 saddc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~~a~ 83 (95)
T d1tjca_ 4 TAEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (95)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCHHHH
Confidence 46788999999999999999999999999876541 367899999999999999999999999999999999999
Q ss_pred HHHHHHHHHCC
Q 011184 455 YLQAAALSAMG 465 (491)
Q Consensus 455 ~~~g~~~~~~~ 465 (491)
+|++.+...++
T Consensus 84 ~Nl~~~~~~l~ 94 (95)
T d1tjca_ 84 GNLKYFEYIMA 94 (95)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhC
Confidence 99988766543
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.36 E-value=7.4e-13 Score=126.88 Aligned_cols=100 Identities=12% Similarity=-0.007 Sum_probs=95.8
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHCC
Q 011184 386 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMG 465 (491)
Q Consensus 386 ~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~ 465 (491)
+.+|..+++.|+|++|++.|+++++.+|+ ++.++..+|.+|..+|++++|+..|+++++++|+++.+|+++|.+|..+|
T Consensus 3 l~la~~~~~~G~~~~A~~~~~~~l~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l~~~~~~~g 81 (388)
T d1w3ba_ 3 MELAHREYQAGDFEAAERHCMQLWRQEPD-NTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERG 81 (388)
T ss_dssp CTHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHhhhhc
Confidence 46799999999999999999999999999 89999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHcccccccc
Q 011184 466 MENEAQVALKEGTTLEAKKNS 486 (491)
Q Consensus 466 ~~~~A~~~~~~al~l~~~~~~ 486 (491)
++++|++.|..+++.++....
T Consensus 82 ~~~~A~~~~~~~~~~~~~~~~ 102 (388)
T d1w3ba_ 82 QLQEAIEHYRHALRLKPDFID 102 (388)
T ss_dssp CHHHHHHHHHHHHHHCTTCHH
T ss_pred ccccccccccccccccccccc
Confidence 999999999999999887654
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.29 E-value=1.1e-11 Score=105.09 Aligned_cols=94 Identities=14% Similarity=0.091 Sum_probs=87.4
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 457 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (491)
.+..+..+.++|..+++.|+|++|+..|++||+++|+ ++.+|+++|.+|..+|++++|+.+|++|++++|++..++..+
T Consensus 73 ~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~-~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~~~~~~l 151 (169)
T d1ihga1 73 QPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAEL 151 (169)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred ChhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhhh-hhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4567778899999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHH
Q 011184 458 AAALSAMGMENEAQV 472 (491)
Q Consensus 458 g~~~~~~~~~~~A~~ 472 (491)
+.++..+..+.++.+
T Consensus 152 ~~~~~~l~~~~~~~k 166 (169)
T d1ihga1 152 LKVKQKIKAQKDKEK 166 (169)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999988887777643
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.29 E-value=7e-12 Score=99.24 Aligned_cols=87 Identities=8% Similarity=-0.083 Sum_probs=81.3
Q ss_pred hhhhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHH
Q 011184 375 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIAS 454 (491)
Q Consensus 375 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~ 454 (491)
....+.++..+..+|.+++..|+|++|+..|+++++++|+ ++.+|+++|.++..+|++++|+.+|+++++++|+++.++
T Consensus 30 l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 108 (117)
T d1elwa_ 30 IKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLK 108 (117)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred HhcCCcchhhhhcccccccccccccccchhhhhHHHhccc-hhhHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 3446677889999999999999999999999999999999 899999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 011184 455 YLQAAALS 462 (491)
Q Consensus 455 ~~~g~~~~ 462 (491)
..++.+..
T Consensus 109 ~~l~~l~~ 116 (117)
T d1elwa_ 109 EGLQNMEA 116 (117)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhC
Confidence 99988754
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.27 E-value=3.5e-12 Score=115.92 Aligned_cols=94 Identities=17% Similarity=0.080 Sum_probs=84.5
Q ss_pred hcCHHHHHHHHHHHHhcCCC---CcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHCCChHHHH
Q 011184 395 QKDLKDAIECYTQFIDAGTM---VSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQ 471 (491)
Q Consensus 395 ~~~~~~A~~~~~~al~~~p~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~ 471 (491)
..+++.|+..+++++...+. ..+.+|+++|.+|..+|++++|+.+|++||+++|+++.+|+++|.+|..+|++++|+
T Consensus 12 ~~~~e~al~~~~e~l~~~~~~~~~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~~A~ 91 (259)
T d1xnfa_ 12 TLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAY 91 (259)
T ss_dssp CHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHH
T ss_pred cHHHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCCCHHHHhhhchHHHHHHHHHHhh
Confidence 45678888889999875332 256789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcccccccccc
Q 011184 472 VALKEGTTLEAKKNSTA 488 (491)
Q Consensus 472 ~~~~~al~l~~~~~~~~ 488 (491)
+.|++|++++|++..++
T Consensus 92 ~~~~~al~~~p~~~~a~ 108 (259)
T d1xnfa_ 92 EAFDSVLELDPTYNYAH 108 (259)
T ss_dssp HHHHHHHHHCTTCTHHH
T ss_pred hhhhHHHHHHhhhhhhH
Confidence 99999999999988765
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.23 E-value=3.7e-11 Score=101.60 Aligned_cols=96 Identities=13% Similarity=0.067 Sum_probs=85.6
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 460 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (491)
.+..+.++|.++++.|+|++|+..|+++|+++|+ +..+|+++|.+|..+|++++|+.+|++|++++|++..++..++.+
T Consensus 63 ~~~~~~Nla~~~~~l~~~~~Ai~~~~~al~l~p~-~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~ 141 (168)
T d1kt1a1 63 LLAAFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQIFMC 141 (168)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHhhhcccchhhhhhhhhcccc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3456788999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHCCChHH-HHHHHHHH
Q 011184 461 LSAMGMENE-AQVALKEG 477 (491)
Q Consensus 461 ~~~~~~~~~-A~~~~~~a 477 (491)
...++++.+ ..+.|.+.
T Consensus 142 ~~~~~~~~e~~kk~~~~~ 159 (168)
T d1kt1a1 142 QKKAKEHNERDRRTYANM 159 (168)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHH
Confidence 988887765 34444433
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.21 E-value=3.1e-11 Score=102.27 Aligned_cols=90 Identities=12% Similarity=0.029 Sum_probs=83.6
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHH
Q 011184 382 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 461 (491)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (491)
...+.++|.++++.|+|++|+..+++||+++|+ ++.+++++|.+|..+|++++|+.+|++|++++|++..+...++.++
T Consensus 62 ~~~~~nla~~y~k~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~~~~~~l~~~~ 140 (170)
T d1p5qa1 62 LASHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQ 140 (170)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhcccccchhhhhhhcccc-chhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 346778999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHCCChHHHHH
Q 011184 462 SAMGMENEAQV 472 (491)
Q Consensus 462 ~~~~~~~~A~~ 472 (491)
..++++.+...
