Query 011190
Match_columns 491
No_of_seqs 294 out of 2282
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 03:02:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011190.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011190hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qdm_A Prophytepsin; aspartic 100.0 6.2E-80 2.1E-84 651.8 35.5 453 31-489 1-453 (478)
2 3psg_A Pepsinogen; hydrolase(a 100.0 5.5E-63 1.9E-67 507.5 32.3 343 30-489 1-345 (370)
3 2x0b_A Renin; hydrolase-hormon 100.0 3.5E-62 1.2E-66 503.0 30.5 348 29-489 7-358 (383)
4 1tzs_A Cathepsin E; hydrolase, 100.0 2.2E-56 7.5E-61 455.8 31.2 305 77-488 12-316 (351)
5 1dpj_A Proteinase A; proteinas 100.0 1.6E-55 5.4E-60 445.6 32.3 301 78-489 3-304 (329)
6 3k1w_A Renin; protease, altern 100.0 7E-56 2.4E-60 450.2 29.8 306 76-488 6-314 (341)
7 3cms_A Chymosin B; hydrolase, 100.0 1.5E-55 5.2E-60 444.5 31.4 296 76-488 2-297 (323)
8 1am5_A Pepsin, acid proteinase 100.0 3.4E-55 1.2E-59 442.2 30.4 297 79-489 3-299 (324)
9 1htr_B Gastricsin; aspartyl pr 100.0 2.4E-55 8.1E-60 444.3 28.7 300 79-489 4-304 (329)
10 4aa9_A Chymosin; hydrolase, as 100.0 3.1E-55 1.1E-59 441.7 28.3 293 79-488 2-294 (320)
11 1miq_A Plasmepsin; aspartic pr 100.0 1.3E-54 4.5E-59 446.1 31.6 295 76-488 50-348 (375)
12 3qvc_A Histo-aspartic protease 100.0 1.2E-54 4.2E-59 454.8 31.5 295 76-488 125-423 (451)
13 2bju_A Plasmepsin II; aspartic 100.0 7.7E-54 2.6E-58 448.3 29.6 296 76-488 126-424 (453)
14 1mpp_A Pepsin; hydrolase(acid 100.0 4.5E-53 1.6E-57 432.9 28.4 301 75-488 5-329 (361)
15 1yg9_A Aspartic protease BLA G 100.0 1E-52 3.5E-57 425.1 27.2 292 77-488 6-303 (330)
16 3c9x_A Trichoderma reesei aspa 100.0 3E-50 1E-54 406.8 31.1 288 84-488 11-304 (329)
17 2apr_A Rhizopuspepsin; hydrola 100.0 5.8E-50 2E-54 404.1 33.0 285 84-488 11-298 (325)
18 1oew_A Endothiapepsin; hydrola 100.0 3.8E-50 1.3E-54 406.1 29.9 285 86-488 13-303 (329)
19 3fv3_A SAPP1P-secreted asparti 100.0 2.8E-49 9.7E-54 401.3 30.9 282 78-476 3-298 (339)
20 1j71_A Candidapepsin, aspartic 100.0 5.5E-49 1.9E-53 398.4 29.8 280 78-478 3-295 (334)
21 2qzx_A Candidapepsin-5; aspart 100.0 1.2E-48 4.3E-53 397.1 32.0 285 78-478 3-302 (342)
22 1izd_A Aspartic proteinase; su 100.0 1.8E-48 6E-53 392.9 28.5 285 79-488 8-297 (323)
23 1ibq_A Aspergillopepsin; aspar 100.0 3.7E-48 1.3E-52 390.9 30.7 283 86-488 12-299 (325)
24 3pvk_A Candidapepsin-2; hydrol 100.0 3.8E-48 1.3E-52 393.4 30.9 284 78-476 3-300 (342)
25 1b5f_A Protein (cardosin A); h 100.0 2E-48 6.9E-53 375.9 25.7 237 78-318 3-239 (239)
26 1wkr_A Polyporopepsin; hydrola 100.0 5.4E-48 1.8E-52 392.1 29.2 286 78-488 3-307 (340)
27 1bxo_A Protein (penicillopepsi 100.0 1.7E-48 5.7E-53 393.1 24.1 286 78-488 7-297 (323)
28 3lpj_A Beta-secretase 1; alzhe 100.0 7.2E-47 2.5E-51 398.4 24.8 233 80-318 66-313 (455)
29 2ewy_A Beta-secretase 2; BACE2 100.0 7.6E-46 2.6E-50 382.3 27.2 233 80-318 5-249 (383)
30 3vf3_A Beta-secretase 1; struc 100.0 1.5E-45 5E-50 382.5 26.4 232 81-318 21-267 (402)
31 2qp8_A Beta-secretase 1; BACE1 100.0 2.5E-45 8.7E-50 379.9 26.0 231 81-318 14-260 (395)
32 3aup_A SBG7S, BG, basic 7S glo 100.0 1.1E-44 3.8E-49 376.0 26.0 298 77-488 9-360 (403)
33 3vla_A EDGP; extracellular, in 100.0 2.4E-44 8.1E-49 373.9 19.8 233 76-318 7-294 (413)
34 1t6e_X Xylanase inhibitor; two 100.0 2.5E-41 8.5E-46 348.2 16.1 222 79-318 4-258 (381)
35 1lya_B Cathepsin D; lysosomal 100.0 3.8E-36 1.3E-40 290.3 22.0 215 169-488 1-215 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 2E-23 7E-28 171.9 11.2 93 78-170 3-96 (97)
37 3rfi_A Asp; PSI, saposin, hydr 99.7 9.7E-18 3.3E-22 140.4 2.4 107 316-423 2-108 (108)
38 1b5f_B Protein (cardosin A); h 99.1 6.6E-11 2.3E-15 94.9 5.6 62 427-489 1-62 (87)
39 2qyp_A Proactivator polypeptid 97.9 4.1E-06 1.4E-10 67.3 3.3 50 383-435 3-52 (91)
40 3bqp_A Proactivator polypeptid 97.8 1E-05 3.4E-10 63.2 3.8 48 385-435 2-49 (80)
41 1l9l_A Granulysin; saposin fol 97.8 1.1E-05 3.6E-10 62.1 3.5 40 385-425 1-40 (74)
42 4ddj_A Saposin-A, protein A; s 97.8 1.9E-05 6.3E-10 62.2 4.2 41 385-425 3-43 (83)
43 2gtg_A Proactivator polypeptid 97.6 5E-05 1.7E-09 59.7 4.0 49 383-434 2-50 (83)
44 1nkl_A NK-lysin; saposin fold, 97.6 4E-05 1.4E-09 59.6 3.2 46 385-434 1-46 (78)
45 1of9_A Pore-forming peptide am 97.6 4.3E-05 1.5E-09 59.2 3.3 47 384-434 1-47 (77)
46 1n69_A Saposin B; lipid bindin 97.3 0.00015 5E-09 56.8 4.0 48 384-434 2-50 (81)
47 2js9_A Saposin-like protein fa 97.3 5E-05 1.7E-09 61.7 0.4 52 382-435 18-69 (99)
48 2i1a_A DNA damage-inducible pr 94.0 0.06 2E-06 46.6 5.2 90 87-201 24-115 (148)
49 2qyp_A Proactivator polypeptid 93.8 0.016 5.4E-07 46.0 0.9 40 321-360 46-85 (91)
50 3bqp_A Proactivator polypeptid 92.6 0.028 9.5E-07 43.1 0.6 37 321-357 43-79 (80)
51 1nkl_A NK-lysin; saposin fold, 90.6 0.065 2.2E-06 41.1 0.8 37 321-357 41-77 (78)
52 1of9_A Pore-forming peptide am 90.4 0.039 1.3E-06 42.3 -0.6 36 321-356 42-77 (77)
53 2gtg_A Proactivator polypeptid 90.4 0.032 1.1E-06 43.3 -1.2 37 321-357 45-81 (83)
54 2js9_A Saposin-like protein fa 90.2 0.045 1.5E-06 44.1 -0.4 37 321-357 63-99 (99)
55 3s8i_A Protein DDI1 homolog 1; 89.8 0.4 1.4E-05 41.5 5.2 90 88-201 23-114 (148)
56 1n69_A Saposin B; lipid bindin 89.2 0.063 2.1E-06 41.5 -0.4 36 321-357 45-80 (81)
57 4ddj_A Saposin-A, protein A; s 87.3 0.065 2.2E-06 41.5 -1.4 37 321-357 45-82 (83)
58 3s64_A AC-SLP-1, saposin-like 83.3 0.19 6.6E-06 39.2 -0.4 40 383-424 8-47 (87)
59 2hs1_A HIV-1 protease; ultra-h 80.2 2.1 7E-05 34.3 4.6 30 90-121 9-38 (99)
60 1l9l_A Granulysin; saposin fol 80.1 0.23 8E-06 37.6 -1.0 33 321-353 41-73 (74)
61 1fmb_A EIAV protease; hydrolas 79.1 1.9 6.4E-05 34.9 4.0 28 89-118 8-35 (104)
62 3ec0_A Protease; HIV-2, inhibi 76.0 3.1 0.00011 33.2 4.5 30 90-121 9-38 (99)
63 3liy_A Protease; hydrolase, hy 72.9 3.1 0.00011 34.0 3.7 33 90-122 11-46 (116)
64 3vcm_P Prorenin; aspartic prot 69.9 2.6 8.8E-05 28.0 2.2 24 29-52 7-30 (43)
65 2hah_A Protease, retropepsin; 65.7 5.4 0.00018 32.8 3.8 28 90-120 15-42 (116)
66 3sqf_A Protease; folded monome 61.1 8.2 0.00028 31.5 4.0 30 90-121 10-39 (114)
67 3slz_A GAG-Pro-POL polyprotein 55.1 13 0.00046 31.1 4.5 31 88-120 21-51 (132)
68 2i1a_A DNA damage-inducible pr 52.2 12 0.00041 31.6 3.9 29 276-311 31-59 (148)
69 3s8i_A Protein DDI1 homolog 1; 50.5 12 0.00041 32.0 3.6 29 276-311 29-57 (148)
70 1htr_P Progastricsin (Pro segm 48.6 9.7 0.00033 24.5 2.1 22 30-51 2-23 (43)
71 3ka2_A [L-Ala51;Gly51']HIV-1 p 47.8 15 0.00051 33.2 3.9 30 89-120 8-37 (203)
72 2rsp_A RSV protease; hydrolase 46.8 18 0.00062 29.9 4.0 24 96-121 27-50 (124)
73 1tzs_P Activation peptide from 46.5 9.2 0.00032 23.3 1.7 23 29-51 2-24 (35)
74 3vdj_A Circumsporozoite (CS) p 44.2 16 0.00054 27.6 2.8 30 405-434 5-34 (77)
75 3s64_A AC-SLP-1, saposin-like 40.0 4.5 0.00015 31.4 -0.7 52 305-356 35-87 (87)
76 3dex_A SAV_2001; alpha-beta pr 39.1 8.5 0.00029 31.1 0.7 45 383-434 15-62 (107)
77 2oka_A Hypothetical protein; P 36.0 11 0.00039 30.2 1.0 45 383-434 8-55 (104)
78 2npb_A Selenoprotein W; struct 35.3 19 0.00064 28.4 2.2 43 385-434 7-53 (96)
79 2ojl_A Hypothetical protein; B 34.6 19 0.00065 29.1 2.1 45 383-434 11-58 (108)
80 2p0g_A Selenoprotein W-related 34.4 12 0.00042 30.0 1.0 43 385-434 8-53 (105)
81 2fa8_A Hypothetical protein AT 32.4 21 0.00073 28.6 2.1 45 383-434 10-57 (105)
82 1bxo_A Protein (penicillopepsi 28.3 41 0.0014 32.2 3.9 43 255-307 3-45 (323)
83 2w50_A ArMet-like protein 1; M 27.2 61 0.0021 25.7 3.9 36 387-422 5-43 (102)
84 1ibq_A Aspergillopepsin; aspar 26.5 45 0.0015 32.0 3.8 42 256-307 3-44 (325)
85 1izd_A Aspartic proteinase; su 25.7 49 0.0017 31.7 3.9 42 256-307 4-45 (323)
86 3ka2_A [L-Ala51;Gly51']HIV-1 p 25.1 58 0.002 29.3 3.9 30 90-121 113-142 (203)
87 1mpp_A Pepsin; hydrolase(acid 23.9 81 0.0028 30.6 5.1 44 255-306 4-49 (361)
88 1b5f_A Protein (cardosin A); h 23.6 82 0.0028 28.6 4.8 39 79-119 181-227 (239)
No 1
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=6.2e-80 Score=651.76 Aligned_cols=453 Identities=74% Similarity=1.274 Sum_probs=377.8
Q ss_pred EEEeeeecCCChhhhhhhcchhhhhHHHHhhhhccCCCCCCCCCCCcceeeeeecCCceEEEEEEEcCCCceEEEEEeCC
Q 011190 31 VRIGLKKMKLDPNNRLAARLESEHGEALRASVKKYGFPNNLRDSEDTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTG 110 (491)
Q Consensus 31 ~~ipl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTG 110 (491)
+||||+|++..++.+.+.+......+.+ .+++. ..++..+...+||.|+.+.+|+++|+||||||++.|+||||
T Consensus 1 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTG 74 (478)
T 1qdm_A 1 VRIALKKRPIDRNSRVATGLSGGEEQPL---LSGAN---PLRSEEEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTG 74 (478)
T ss_dssp CEEEEEECCCCHHHHHHHHTC----------------------CCSSCSGGGCCGGGCCEEEEEEETTTTEEEEEEEETT
T ss_pred CeeeeeeccchHHHHHhcchhhhhHHHH---Hhhcc---cccCcCCCceEEeEeccCCEEEEEEEECCCCeEEEEEEcCC
Confidence 4899999999998887765432211101 11111 01122245669999999999999999999999999999999
Q ss_pred CCceeeeCCCCCCCccccCCCCCCCCCCCcceecCceEEEEecCceEEEEEEEEEEEECcEeecccEEEEEEecCCcccc
Q 011190 111 SSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFM 190 (491)
Q Consensus 111 Ss~lWV~~~~C~~~~~C~~~~~f~p~~SsT~~~~~~~~~~~Yg~gs~~G~~~~D~v~ig~~~i~~~~fg~~~~~~~~~~~ 190 (491)
|+++||++..|..+..|..|+.|+|++|+||+..++.|.+.|++|+++|.+++|+|++|+..++++.||++....+..|.
T Consensus 75 Ss~lWV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~f~ 154 (478)
T 1qdm_A 75 SSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFL 154 (478)
T ss_dssp CCCCEEEBTTCCSCGGGGGSCCBCGGGCTTCBCCCCEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCBSHHH
T ss_pred CcceEEecCCCCCCccccCCCCCCcccCCCeeeCCcEEEEEcCCCCeEEEEEEEEEEECCeEECCEEEEEEEecCCcccc
Confidence 99999999999645689999999999999999999999999999999999999999999999999999999987665566
Q ss_pred cccccccccCccccccCCCCcchHHHHHHcCCCCCCeEEEEeCCCCCCCCCeeEEECccCCCCCccceeEEeecccceeE
Q 011190 191 VAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQ 270 (491)
Q Consensus 191 ~~~~~GIlGLg~~~~s~~~~~~~~~~L~~~g~i~~~~FSl~l~~~~~~~~~G~L~fGgiD~~~~~G~l~~~pv~~~~~w~ 270 (491)
...++||||||++..+.....|++++|++||+|++++||+||.+..+....|+|+|||+|+++|.|++.|+|+...++|.