T Consensus 141 ~~~~~~~~~e~ 151 (170)
T d1p5qa1 141 QRIRRQLAREK 151 (170)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88887776644
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.21 E-value=1.1e-10 Score=99.34 Aligned_cols=104 Identities=8% Similarity=-0.038 Sum_probs=94.0
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC---------------------cHHHHhhHHHHHHhcCChHHHHH
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV---------------------SPTVYARRSLCYLMSDMPQDALN 438 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~---------------------~~~~~~~~~~~~~~~~~~~~A~~ 438 (491)
...+++...|..+...|++++|++.|++|+.+.+.+ ...++.+++.++..+|++++|+.
T Consensus 9 ~~f~~~~~~g~~~~~~g~~e~A~~~~~~AL~l~rG~~l~~~~~~~w~~~~r~~l~~~~~~a~~~la~~~~~~g~~~~Al~ 88 (179)
T d2ff4a2 9 GRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIA 88 (179)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHH
Confidence 456788999999999999999999999999987752 12567899999999999999999
Q ss_pred HHHHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHH-------Hccccc
Q 011184 439 DAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEG-------TTLEAK 483 (491)
Q Consensus 439 ~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a-------l~l~~~ 483 (491)
+++++++++|.+..+|.+++.+|..+|++++|++.|+++ +.++|.
T Consensus 89 ~~~~al~~~P~~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L~~eLG~~P~ 140 (179)
T d2ff4a2 89 ELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPG 140 (179)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCcC
Confidence 999999999999999999999999999999999999998 556665
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.20 E-value=4.4e-11 Score=100.13 Aligned_cols=100 Identities=13% Similarity=-0.026 Sum_probs=88.4
Q ss_pred hhhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHH
Q 011184 376 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 455 (491)
Q Consensus 376 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~ 455 (491)
.-.+.++..|..+|..++..|++++|+..|++||+++|+ +..+|.++|.++..+|++++|+.+|+++++++|++..++.
T Consensus 38 ~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~-~~~a~~~~g~~~~~~g~~~eA~~~~~~a~~~~p~~~~~~~ 116 (159)
T d1a17a_ 38 ELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKM 116 (159)
T ss_dssp HHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred ccchhhhhhhhhhHHHHHhccccchHHHHHHHHHHHccc-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Confidence 345678889999999999999999999999999999999 8899999999999999999999999999999999999998
Q ss_pred HHHHHH--HHCCChHHHHHHHHH
Q 011184 456 LQAAAL--SAMGMENEAQVALKE 476 (491)
Q Consensus 456 ~~g~~~--~~~~~~~~A~~~~~~ 476 (491)
.++.+. ...+.+++|+.....
T Consensus 117 ~l~~~~~~~~~~~~~~a~~~~~~ 139 (159)
T d1a17a_ 117 KYQECNKIVKQKAFERAIAGDEH 139 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCcHH
Confidence 888775 445567777765443
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.17 E-value=4.8e-11 Score=99.16 Aligned_cols=84 Identities=8% Similarity=0.039 Sum_probs=78.3
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHH
Q 011184 382 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 461 (491)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (491)
...+.++|..+++.|+|++|++.|++||+++|+ +..+|+++|.+|..+|++++|+.+|++|++++|++..+...++.+.
T Consensus 67 ~~~~~Nla~~~~~l~~~~~Al~~~~~al~~~p~-~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~~~~l~~~~ 145 (153)
T d2fbna1 67 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCV 145 (153)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHhcccchhhhhhhccccccch-hhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 456789999999999999999999999999999 8999999999999999999999999999999999999999999887
Q ss_pred HHCCC
Q 011184 462 SAMGM 466 (491)
Q Consensus 462 ~~~~~ 466 (491)
.++++
T Consensus 146 ~kl~~ 150 (153)
T d2fbna1 146 NKLKE 150 (153)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.14 E-value=5.3e-11 Score=93.17 Aligned_cols=70 Identities=14% Similarity=-0.028 Sum_probs=66.7
Q ss_pred HHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 419 VYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 419 ~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
.+++.|.++.+.|++++|+..|+++++++|+++.+|+.+|.++..+|++++|+.+|++|++++|++..+|
T Consensus 18 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~a~ 87 (112)
T d1hxia_ 18 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVH 87 (112)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhhhcccccccchhhhhhhhhhhhhhhHHHhhcccccccccccccccch
Confidence 3567899999999999999999999999999999999999999999999999999999999999998765
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.13 E-value=5e-11 Score=95.81 Aligned_cols=72 Identities=13% Similarity=-0.051 Sum_probs=67.5
Q ss_pred HHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 417 PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
+..+.++|.++...|+|++|+.+|++||+++|+++.+|+++|.+|..+|+|++|+++|++|++++|++..++
T Consensus 4 a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 75 (128)
T d1elra_ 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDY 75 (128)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHH
Confidence 345678999999999999999999999999999999999999999999999999999999999999987654
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.12 E-value=4.6e-11 Score=90.42 Aligned_cols=73 Identities=11% Similarity=-0.158 Sum_probs=65.9
Q ss_pred HHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCc-------hHHHHHHHHHHHHCCChHHHHHHHHHHHccccccccccc
Q 011184 417 PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW-------HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 489 (491)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~-------~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~ 489 (491)
+.-.+++|.++.+.|+|++|+..|++|+++.|.+ +.+|+++|.++.++|++++|++.|++||+++|++..++.
T Consensus 5 addc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~~a~~ 84 (95)
T d1tjca_ 5 AEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (95)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCHHHHH
Confidence 3446789999999999999999999999997654 689999999999999999999999999999999988754
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.10 E-value=9.7e-11 Score=101.75 Aligned_cols=72 Identities=10% Similarity=0.015 Sum_probs=68.5
Q ss_pred HHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 417 PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
+..+...|..|.+.|+|++|+..|++||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++..+|
T Consensus 4 a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~~a~ 75 (201)
T d2c2la1 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAH 75 (201)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCcHHHH
Confidence 556778899999999999999999999999999999999999999999999999999999999999998775
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.06 E-value=1.1e-10 Score=95.90 Aligned_cols=95 Identities=14% Similarity=-0.015 Sum_probs=82.3
Q ss_pred hhhhHHHHHhHHHHHHHHHH----------hcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCC-----------h
Q 011184 375 WTDQMQETLNSKKKGDVAFR----------QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM-----------P 433 (491)
Q Consensus 375 ~~~~~~~~~~~~~~g~~~~~----------~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~-----------~ 433 (491)
..-.+.++..+++.|.+++. .+.+++|++.|++||+++|+ ++.+|+++|.+|..+|+ |
T Consensus 24 l~~~P~~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~-~~~a~~~lG~~y~~~g~~~~~~~~~~~~~ 102 (145)
T d1zu2a1 24 YKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFLTPDETEAKHNF 102 (145)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_pred HhhCCcchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcch-hhHHHhhHHHHHHHcccchhhHHHHHHhH
Confidence 34467889999999999985 45568999999999999999 99999999999988754 7
Q ss_pred HHHHHHHHHHHhhCCCchHHHHHHHHHHHHCCChHHH
Q 011184 434 QDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEA 470 (491)
Q Consensus 434 ~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A 470 (491)
++|++.|++|++++|++..++..+|.+....+.+.++
T Consensus 103 ~~A~~~~~kal~l~P~~~~~~~~L~~~~ka~~~~~e~ 139 (145)
T d1zu2a1 103 DLATQFFQQAVDEQPDNTHYLKSLEMTAKAPQLHAEA 139 (145)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHTHHHHHHHH
T ss_pred HHhhhhhhcccccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999987666666654
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.03 E-value=1.3e-10 Score=92.14 Aligned_cols=89 Identities=12% Similarity=0.006 Sum_probs=77.2
Q ss_pred hhhHHHHHhHHHHHHHHHH---hcCHHHHHHHHHHHHhcCCCCc-HHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCch
Q 011184 376 TDQMQETLNSKKKGDVAFR---QKDLKDAIECYTQFIDAGTMVS-PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH 451 (491)
Q Consensus 376 ~~~~~~~~~~~~~g~~~~~---~~~~~~A~~~~~~al~~~p~~~-~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~ 451 (491)
...+.++..+++.|..+++ .+++++|++.|++++..+|.+. ..+++++|.+|.++|++++|+.+|+++|+++|++.
T Consensus 27 ~~~p~~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~y~~~g~~~~A~~~~~~aL~~~P~~~ 106 (122)
T d1nzna_ 27 AAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNN 106 (122)
T ss_dssp HHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hhCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCcCCH
Confidence 3455678899999999986 4567789999999999998722 45899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHC
Q 011184 452 IASYLQAAALSAM 464 (491)
Q Consensus 452 ~a~~~~g~~~~~~ 464 (491)
.|...++.+..++
T Consensus 107 ~A~~l~~~I~~~~ 119 (122)
T d1nzna_ 107 QAKELERLIDKAM 119 (122)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999998877654
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.01 E-value=1e-10 Score=116.80 Aligned_cols=108 Identities=8% Similarity=-0.065 Sum_probs=74.8
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHH
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 457 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~ 457 (491)
.+..+..+.+.|..+.+.|++++|+..|.+++..+|. .++.++|.++...|++++|+.+|++|++++|+++.+|+++
T Consensus 116 ~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~---~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~~~~~~~~L 192 (497)
T d1ya0a1 116 DLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQ---HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQL 192 (497)
T ss_dssp ---------------------------CCHHHHHHHH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHH
T ss_pred ChhhHHHHHHhHHHHHhCCCHHHHHHHHHHHhCCCHH---HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCchHHHHHH
Confidence 3466778899999999999999999999999988875 5778899999999999999999999999999999999999
Q ss_pred HHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 458 AAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 458 g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
|.++...|++.+|+.+|.+|+.++|....|+
T Consensus 193 g~~~~~~~~~~~A~~~y~ral~~~~~~~~a~ 223 (497)
T d1ya0a1 193 AILASSKGDHLTTIFYYCRSIAVKFPFPAAS 223 (497)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHSSSBCCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhCCCCCHHHH
Confidence 9999999999999999999999999877664
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.94 E-value=1.5e-09 Score=102.28 Aligned_cols=103 Identities=10% Similarity=-0.106 Sum_probs=61.4
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCC--hHHHHHHHHHHHhhCCCchHHH-HHHHHHH
Q 011184 385 SKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM--PQDALNDAMQAQIISPIWHIAS-YLQAAAL 461 (491)
Q Consensus 385 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~--~~~A~~~~~~al~l~p~~~~a~-~~~g~~~ 461 (491)
+...+..+...|++++|+..|+++++.+|+ ++.+|.++|.++..+++ +++|+..++++++++|.+..++ +..|.++
T Consensus 76 l~~~~~~~~~~~~~~~al~~~~~~l~~~pk-~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~~~~~~~ 154 (334)
T d1dcea1 76 LETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAA 154 (334)
T ss_dssp HHTTSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HhhhcchHHHHHHHHHHHHHHHHHHHhCCC-cHHHHHHhhHHHHHhccccHHHHHHHHHHHHhhCchhhhhhhhHHHHHH
Confidence 333444445555566666666666666666 56666666666555543 5566666666666666665554 3455666
Q ss_pred HHCCChHHHHHHHHHHHcccccccccc
Q 011184 462 SAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 462 ~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
...+++++|++.++++++++|.+..+|
T Consensus 155 ~~~~~~~~Al~~~~~~i~~~p~~~~a~ 181 (334)
T d1dcea1 155 QAAVAPAEELAFTDSLITRNFSNYSSW 181 (334)
T ss_dssp HTCCCHHHHHHHHHTTTTTTCCCHHHH
T ss_pred HhccccHHHHHHHHHHHHcCCCCHHHH
Confidence 666666666666666666666665554
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=98.88 E-value=4.5e-09 Score=94.96 Aligned_cols=100 Identities=14% Similarity=0.022 Sum_probs=72.7
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchH----------------
Q 011184 389 GDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI---------------- 452 (491)
Q Consensus 389 g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~---------------- 452 (491)
+..+++.|++++|+..|+++|+.+|+ +..++.+++.+|...|++++|+..++++++++|++..
T Consensus 3 ~~~aL~~G~l~eAl~~l~~al~~~P~-d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~~~~~~l~~ll~a~~~~~ 81 (264)
T d1zbpa1 3 WKNALSEGQLQQALELLIEAIKASPK-DASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQARK 81 (264)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHTCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhccccH
Confidence 34456677777777777777777777 6677777777777777777777777777777665444
Q ss_pred -------------------HHHHHHHHHHHCCChHHHHHHHHHHHccccccccccc
Q 011184 453 -------------------ASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 489 (491)
Q Consensus 453 -------------------a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~ 489 (491)
+++..+.++...|++++|.+.++++.++.|.....|.
T Consensus 82 ~a~~~~~~~~~~~~p~~~~~~l~~a~~~~~~gd~~~A~~~~~~a~e~~p~~~~~~~ 137 (264)
T d1zbpa1 82 DFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEKGFLAN 137 (264)
T ss_dssp HHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCCEEET
T ss_pred HHHHHhhhhhcccCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCCCcccc
Confidence 4445555556678999999999999999998876654
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.87 E-value=2.1e-09 Score=99.22 Aligned_cols=106 Identities=11% Similarity=0.027 Sum_probs=91.3
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcC-----CCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCc----
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAG-----TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---- 450 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-----p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~---- 450 (491)
..++.|.+.|+.+...|+|++|++.|.+|+++. +......|.++|.+|.++|++++|++.|++++++.+..
T Consensus 35 ~Aa~~y~~aa~~y~~~~~~~~A~~~y~kA~~~~~~~~~~~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~ 114 (290)
T d1qqea_ 35 EAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFR 114 (290)
T ss_dssp HHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccch
Confidence 446678888999999999999999999999863 22245689999999999999999999999999998766
Q ss_pred --hHHHHHHHHHHHH-CCChHHHHHHHHHHHccccccc
Q 011184 451 --HIASYLQAAALSA-MGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 451 --~~a~~~~g~~~~~-~~~~~~A~~~~~~al~l~~~~~ 485 (491)
..++.++|.+|.. +|++++|++.|++|+++.+...