T Consensus 155 ~~~~dGIlGLg~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~~~w~ 234 (478)
T 1qdm_A 155 VAKFDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYWQ 234 (478)
T ss_dssp HCSSSEEEECSCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEETTEE
T ss_pred cccccceecccccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCCCeEE
Confidence 67789999999998887777889999999999999999999988643334899999999999999999999999889999
Q ss_pred EEEeeEEECCeeceeecCCceEEEcCCCCcccccHHHHHHHHHHhCCCceeecccchhhhccchhhhhhhhhccCccccc
Q 011190 271 FNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAIGASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKIC 350 (491)
Q Consensus 271 v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l~a~~~~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~ 350 (491)
|.+++|.|+++.+.++..+..+||||||+++++|.+++++|.+++++.+.++.+|+..+.+||+.++++++++++|+.+|
T Consensus 235 v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC 314 (478)
T 1qdm_A 235 FDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKIC 314 (478)
T ss_dssp EEECCEEETTEECSTTTTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHH
T ss_pred EEEeEEEECCEEEeecCCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhh
Confidence 99999999999876666778999999999999999999999999999998999999999999999999999999999999
Q ss_pred ccCcccccCCCccccccccccccccCccccCccCcccchhhHHHHHHHHHHhhhchhHHHHHHHHHhhhccCCCCCCcee
Q 011190 351 SQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMGESA 430 (491)
Q Consensus 351 ~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 430 (491)
+.+|+|..+++...++...+++++++++++...++..|.+|||++.|++++|.+|.|+|+|+++++++|.++|...|.|.
T Consensus 315 ~~iglC~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~ 394 (478)
T 1qdm_A 315 SQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESA 394 (478)
T ss_dssp HHTTCC---------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCE
T ss_pred ccccccccCccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEE
Confidence 99999999999888899999999998888889999999999999999999999999999999999999999999999999
Q ss_pred ecCcCCCCCCcEEEEECCEEEeeCcCccEEEeCCCCcceeeeceeeccCCCCCCCeeEE
Q 011190 431 VDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRGPLWYS 489 (491)
Q Consensus 431 ~~C~~~~~~p~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~ 489 (491)
++|+.++.+|.|+|+|+|+.|+|+|++|+++.++++...|+++|+++|+|++.++.||-
T Consensus 395 v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~IL 453 (478)
T 1qdm_A 395 VDCGSLGSMPDIEFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWIL 453 (478)
T ss_dssp ECGGGGTTCCCEEEEETTEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEE
T ss_pred eecccccccccEEEEECCEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEE
Confidence 99999999999999999999999999999998765457899999999999888999984
No 2
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=5.5e-63 Score=507.54 Aligned_cols=343 Identities=42% Similarity=0.777 Sum_probs=301.4
Q ss_pred eEEEeeeecCCChhhhhhhcchhhhhHHHHhhhhccCCCCCCCCC--CCcceeeeeecCCceEEEEEEEcCCCceEEEEE
Q 011190 30 LVRIGLKKMKLDPNNRLAARLESEHGEALRASVKKYGFPNNLRDS--EDTDIVALKNYMDAQYYGEIGIGTPPQKFTVIF 107 (491)
Q Consensus 30 ~~~ipl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~l 107 (491)
++||||+|.++.|+.+++++..++ +|+ .|+++++.++... .....+||.|+.|.+|+++|+||||||++.|++
T Consensus 1 ~~~ipl~~~~s~r~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~ 75 (370)
T 3psg_A 1 LVKVPLVRKKSLRQNLIKDGKLKD---FLK--THKHNPASKYFPEAAALIGDEPLENYLDTEYFGTIGIGTPAQDFTVIF 75 (370)
T ss_dssp CEEEEEEECCCHHHHHHHTTCHHH---HHH--HCCCCGGGGTCTTSCCSSCCCTTGGGTTCCEEEEEEETTTTEEEEEEE
T ss_pred CEEEEeEEcCcHHHHHHhcCcHHH---HHh--hhhcchhhhhccccccccceecceeccCCEEEEEEEEcCCCCEEEEEE
Confidence 479999999999999998887655 443 3344433222111 135678999999999999999999999999999
Q ss_pred eCCCCceeeeCCCCCCCccccCCCCCCCCCCCcceecCceEEEEecCceEEEEEEEEEEEECcEeecccEEEEEEecCCc
Q 011190 108 DTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGV 187 (491)
Q Consensus 108 DTGSs~lWV~~~~C~~~~~C~~~~~f~p~~SsT~~~~~~~~~~~Yg~gs~~G~~~~D~v~ig~~~i~~~~fg~~~~~~~~ 187 (491)
||||+++||++..|. +..|..|+.|+|++|+||+..++.|.+.|++|+++|.+++|+|++|+..++++.||++....+.
T Consensus 76 DTGSs~lWV~s~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~ 154 (370)
T 3psg_A 76 DTGSSNLWVPSVYCS-SLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGS 154 (370)
T ss_dssp ETTCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCG
T ss_pred eCCCCccEEECCCCC-CcccCCCCCCCCccCcCcEECCcEEEEEeCCceEEEEEEEEEEeeCCcccCCeEEEEEEeeccc
Confidence 999999999999996 6789999999999999999999999999999999999999999999999999999999988766
Q ss_pred ccccccccccccCccccccCCCCcchHHHHHHcCCCCCCeEEEEeCCCCCCCCCeeEEECccCCCCCccceeEEeecccc
Q 011190 188 TFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKG 267 (491)
Q Consensus 188 ~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~~g~i~~~~FSl~l~~~~~~~~~G~L~fGgiD~~~~~G~l~~~pv~~~~ 267 (491)
.|....++||||||++..+.....+++++|++||+|++++||+||.+.. ..+|+|+|||+|+++|.|+++|+|+.+.+
T Consensus 155 ~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~--~~~G~l~fGg~D~~~y~g~l~~~pv~~~~ 232 (370)
T 3psg_A 155 FLYYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSND--DSGSVVLLGGIDSSYYTGSLNWVPVSVEG 232 (370)
T ss_dssp GGGGCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-------CEEEEETCCCGGGBSSCCEEEECSEET
T ss_pred ccccCCccceeccCCccccccCCCCHHHHHHHCCCCCCCEEEEEEccCC--CCCeEEEEEeeChHhcCCcceeecccccc
Confidence 6777788999999999988777889999999999999999999999862 24899999999999999999999999999
Q ss_pred eeEEEEeeEEECCeeceeecCCceEEEcCCCCcccccHHHHHHHHHHhCCCceeecccchhhhccchhhhhhhhhccCcc
Q 011190 268 YWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAIGASGVVSQQCKAVVEQYGQTILDLLLFEAHPK 347 (491)
Q Consensus 268 ~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l~a~~~~~~~C~~~~~~~g~~~i~~~~~~~~~~ 347 (491)
+|.|.+++|.|+++.+. +..++.|+|||||+++++|.+++++|.+++++.
T Consensus 233 ~w~v~l~~i~v~g~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~----------------------------- 282 (370)
T 3psg_A 233 YWQITLDSITMDGETIA-CSGGCQAIVDTGTSLLTGPTSAIANIQSDIGAS----------------------------- 282 (370)
T ss_dssp TEEEEECEEESSSSEEE-CTTCEEEEECTTCCSEEEEHHHHHHHHHHTTCE-----------------------------
T ss_pred eeEEEEeEEEECCEEEe-cCCCceEEEcCCCCcEECCHHHHHHHHHHhCCc-----------------------------
Confidence 99999999999998764 557889999999999999999999999999876
Q ss_pred cccccCcccccCCCccccccccccccccCccccCccCcccchhhHHHHHHHHHHhhhchhHHHHHHHHHhhhccCCCCCC
Q 011190 348 KICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMG 427 (491)
Q Consensus 348 ~~~~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 427 (491)
+...|
T Consensus 283 ---------------------------------------------------------------------------~~~~g 287 (370)
T 3psg_A 283 ---------------------------------------------------------------------------ENSDG 287 (370)
T ss_dssp ---------------------------------------------------------------------------ECTTC
T ss_pred ---------------------------------------------------------------------------ccCCC
Confidence 23467
Q ss_pred ceeecCcCCCCCCcEEEEECCEEEeeCcCccEEEeCCCCcceeeeceeeccCCCCCCCeeEE
Q 011190 428 ESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRGPLWYS 489 (491)
Q Consensus 428 ~~~~~C~~~~~~p~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~ 489 (491)
.|.++|+.+.++|+|+|+|+|++|+|++++|+++ . + ..|+++|++++.|++.|+.||-
T Consensus 288 ~~~v~C~~~~~lP~i~f~~~g~~~~l~~~~yi~~-~-~--~~C~~~~~~~~~~~~~~~~~IL 345 (370)
T 3psg_A 288 EMVISCSSIDSLPDIVFTIDGVQYPLSPSAYILQ-D-D--DSCTSGFEGMDVPTSSGELWIL 345 (370)
T ss_dssp CEECCGGGGGGCCCEEEEETTEEEEECHHHHEEE-C-S--SCEEESEEEECCCTTSCCEEEE
T ss_pred cEEEECCCcccCCcEEEEECCEEEEECHHHhccc-C-C--CEEEEEEEeCCCCCCCCCcEEe
Confidence 8999999999999999999999999999999998 2 2 4699999999998878888983
No 3
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=3.5e-62 Score=502.96 Aligned_cols=348 Identities=39% Similarity=0.767 Sum_probs=277.5
Q ss_pred ceEEEeeeecCCChhhhhhhcc-hhhhhHHHHhhhhccCCCCCCCCCCCcceeeeeecCCceEEEEEEEcCCCceEEEEE
Q 011190 29 GLVRIGLKKMKLDPNNRLAARL-ESEHGEALRASVKKYGFPNNLRDSEDTDIVALKNYMDAQYYGEIGIGTPPQKFTVIF 107 (491)
Q Consensus 29 ~~~~ipl~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~l 107 (491)
.++||||+|+++.++.+++.+. ..+ .++ .+.+..+. .........+||.|+.+.+|+++|+||||||+|.|+|
T Consensus 7 ~~~~i~l~k~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~-~~~~~~~~~~~l~n~~~~~Y~~~I~IGTP~Q~f~vi~ 80 (383)
T 2x0b_A 7 TFKRIFLKRMPSIRESLKERGVDMAR---LGP--EWSQPMKR-LTLGNTTSSVILTNYMDTQYYGEIGIGTPPQTFKVVF 80 (383)
T ss_dssp --------------------------------------------------CEEEEEEETTTEEEEEEEETTTTEEEEEEE
T ss_pred cEEEEEEEECCcHHHHHHHhCchHHH---HHH--hhcccccc-ccccCCcceEeeeecCCCEEEEEEEECCCCcEEEEEE
Confidence 4789999999988888777664 222 221 11110000 0000134569999999999999999999999999999
Q ss_pred eCCCCceeeeCCCCCC-CccccCCCCCCCCCCCcceecCceEEEEecCceEEEEEEEEEEEECcEeecccEEEEEEecCC
Q 011190 108 DTGSSNLWVPSTNCYF-SVACYFHSKYKSSQSSTYKKNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPG 186 (491)
Q Consensus 108 DTGSs~lWV~~~~C~~-~~~C~~~~~f~p~~SsT~~~~~~~~~~~Yg~gs~~G~~~~D~v~ig~~~i~~~~fg~~~~~~~ 186 (491)
||||+++||++..|.. ...|..|+.|+|++|+||+..++.|.+.|++|+++|.+++|+|++|+..++ +.||++...++
T Consensus 81 DTGSs~lWV~s~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~g 159 (383)
T 2x0b_A 81 DTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITVT-QMFGEVTEMPA 159 (383)
T ss_dssp ETTCCCEEEEBTTSCTTSHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEEEEEEEEEEEETTEEEE-EEEEEEEECCH
T ss_pred eCCCCCeEEeccCCCCCcccccCCCCCCCCCCCcEEECCcEEEEEcCCccEEEEEEeeEEEEcCceEE-EEEEEEEecCC
Confidence 9999999999999962 358999999999999999999999999999999999999999999999999 99999998766
Q ss_pred cccccccccccccCccccccCCCCcchHHHHHHcCCCCCCeEEEEeCCCCCCC--CCeeEEECccCCCCCccceeEEeec
Q 011190 187 VTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQED--EGGEIVFGGVDPNHYKGKHTYVPVT 264 (491)
Q Consensus 187 ~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~~g~i~~~~FSl~l~~~~~~~--~~G~L~fGgiD~~~~~G~l~~~pv~ 264 (491)
..|....++||||||++..+.....|++++|++||+|++++||+||.+..+.. .+|+|+|||+|+++|.|+++|+|+.
T Consensus 160 ~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~ 239 (383)
T 2x0b_A 160 LPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI 239 (383)
T ss_dssp HHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBS
T ss_pred cccccCCCceEeccCCCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcC
Confidence 55666788999999999988777889999999999999999999999864321 3799999999999999999999999
Q ss_pred ccceeEEEEeeEEECCeeceeecCCceEEEcCCCCcccccHHHHHHHHHHhCCCceeecccchhhhccchhhhhhhhhcc
Q 011190 265 QKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAIGASGVVSQQCKAVVEQYGQTILDLLLFEA 344 (491)
Q Consensus 265 ~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l~a~~~~~~~C~~~~~~~g~~~i~~~~~~~ 344 (491)
+.++|+|.+++|.|+++.+. +..++.||+||||+++++|.+++++|.+++++.
T Consensus 240 ~~~~w~v~l~~i~v~~~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~-------------------------- 292 (383)
T 2x0b_A 240 KTGVWQIQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKLMEALGAK-------------------------- 292 (383)
T ss_dssp STTSCEEEECEEEESSCCCB-STTCEEEEECTTCSSEEECHHHHHHHHHHHTCE--------------------------
T ss_pred CCceEEEEEeEEEeCCceEE-cCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCc--------------------------
Confidence 99999999999999998753 567889999999999999999999999999876
Q ss_pred CcccccccCcccccCCCccccccccccccccCccccCccCcccchhhHHHHHHHHHHhhhchhHHHHHHHHHhhhccCCC
Q 011190 345 HPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPS 424 (491)
Q Consensus 345 ~~~~~~~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (491)
+
T Consensus 293 ------------------------------------------------------------------------------~- 293 (383)
T 2x0b_A 293 ------------------------------------------------------------------------------K- 293 (383)
T ss_dssp ------------------------------------------------------------------------------E-
T ss_pred ------------------------------------------------------------------------------c-
Confidence 2
Q ss_pred CCCceeecCcCCCCCCcEEEEECCEEEeeCcCccEEEeCCCCcceeeeceeeccCCCCCCCeeEE
Q 011190 425 PMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRGPLWYS 489 (491)
Q Consensus 425 ~~g~~~~~C~~~~~~p~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~ 489 (491)
..|.|.++|+.++.+|+|+|+|+|++|+|+|++|+++..+.+...|+++|+++|+|++.++.||-
T Consensus 294 ~~g~~~v~C~~~~~~P~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~IL 358 (383)
T 2x0b_A 294 RLFDYVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWAL 358 (383)
T ss_dssp CSSCEEEEGGGTTTCCCEEEEETTEEEEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEE
T ss_pred cCCcEEEeccccccCceEEEEECCEEEEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEE
Confidence 35779999999999999999999999999999999987654456899999999998878889983
No 4
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.2e-56 Score=455.76 Aligned_cols=305 Identities=49% Similarity=0.899 Sum_probs=270.8
Q ss_pred cceeeeeecCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCccccCCCCCCCCCCCcceecCceEEEEecCce
Q 011190 77 TDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGA 156 (491)
Q Consensus 77 ~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C~~~~~C~~~~~f~p~~SsT~~~~~~~~~~~Yg~gs 156 (491)
...+||.|+.+.+|+++|+||||+|++.|++||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|+
T Consensus 12 ~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs 90 (351)
T 1tzs_A 12 SAKEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCT-SPACKTHSRFQPSQSSTYSQPGQSFSIQYGTGS 90 (351)
T ss_dssp --CCTTGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCBCCSCEEEEESSSCE
T ss_pred ccceeceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-ccccCCCCcCCcccCcceEECCCEEEEEeCCCC
Confidence 3457899988999999999999999999999999999999999996 568999999999999999999999999999999
Q ss_pred EEEEEEEEEEEECcEeecccEEEEEEecCCcccccccccccccCccccccCCCCcchHHHHHHcCCCCCCeEEEEeCCCC
Q 011190 157 IAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQ 236 (491)
Q Consensus 157 ~~G~~~~D~v~ig~~~i~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~~g~i~~~~FSl~l~~~~ 236 (491)
++|.+++|+|++|+..++++.||++....+..+....++||||||++..+.....+++++|++||+|.+++||+||.+..
T Consensus 91 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~ 170 (351)
T 1tzs_A 91 LSGIIGADQVSVEGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNP 170 (351)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCCC
T ss_pred eEEEEEEeEEEECCeEECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHHHHHHCCCCCCCEEEEEEcCCC
Confidence 99999999999999999999999998876655666678999999999888777788999999999999999999999874
Q ss_pred CCCCCeeEEECccCCCCCccceeEEeecccceeEEEEeeEEECCeeceeecCCceEEEcCCCCcccccHHHHHHHHHHhC
Q 011190 237 QEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAIG 316 (491)
Q Consensus 237 ~~~~~G~L~fGgiD~~~~~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l~ 316 (491)
+....|.|+|||+|+++|.|++.|+|+.+.++|.|.+++|.|+++.+. +..+..++|||||+++++|.+++++|+++++
T Consensus 171 ~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~ 249 (351)
T 1tzs_A 171 EGGAGSELIFGGYDHSHFSGSLNWVPVTKQAYWQIALDNIQVGGTVMF-CSEGCQAIVDTGTSLITGPSDKIKQLQNAIG 249 (351)
T ss_dssp --CTTCEEEETSCCGGGBCSCCEEEECSEETTEEEEEEEEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHHHHHHT
T ss_pred CCCCCCEEEECCCCHHHcCCceEEEecCCCceEEEEeCEEEECCceEE-cCCCceEEeccCCcceeCCHHHHHHHHHHhC
Confidence 333479999999999999999999999988999999999999998753 4567899999999999999999999999997
Q ss_pred CCceeecccchhhhccchhhhhhhhhccCcccccccCcccccCCCccccccccccccccCccccCccCcccchhhHHHHH
Q 011190 317 ASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAVV 396 (491)
Q Consensus 317 a~~~~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (491)
+.
T Consensus 250 ~~------------------------------------------------------------------------------ 251 (351)
T 1tzs_A 250 AA------------------------------------------------------------------------------ 251 (351)
T ss_dssp CE------------------------------------------------------------------------------
T ss_pred Cc------------------------------------------------------------------------------
Confidence 76
Q ss_pred HHHHHhhhchhHHHHHHHHHhhhccCCCCCCceeecCcCCCCCCcEEEEECCEEEeeCcCccEEEeCCCCcceeeeceee
Q 011190 397 WMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTA 476 (491)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~C~~~~~~p~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~ 476 (491)
+.. |.|.++|+.++.+|.|+|+|+|++++|+|++|+++....+...|+++|++
T Consensus 252 --------------------------~~~-g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~yi~~~~~~~~~~C~~~~~~ 304 (351)
T 1tzs_A 252 --------------------------PVD-GEYAVECANLNVMPDVTFTINGVPYTLSPTAYTLLDFVDGMQFCSSGFQG 304 (351)
T ss_dssp --------------------------ECS-SSEEECGGGGGGSCCEEEEETTEEEEECTTTSEECC-----CCEEESEEE
T ss_pred --------------------------ccC-CeEEEeCCCCccCCcEEEEECCEEEEECHHHhEeeccCCCCCeEEEEEEE
Confidence 122 67899999888899999999999999999999998764444689999999
Q ss_pred ccCCCCCCCeeE
Q 011190 477 MDVPPPRGPLWY 488 (491)
Q Consensus 477 ~~~~~~~~~~~~ 488 (491)
.+.|.+.++.||
T Consensus 305 ~~~~~~~~~~~i 316 (351)
T 1tzs_A 305 LDIHPPAGPLWI 316 (351)
T ss_dssp CCCCTTTCSCEE
T ss_pred CCCCCCCCCeEE
Confidence 998766677887
No 5
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=1.6e-55 Score=445.57 Aligned_cols=301 Identities=45% Similarity=0.860 Sum_probs=270.6
Q ss_pred ceeeeeecCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCccccCCCCCCCCCCCcceecCceEEEEecCceE
Q 011190 78 DIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGAI 157 (491)
Q Consensus 78 ~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C~~~~~C~~~~~f~p~~SsT~~~~~~~~~~~Yg~gs~ 157 (491)
..+||.|+.+.+|+++|+||||+|++.|++||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|++
T Consensus 3 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~ 81 (329)
T 1dpj_A 3 HDVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECG-SLACFLHSKYDHEASSSYKANGTEFAIQYGTGSL 81 (329)
T ss_dssp EEEECEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEE
T ss_pred cceeeeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCC-CcccCCcCcCCcccCcCeEECCcEEEEEECCceE
Confidence 458999999999999999999999999999999999999999996 4579989999999999999999999999999999
Q ss_pred EEEEEEEEEEECcEeecccEEEEEEecCCcccccccccccccCccccccCCCCcchHHHHHHcCCCCCCeEEEEeCCCCC
Q 011190 158 AGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQ 237 (491)
Q Consensus 158 ~G~~~~D~v~ig~~~i~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~~g~i~~~~FSl~l~~~~~ 237 (491)
+|.+++|+|++|+..++++.||+++...+..|....++||||||++..+.....+++++|++||+|++++||+||.+...
T Consensus 82 ~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~ 161 (329)
T 1dpj_A 82 EGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSK 161 (329)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGG
T ss_pred EEEEEEEEEEECCeEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCC
Confidence 99999999999999999999999998755345556789999999998877677889999999999999999999987531
Q ss_pred -CCCCeeEEECccCCCCCccceeEEeecccceeEEEEeeEEECCeeceeecCCceEEEcCCCCcccccHHHHHHHHHHhC
Q 011190 238 -EDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAIG 316 (491)
Q Consensus 238 -~~~~G~L~fGgiD~~~~~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l~ 316 (491)
....|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|.|+++.+. ..+..++|||||+++++|.+++++|+++++
T Consensus 162 ~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~ 239 (329)
T 1dpj_A 162 DTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAE--LESHGAAIDTGTSLITLPSGLAEMINAEIG 239 (329)
T ss_dssp TCSSSEEEEESSCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE--CSSCEEEECTTCSCEEECHHHHHHHHHHHT
T ss_pred CCCCCcEEEEcCCChhhcCCceEEEEcCCCceEEEEeeeEEECCeEec--CCCccEEeeCCCCcEECCHHHHHHHHHHhC
Confidence 22479999999999999999999999989999999999999998764 356789999999999999999999999997
Q ss_pred CCceeecccchhhhccchhhhhhhhhccCcccccccCcccccCCCccccccccccccccCccccCccCcccchhhHHHHH
Q 011190 317 ASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAVV 396 (491)
Q Consensus 317 a~~~~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (491)
+.
T Consensus 240 ~~------------------------------------------------------------------------------ 241 (329)
T 1dpj_A 240 AK------------------------------------------------------------------------------ 241 (329)
T ss_dssp CE------------------------------------------------------------------------------
T ss_pred Cc------------------------------------------------------------------------------
Confidence 65
Q ss_pred HHHHHhhhchhHHHHHHHHHhhhccCCCCCCceeecCcCCCCCCcEEEEECCEEEeeCcCccEEEeCCCCcceeeeceee
Q 011190 397 WMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTA 476 (491)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~C~~~~~~p~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~ 476 (491)
....|.|.++|+....+|.|+|+|+|++++|+|++|+++.+ ..|+++|++
T Consensus 242 --------------------------~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~----~~C~~~~~~ 291 (329)
T 1dpj_A 242 --------------------------KGWTGQYTLDCNTRDNLPDLIFNFNGYNFTIGPYDYTLEVS----GSCISAITP 291 (329)
T ss_dssp --------------------------ECTTSSEEECGGGGGGCCCEEEEETTEEEEECTTTSEEEET----TEEEECEEE
T ss_pred --------------------------cCCCCeEEEECCCCCcCCcEEEEECCEEEEECHHHhEecCC----CEEEEEEEe
Confidence 12367899999988899999999999999999999999865 579999999
Q ss_pred ccCCCCCCCeeEE
Q 011190 477 MDVPPPRGPLWYS 489 (491)
Q Consensus 477 ~~~~~~~~~~~~~ 489 (491)
++.|.+.++.||-
T Consensus 292 ~~~~~~~~~~~iL 304 (329)
T 1dpj_A 292 MDFPEPVGPLAIV 304 (329)
T ss_dssp CCCCTTTCSEEEE
T ss_pred cccCCCCCCcEEE
Confidence 9987667788873
No 6
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=7e-56 Score=450.18 Aligned_cols=306 Identities=43% Similarity=0.880 Sum_probs=274.7
Q ss_pred CcceeeeeecCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCC-CccccCCCCCCCCCCCcceecCceEEEEecC
Q 011190 76 DTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYF-SVACYFHSKYKSSQSSTYKKNGESASIQYGT 154 (491)
Q Consensus 76 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C~~-~~~C~~~~~f~p~~SsT~~~~~~~~~~~Yg~ 154 (491)
+...+||.|+.|.+|+++|+||||||++.|++||||+++||++..|.. ...|..++.|+|++|+||+..++.|.+.|++
T Consensus 6 ~~~~~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~ 85 (341)
T 3k1w_A 6 TTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYST 85 (341)
T ss_dssp BCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEEETT
T ss_pred CCccccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCCCCCCCCcCcCeeECCCEEEEEECC
Confidence 566799999999999999999999999999999999999999999962 3479889999999999999999999999999
Q ss_pred ceEEEEEEEEEEEECcEeecccEEEEEEecCCcccccccccccccCccccccCCCCcchHHHHHHcCCCCCCeEEEEeCC
Q 011190 155 GAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNR 234 (491)
Q Consensus 155 gs~~G~~~~D~v~ig~~~i~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~~g~i~~~~FSl~l~~ 234 (491)
|+++|.+++|+|++|+..+ ++.||++.......+....++||||||++..+.....+++++|++||+|++++||+||.+
T Consensus 86 gs~~G~~~~D~v~ig~~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~ 164 (341)
T 3k1w_A 86 GTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNR 164 (341)
T ss_dssp EEEEEEEEEEEEEETTEEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHHHTCBSSSEEEEEECC
T ss_pred cEEEEEEEEEEEEECCcee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCCHHHHHHHCCCCCCCEEEEEEeC
Confidence 9999999999999999999 999999998765445566789999999998887777889999999999999999999998
Q ss_pred CC--CCCCCeeEEECccCCCCCccceeEEeecccceeEEEEeeEEECCeeceeecCCceEEEcCCCCcccccHHHHHHHH
Q 011190 235 NQ--QEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMIN 312 (491)
Q Consensus 235 ~~--~~~~~G~L~fGgiD~~~~~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~ 312 (491)
.. +....|.|+|||+|+++|.|+++|+|+.+.++|.|.+++|.|+++.+. +.....++|||||+++++|.+++++|+
T Consensus 165 ~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i~ 243 (341)
T 3k1w_A 165 DSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKLM 243 (341)
T ss_dssp CC-----CCEEEEESSCCGGGEEEEEEEEECSSTTSCEEEECCEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHHH
T ss_pred CCCcCCCCCCEEEECccChHHccCceEEEecCCCCEEEEEEeEEEECCEEee-cCCCCEEEEECCCChhcCCHHHHHHHH
Confidence 64 223479999999999999999999999999999999999999998753 456789999999999999999999999
Q ss_pred HHhCCCceeecccchhhhccchhhhhhhhhccCcccccccCcccccCCCccccccccccccccCccccCccCcccchhhH
Q 011190 313 HAIGASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACE 392 (491)
Q Consensus 313 ~~l~a~~~~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (491)
+++++.
T Consensus 244 ~~~~~~-------------------------------------------------------------------------- 249 (341)
T 3k1w_A 244 EALGAK-------------------------------------------------------------------------- 249 (341)
T ss_dssp HHHTCE--------------------------------------------------------------------------
T ss_pred HHcCCe--------------------------------------------------------------------------
Confidence 999876
Q ss_pred HHHHHHHHHhhhchhHHHHHHHHHhhhccCCCCCCceeecCcCCCCCCcEEEEECCEEEeeCcCccEEEeCCCCcceeee
Q 011190 393 MAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCIS 472 (491)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~C~~~~~~p~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~ 472 (491)
....| |.++|+....+|.|+|+|+|++++|+|++|+++....+...|++
T Consensus 250 ------------------------------~~~~g-~~~~C~~~~~~p~i~f~f~g~~~~l~~~~~~~~~~~~~~~~C~~ 298 (341)
T 3k1w_A 250 ------------------------------KRLFD-YVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTL 298 (341)
T ss_dssp ------------------------------ECSSC-EEEEGGGGGGCCCEEEEETTEEEEECHHHHBCCSCCCTTSEEEB
T ss_pred ------------------------------ecCCC-eEEeCCCCCcCCcEEEEECCEEEEECHHHheeEccCCCCCeEEe
Confidence 11246 99999988899999999999999999999999876544578999
Q ss_pred ceeeccCCCCCCCeeE
Q 011190 473 GFTAMDVPPPRGPLWY 488 (491)
Q Consensus 473 ~~~~~~~~~~~~~~~~ 488 (491)
+|+++|.|...++.||
T Consensus 299 ~i~~~~~~~~~~~~~i 314 (341)
T 3k1w_A 299 AIHAMDIPPPTGPTWA 314 (341)
T ss_dssp SEEECCCCTTTCSCEE
T ss_pred EEEecccCCCCCCeEE
Confidence 9999998877778887
No 7
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=1.5e-55 Score=444.53 Aligned_cols=296 Identities=43% Similarity=0.828 Sum_probs=266.0
Q ss_pred CcceeeeeecCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCccccCCCCCCCCCCCcceecCceEEEEecCc
Q 011190 76 DTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTG 155 (491)
Q Consensus 76 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C~~~~~C~~~~~f~p~~SsT~~~~~~~~~~~Yg~g 155 (491)
+...+||.|+.+.+|+++|+||||||++.|++||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|
T Consensus 2 ~~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 80 (323)
T 3cms_A 2 EVASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIHYGTG 80 (323)
T ss_dssp CCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTE
T ss_pred CcceeeeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCC-cccccCCCCCCCccCCCeEECCcEEEEEeCCC
Confidence 45668999999999999999999999999999999999999999995 56899999999999999999999999999999
Q ss_pred eEEEEEEEEEEEECcEeecccEEEEEEecCCcccccccccccccCccccccCCCCcchHHHHHHcCCCCCCeEEEEeCCC
Q 011190 156 AIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRN 235 (491)
Q Consensus 156 s~~G~~~~D~v~ig~~~i~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~~g~i~~~~FSl~l~~~ 235 (491)
+++|.+++|+|++|+..++++.||++....+..|....++||||||++..+.....+++++|++||.|.+++||+||.+.