T Consensus 115 ~~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~~~ 152 (290)
T d1qqea_ 115 RGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQ 152 (290)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 6789999998865 6999999999999999876543
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.80 E-value=1.1e-08 Score=94.32 Aligned_cols=108 Identities=8% Similarity=-0.196 Sum_probs=91.9
Q ss_pred HHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-----cHHHHhhHHHHHHh-cCChHHHHHHHHHHHhhCCC---
Q 011184 379 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLM-SDMPQDALNDAMQAQIISPI--- 449 (491)
Q Consensus 379 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~-~~~~~~A~~~~~~al~l~p~--- 449 (491)
...+..+.+.|..+.+.|++++|++.|++++++.+.. ...++.++|.+|.. .|++++|++.|++|+++.+.
T Consensus 74 ~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~~~~ 153 (290)
T d1qqea_ 74 DEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQS 153 (290)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccchhHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 3457789999999999999999999999999876541 14567788887754 69999999999999988543
Q ss_pred ---chHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccc
Q 011184 450 ---WHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 486 (491)
Q Consensus 450 ---~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 486 (491)
...++.++|.++..+|+|++|++.|++++.+.+.+..
T Consensus 154 ~~~~~~~~~~la~~~~~~g~y~~A~~~~~~~~~~~~~~~~ 193 (290)
T d1qqea_ 154 VALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRL 193 (290)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTT
T ss_pred hhhhhhHHHHHHHHHHHcChHHHHHHHHHHHHHhCccchh
Confidence 3567999999999999999999999999999887653
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.79 E-value=1.4e-08 Score=95.50 Aligned_cols=95 Identities=9% Similarity=-0.072 Sum_probs=83.2
Q ss_pred HHhcC-HHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCC----------hHHHHHHHHHHHhhCCCchHHHHHHHHHH
Q 011184 393 FRQKD-LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM----------PQDALNDAMQAQIISPIWHIASYLQAAAL 461 (491)
Q Consensus 393 ~~~~~-~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~----------~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (491)
.+.++ .++|++.|+++|+++|+ +..+|+.++.++..++. +++|+..++++++.+|+++.+|+.+|.++
T Consensus 39 ~~~~~~~~~al~~~~~~l~~~P~-~~~a~~~r~~~l~~l~~~~~~~~~~~~~~~al~~~~~~l~~~pk~~~~~~~~~~~~ 117 (334)
T d1dcea1 39 RQAGELDESVLELTSQILGANPD-FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLL 117 (334)
T ss_dssp HHTTCCSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HhcccccHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHhhHHH
Confidence 34444 48999999999999999 88999888877665444 78999999999999999999999999999
Q ss_pred HHCCC--hHHHHHHHHHHHcccccccccc
Q 011184 462 SAMGM--ENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 462 ~~~~~--~~~A~~~~~~al~l~~~~~~~~ 488 (491)
..+++ +++|+..++++++++|++..++
T Consensus 118 ~~~~~~~~~~a~~~~~~al~~~~~~~~~~ 146 (334)
T d1dcea1 118 SRLPEPNWARELELCARFLEADERNFHCW 146 (334)
T ss_dssp HTCSSCCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHhccccHHHHHHHHHHHHhhCchhhhhh
Confidence 88875 8999999999999999987764
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.66 E-value=6.6e-08 Score=90.27 Aligned_cols=109 Identities=10% Similarity=-0.043 Sum_probs=94.6
Q ss_pred hhhHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc----HHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCc-
Q 011184 376 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS----PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW- 450 (491)
Q Consensus 376 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~- 450 (491)
.+....++...-+|..++..|++++|++.|+++++..|++. ..++..+|.+|..+|++++|+..|++++++.|..
T Consensus 6 ~~~~~~ae~~~lrA~~~~~~g~~~~A~~~~~~aL~~~~~~~~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~~~~~ 85 (366)
T d1hz4a_ 6 REDTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHD 85 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT
T ss_pred cccchhHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCCCcHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhc
Confidence 34445677777889999999999999999999999999843 3478889999999999999999999999887543
Q ss_pred -----hHHHHHHHHHHHHCCChHHHHHHHHHHHcccccc
Q 011184 451 -----HIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 484 (491)
Q Consensus 451 -----~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 484 (491)
..+++++|.++...|++..|...+.+++.+.+..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~ 124 (366)
T d1hz4a_ 86 VWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQ 124 (366)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhc
Confidence 5688999999999999999999999999876654
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.66 E-value=1.3e-07 Score=85.35 Aligned_cols=147 Identities=12% Similarity=0.041 Sum_probs=95.8
Q ss_pred HHHHHhcCCccccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccC-CCCcceEEeEeecCC
Q 011184 48 QLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNRLTNLLGCCCEGD 126 (491)
Q Consensus 48 ~~~~~~~~~~~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~ 126 (491)
++.....++. .+...+-++.+.||+... ++..++||+...........+.+|+..+..+. +--+.+++.++..++
T Consensus 8 ~l~~~~~~~~---~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~ 83 (263)
T d1j7la_ 8 ELKKLIEKYR---CVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDG 83 (263)
T ss_dssp HHHHHHTTSE---EEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETT
T ss_pred HHHHhhhceE---EEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCC
Confidence 4444444443 333333344578998875 45667889886555445557889999998884 444788888888888
Q ss_pred eeEEEEecCCCCCHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHh---------------------------------
Q 011184 127 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS--------------------------------- 173 (491)
Q Consensus 127 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~--------------------------------- 173 (491)
..++||++++|.++.+.... .... ..++.++...|..||+
T Consensus 84 ~~~lv~~~l~G~~~~~~~~~----~~~~---~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (263)
T d1j7la_ 84 WSNLLMSEADGVLCSEEYED----EQSP---EKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCE 156 (263)
T ss_dssp EEEEEEECCSSEEHHHHTTT----CSCH---HHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGG
T ss_pred ceEEEEEecccccccccccc----cccH---HHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhh
Confidence 99999999999888654421 0111 1122223333333331
Q ss_pred --------------------C----C-CcccccccccceeeCCCCCeEEccCCCccc
Q 011184 174 --------------------K----G-RALYHDLNAYRILFDEDGNPRLSTFGLMKN 205 (491)
Q Consensus 174 --------------------~----~-~iiH~Dlkp~Nill~~~~~~kl~Dfgla~~ 205 (491)
. . .++|+|+.|.|||+++++.+-|+||+.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T d1j7la_ 157 NWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp GGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence 1 0 168999999999999876677999997653
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.61 E-value=7.4e-08 Score=95.64 Aligned_cols=84 Identities=13% Similarity=-0.030 Sum_probs=79.3
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 460 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~ 460 (491)
....+..+|..+..+|+|++|+.+|.+|++++|+ +...|+++|.++...|++.+|+.+|.+||.++|.++.|+.+++.+
T Consensus 151 ~~~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~-~~~~~~~Lg~~~~~~~~~~~A~~~y~ral~~~~~~~~a~~nL~~~ 229 (497)
T d1ya0a1 151 CQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPS-NGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKA 229 (497)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-BSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 4567899999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHCC
Q 011184 461 LSAMG 465 (491)
Q Consensus 461 ~~~~~ 465 (491)
+.+..