T Consensus 81 s~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~ 160 (323)
T 3cms_A 81 SMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRN 160 (323)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCTT
T ss_pred CeEEEEEEEEEEECCeEEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHHHHHHHCCCCCCCEEEEEECCC
Confidence 99999999999999999999999999987654455567899999999998877888999999999999999999999886
Q ss_pred CCCCCCeeEEECccCCCCCccceeEEeecccceeEEEEeeEEECCeeceeecCCceEEEcCCCCcccccHHHHHHHHHHh
Q 011190 236 QQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAI 315 (491)
Q Consensus 236 ~~~~~~G~L~fGgiD~~~~~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l 315 (491)
.. .|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|.|+++.+. +..+..++|||||+++++|.+++++|.+++
T Consensus 161 ~~---~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~ 236 (323)
T 3cms_A 161 GQ---ESMLTLGAIDPSYYTGSLHWVPVTVQQYWQFTVDSVTISGVVVA-CEGGCQAILDTGTSKLVGPSSDILNIQQAI 236 (323)
T ss_dssp SS---CEEEEESCCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE-STTCEEEEECTTCCSEEECHHHHHHHHHHH
T ss_pred CC---CEEEEECCCChhhccCceEEEECccCCeEEEEEeeEEECCEEee-cCCCcEEEEecCCccEeCCHHHHHHHHHHh
Confidence 32 39999999999999999999999988999999999999998764 346789999999999999999999999999
Q ss_pred CCCceeecccchhhhccchhhhhhhhhccCcccccccCcccccCCCccccccccccccccCccccCccCcccchhhHHHH
Q 011190 316 GASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAV 395 (491)
Q Consensus 316 ~a~~~~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (491)
++.
T Consensus 237 ~~~----------------------------------------------------------------------------- 239 (323)
T 3cms_A 237 GAT----------------------------------------------------------------------------- 239 (323)
T ss_dssp TCE-----------------------------------------------------------------------------
T ss_pred CCe-----------------------------------------------------------------------------
Confidence 776
Q ss_pred HHHHHHhhhchhHHHHHHHHHhhhccCCCCCCceeecCcCCCCCCcEEEEECCEEEeeCcCccEEEeCCCCcceeeecee
Q 011190 396 VWMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFT 475 (491)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~C~~~~~~p~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~~~~ 475 (491)
+...|.|.++|+..+.+|.|+|+|+|++++|+|++|+++ ....|+++|+
T Consensus 240 ---------------------------~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~----~~~~C~~~i~ 288 (323)
T 3cms_A 240 ---------------------------QNQYGEFDIDCDNLSYMPTVVFEINGKMYPLTPSAYTSQ----DQGFCTSGFQ 288 (323)
T ss_dssp ---------------------------EETTTEEEECTTCTTTSCCEEEEETTEEEEECHHHHEEE----ETTEEEESEE
T ss_pred ---------------------------ecCCCcEEEECCCCccCceEEEEECCEEEEECHHHhccC----CCCEEEEEEE
Confidence 112567899999988999999999999999999999998 2367999999
Q ss_pred eccCCCCCCCeeE
Q 011190 476 AMDVPPPRGPLWY 488 (491)
Q Consensus 476 ~~~~~~~~~~~~~ 488 (491)
+.+ .++.||
T Consensus 289 ~~~----~~~~~i 297 (323)
T 3cms_A 289 SEN----HSQKWI 297 (323)
T ss_dssp EC-------CCEE
T ss_pred eCC----CCCcEE
Confidence 876 345676
No 8
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=3.4e-55 Score=442.17 Aligned_cols=297 Identities=42% Similarity=0.775 Sum_probs=269.0
Q ss_pred eeeeeecCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCccccCCCCCCCCCCCcceecCceEEEEecCceEE
Q 011190 79 IVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGAIA 158 (491)
Q Consensus 79 ~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C~~~~~C~~~~~f~p~~SsT~~~~~~~~~~~Yg~gs~~ 158 (491)
.+||.|+.+.+|+++|+||||||++.|++||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|++.
T Consensus 3 ~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~ 81 (324)
T 1am5_A 3 TEQMKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCS-AQACSNHNKFKPRQSSTYVETGKTVDLTYGTGGMR 81 (324)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEE
T ss_pred eeeeecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-cccccCCCcCCCccCCCeEeCCcEEEEEECCCCeE
Confidence 47999999999999999999999999999999999999999996 56799899999999999999999999999999999
Q ss_pred EEEEEEEEEECcEeecccEEEEEEecCCcccccccccccccCccccccCCCCcchHHHHHHcCCCCCCeEEEEeCCCCCC
Q 011190 159 GFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQE 238 (491)
Q Consensus 159 G~~~~D~v~ig~~~i~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~~g~i~~~~FSl~l~~~~~~ 238 (491)
|.+++|+|++|+..++++.||++....+..+....++||||||++..+.....+++++|++||+|.+++||+||.+...
T Consensus 82 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~- 160 (324)
T 1am5_A 82 GILGQDTVSVGGGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGA- 160 (324)
T ss_dssp EEEEEEEEESSSSCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEECCSTTC-
T ss_pred EEEEECceeECCcEEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHhHHhcCCCCCCEEEEEecCCCC-
Confidence 9999999999999999999999998766555566789999999998887777889999999999999999999988632
Q ss_pred CCCeeEEECccCCCCCccceeEEeecccceeEEEEeeEEECCeeceeecCCceEEEcCCCCcccccHHHHHHHHHHhCCC
Q 011190 239 DEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAIGAS 318 (491)
Q Consensus 239 ~~~G~L~fGgiD~~~~~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l~a~ 318 (491)
..|.|+|||+|+++|.|++.|+|+.+.++|.|.+++|.|+++.+. +.+ ..++|||||+++++|++++++|++++++.
T Consensus 161 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 237 (324)
T 1am5_A 161 -NGSEVMLGGVDNSHYTGSIHWIPVTAEKYWQVALDGITVNGQTAA-CEG-CQAIVDTGTSKIVAPVSALANIMKDIGAS 237 (324)
T ss_dssp -SCEEEEESSCCGGGBCSCCEEEEEEEETTEEEEECEEEETTEECC-CCC-EEEEECTTCSSEEECTTTHHHHHHHHTCE
T ss_pred -CCcEEEECccCHHHcCCceEEEecCCCcEEEEEEeEEEECCceee-ccC-ceEEEecCCccEECCHHHHHHHHHHhCCc
Confidence 379999999999999999999999988999999999999998753 333 89999999999999999999999998654
Q ss_pred ceeecccchhhhccchhhhhhhhhccCcccccccCcccccCCCccccccccccccccCccccCccCcccchhhHHHHHHH
Q 011190 319 GVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAVVWM 398 (491)
Q Consensus 319 ~~~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (491)
.
T Consensus 238 -~------------------------------------------------------------------------------ 238 (324)
T 1am5_A 238 -E------------------------------------------------------------------------------ 238 (324)
T ss_dssp -E------------------------------------------------------------------------------
T ss_pred -c------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHhhhchhHHHHHHHHHhhhccCCCCCCceeecCcCCCCCCcEEEEECCEEEeeCcCccEEEeCCCCcceeeeceeecc
Q 011190 399 QNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMD 478 (491)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~C~~~~~~p~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~ 478 (491)
..|.|.++|+..+.+|+|+|+|+|++++|+|++|+++. ...|+++|++.+
T Consensus 239 --------------------------~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~----~~~C~~~~~~~~ 288 (324)
T 1am5_A 239 --------------------------NQGEMMGNCASVQSLPDITFTINGVKQPLPPSAYIEGD----QAFCTSGLGSSG 288 (324)
T ss_dssp --------------------------CCCCEECCTTSSSSSCCEEEEETTEEEEECHHHHEEES----SSCEEECEEECC
T ss_pred --------------------------cCCcEEEeCCCcccCCcEEEEECCEEEEECHHHhcccC----CCeEEEEEEECc
Confidence 14678899999889999999999999999999999986 267999999999
Q ss_pred CCCCCCCeeEE
Q 011190 479 VPPPRGPLWYS 489 (491)
Q Consensus 479 ~~~~~~~~~~~ 489 (491)
.|.+.++.||-
T Consensus 289 ~~~~~~~~~il 299 (324)
T 1am5_A 289 VPSNTSELWIF 299 (324)
T ss_dssp SCCSSSCEEEE
T ss_pred cCCCCCCcEEE
Confidence 87666778873
No 9
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=2.4e-55 Score=444.26 Aligned_cols=300 Identities=45% Similarity=0.867 Sum_probs=270.0
Q ss_pred eeeeeecCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCccccCCCCCCCCCCCcceecCceEEEEecCceEE
Q 011190 79 IVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGAIA 158 (491)
Q Consensus 79 ~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C~~~~~C~~~~~f~p~~SsT~~~~~~~~~~~Yg~gs~~ 158 (491)
.+||. +.+.+|+++|.||||||++.|++||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|++.
T Consensus 4 ~~~l~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 81 (329)
T 1htr_B 4 YEPMA-YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSLT 81 (329)
T ss_dssp CCGGG-GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEE
T ss_pred eeeeE-EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-CcccCCCCcCCCccCCCeEECCcEEEEEeCCCCeE
Confidence 36888 88999999999999999999999999999999999996 45799899999999999999999999999999999
Q ss_pred EEEEEEEEEECcEeecccEEEEEEecCCcccccccccccccCccccccCCCCcchHHHHHHcCCCCCCeEEEEeCCCCCC
Q 011190 159 GFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQE 238 (491)
Q Consensus 159 G~~~~D~v~ig~~~i~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~~g~i~~~~FSl~l~~~~~~ 238 (491)
|.+++|+|++|+..++++.||++....+..+....++||||||++..+.....+++++|++||+|++++||+||.+....
T Consensus 82 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~ 161 (329)
T 1htr_B 82 GFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQGS 161 (329)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHHTTCSSSSEEEEEECSSCSS
T ss_pred EEEEeeeEEEcceEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHHHhcCCCCCCEEEEEEcCCCCC
Confidence 99999999999999999999999987655565667899999999988877788899999999999999999999886422
Q ss_pred CCCeeEEECccCCCCCccceeEEeecccceeEEEEeeEEECCeeceeecCCceEEEcCCCCcccccHHHHHHHHHHhCCC
Q 011190 239 DEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAIGAS 318 (491)
Q Consensus 239 ~~~G~L~fGgiD~~~~~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l~a~ 318 (491)
..|.|+|||+|+++|.|++.|+|+.+.++|.|.+++|.|+++.+..+.....++|||||+++++|++++++|++++++.
T Consensus 162 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 240 (329)
T 1htr_B 162 -SGGAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQ 240 (329)
T ss_dssp -EEEEEEESSCCGGGEEEEEEEEEBCSSSSCEEEECEEEETTEECCTTTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCE
T ss_pred -CCcEEEEcccCHHHcCCceEEEECCCCceEEEEEeEEEECCceeeecCCCceEEEecCCccEECCHHHHHHHHHHhCCe
Confidence 3799999999999999999999999889999999999999987543456789999999999999999999999999776
Q ss_pred ceeecccchhhhccchhhhhhhhhccCcccccccCcccccCCCccccccccccccccCccccCccCcccchhhHHHHHHH
Q 011190 319 GVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAVVWM 398 (491)
Q Consensus 319 ~~~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (491)
T Consensus 241 -------------------------------------------------------------------------------- 240 (329)
T 1htr_B 241 -------------------------------------------------------------------------------- 240 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhchhHHHHHHHHHhhhccCCCCCCceeecCcCCCCCCcEEEEECCEEEeeCcCccEEEeCCCCcceeeeceeecc
Q 011190 399 QNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMD 478 (491)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~C~~~~~~p~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~ 478 (491)
+...|.|.++|+.+..+|.|+|+|+|++++|+|++|+++.. ..|+++|++.+
T Consensus 241 ------------------------~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~----g~C~~~~~~~~ 292 (329)
T 1htr_B 241 ------------------------EDEYGQFLVNCNSIQNLPSLTFIINGVEFPLPPSSYILSNN----GYCTVGVEPTY 292 (329)
T ss_dssp ------------------------ECTTSCEEECGGGGGGSCCEEEEETTEEEEECHHHHEEECS----SCEEESEEEEC
T ss_pred ------------------------ecCCCeEEEeCCCcccCCcEEEEECCEEEEECHHHhcccCC----CEEEEEEEECC
Confidence 12256789999988899999999999999999999999865 37999999999
Q ss_pred CCCCCCC-eeEE
Q 011190 479 VPPPRGP-LWYS 489 (491)
Q Consensus 479 ~~~~~~~-~~~~ 489 (491)
.+.+.++ .||-
T Consensus 293 ~~~~~~~~~~iL 304 (329)
T 1htr_B 293 LSSQNGQPLWIL 304 (329)
T ss_dssp CCCTTSSCEEEE
T ss_pred CCCCCCCceEEE
Confidence 8776777 8873
No 10
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=3.1e-55 Score=441.65 Aligned_cols=293 Identities=44% Similarity=0.850 Sum_probs=261.0
Q ss_pred eeeeeecCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCccccCCCCCCCCCCCcceecCceEEEEecCceEE
Q 011190 79 IVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGAIA 158 (491)
Q Consensus 79 ~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C~~~~~C~~~~~f~p~~SsT~~~~~~~~~~~Yg~gs~~ 158 (491)
.+||.|+.|.+|+++|+||||||++.|++||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|+++
T Consensus 2 ~~~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 80 (320)
T 4aa9_A 2 REPLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCK-SNVCKNHHRFDPRKSSTFRNLGKPLSIHYGTGSME 80 (320)
T ss_dssp ------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEE
T ss_pred CccceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCC-ccccCCCCCCCCCCCcCeEcCCcEEEEEECCcEEE
Confidence 46899999999999999999999999999999999999999996 66899999999999999999999999999999999
Q ss_pred EEEEEEEEEECcEeecccEEEEEEecCCcccccccccccccCccccccCCCCcchHHHHHHcCCCCCCeEEEEeCCCCCC
Q 011190 159 GFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQE 238 (491)
Q Consensus 159 G~~~~D~v~ig~~~i~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~~g~i~~~~FSl~l~~~~~~ 238 (491)
|.+++|+|++|+..++++.||++....+..+....++||||||++..+.....+++++|++||+|++++||+||.+.
T Consensus 81 G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~--- 157 (320)
T 4aa9_A 81 GFLGYDTVTVSNIVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLVARDLFSVYMDRN--- 157 (320)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCSS---
T ss_pred EEEEEEEEEECCEeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHHHHhCCCCCCceEEEEeCCC---
Confidence 99999999999999999999999987664565667899999999998877788999999999999999999999985
Q ss_pred CCCeeEEECccCCCCCccceeEEeecccceeEEEEeeEEECCeeceeecCCceEEEcCCCCcccccHHHHHHHHHHhCCC
Q 011190 239 DEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAIGAS 318 (491)
Q Consensus 239 ~~~G~L~fGgiD~~~~~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l~a~ 318 (491)
...|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.|+++.+. ......++|||||+++++|.+++++|++++++.
T Consensus 158 ~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~ 236 (320)
T 4aa9_A 158 GQGSMLTLGAIDPSYYTGSLHWVPVTLQQYWQFTVDSVTINGVAVA-CVGGCQAILDTGTSVLFGPSSDILKIQMAIGAT 236 (320)
T ss_dssp SSCCEEEETCCCGGGEEEEEEEEECSSBTTBEEEECEEEETTEEEE-STTCEEEEECTTCSSEEEEHHHHHHHHHHTTCE
T ss_pred CCCeEEEEcccCHHHccCceEEEEcccCCceEEEEeEEEECCEEec-cCCCcEEEEECCCCcEECCHHHHHHHHHHhCCc
Confidence 2379999999999999999999999999999999999999998775 345789999999999999999999999999776
Q ss_pred ceeecccchhhhccchhhhhhhhhccCcccccccCcccccCCCccccccccccccccCccccCccCcccchhhHHHHHHH
Q 011190 319 GVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAVVWM 398 (491)
Q Consensus 319 ~~~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (491)
T Consensus 237 -------------------------------------------------------------------------------- 236 (320)
T 4aa9_A 237 -------------------------------------------------------------------------------- 236 (320)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhchhHHHHHHHHHhhhccCCCCCCceeecCcCCCCCCcEEEEECCEEEeeCcCccEEEeCCCCcceeeeceeecc
Q 011190 399 QNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMD 478 (491)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~C~~~~~~p~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~ 478 (491)
+...|.|.++|+....+|.|+|+|+|++++|+|++|+.+. ...|+++|++..
T Consensus 237 ------------------------~~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~~----~~~C~~~i~~~~ 288 (320)
T 4aa9_A 237 ------------------------ENRYGEFDVNCGNLRSMPTVVFEINGRDYPLSPSAYTSKD----QGFCTSGFQGDN 288 (320)
T ss_dssp ------------------------ECTTSCEEECGGGGGGCCCEEEEETTEEEEECHHHHEEEE----TTEEEESEEEET
T ss_pred ------------------------ccCCCcEEEeCCCCCcCceEEEEECCEEEEECHHHhccCC----CCeEEEEEEcCC
Confidence 1235789999999889999999999999999999999872 267999998832
Q ss_pred CCCCCCCeeE
Q 011190 479 VPPPRGPLWY 488 (491)
Q Consensus 479 ~~~~~~~~~~ 488 (491)
.++.||
T Consensus 289 ----~~~~~i 294 (320)
T 4aa9_A 289 ----NSELWI 294 (320)
T ss_dssp ----TCCCEE
T ss_pred ----CCCcEE
Confidence 346676
No 11
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=1.3e-54 Score=446.08 Aligned_cols=295 Identities=32% Similarity=0.654 Sum_probs=265.4
Q ss_pred CcceeeeeecCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCccccCCCCCCCCCCCcceecCceEEEEecCc
Q 011190 76 DTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTG 155 (491)
Q Consensus 76 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C~~~~~C~~~~~f~p~~SsT~~~~~~~~~~~Yg~g 155 (491)
....+||.|+.+.+|+++|+||||||++.|+|||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|
T Consensus 50 ~~~~~pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 128 (375)
T 1miq_A 50 ENDVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCN-SSGCSIKNLYDSSKSKSYEKDGTKVDITYGSG 128 (375)
T ss_dssp TTBCCCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCC-SSGGGGSCCBCGGGCTTCEEEEEEEEEEETTE
T ss_pred CcceEEcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCC-cccccCCCcCCCccCCceEECCcEEEEEeCCC
Confidence 34558999999999999999999999999999999999999999996 56899999999999999999999999999999
Q ss_pred eEEEEEEEEEEEECcEeecccEEEEEEe----cCCcccccccccccccCccccccCCCCcchHHHHHHcCCCCCCeEEEE
Q 011190 156 AIAGFFSYDSVKVGDLVVKDQEFIEATR----EPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFW 231 (491)
Q Consensus 156 s~~G~~~~D~v~ig~~~i~~~~fg~~~~----~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~~g~i~~~~FSl~ 231 (491)
+++|.+++|+|++|+..+++ .||++.. .+ .|....++||||||++..+.....+++++|++||+|++++||+|
T Consensus 129 s~~G~~~~Dtv~ig~~~v~~-~Fg~~~~~~~~~~--~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~ 205 (375)
T 1miq_A 129 TVKGFFSKDLVTLGHLSMPY-KFIEVTDTDDLEP--IYSSVEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFY 205 (375)
T ss_dssp EEEEEEEEEEEEETTEEEEE-EEEEEEECGGGTT--HHHHSCCCEEEECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEE
T ss_pred eEEEEEEEEEEEEcCceECc-EEEEEEecccccc--ccccCCCceEEeCCCCcccccCCCCHHHHHHhccCcCCCEEEEE
Confidence 99999999999999999999 9999998 43 45556789999999998887778899999999999999999999
Q ss_pred eCCCCCCCCCeeEEECccCCCCCccceeEEeecccceeEEEEeeEEECCeeceeecCCceEEEcCCCCcccccHHHHHHH
Q 011190 232 LNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMI 311 (491)
Q Consensus 232 l~~~~~~~~~G~L~fGgiD~~~~~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l 311 (491)
|.+.+. ..|+|+|||+|+++|.|++.|+|+.+.++|.|.++ |.|+++.+ .+..++|||||+++++|.+++++|
T Consensus 206 L~~~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~-i~v~g~~~----~~~~aiiDSGTs~~~lP~~~~~~l 278 (375)
T 1miq_A 206 LPVHDV--HAGYLTIGGIEEKFYEGNITYEKLNHDLYWQIDLD-VHFGKQTM----EKANVIVDSGTTTITAPSEFLNKF 278 (375)
T ss_dssp CCTTCT--TEEEEEESSCCGGGEEEEEEEEEBSSSSSSEEEEE-EEETTEEE----EEEEEEECTTBSSEEECHHHHHHH
T ss_pred ecCCCC--CCeEEEEcccCHHHcCCceEEEecCCCceEEEEEE-EEECCEEc----ccceEEecCCCccEEcCHHHHHHH
Confidence 998632 48999999999999999999999998999999999 99999876 457899999999999999999999
Q ss_pred HHHhCCCceeecccchhhhccchhhhhhhhhccCcccccccCcccccCCCccccccccccccccCccccCccCcccchhh
Q 011190 312 NHAIGASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSAC 391 (491)
Q Consensus 312 ~~~l~a~~~~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (491)
++++++..
T Consensus 279 ~~~~~~~~------------------------------------------------------------------------ 286 (375)
T 1miq_A 279 FANLNVIK------------------------------------------------------------------------ 286 (375)
T ss_dssp HHHHTCEE------------------------------------------------------------------------
T ss_pred HHHhCCcc------------------------------------------------------------------------
Confidence 99998740
Q ss_pred HHHHHHHHHHhhhchhHHHHHHHHHhhhccCCCCCCceeecCcCCCCCCcEEEEECCEEEeeCcCccEEEeCCCCcceee
Q 011190 392 EMAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCI 471 (491)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~C~~~~~~p~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~ 471 (491)
+...|.|.++|+. ..+|.|+|+|+|++|+|+|++|+++....+...|+
T Consensus 287 -------------------------------~~~~g~~~~~C~~-~~~P~i~f~f~g~~~~l~~~~yi~~~~~~g~~~C~ 334 (375)
T 1miq_A 287 -------------------------------VPFLPFYVTTCDN-KEMPTLEFKSANNTYTLEPEYYMNPILEVDDTLCM 334 (375)
T ss_dssp -------------------------------CTTSSCEEEETTC-TTCCCEEEECSSCEEEECGGGSEEESSSSSCSEEE
T ss_pred -------------------------------cCCCCeEEEECCC-CCCCcEEEEECCEEEEECHHHhEeeccCCCCCeEE
Confidence 2346779999998 78999999999999999999999997644446899
Q ss_pred eceeeccCCCCCCCeeE
Q 011190 472 SGFTAMDVPPPRGPLWY 488 (491)
Q Consensus 472 ~~~~~~~~~~~~~~~~~ 488 (491)
++|++.+.|. +.||
T Consensus 335 ~~~~~~~~~~---~~~I 348 (375)
T 1miq_A 335 ITMLPVDIDS---NTFI 348 (375)
T ss_dssp ESEEECCSSS---SEEE
T ss_pred EEEEECCCCC---CcEE
Confidence 9999988642 5787
No 12
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.2e-54 Score=454.81 Aligned_cols=295 Identities=29% Similarity=0.545 Sum_probs=265.9
Q ss_pred CcceeeeeecCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCccccCCCCCCCCCCCcceecCceEEEEecCc
Q 011190 76 DTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTG 155 (491)
Q Consensus 76 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C~~~~~C~~~~~f~p~~SsT~~~~~~~~~~~Yg~g 155 (491)
....+||.|+.+.+|+++|+||||||++.|++||||+++||++..|. +..|..++.|+|++|+||+..++.|.+.|++|
T Consensus 125 ~~~~~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~-s~~C~~~~~ydps~SsT~~~~~~~f~i~YgdG 203 (451)
T 3qvc_A 125 EFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCT-SESCESKNHYDSSKSKTYEKDDTPVKLTSKAG 203 (451)
T ss_dssp --CCCCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEECSSE
T ss_pred cCCccceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-ccccCCCCCCCCCCCcccccCCCEEEEEECCC
Confidence 55678999999999999999999999999999999999999999996 56899999999999999999999999999999
Q ss_pred eEEEEEEEEEEEECcEeecccEEEEEEe----cCCcccccccccccccCccccccCCCCcchHHHHHHcCCCCCCeEEEE
Q 011190 156 AIAGFFSYDSVKVGDLVVKDQEFIEATR----EPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFW 231 (491)
Q Consensus 156 s~~G~~~~D~v~ig~~~i~~~~fg~~~~----~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~~g~i~~~~FSl~ 231 (491)
++.|.+++|+|++|+..++ +.||++.. .++ +....++||||||++..+.....+++++|++||+|++++||+|
T Consensus 204 s~~G~~~~Dtv~igg~~v~-~~Fg~a~~t~~~~~~--f~~~~~dGILGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~ 280 (451)
T 3qvc_A 204 TISGIFSKDLVTIGKLSVP-YKFIEMTEIVGFEPF--YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIY 280 (451)
T ss_dssp EEEEEEEEEEEEETTEEEE-EEEEEEEEEEECTTH--HHHSCCCEEEECSSBCSSSSCCCCHHHHHHHTTSSSSSEEEEE
T ss_pred EEEEEEEEEEEEECCEEEE-EEEEEEEeccccCCC--ccCCCCCEEEecCCCcccccCCCCHHHHHHHcCCCCCCEEEEE
Confidence 9999999999999999999 99999988 544 5556789999999998887777899999999999999999999
Q ss_pred eCCCCCCCCCeeEEECccCCCCCccceeEEeecccceeEEEEeeEEECCeeceeecCCceEEEcCCCCcccccHHHHHHH
Q 011190 232 LNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMI 311 (491)
Q Consensus 232 l~~~~~~~~~G~L~fGgiD~~~~~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l 311 (491)
|.+.. ...|+|+|||+|+++|.|+++|+|+.+.++|.|.++ |.|++. +.....++|||||+++++|++++++|
T Consensus 281 L~~~~--~~~G~l~fGgiD~s~y~G~l~~~pv~~~~~w~v~l~-I~Vgg~----~~~~~~aiiDSGTt~i~lP~~~~~~i 353 (451)
T 3qvc_A 281 LPPEN--KNKGYLTIGGIEERFFDGPLNYEKLNHDLMWQVDLD-VHFGNV----SSKKANVILDSATSVITVPTEFFNQF 353 (451)
T ss_dssp CCTTC--TTEEEEEESSCCGGGEEEEEEEEECSSTTSSEEEEE-EEETTE----EEEEEEEEECTTBSSEEECHHHHHHH
T ss_pred EcCCC--CCCCEEEECCcchhhcCCceEEEEcccCCeeEEEEE-EEECCc----cCCCceEEEeCCCccccCCHHHHHHH
Confidence 99873 237999999999999999999999999999999999 999998 33567899999999999999999999
Q ss_pred HHHhCCCceeecccchhhhccchhhhhhhhhccCcccccccCcccccCCCccccccccccccccCccccCccCcccchhh
Q 011190 312 NHAIGASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSAC 391 (491)
Q Consensus 312 ~~~l~a~~~~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (491)
++++++..
T Consensus 354 ~~~i~a~~------------------------------------------------------------------------ 361 (451)
T 3qvc_A 354 VESASVFK------------------------------------------------------------------------ 361 (451)
T ss_dssp HTTTTCEE------------------------------------------------------------------------
T ss_pred HHHcCCee------------------------------------------------------------------------
Confidence 99997761
Q ss_pred HHHHHHHHHHhhhchhHHHHHHHHHhhhccCCCCCCceeecCcCCCCCCcEEEEECCEEEeeCcCccEEEeCCCCcceee
Q 011190 392 EMAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCI 471 (491)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~C~~~~~~p~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~ 471 (491)
....|.|.++|+ +..+|+|+|+|+|.+++|+|++|+++..+.+...|+
T Consensus 362 -------------------------------~~~~g~y~v~C~-~~~~P~itf~fgg~~i~lp~~~yi~~~~~~~~~~C~ 409 (451)
T 3qvc_A 362 -------------------------------VPFLSLYVTTCG-NTKLPTLEYRSPNKVYTLEPKQYLEPLENIFSALCM 409 (451)
T ss_dssp -------------------------------CTTSSCEEEETT-CTTCCCEEEEETTEEEEECHHHHEEECTTTSTTEEE
T ss_pred -------------------------------cCCCCeEEeeCC-cCcCCcEEEEECCEEEEEcHHHheeecccCCCCeEE
Confidence 123678999999 789999999999999999999999997655557899
Q ss_pred eceeeccCCCCCCCeeE
Q 011190 472 SGFTAMDVPPPRGPLWY 488 (491)
Q Consensus 472 ~~~~~~~~~~~~~~~~~ 488 (491)
++|++.+.+ ++.||
T Consensus 410 ~~i~~~~~~---~~~~I 423 (451)
T 3qvc_A 410 LNIVPIDLE---KNTFV 423 (451)
T ss_dssp ECEEECCCS---TTEEE
T ss_pred EEEEeCCCC---CCCEE
Confidence 999998754 46787
No 13
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=7.7e-54 Score=448.33 Aligned_cols=296 Identities=31% Similarity=0.631 Sum_probs=265.2
Q ss_pred CcceeeeeecCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCccccCCCCCCCCCCCcceecCceEEEEecCc
Q 011190 76 DTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTG 155 (491)
Q Consensus 76 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C~~~~~C~~~~~f~p~~SsT~~~~~~~~~~~Yg~g 155 (491)
....+||.|+.+.+|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|
T Consensus 126 ~~~~~~L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~-~~~C~~~~~ydps~SsT~~~~~~~~~i~YgdG 204 (453)
T 2bju_A 126 SNDNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCT-TAGCLTKHLYDSSKSRTYEKDGTKVEMNYVSG 204 (453)
T ss_dssp CSEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-STTGGGSCCBCGGGCTTCEEEEEEEEEECSSS
T ss_pred CCCceeeEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCC-ccccCCCCcCCCccCCceeECCcEEEEEcCCC
Confidence 34679999999999999999999999999999999999999999996 56899999999999999999999999999999
Q ss_pred eEEEEEEEEEEEECcEeecccEEEEEEecC--CcccccccccccccCccccccCCCCcchHHHHHHcCCCCCCeEEEEeC
Q 011190 156 AIAGFFSYDSVKVGDLVVKDQEFIEATREP--GVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLN 233 (491)
Q Consensus 156 s~~G~~~~D~v~ig~~~i~~~~fg~~~~~~--~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~~g~i~~~~FSl~l~ 233 (491)
+++|.+++|+|++|+..++ +.||++.... +..+....++||||||++..+.....+++++|++||+|++++||+||.