T Consensus 230 ~~~~~ 234 (497)
T d1ya0a1 230 LSKAL 234 (497)
T ss_dssp HHHHT
T ss_pred HHHhh
Confidence 87654
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=98.48 E-value=9.9e-08 Score=78.81 Aligned_cols=69 Identities=16% Similarity=0.077 Sum_probs=59.6
Q ss_pred HHHhhH--HHHHHhcCChHHHHHHHHHHHhhCCCc------------hHHHHHHHHHHHHCCChHHHHHHHHHHHccccc
Q 011184 418 TVYARR--SLCYLMSDMPQDALNDAMQAQIISPIW------------HIASYLQAAALSAMGMENEAQVALKEGTTLEAK 483 (491)
Q Consensus 418 ~~~~~~--~~~~~~~~~~~~A~~~~~~al~l~p~~------------~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 483 (491)
.+|..+ |..+...|+|++|+..|++||+++|+. +.+|.++|.+|..+|+|++|++++++|+++.|+
T Consensus 8 ~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~~~ 87 (156)
T d2hr2a1 8 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 87 (156)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhcccc
Confidence 344444 778888899999999999999999875 468999999999999999999999999999876
Q ss_pred ccc
Q 011184 484 KNS 486 (491)
Q Consensus 484 ~~~ 486 (491)
...
T Consensus 88 ~~~ 90 (156)
T d2hr2a1 88 RGE 90 (156)
T ss_dssp HCC
T ss_pred ccc
Confidence 544
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.46 E-value=2.4e-07 Score=86.24 Aligned_cols=105 Identities=10% Similarity=-0.074 Sum_probs=91.8
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCc---HHHHhhHHHHHHhcCChHHHHHHHHHHHh------hCCCc
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---PTVYARRSLCYLMSDMPQDALNDAMQAQI------ISPIW 450 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~------l~p~~ 450 (491)
..+..+...|..+...|++++|...+.++++..|.+. ...+.++|.++..+|++++|+..+++++. ..|..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 290 (366)
T d1hz4a_ 211 WISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDL 290 (366)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred hHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhcccChHH
Confidence 4556778889999999999999999999999877632 35577899999999999999999999984 45677
Q ss_pred hHHHHHHHHHHHHCCChHHHHHHHHHHHcccccc
Q 011184 451 HIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 484 (491)
Q Consensus 451 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 484 (491)
..+++.+|.+|..+|++++|++.|++|+++.++.
T Consensus 291 ~~~~~~la~~~~~~g~~~~A~~~l~~Al~l~~~~ 324 (366)
T d1hz4a_ 291 NRNLLLLNQLYWQAGRKSDAQRVLLDALKLANRT 324 (366)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhhc
Confidence 8899999999999999999999999999987654
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.38 E-value=6.9e-07 Score=68.79 Aligned_cols=81 Identities=5% Similarity=-0.170 Sum_probs=63.3
Q ss_pred HHhHHHHHHHHHHh---cCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHH
Q 011184 382 TLNSKKKGDVAFRQ---KDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 458 (491)
Q Consensus 382 ~~~~~~~g~~~~~~---~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g 458 (491)
+.+.|+-|..+.+. .+.++|+..++++++.+|.+...+++++|.+|.++|+|++|..+++++|+++|++..|...+-
T Consensus 35 ~qt~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~qA~~L~~ 114 (124)
T d2pqrb1 35 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKS 114 (124)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cchHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcHHHHHHHH
Confidence 45667777777644 556788889998888888734578888889999999999999999999999999988876665
Q ss_pred HHHH
Q 011184 459 AALS 462 (491)
Q Consensus 459 ~~~~ 462 (491)
.+..
T Consensus 115 ~Ie~ 118 (124)
T d2pqrb1 115 MVED 118 (124)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.38 E-value=7.6e-07 Score=68.53 Aligned_cols=76 Identities=7% Similarity=-0.093 Sum_probs=65.2
Q ss_pred CCCcHHHHhhHHHHHHhcCC---hHHHHHHHHHHHhhCCCc-hHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 413 TMVSPTVYARRSLCYLMSDM---PQDALNDAMQAQIISPIW-HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 413 p~~~~~~~~~~~~~~~~~~~---~~~A~~~~~~al~l~p~~-~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
|.......++.|.++.+..+ .++|+..++++++.+|.+ .+++|++|.+|+++|+|++|+.+++++|+++|.+..|.
T Consensus 31 ~~~s~qt~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~qA~ 110 (124)
T d2pqrb1 31 PTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVG 110 (124)
T ss_dssp GGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCCCcchHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcHHHH
Confidence 33345677888888886544 568999999999999977 48999999999999999999999999999999998764
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.27 E-value=3.5e-06 Score=77.56 Aligned_cols=101 Identities=13% Similarity=-0.033 Sum_probs=86.6
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHH-HhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHH
Q 011184 384 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCY-LMSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 462 (491)
Q Consensus 384 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~-~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~ 462 (491)
.|...+....+.|++++|.+.|.+|++..|. ....|...|... ...|+.+.|...|+++++.+|+++..|...+..+.
T Consensus 136 ~w~~~~~~~~~~~~~~~ar~i~~~al~~~~~-~~~~~~~~a~~e~~~~~~~~~a~~i~e~~l~~~p~~~~~w~~y~~~~~ 214 (308)
T d2onda1 136 VYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 214 (308)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 4667777888889999999999999999998 777777776653 44688999999999999999999999999999999
Q ss_pred HCCChHHHHHHHHHHHccccccc
Q 011184 463 AMGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 463 ~~~~~~~A~~~~~~al~l~~~~~ 485 (491)
..|+++.|...|++|++..|.+.
T Consensus 215 ~~g~~~~aR~~fe~ai~~~~~~~ 237 (308)
T d2onda1 215 HLNEDNNTRVLFERVLTSGSLPP 237 (308)
T ss_dssp TTCCHHHHHHHHHHHHHSSSSCG
T ss_pred HcCChHHHHHHHHHHHHhCCCCh
Confidence 99999999999999999776543
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.22 E-value=4e-06 Score=77.19 Aligned_cols=107 Identities=9% Similarity=-0.080 Sum_probs=95.0
Q ss_pred HHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHH
Q 011184 382 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 461 (491)
Q Consensus 382 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~ 461 (491)
...+...+....+.|++++|...|+++|+..|.+...+|...+....+.|++++|.+.|++|++..|.....|...|...