T Consensus 205 s~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~ 283 (453)
T 2bju_A 205 TVSGFFSKDLVTVGNLSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLP 283 (453)
T ss_dssp EEEEEEEEEEEEETTEEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHHHHHHHTTSSSSCEEEEECC
T ss_pred CeEEEEEEEEEEEeCcEEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHHHHHHHCCCCCCCEEEEEeC
Confidence 9999999999999999999 9999999875 444555678999999999988777889999999999999999999999
Q ss_pred CCCCCCCCeeEEECccCCCCCccceeEEeecccceeEEEEeeEEECCeeceeecCCceEEEcCCCCcccccHHHHHHHHH
Q 011190 234 RNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINH 313 (491)
Q Consensus 234 ~~~~~~~~G~L~fGgiD~~~~~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~ 313 (491)
+.+ ...|.|+|||+|+++|.|++.|+|+.+.++|.|.++ |.|++ .+ . .+..++|||||+++++|.+++++|++
T Consensus 284 ~~~--~~~G~l~fGg~D~~~y~G~l~~~pv~~~~~w~V~l~-I~Vgg-~~--~-~~~~aIiDSGTsl~~lP~~~~~~l~~ 356 (453)
T 2bju_A 284 VHD--KHTGFLTIGGIEERFYEGPLTYEKLNHDLYWQITLD-AHVGN-IM--L-EKANCIVDSGTSAITVPTDFLNKMLQ 356 (453)
T ss_dssp BTT--TBCEEEEESSCCGGGEEEEEEEEEEEEETTEEEEEE-EEETT-EE--E-EEEEEEECTTCCSEEECHHHHHHHTT
T ss_pred CCC--CCCeEEEECCCCHHHcCCceEEEecCCCceEEEEEE-EEECc-EE--e-ccccEEEcCCCCeEecCHHHHHHHHH
Confidence 862 348999999999999999999999998899999999 99999 33 2 56789999999999999999999999
Q ss_pred HhCCCceeecccchhhhccchhhhhhhhhccCcccccccCcccccCCCccccccccccccccCccccCccCcccchhhHH
Q 011190 314 AIGASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEM 393 (491)
Q Consensus 314 ~l~a~~~~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (491)
++++.
T Consensus 357 ~i~~~--------------------------------------------------------------------------- 361 (453)
T 2bju_A 357 NLDVI--------------------------------------------------------------------------- 361 (453)
T ss_dssp TSSCE---------------------------------------------------------------------------
T ss_pred HhCCc---------------------------------------------------------------------------
Confidence 88765
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHhhhccCCCCCC-ceeecCcCCCCCCcEEEEECCEEEeeCcCccEEEeCCCCcceeee
Q 011190 394 AVVWMQNQLQQNQTQENILQYVNELCDRMPSPMG-ESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCIS 472 (491)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~C~~~~~~p~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~ 472 (491)
+...| .|.++|+. ..+|.|+|+|+|++++|+|++|+++...++...|++
T Consensus 362 -----------------------------~~~~g~~~~v~C~~-~~~P~itf~fgg~~~~l~~~~yi~~~~~~g~~~C~~ 411 (453)
T 2bju_A 362 -----------------------------KVPFLPFYVTLCNN-SKLPTFEFTSENGKYTLEPEYYLQHIEDVGPGLCML 411 (453)
T ss_dssp -----------------------------ECTTSSCEEEETTC-TTCCCEEEECSSCEEEECHHHHEEECTTTSTTEEEE
T ss_pred -----------------------------ccCCCceEEEecCC-CCCCcEEEEECCEEEEECHHHhEeecccCCCceEEE
Confidence 12356 78999997 789999999999999999999999976534568999
Q ss_pred ceeeccCCCCCCCeeE
Q 011190 473 GFTAMDVPPPRGPLWY 488 (491)
Q Consensus 473 ~~~~~~~~~~~~~~~~ 488 (491)
+|++.+.+ ++.||
T Consensus 412 ~~~~~~~~---~~~~I 424 (453)
T 2bju_A 412 NIIGLDFP---VPTFI 424 (453)
T ss_dssp CEEECCCS---SCEEE
T ss_pred EEEeCCCC---CCCEE
Confidence 99998854 24776
No 14
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=4.5e-53 Score=432.88 Aligned_cols=301 Identities=29% Similarity=0.477 Sum_probs=264.2
Q ss_pred CCcceeeeeecCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCccccCCCCCCCCCCCcceecCceEEEEecC
Q 011190 75 EDTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGT 154 (491)
Q Consensus 75 ~~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C~~~~~C~~~~~f~p~~SsT~~~~~~~~~~~Yg~ 154 (491)
+....+||.|+.+.+|+++|+||||+|++.|+|||||+++||++..|.....|..++.|+|++|+||+..++.|.+.|++
T Consensus 5 g~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~ 84 (361)
T 1mpp_A 5 GSVDTPGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKETDYNLNITYGT 84 (361)
T ss_dssp CCEEEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSSCCBCGGGCTTCEEEEEEEEEECSS
T ss_pred CccceEEeecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCCCcCCCccCCceEecCCeEEEEECC
Confidence 35667899999999999999999999999999999999999999999523579989999999999999999999999999
Q ss_pred ceEEEEEEEEEEEECcEeecccEEEEEEecCC-----cccccccccccccCccccccCCC------CcchHHHHHHcCCC
Q 011190 155 GAIAGFFSYDSVKVGDLVVKDQEFIEATREPG-----VTFMVAKFDGILGLGFQEISVGN------AVPVWYNMVKQGLI 223 (491)
Q Consensus 155 gs~~G~~~~D~v~ig~~~i~~~~fg~~~~~~~-----~~~~~~~~~GIlGLg~~~~s~~~------~~~~~~~L~~~g~i 223 (491)
|++.|.+++|+|++|+..++++.||++....+ ..+....++||||||++..+... .++++++|++||+|
T Consensus 85 Gs~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i 164 (361)
T 1mpp_A 85 GGANGIYFRDSITVGGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLI 164 (361)
T ss_dssp CEEEEEEEEEEEEETTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSS
T ss_pred ceEEEEEEEEEEEECCEEEeceEEEEEEeccCccccccccccCCCCCEEEeCCcccccccccccccCCCHHHHHHHcCCC
Confidence 99999999999999999999999999998754 34555678999999998876533 78899999999999
Q ss_pred CCCeEEEEeCCCCCCCCCeeEEECccCCCCCccceeEEeecccc----eeEEEEeeEEECCeeceeecCCceEE-EcCCC
Q 011190 224 QDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKG----YWQFNMGDVLIGGKPTGYCAGGCSAI-ADSGT 298 (491)
Q Consensus 224 ~~~~FSl~l~~~~~~~~~G~L~fGgiD~~~~~G~l~~~pv~~~~----~w~v~l~~i~vgg~~~~~~~~~~~ai-iDTGT 298 (491)
.+++||+||.+. ...|.|+|||+|+++|.|+++|+|+.+.. +|.|.+++|.|+++.+. +.....+| |||||
T Consensus 165 ~~~~FS~~l~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~-~~~~~~ai~iDSGT 240 (361)
T 1mpp_A 165 SSPVFSVYMNTN---DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAV-SFDGAQAFTIDTGT 240 (361)
T ss_dssp SSSEEEEECCCS---SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEEE-EEEEEEEEEEETTC
T ss_pred CCcEEEEEecCC---CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEEECCeeec-cCCCCEEEEECCCC
Confidence 999999999885 23799999999999999999999997765 99999999999998764 33567899 99999
Q ss_pred CcccccHHHHHHHHHHhCCCceeecccchhhhccchhhhhhhhhccCcccccccCcccccCCCccccccccccccccCcc
Q 011190 299 SLLAGPTTVITMINHAIGASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDK 378 (491)
Q Consensus 299 t~i~lP~~~~~~l~~~l~a~~~~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C~~~~~~~~~~~~~~~~~~~~~~ 378 (491)
+++++|.+++++|++++++..
T Consensus 241 t~~~lP~~~~~~l~~~~~~~~----------------------------------------------------------- 261 (361)
T 1mpp_A 241 NFFIAPSSFAEKVVKAALPDA----------------------------------------------------------- 261 (361)
T ss_dssp CSEEEEHHHHHHHHHHHCTTC-----------------------------------------------------------
T ss_pred CceeCCHHHHHHHHHHhCCcc-----------------------------------------------------------
Confidence 999999999999999998750
Q ss_pred ccCccCcccchhhHHHHHHHHHHhhhchhHHHHHHHHHhhhccCCCCCCceeecCcCCCCC-CcEEEEE--C-----CEE
Q 011190 379 SSGVLNNAMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSM-PIVSFTI--G-----GKV 450 (491)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~C~~~~~~-p~i~f~~--~-----g~~ 450 (491)
+...|.|.++|+.+..+ |.|+|+| + |++
T Consensus 262 --------------------------------------------~~~~g~~~~~C~~~~~~~p~i~f~f~~g~~~~~g~~ 297 (361)
T 1mpp_A 262 --------------------------------------------TESQQGYTVPCSKYQDSKTTFSLVLQKSGSSSDTID 297 (361)
T ss_dssp --------------------------------------------EEETTEEEEEHHHHTTCCCEEEEEEECTTCSSCEEE
T ss_pred --------------------------------------------cCCCCcEEEECCCcccCCCcEEEEEEcCCcCCCCeE
Confidence 12356789999988888 9999999 8 899
Q ss_pred EeeCcCccEEEeCCCCcceeeeceeeccCCCCCCCeeE
Q 011190 451 FDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRGPLWY 488 (491)
Q Consensus 451 ~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~~ 488 (491)
++|+|++|+++... +...|+++|++.+ ++.||
T Consensus 298 ~~i~~~~y~~~~~~-~~~~C~~~i~~~~-----~~~~i 329 (361)
T 1mpp_A 298 VSVPISKMLLPVDK-SGETCMFIVLPDG-----GNQFI 329 (361)
T ss_dssp EEEEGGGGEEECSS-SSCEEEESEEEES-----SSCCE
T ss_pred EEECHHHhEEecCC-CCCeeEEEEEeCC-----CCCEE
Confidence 99999999998653 2368999999862 35676
No 15
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=1e-52 Score=425.07 Aligned_cols=292 Identities=29% Similarity=0.503 Sum_probs=260.2
Q ss_pred cceeeeeecCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCccc--cCCCCCCCCCCCcceecCceEEEEecC
Q 011190 77 TDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVAC--YFHSKYKSSQSSTYKKNGESASIQYGT 154 (491)
Q Consensus 77 ~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C~~~~~C--~~~~~f~p~~SsT~~~~~~~~~~~Yg~ 154 (491)
...+||.|+.+..|+++|+|| ||++.|++||||+++||++..|. ...| ..++.|+|++| ||+..++.|.+.|++
T Consensus 6 ~~~~~l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~~~y~~~~S-T~~~~~~~~~i~Yg~ 81 (330)
T 1yg9_A 6 PLYKLVHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECV-GGACVCPNLQKYEKLKP-KYISDGNVQVKFFDT 81 (330)
T ss_dssp CSCSCEEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCC-SGGGGSTTCCCCCCSSC-EEEEEEEEEEEETTT
T ss_pred eeEeeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-CccCcccccCccCCCCC-ceEECCCEEEEEECC
Confidence 334789999999999999999 89999999999999999999996 5679 88899999999 999999999999999
Q ss_pred ceEEEEEEEEEEEECcEeecccEEEEEEecCCcccccccccccccCcccccc-CCCCcchHHHHHHcCCCCCCeEEEEeC
Q 011190 155 GAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEIS-VGNAVPVWYNMVKQGLIQDPVFSFWLN 233 (491)
Q Consensus 155 gs~~G~~~~D~v~ig~~~i~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s-~~~~~~~~~~L~~~g~i~~~~FSl~l~ 233 (491)
|++.|.+++|+|++|+..++++.||++... +..|....++||||||++..+ ....++++++|++||+| +++||+||.
T Consensus 82 Gs~~G~~~~Dtv~ig~~~~~~~~fg~~~~~-~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i-~~~FS~~l~ 159 (330)
T 1yg9_A 82 GSAVGRGIEDSLTISQLTTSQQDIVLADEL-SQEVCILSADVVVGIAAPGCPNALKGKTVLENFVEENLI-APVFSIHHA 159 (330)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEEEEEEEE-CTHHHHTTCSEEEECSCTTSCCTTSCCCHHHHHHHTTSS-CSEEEEEEE
T ss_pred ceEEEEEEEEEEEECCEEEcCeEEEEEEEc-ccccccccCceEEEcCcchhccccCCCCHHHHHHhcCCC-CceEEEEEc
Confidence 999999999999999999999999999987 434555678999999999887 66778899999999999 999999998
Q ss_pred CCCCCCCCeeEEECccCCCCCccceeEEeecccceeEEEEeeEEECCeeceeecCCceEEEcCCCCcccccHHHHHHHHH
Q 011190 234 RNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINH 313 (491)
Q Consensus 234 ~~~~~~~~G~L~fGgiD~~~~~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~ 313 (491)
+..+....|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|.|+++.+. ..+..+||||||+++++|++++++|++
T Consensus 160 ~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~--~~~~~aiiDSGTs~~~lP~~~~~~l~~ 237 (330)
T 1yg9_A 160 RFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGDDSWKFRLDGVKIGDTTVA--PAGTQAIIDTSKAIIVGPKAYVNPINE 237 (330)
T ss_dssp ECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCTTSCCEECSEEEETTEEEE--CTTCEEEECTTCSSEEEEHHHHHHHHH
T ss_pred CCCCCCCCCEEEECCcCHHHccCceEEEECCCCCEEEEEeCeEEECCEEEc--CCCcEEEEecCCccccCCHHHHHHHHH
Confidence 864333379999999999999999999999999999999999999998764 467899999999999999999999999
Q ss_pred HhCCCceeecccchhhhccchhhhhhhhhccCcccccccCcccccCCCccccccccccccccCccccCccCcccchhhHH
Q 011190 314 AIGASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEM 393 (491)
Q Consensus 314 ~l~a~~~~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (491)
++++..