T Consensus 99 ~~l~~~ya~~~~~~~~~~~a~~i~~~~l~~~~~~~~~~w~~~~~~~~~~~~~~~ar~i~~~al~~~~~~~~~~~~~a~~e 178 (308)
T d2onda1 99 MLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALME 178 (308)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 44567778888899999999999999999999855567888888899999999999999999999999999999999875
Q ss_pred H-HCCChHHHHHHHHHHHcccccccccc
Q 011184 462 S-AMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 462 ~-~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
. ..|+.+.|...|++|++.+|++.+.|
T Consensus 179 ~~~~~~~~~a~~i~e~~l~~~p~~~~~w 206 (308)
T d2onda1 179 YYCSKDKSVAFKIFELGLKKYGDIPEYV 206 (308)
T ss_dssp HHTSCCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHhccCHHHHHHHHHHHHHhhhhhHHHH
Confidence 4 46899999999999999999987665
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=98.16 E-value=1.2e-06 Score=78.72 Aligned_cols=63 Identities=21% Similarity=-0.008 Sum_probs=58.6
Q ss_pred HHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHCCChHHHHHHHHHHHcccccccccc
Q 011184 426 CYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 488 (491)
Q Consensus 426 ~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 488 (491)
-.+..|++++|+..|+++++.+|+++.++..+|.+|+..|++++|++.|+++++++|++..++
T Consensus 5 ~aL~~G~l~eAl~~l~~al~~~P~d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~~~~ 67 (264)
T d1zbpa1 5 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGA 67 (264)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcHHHH
Confidence 345779999999999999999999999999999999999999999999999999999987543
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=98.16 E-value=8e-06 Score=72.76 Aligned_cols=67 Identities=18% Similarity=0.185 Sum_probs=52.3
Q ss_pred cEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCC--CCcceEEeEeecCCeeEEEEecCCCCCH
Q 011184 71 NVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRN--NRLTNLLGCCCEGDERLLVAEYMPNETL 140 (491)
Q Consensus 71 g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~~~~~~~~~~~~~lv~e~~~~gsL 140 (491)
+.||+....++..+++|...... ...+..|+..++.+.. -.+++++.+..+++..++||++++|.++
T Consensus 25 ~~v~r~~~~~~~~~vlK~~~~~~---~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~ 93 (255)
T d1nd4a_ 25 AAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL 93 (255)
T ss_dssp CEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred CeEEEEEeCCCCEEEEEeCCccC---HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence 67999988788889999875443 3457789998888843 3467788888888889999999998665
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=98.07 E-value=2e-05 Score=70.43 Aligned_cols=99 Identities=12% Similarity=0.084 Sum_probs=85.2
Q ss_pred HHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHh----cCChHHHHHHHHHHHhhCCCchHHHHH
Q 011184 381 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWHIASYL 456 (491)
Q Consensus 381 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~l~p~~~~a~~~ 456 (491)
+|.+++++|..+++.+||++|++.|++|.+.+ +..+++++|.+|.. ..++..|...++++.... ++.+.++
T Consensus 1 ~p~~~~~lG~~~~~~~d~~~A~~~~~kAa~~g---~~~A~~~Lg~~y~~G~~~~~d~~~a~~~~~~a~~~~--~~~a~~~ 75 (265)
T d1ouva_ 1 DPKELVGLGAKSYKEKDFTQAKKYFEKACDLK---ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHL 75 (265)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCcchhHHHHHHhhccccccc--ccchhhc
Confidence 46789999999999999999999999998764 56788899999987 678999999999987654 7888999
Q ss_pred HHHHHHH----CCChHHHHHHHHHHHcccccc
Q 011184 457 QAAALSA----MGMENEAQVALKEGTTLEAKK 484 (491)
Q Consensus 457 ~g~~~~~----~~~~~~A~~~~~~al~l~~~~ 484 (491)
+|.++.. ..+++.|...|+++.+..+..
T Consensus 76 l~~~~~~~~~~~~~~~~a~~~~~~a~~~g~~~ 107 (265)
T d1ouva_ 76 LGNLYYSGQGVSQNTNKALQYYSKACDLKYAE 107 (265)
T ss_dssp HHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHH
T ss_pred cccccccccccchhhHHHHHHHhhhhhhhhhh
Confidence 9998875 578999999999998776543
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=98.04 E-value=1.7e-05 Score=75.51 Aligned_cols=91 Identities=13% Similarity=0.118 Sum_probs=54.3
Q ss_pred HHHHHHhcCCcccc--ccccCCCCCccEEEEEEEC-CCCEEEEEEeCC------CCC-CChhHHHHHHHHHhcc-CC--C
Q 011184 47 EQLKNATSGFAVEN--IVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNR------MAW-PDPRQFLEEARSVGQL-RN--N 113 (491)
Q Consensus 47 ~~~~~~~~~~~~~~--~i~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~------~~~-~~~~~~~~E~~~l~~l-~H--~ 113 (491)
..+....+-|.... .+.++|.|....||+.... +++.|+||.-.. ..+ ....+...|.+.|+.+ .+ .
T Consensus 14 ~~la~~lg~~~~~~~l~~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~ 93 (392)
T d2pula1 14 VALAVKLGLFPSKSTLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPH 93 (392)
T ss_dssp HHHHHHTTC-----CCEEEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGG
T ss_pred HHHHHHcCCCCCCCCeeEEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCC
Confidence 33333344444333 2457899999999999854 467899996532 111 2344566789888877 33 3
Q ss_pred CcceEEeEeecCCeeEEEEecCCCCC
Q 011184 114 RLTNLLGCCCEGDERLLVAEYMPNET 139 (491)
Q Consensus 114 niv~~~~~~~~~~~~~lv~e~~~~gs 139 (491)
.+++++.+. ++..++|||++++..
T Consensus 94 ~vP~v~~~d--~~~~~lvmE~L~~~~ 117 (392)
T d2pula1 94 LVPRVFYSD--TEMAVTVMEDLSHLK 117 (392)
T ss_dssp GSCCEEEEE--TTTTEEEECCCTTSE
T ss_pred CcceEEEEc--CCCCEEEEeccCCcc
Confidence 466677654 445689999997644
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.94 E-value=1.8e-05 Score=66.19 Aligned_cols=70 Identities=16% Similarity=0.131 Sum_probs=63.5
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHH-------HhhCCCc
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQA-------QIISPIW 450 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a-------l~l~p~~ 450 (491)
.....+.++|..+...|+|++|+..++++++++|. +..+|.+++.+|..+|++.+|+..|+++ +.++|..
T Consensus 65 ~~~~a~~~la~~~~~~g~~~~Al~~~~~al~~~P~-~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L~~eLG~~P~~ 141 (179)
T d2ff4a2 65 DKVLAHTAKAEAEIACGRASAVIAELEALTFEHPY-REPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGP 141 (179)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCH
T ss_pred HHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCcCH
Confidence 34567888999999999999999999999999999 8899999999999999999999999998 5566754
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=97.80 E-value=0.0001 Score=58.19 Aligned_cols=85 Identities=11% Similarity=-0.040 Sum_probs=72.7
Q ss_pred HhcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHh----cCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHH----CC
Q 011184 394 RQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWHIASYLQAAALSA----MG 465 (491)
Q Consensus 394 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~----~~ 465 (491)
...++++|++.|++|.+.+ ++.+.+++|..|.. ..++++|++.|+++.+. .++.+.+++|.+|.. ..