T Consensus 238 ~~~~~~-------------------------------------------------------------------------- 243 (330)
T 1yg9_A 238 AIGCVV-------------------------------------------------------------------------- 243 (330)
T ss_dssp HHTCEE--------------------------------------------------------------------------
T ss_pred HhCCcc--------------------------------------------------------------------------
Confidence 997761
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHhhhccCCCCCC--ce-eecCcCCCCCCcEEEEECCEEEeeCcCccEEEeCCCCccee
Q 011190 394 AVVWMQNQLQQNQTQENILQYVNELCDRMPSPMG--ES-AVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQC 470 (491)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~-~~~C~~~~~~p~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C 470 (491)
...| .| .++|+.+..+|.|+|+|+|++++|+|++|+++. ...|
T Consensus 244 ------------------------------~~~g~~~~~~~~C~~~~~~p~i~f~fgg~~~~l~~~~y~~~~----~~~C 289 (330)
T 1yg9_A 244 ------------------------------EKTTTRRICKLDCSKIPSLPDVTFVINGRNFNISSQYYIQQN----GNLC 289 (330)
T ss_dssp ------------------------------EECSSCEEEEECGGGGGGSCCEEEEETTEEEEECHHHHEEEE----TTEE
T ss_pred ------------------------------cCCCceEEEEEECCCccccCcEEEEECCEEEEECHHHhcccC----CCcE
Confidence 1135 68 899998888999999999999999999999987 2679
Q ss_pred eeceeeccCCCCCCCeeE
Q 011190 471 ISGFTAMDVPPPRGPLWY 488 (491)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~ 488 (491)
+++|++.. .++.||
T Consensus 290 ~~~i~~~~----~~~~~i 303 (330)
T 1yg9_A 290 YSGFQPCG----HSDHFF 303 (330)
T ss_dssp EESEEEET----TCSSEE
T ss_pred EEEEEeCC----CCCeEE
Confidence 99999862 356787
No 16
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=3e-50 Score=406.82 Aligned_cols=288 Identities=28% Similarity=0.444 Sum_probs=246.9
Q ss_pred ecCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCccccCCCCCCCCCCCccee-cCceEEEEecCce-EEEEE
Q 011190 84 NYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKK-NGESASIQYGTGA-IAGFF 161 (491)
Q Consensus 84 n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C~~~~~C~~~~~f~p~~SsT~~~-~~~~~~~~Yg~gs-~~G~~ 161 (491)
.+.+.+|+++|+||||+|++.|+|||||+++||++..|. ...|..++.|+|++|+||+. .++.|.+.|++|+ ++|.+
T Consensus 11 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~~~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~ 89 (329)
T 3c9x_A 11 DSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETP-KSSATGHAIYTPSKSSTSKKVSGASWSISYGDGSSSSGDV 89 (329)
T ss_dssp STTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCGGGCTTCEECTTCBEEEECTTSCEEEEEE
T ss_pred CCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCC-ccccCCCCcCCcccCcCceEcCCCeEEEEeCCCCcEEEEE
Confidence 345789999999999999999999999999999999996 34567788999999999999 6899999999998 89999
Q ss_pred EEEEEEECcEeecccEEEEEEecCCcccccccccccccCccccccC---CCCcchHHHHHHcCCCCCCeEEEEeCCCCCC
Q 011190 162 SYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISV---GNAVPVWYNMVKQGLIQDPVFSFWLNRNQQE 238 (491)
Q Consensus 162 ~~D~v~ig~~~i~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~---~~~~~~~~~L~~~g~i~~~~FSl~l~~~~~~ 238 (491)
++|+|++|+..++++.||++...++..+....++||||||++..+. ...++++++|+++ |.+++||+||.+.
T Consensus 90 ~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~l~~~--- 164 (329)
T 3c9x_A 90 YTDKVTIGGFSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAASS--LAEPLFTADLRHG--- 164 (329)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHHTT--SSSSEEEEECCSS---
T ss_pred EEEEEEECCEEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHHHHHh--cCCCEEEEEecCC---
Confidence 9999999999999999999998654322235679999999988765 2467899999986 8899999999874
Q ss_pred CCCeeEEECccCCCCCccceeEEeec-ccceeEEEEeeEEECCeeceeecCCceEEEcCCCCcccccHHHHHHHHHHhCC
Q 011190 239 DEGGEIVFGGVDPNHYKGKHTYVPVT-QKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAIGA 317 (491)
Q Consensus 239 ~~~G~L~fGgiD~~~~~G~l~~~pv~-~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l~a 317 (491)
..|.|+|||+|+++|.|++.|+|+. ..++|.|.+++|.|+++.+ +.....+||||||+++++|++++++|++++.+
T Consensus 165 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~ 241 (329)
T 3c9x_A 165 -QNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKL--NRNSIDGIADTGTTLLLLDDNVVDAYYANVQS 241 (329)
T ss_dssp -SCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCC--CSCCEEEEECTTCCSEEECHHHHHHHHTTCTT
T ss_pred -CCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEec--cCCCceEEEECCCCcEeCCHHHHHHHHHhCCC
Confidence 2799999999999999999999997 5789999999999999875 34678999999999999999999999999854
Q ss_pred CceeecccchhhhccchhhhhhhhhccCcccccccCcccccCCCccccccccccccccCccccCccCcccchhhHHHHHH
Q 011190 318 SGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAVVW 397 (491)
Q Consensus 318 ~~~~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (491)
..+
T Consensus 242 a~~----------------------------------------------------------------------------- 244 (329)
T 3c9x_A 242 AQY----------------------------------------------------------------------------- 244 (329)
T ss_dssp CEE-----------------------------------------------------------------------------
T ss_pred cEE-----------------------------------------------------------------------------
Confidence 311
Q ss_pred HHHHhhhchhHHHHHHHHHhhhccCCCCCCceeecCcCCCCCCcEEEEECCEEEeeCcCccEEEeCCCCcceeeeceeec
Q 011190 398 MQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAM 477 (491)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~C~~~~~~p~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~ 477 (491)
....|.|.++|+ ..+|.|+|+|+|++++|++++|+++....+...|+++|++.
T Consensus 245 -------------------------~~~~~~~~~~C~--~~~P~i~f~f~g~~~~ip~~~~~~~~~~~~~~~C~~~i~~~ 297 (329)
T 3c9x_A 245 -------------------------DNQQEGVVFDCD--EDLPSFSFGVGSSTITIPGDLLNLTPLEEGSSTCFGGLQSS 297 (329)
T ss_dssp -------------------------ETTTTEEEEETT--CCCCCEEEEETTEEEEECGGGGEEEESSTTCSEEEESEEEC
T ss_pred -------------------------cCCCCEEEEECC--CCCCcEEEEECCEEEEECHHHeeeeccCCCCCeEEEEEEcC
Confidence 123567889999 48999999999999999999999886443447899999876
Q ss_pred cCCCCCCCeeE
Q 011190 478 DVPPPRGPLWY 488 (491)
Q Consensus 478 ~~~~~~~~~~~ 488 (491)
+ .++.||
T Consensus 298 ~----~~~~~I 304 (329)
T 3c9x_A 298 S----GIGINI 304 (329)
T ss_dssp T----TTTSEE
T ss_pred C----CCCcEE
Confidence 4 245676
No 17
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=5.8e-50 Score=404.09 Aligned_cols=285 Identities=36% Similarity=0.661 Sum_probs=247.6
Q ss_pred ecCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCccccCCCCCCCCCCCcceecCceEEEEecCce-EEEEEE
Q 011190 84 NYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGA-IAGFFS 162 (491)
Q Consensus 84 n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C~~~~~C~~~~~f~p~~SsT~~~~~~~~~~~Yg~gs-~~G~~~ 162 (491)
+..+.+|+++|+||||+|++.|++||||+++||++..|..+ |..++.|+|++|+||+..++.|.+.|++|+ ++|.++
T Consensus 11 ~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c--~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~~G~~~ 88 (325)
T 2apr_A 11 YGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC--GSGQTKYDPNQSSTYQADGRTWSISYGDGSSASGILA 88 (325)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC--CTTSCCBCGGGCTTCEEEEEEEEEECTTSCEEEEEEE
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH--hcCCCCCCcccCCCeeeCCCEEEEEECCCCCEEEEEE
Confidence 45688999999999999999999999999999999999743 677889999999999999999999999998 799999
Q ss_pred EEEEEECcEeecccEEEEEEecCCcccccccccccccCccccccC-CCCcchHHHHHHcCCCCCCeEEEEeCCCCCCCCC
Q 011190 163 YDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISV-GNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEG 241 (491)
Q Consensus 163 ~D~v~ig~~~i~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~-~~~~~~~~~L~~~g~i~~~~FSl~l~~~~~~~~~ 241 (491)
+|+|++|+..++++.||++..... .|....++||||||++..+. ...++++++|++||+|++++||+||.+... ...
T Consensus 89 ~D~v~~g~~~v~~~~fg~~~~~~~-~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~-~~~ 166 (325)
T 2apr_A 89 KDNVNLGGLLIKGQTIELAKREAA-SFASGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGKAKN-GGG 166 (325)
T ss_dssp EEEEEETTEEEEEEEEEEEEEECH-HHHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTSCSSSEEEEEECCGGG-TCC
T ss_pred EEEEEECCEEECcEEEEEEeccCc-ccccCCCceEEEeCCcccccccCCCCHHHHHHhcCCCCCceEEEEecCCCC-CCC
Confidence 999999999999999999988654 35445589999999998764 356789999999999999999999976421 237
Q ss_pred eeEEECccCCCCCccceeEEeec-ccceeEEEEeeEEECCeeceeecCCceEEEcCCCCcccccHHHHHHHHHHhCCCce
Q 011190 242 GEIVFGGVDPNHYKGKHTYVPVT-QKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAIGASGV 320 (491)
Q Consensus 242 G~L~fGgiD~~~~~G~l~~~pv~-~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l~a~~~ 320 (491)
|.|+|||+|+++|.|++.|+|+. ..++|.|.+++|+||+. + ......++|||||+++++|+++++++.+++.+.
T Consensus 167 G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~~-~--~~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~-- 241 (325)
T 2apr_A 167 GEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGTS-T--VASSFDGILDTGTTLLILPNNIAASVARAYGAS-- 241 (325)
T ss_dssp EEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETTE-E--EECCEEEEECTTCSSEEEEHHHHHHHHHHHTCE--
T ss_pred CEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECCE-e--cCCCceEEEecCCccEECCHHHHHHHHHHHhcc--
Confidence 99999999999999999999996 47899999999999993 2 456789999999999999999999999998765
Q ss_pred eecccchhhhccchhhhhhhhhccCcccccccCcccccCCCccccccccccccccCccccCccCcccchhhHHHHHHHHH
Q 011190 321 VSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAVVWMQN 400 (491)
Q Consensus 321 ~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (491)
T Consensus 242 -------------------------------------------------------------------------------- 241 (325)
T 2apr_A 242 -------------------------------------------------------------------------------- 241 (325)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhhchhHHHHHHHHHhhhccCCCCCCceeecCcCCCCCCcEEEEECCEEEeeCcCccEEEeCCCCcceeeeceeeccCC
Q 011190 401 QLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMDVP 480 (491)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~C~~~~~~p~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~ 480 (491)
++. .|.|.++|+. ..+|.|+|+|+|.+++|++++|+++.. ...|+++|++.+
T Consensus 242 ---------------------~~~-~g~~~~~C~~-~~~p~i~f~f~g~~~~ip~~~~~~~~~---~~~C~~~i~~~~-- 293 (325)
T 2apr_A 242 ---------------------DNG-DGTYTISCDT-SAFKPLVFSINGASFQVSPDSLVFEEF---QGQCIAGFGYGN-- 293 (325)
T ss_dssp ---------------------ECS-SSCEEECSCG-GGCCCEEEEETTEEEEECGGGGEEEEE---TTEEEESEEEES--
T ss_pred ---------------------cCC-CCeEEEECCC-CCCCcEEEEECCEEEEECHHHEEEcCC---CCeEEEEEEcCC--
Confidence 011 2678999995 348999999998899999999998754 367999998766
Q ss_pred CCCCCeeE
Q 011190 481 PPRGPLWY 488 (491)
Q Consensus 481 ~~~~~~~~ 488 (491)
++.||
T Consensus 294 ---~~~~i 298 (325)
T 2apr_A 294 ---WGFAI 298 (325)
T ss_dssp ---SSSEE
T ss_pred ---CCCEE
Confidence 34566
No 18
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=3.8e-50 Score=406.12 Aligned_cols=285 Identities=27% Similarity=0.455 Sum_probs=244.0
Q ss_pred CCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCccccCCCCCCCCCCCccee-cCceEEEEecCce-EEEEEEE
Q 011190 86 MDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKK-NGESASIQYGTGA-IAGFFSY 163 (491)
Q Consensus 86 ~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C~~~~~C~~~~~f~p~~SsT~~~-~~~~~~~~Yg~gs-~~G~~~~ 163 (491)
.+.+|+++|+||||+|++.|++||||+++||++..|. ...| .++.|+|++|+||+. .++.|.+.|++|+ ++|.+++
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~-~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~~~ 90 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETT-ASEV-XQTIYTPSKSTTAKLLSGATWSISYGDGSSSSGDVYT 90 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-GGGC--CCCBCGGGCTTCEEEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCC-cccc-ccCccCCccCccceecCCCeEEEEeCCCCcEEEEEEE
Confidence 5789999999999999999999999999999999997 3456 788999999999998 6899999999998 7999999
Q ss_pred EEEEECcEeecccEEEEEEecCCcccccccccccccCccccccC---CCCcchHHHHHHcCCCCCCeEEEEeCCCCCCCC
Q 011190 164 DSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISV---GNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDE 240 (491)
Q Consensus 164 D~v~ig~~~i~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~---~~~~~~~~~L~~~g~i~~~~FSl~l~~~~~~~~ 240 (491)
|+|++|+..++++.||++...++..+....++||||||++..+. ...++++++|+++ |.+++||+||.+. .
T Consensus 91 D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~----~ 164 (329)
T 1oew_A 91 DTVSVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKAS--LDSPVFTADLGYH----A 164 (329)
T ss_dssp EEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHTTT--SSSSEEEEECCSS----S
T ss_pred EEEEECCEEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHHHHh--ccCcEEEEEccCC----C
Confidence 99999999999999999998654322225679999999988765 2467899999887 8899999999874 2
Q ss_pred CeeEEECccCCCCCccceeEEeec-ccceeEEEEeeEEECCeeceeecCCceEEEcCCCCcccccHHHHHHHHHHhCCCc
Q 011190 241 GGEIVFGGVDPNHYKGKHTYVPVT-QKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAIGASG 319 (491)
Q Consensus 241 ~G~L~fGgiD~~~~~G~l~~~pv~-~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l~a~~ 319 (491)
.|+|+|||+|+++|.|++.|+|+. ..++|.|.+++|.|+++.+. .....++|||||+++++|++++++|++++.+..