T Consensus 35 ~~~~~~~a~~~~~~aa~~g---~~~a~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~~a~~~Lg~~y~~G~gv~~ 109 (133)
T d1klxa_ 35 SQINKQKLFQYLSKACELN---SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVK 109 (133)
T ss_dssp TTSCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCC
T ss_pred cccCHHHHHHHHhhhhccc---chhhhhhHHHhhhhccccchhhHHHHHHHhhhhcc--CcchHHHHHHHHHHcCCccCC
Confidence 4568999999999998864 56788889998886 46689999999999886 578999999999987 57
Q ss_pred ChHHHHHHHHHHHccccc
Q 011184 466 MENEAQVALKEGTTLEAK 483 (491)
Q Consensus 466 ~~~~A~~~~~~al~l~~~ 483 (491)
++++|+.+|++|.++...
T Consensus 110 d~~~A~~~~~~Aa~~G~~ 127 (133)
T d1klxa_ 110 NEKQAVKTFEKACRLGSE 127 (133)
T ss_dssp CHHHHHHHHHHHHHTTCH
T ss_pred CHHHHHHHHHHHHHCCCH
Confidence 999999999999987543
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=97.67 E-value=0.00014 Score=64.58 Aligned_cols=101 Identities=20% Similarity=0.111 Sum_probs=83.5
Q ss_pred HHHHhHHHHHHHHHH----hcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHh----cCChHHHHHHHHHHHhhCCCch
Q 011184 380 QETLNSKKKGDVAFR----QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWH 451 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~l~p~~~ 451 (491)
.....+..+|..+.. ..+...+...++++.+.. ++.+.+++|.+|.. ..++++|+..|++|.+. .++
T Consensus 140 ~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~a~~~g---~~~A~~~lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~ 214 (265)
T d1ouva_ 140 NDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLK---DSPGCFNAGNMYHHGEGATKNFKEALARYSKACEL--ENG 214 (265)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHT--TCH
T ss_pred cccchhhhhhhhhccCCCcccccccchhhhhcccccc---ccccccchhhhcccCcccccchhhhhhhHhhhhcc--cCH
Confidence 345567778888875 677889999999988653 56788899999987 67899999999999998 478
Q ss_pred HHHHHHHHHHHH----CCChHHHHHHHHHHHccccccc
Q 011184 452 IASYLQAAALSA----MGMENEAQVALKEGTTLEAKKN 485 (491)
Q Consensus 452 ~a~~~~g~~~~~----~~~~~~A~~~~~~al~l~~~~~ 485 (491)
.+++++|.+|.. .+++++|+++|++|.++..+.+
T Consensus 215 ~a~~~LG~~y~~G~g~~~n~~~A~~~~~kAa~~g~~~A 252 (265)
T d1ouva_ 215 GGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGA 252 (265)
T ss_dssp HHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHCcCHHH
Confidence 999999999986 4589999999999998876543
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=97.64 E-value=6e-05 Score=69.61 Aligned_cols=97 Identities=21% Similarity=0.234 Sum_probs=62.1
Q ss_pred CccccCHHHHHHHhcCCc--cccccccCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCcc-
Q 011184 40 SFREFTLEQLKNATSGFA--VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLT- 116 (491)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~--~~~~i~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv- 116 (491)
++..++++.+..+..++. ...-+-.|+ |.-..||+....+|..|++|+...+.+ ..+++..|...+..|...+|.
T Consensus 4 ~f~~L~pd~i~~al~~~g~~~~~~~~~L~-s~EN~vy~v~~~dg~~~VlK~~rp~~~-s~~~i~~E~~~l~~L~~~gipv 81 (325)
T d1zyla1 4 TFQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPV 81 (325)
T ss_dssp CCCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSB
T ss_pred CccccCHHHHHHHHHHcCCCCCcCccccc-cccceeEEEEcCCCCEEEEEEeCCCCC-CHHHHHHHHHHHHHHHhcCCCC
Confidence 456778888877765442 111111232 334689999998999999999876543 456788899999888533322
Q ss_pred -eEE-----eEeecCCeeEEEEecCCCC
Q 011184 117 -NLL-----GCCCEGDERLLVAEYMPNE 138 (491)
Q Consensus 117 -~~~-----~~~~~~~~~~lv~e~~~~g 138 (491)
..+ ..+..++..+.++++++|.
T Consensus 82 ~~p~~~~g~~~~~~~~~~~~l~~~~~G~ 109 (325)
T d1zyla1 82 AAPVAFNGQTLLNHQGFYFAVFPSVGGR 109 (325)
T ss_dssp CCCCCBTTBSCEEETTEEEEEEECCCCE
T ss_pred CCceecCCCeeeeeeeEEEEEEeecCCc
Confidence 111 1123456678899999763
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=97.32 E-value=0.00037 Score=54.78 Aligned_cols=80 Identities=15% Similarity=-0.007 Sum_probs=65.1
Q ss_pred hcCHHHHHHHHHHHHhcCCCCcHHHHhhHHHHHHhcCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHH----CCChHHH
Q 011184 395 QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA----MGMENEA 470 (491)
Q Consensus 395 ~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~l~p~~~~a~~~~g~~~~~----~~~~~~A 470 (491)
..|+++|++.|.+|.+.+-. .+.++++ .....++++|+..++++.+. .++.+++++|..|.. ..++++|
T Consensus 6 ~kd~~~A~~~~~kaa~~g~~---~a~~~l~--~~~~~~~~~a~~~~~~aa~~--g~~~a~~~Lg~~y~~g~~~~~d~~~A 78 (133)
T d1klxa_ 6 KKDLKKAIQYYVKACELNEM---FGCLSLV--SNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKA 78 (133)
T ss_dssp HHHHHHHHHHHHHHHHTTCT---THHHHHH--TCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHH
T ss_pred ccCHHHHHHHHHHHHHCCCh---hhhhhhc--cccccCHHHHHHHHhhhhcc--cchhhhhhHHHhhhhccccchhhHHH
Confidence 35899999999999988643 3344444 34557899999999999876 689999999999986 5689999
Q ss_pred HHHHHHHHccc
Q 011184 471 QVALKEGTTLE 481 (491)
Q Consensus 471 ~~~~~~al~l~ 481 (491)
+++|++|.+..
T Consensus 79 ~~~~~~aa~~g 89 (133)
T d1klxa_ 79 AQYYSKACGLN 89 (133)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHhhhhccC
Confidence 99999998764
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.16 E-value=0.00066 Score=61.96 Aligned_cols=158 Identities=13% Similarity=0.094 Sum_probs=86.8
Q ss_pred ccCHHHHHHHhcCCccccccc--cCCCCCccEEEEEEECCCCEEEEEEeCCCCCCChhHHHHHHHHHhccCCCCc--ceE
Q 011184 43 EFTLEQLKNATSGFAVENIVS--EHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRL--TNL 118 (491)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~i~--~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni--v~~ 118 (491)
.++.+|+.....+|..-++.+ .+..|.-.+.|+....+| .+++|++.... ....+..|++++..|.+.++ +..
T Consensus 2 ~ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g-~yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~pvp~p 78 (316)
T d2ppqa1 2 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLP 78 (316)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred CCCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCC-cEEEEEcCCCC--CHHHHHHHHHHHHhhhhcccccccc
Confidence 467788888888886544443 345676688999987665 48999986432 34556677888888853332 211
Q ss_pred Ee------EeecCCeeEEEEecCCCCCHHH--------------Hhcc----cC-C--CCCCHH----------------
Q 011184 119 LG------CCCEGDERLLVAEYMPNETLAK--------------HLFH----WE-T--HPMKWA---------------- 155 (491)
Q Consensus 119 ~~------~~~~~~~~~lv~e~~~~gsL~~--------------~l~~----~~-~--~~l~~~---------------- 155 (491)
.. +.........++.++.|..... .++. .. . ......
T Consensus 79 i~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (316)
T d2ppqa1 79 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 158 (316)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred ceecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhc
Confidence 11 1112344566677666532210 0000 00 0 000000
Q ss_pred --HHHHHHHHHHHHHHHHHh----CCCcccccccccceeeCCCCCeEEccCCCcc
Q 011184 156 --MRLRVVLHLAQALEYCTS----KGRALYHDLNAYRILFDEDGNPRLSTFGLMK 204 (491)
Q Consensus 156 --~~~~i~~qi~~~L~~LH~----~~~iiH~Dlkp~Nill~~~~~~kl~Dfgla~ 204 (491)
.....+..+...+.-.+. .| +||+|+.++||+++.+...-|+||+.+.
T Consensus 159 ~~~~~~~l~~~~~~~~~~~~~~L~~g-iIHgDl~~dNvl~~~~~v~gvIDF~~~~ 212 (316)
T d2ppqa1 159 EKGLREEIRPEIDYLAAHWPKDLPAG-VIHADLFQDNVFFLGDELSGLIDFYFAC 212 (316)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEE-EECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred chhHHHHHHHHHHhhhccCccccccc-cccCCcchhhhhcccccceeEecccccc
Confidence 011112222233333322 34 8999999999999988877899999865
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.00 E-value=0.002 Score=60.65 Aligned_cols=73 Identities=15% Similarity=0.241 Sum_probs=51.6
Q ss_pred cccCCCCCccEEEEEEECC--------CCEEEEEEeCCCCCCChhHHHHHHHHHhccC-CCCcceEEeEeecCCeeEEEE
Q 011184 62 VSEHGEKAPNVVYKGKLEN--------QRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVA 132 (491)
Q Consensus 62 i~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~~~~~~~~~~~~~lv~ 132 (491)
+..++.|-...+|+....+ ...|.+++... ....-...+|..+++.+. +.-.+++++++.. .+|+
T Consensus 47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~--~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~ 120 (395)
T d1nw1a_ 47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN--PETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 120 (395)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS--CCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCC--cchhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEE
Confidence 4577778889999998643 35677777642 223445678999999884 4445678888753 6899
Q ss_pred ecCCCCCH
Q 011184 133 EYMPNETL 140 (491)
Q Consensus 133 e~~~~gsL 140 (491)
||++|.+|
T Consensus 121 efi~g~~l 128 (395)
T d1nw1a_ 121 EYIPSRPL 128 (395)
T ss_dssp CCCCEEEC
T ss_pred EEeccccC
Confidence 99987544
|
| >d1wfda_ a.7.14.1 (A:) Hypothetical protein 1500032H18Rik {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain family: MIT domain domain: Hypothetical protein 1500032H18Rik species: Mouse (Mus musculus) [TaxId: 10090]
Probab=87.67 E-value=0.36 Score=34.08 Aligned_cols=33 Identities=18% Similarity=0.259 Sum_probs=28.8
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFID 410 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 410 (491)
....+..+..+|..+-+.|+|++|+.+|.+||+
T Consensus 11 ~~~~A~~l~~~Av~~D~~g~y~eA~~~Y~~aie 43 (93)
T d1wfda_ 11 DSTAAVAVLKRAVELDAESRYQQALVCYQEGID 43 (93)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 446788899999999999999999999999963
|
| >d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2, NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain-like family: MIT domain domain: Nuclear receptor binding factor 2, NRBF2, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=82.02 E-value=1.3 Score=29.66 Aligned_cols=30 Identities=13% Similarity=0.266 Sum_probs=23.5
Q ss_pred HHHHhHHHHHHHHHHhcCHHHHHHHHHHHH
Q 011184 380 QETLNSKKKGDVAFRQKDLKDAIECYTQFI 409 (491)
Q Consensus 380 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al 409 (491)
.-|-.+-++|..+.+.|.|++||+++.+|.
T Consensus 6 N~AH~~~RrAer~l~~~rydeAIech~kA~ 35 (83)
T d2crba1 6 NLAHQQSRRADRLLAAGKYEEAISCHRKAT 35 (83)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 345566678888899999999999888774
|
| >d1wr0a1 a.7.14.1 (A:5-81) Vacuolar sorting protein 4b (VPS4B, SKD1 protein) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain family: MIT domain domain: Vacuolar sorting protein 4b (VPS4B, SKD1 protein) species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.33 E-value=0.46 Score=32.15 Aligned_cols=33 Identities=12% Similarity=0.321 Sum_probs=27.4
Q ss_pred hHHHHHhHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 011184 378 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFID 410 (491)
Q Consensus 378 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 410 (491)
....+..+..+|...=+.|+|++|+.+|.+|++
T Consensus 7 ~l~~A~~l~~~Av~~D~~~~y~~A~~~Y~~a~~ 39 (77)
T d1wr0a1 7 NLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQ 39 (77)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 446788888899999999999999988888864
|
| >d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2, NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain-like family: MIT domain domain: Nuclear receptor binding factor 2, NRBF2, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=81.28 E-value=1 Score=30.26 Aligned_cols=24 Identities=21% Similarity=0.174 Sum_probs=11.4
Q ss_pred HhhHHHHHHhcCChHHHHHHHHHH
Q 011184 420 YARRSLCYLMSDMPQDALNDAMQA 443 (491)
Q Consensus 420 ~~~~~~~~~~~~~~~~A~~~~~~a 443 (491)
+..+|..+.+.|+|++||++.++|
T Consensus 11 ~~RrAer~l~~~rydeAIech~kA 34 (83)
T d2crba1 11 QSRRADRLLAAGKYEEAISCHRKA 34 (83)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHH
Confidence 334444444455555555544443
|