T Consensus 165 ~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~ 242 (329)
T 1oew_A 165 PGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFK--STSIDGIADTGTTLLYLPATVVSAYWAQVSGAK 242 (329)
T ss_dssp CEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCE--EEEEEEEECTTCCSEEECHHHHHHHHTTSTTCE
T ss_pred CeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeecc--CCCceEEEeCCCCCEECCHHHHHHHHHhCCCcE
Confidence 799999999999999999999997 57899999999999998653 356789999999999999999999999984431
Q ss_pred eeecccchhhhccchhhhhhhhhccCcccccccCcccccCCCccccccccccccccCccccCccCcccchhhHHHHHHHH
Q 011190 320 VVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAVVWMQ 399 (491)
Q Consensus 320 ~~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (491)
+
T Consensus 243 ~------------------------------------------------------------------------------- 243 (329)
T 1oew_A 243 S------------------------------------------------------------------------------- 243 (329)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred E-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHhhhchhHHHHHHHHHhhhccCCCCCCceeecCcCCCCCCcEEEEECCEEEeeCcCccEEEeCCCCcceeeeceeeccC
Q 011190 400 NQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMDV 479 (491)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~C~~~~~~p~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~ 479 (491)
....|.|.++|+ ..+|.|+|+|+|++++|++++|+++....+...|+++|++.+
T Consensus 244 -----------------------~~~~g~~~~~C~--~~~P~i~f~fgg~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~- 297 (329)
T 1oew_A 244 -----------------------SSSVGGYVFPCS--ATLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGGIQSSA- 297 (329)
T ss_dssp -----------------------ETTTTEEEEETT--CCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEEST-
T ss_pred -----------------------cCCCCEEEEECC--CCCCcEEEEECCEEEEECHHHeeeeecCCCCCeEEEEEEeCC-
Confidence 123567899999 489999999999999999999998864334478999998764
Q ss_pred CCCCCCeeE
Q 011190 480 PPPRGPLWY 488 (491)
Q Consensus 480 ~~~~~~~~~ 488 (491)
.++.||
T Consensus 298 ---~~~~~i 303 (329)
T 1oew_A 298 ---GIGINI 303 (329)
T ss_dssp ---TTSSEE
T ss_pred ---CCCceE
Confidence 345676
No 19
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=2.8e-49 Score=401.28 Aligned_cols=282 Identities=30% Similarity=0.503 Sum_probs=246.6
Q ss_pred ceeeeeecCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCC--CCCCccccCCCCCCCCCCCcceecCceEEEEecCc
Q 011190 78 DIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTN--CYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTG 155 (491)
Q Consensus 78 ~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~--C~~~~~C~~~~~f~p~~SsT~~~~~~~~~~~Yg~g 155 (491)
..+||.|. +.+|+++|+||||||++.|++||||+++||++.. |..+..|..++.|+|++|+||+..++.|.+.|++|
T Consensus 3 i~~~l~~~-~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g 81 (339)
T 3fv3_A 3 ISLSLINE-GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSSGTFTPSSSSSYKNLGAAFTIRYGDG 81 (339)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTTTCCBCGGGCTTCEEEEEEEEEECTTS
T ss_pred eeeEEEcC-CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCCCCcCCCccCcceeeCCceEEEEECCC
Confidence 45788886 5789999999999999999999999999999764 65445899899999999999999999999999999
Q ss_pred -eEEEEEEEEEEEECcEeecccEEEEEEecCCcccccccccccccCccccccC----------CCCcchHHHHHHcCCCC
Q 011190 156 -AIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISV----------GNAVPVWYNMVKQGLIQ 224 (491)
Q Consensus 156 -s~~G~~~~D~v~ig~~~i~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~----------~~~~~~~~~L~~~g~i~ 224 (491)
.++|.+++|+|+||+..++++.||++..... .+||||||++..+. ...++++++|++||+|+
T Consensus 82 s~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~-------~~GilGLg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~ 154 (339)
T 3fv3_A 82 STSQGTWGKDTVTINGVSITGQQIADVTQTSV-------DQGILGIGYTSNEAVYDTSGRQTTPNYDNVPVTLKKQGKIR 154 (339)
T ss_dssp CEEEEEEEEEEEEETTEEEEEEEEEEEEEESS-------SSCEEECSCGGGCCCBCTTSCBCSCCCCCHHHHHHHTTSCS
T ss_pred ceEEEEEEEEEEEECCEEECceEEEEEEecCC-------CceeEEecCccccccccccccccCccCCcHHHHHHHCCCCC
Confidence 5899999999999999999999999988653 49999999988653 23567999999999999
Q ss_pred CCeEEEEeCCCCCCCCCeeEEECccCCCCCccceeEEeecccceeEEEEeeEEECCeeceeecCCceEEEcCCCCccccc
Q 011190 225 DPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGP 304 (491)
Q Consensus 225 ~~~FSl~l~~~~~~~~~G~L~fGgiD~~~~~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP 304 (491)
+++||+||.+.. ...|+|+|||+|+++|.|+++|+|+.+..+|.|.+++|.|+++.+.. ...++|||||+++++|
T Consensus 155 ~~~fsl~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~---~~~~iiDSGtt~~~lP 229 (339)
T 3fv3_A 155 TNAYSLYLNSPS--AETGTIIFGGVDNAKYSGKLVAEQVTSSQALTISLASVNLKGSSFSF---GDGALLDSGTTLTYFP 229 (339)
T ss_dssp SSEEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEEBCCSSSCEEEEEEEEESSCEEEE---EEEEEECTTBSSEEEC
T ss_pred CceEEEEECCCC--CCCeEEEEeeechHHeecceEEEecccCccEEEEEEEEEECCEeecC---CccEEEeCCCCCEecC
Confidence 999999998763 23799999999999999999999999988999999999999998753 3689999999999999
Q ss_pred HHHHHHHHHHhCCCceeecccchhhhccchhhhhhhhhccCcccccccCcccccCCCccccccccccccccCccccCccC
Q 011190 305 TTVITMINHAIGASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLN 384 (491)
Q Consensus 305 ~~~~~~l~~~l~a~~~~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (491)
++++++|++++++.-.
T Consensus 230 ~~~~~~i~~~~~~~~~---------------------------------------------------------------- 245 (339)
T 3fv3_A 230 SDFAAQLADKAGARLV---------------------------------------------------------------- 245 (339)
T ss_dssp HHHHHHHHHHHTCEEE----------------------------------------------------------------
T ss_pred HHHHHHHHHHcCCEEc----------------------------------------------------------------
Confidence 9999999999987610
Q ss_pred cccchhhHHHHHHHHHHhhhchhHHHHHHHHHhhhccCCCCCCceeecCcCCCCCCcEEEEEC-CEEEeeCcCccEEEeC
Q 011190 385 NAMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIG-GKVFDLSPEEYILKVG 463 (491)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~C~~~~~~p~i~f~~~-g~~~~l~~~~yi~~~~ 463 (491)
..+...+.|.++|+. ..+|.|+|+|+ |++++|++++|+++.+
T Consensus 246 ------------------------------------~~~~~~~~~~~~C~~-~~~p~i~f~f~~g~~~~v~~~~~~~~~~ 288 (339)
T 3fv3_A 246 ------------------------------------QVARDQYLYFIDCNT-DTSGTTVFNFGNGAKITVPNTEYVYQNG 288 (339)
T ss_dssp ------------------------------------EEETTEEEEEECTTC-CCCSEEEEEETTSCEEEEEGGGGEEECS
T ss_pred ------------------------------------cccccCceEEEecCC-CCCCcEEEEECCCCEEEECHHHheeeCC
Confidence 001135678999996 56999999995 8999999999999863
Q ss_pred CCCcceeeeceee
Q 011190 464 EGPEAQCISGFTA 476 (491)
Q Consensus 464 ~~~~~~C~~~~~~ 476 (491)
+ ..|+++|++
T Consensus 289 ~---~~C~~~i~~ 298 (339)
T 3fv3_A 289 D---GTCLWGIQP 298 (339)
T ss_dssp S---SCEEESEEE
T ss_pred C---CeEEEEEEe
Confidence 2 579999987
No 20
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=5.5e-49 Score=398.42 Aligned_cols=280 Identities=29% Similarity=0.446 Sum_probs=244.7
Q ss_pred ceeeeeecCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCC--CCCC------CccccCCCCCCCCCCCcceecCceEE
Q 011190 78 DIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPST--NCYF------SVACYFHSKYKSSQSSTYKKNGESAS 149 (491)
Q Consensus 78 ~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~--~C~~------~~~C~~~~~f~p~~SsT~~~~~~~~~ 149 (491)
..+||.|. +.+|+++|+||||+|++.|+|||||+++||++. .|.. ...|..++.|+|++|+||+..++.|.
T Consensus 3 ~~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (334)
T 1j71_A 3 VPTTLINE-GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLNQDFS 81 (334)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEEEEEE
T ss_pred eeEEEecC-CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCCCceE
Confidence 45788886 789999999999999999999999999999976 6752 23798899999999999999999999
Q ss_pred EEecCce-EEEEEEEEEEEECcEeecccEEEEEEecCCcccccccccccccCccccccC--CCCcchHHHHHHcCCCCCC
Q 011190 150 IQYGTGA-IAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISV--GNAVPVWYNMVKQGLIQDP 226 (491)
Q Consensus 150 ~~Yg~gs-~~G~~~~D~v~ig~~~i~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~--~~~~~~~~~L~~~g~i~~~ 226 (491)
+.|++|+ ++|.+++|+|++|+..++++.||++.... .++||||||++..+. ....+++++|++||+|+++
T Consensus 82 i~Yg~Gs~~~G~~~~D~v~~g~~~~~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~ 154 (334)
T 1j71_A 82 IEYGDLTSSQGSFYKDTVGFGGISIKNQQFADVTTTS-------VDQGIMGIGFTADEAGYNLYDNVPVTLKKQGIINKN 154 (334)
T ss_dssp EEBTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-------SSSCEEECSCGGGSSTTCCCCCHHHHHHHTTSCSSS
T ss_pred EEECCCCEEEEEEEEEEEEECCEEEccEEEEEEEecC-------CCccEEEEcCCcccCccccCCcHHHHHHHCCCCCcc
Confidence 9999998 68999999999999999999999998753 358999999987654 2456799999999999999
Q ss_pred eEEEEeCCCCCCCCCeeEEECccCCCCCccceeEEeecccceeEEEEeeEEECCeeceeecCCceEEEcCCCCcccccHH
Q 011190 227 VFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTT 306 (491)
Q Consensus 227 ~FSl~l~~~~~~~~~G~L~fGgiD~~~~~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~ 306 (491)
+||+||.+.. ...|.|+|||+|+++|.|++.|+|+.+..+|.|.+++|.|+++.+. .+..++|||||+++++|.+
T Consensus 155 ~Fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~---~~~~~iiDSGTt~~~lP~~ 229 (334)
T 1j71_A 155 AYSLYLNSED--ASTGKIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINFDGTSVS---TNADVVLDSGTTITYFSQS 229 (334)
T ss_dssp EEEEECCCTT--CSEEEEEETEEETTSEEEEEEEEECCCSSSCEEEEEEEEETTEEEE---EEEEEEECTTCSSEEECHH
T ss_pred EEEEEeCCCC--CCCeEEEEeeechHHccCceEEEEccCCCeEEEEEeEEEECCEecc---CCccEEEeCCCCcEecCHH
Confidence 9999998752 2379999999999999999999999988899999999999998775 3468999999999999999
Q ss_pred HHHHHHHHhCCCceeecccchhhhccchhhhhhhhhccCcccccccCcccccCCCccccccccccccccCccccCccCcc
Q 011190 307 VITMINHAIGASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNA 386 (491)
Q Consensus 307 ~~~~l~~~l~a~~~~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (491)
++++|++++++..
T Consensus 230 ~~~~l~~~~~~~~------------------------------------------------------------------- 242 (334)
T 1j71_A 230 TADKFARIVGATW------------------------------------------------------------------- 242 (334)
T ss_dssp HHHHHHHHHTCEE-------------------------------------------------------------------
T ss_pred HHHHHHHHcCCcc-------------------------------------------------------------------
Confidence 9999999998760
Q ss_pred cchhhHHHHHHHHHHhhhchhHHHHHHHHHhhhccCCCCCCcee-ecCcCCCCCCcEEEEE-CCEEEeeCcCccEEEeCC
Q 011190 387 MCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMGESA-VDCGKLSSMPIVSFTI-GGKVFDLSPEEYILKVGE 464 (491)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~C~~~~~~p~i~f~~-~g~~~~l~~~~yi~~~~~ 464 (491)
....+.|. ++|+ .+|.|+|+| +|++++|++++|+++.++
T Consensus 243 ------------------------------------~~~~~~~~~~~C~---~~p~i~f~f~~g~~~~i~~~~y~~~~~~ 283 (334)
T 1j71_A 243 ------------------------------------DSRNEIYRLPSCD---LSGDAVFNFDQGVKITVPLSELILKDSD 283 (334)
T ss_dssp ------------------------------------ETTTTEEECSSSC---CCSEEEEEESTTCEEEEEGGGGEEECSS
T ss_pred ------------------------------------cCCCceEEEEcCC---CCCceEEEEcCCcEEEECHHHheeecCC
Confidence 01234677 8998 489999999 699999999999998654
Q ss_pred CCcceeeeceeecc
Q 011190 465 GPEAQCISGFTAMD 478 (491)
Q Consensus 465 ~~~~~C~~~~~~~~ 478 (491)
+ ..|+++|+..+
T Consensus 284 ~--~~C~~~i~~~~ 295 (334)
T 1j71_A 284 S--SICYFGISRND 295 (334)
T ss_dssp S--SCEEESEEECT
T ss_pred C--CeeEEEEeECC
Confidence 3 35999998753
No 21
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=1.2e-48 Score=397.08 Aligned_cols=285 Identities=26% Similarity=0.446 Sum_probs=245.1
Q ss_pred ceeeeeecCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCC--CCCC------CccccCCCCCCCCCCCcceecCceEE
Q 011190 78 DIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPST--NCYF------SVACYFHSKYKSSQSSTYKKNGESAS 149 (491)
Q Consensus 78 ~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~--~C~~------~~~C~~~~~f~p~~SsT~~~~~~~~~ 149 (491)
..++|.| .+.+|+++|+||||+|++.|+|||||+++||++. .|.. ...|..++.|+|++|+||+..++.|.
T Consensus 3 v~~~l~~-~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (342)
T 2qzx_A 3 VAVTLHN-EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLNTRFD 81 (342)
T ss_dssp EEEEEEE-CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEEEEEE
T ss_pred eeEEEec-CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCCCcEE
Confidence 4578888 4789999999999999999999999999999876 6752 24798899999999999999999999
Q ss_pred EEecCce-EEEEEEEEEEEECcEeecccEEEEEEecCCcccccccccccccCccccccCC--CCcchHHHHHHcCCCCCC
Q 011190 150 IQYGTGA-IAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVG--NAVPVWYNMVKQGLIQDP 226 (491)
Q Consensus 150 ~~Yg~gs-~~G~~~~D~v~ig~~~i~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~--~~~~~~~~L~~~g~i~~~ 226 (491)
+.|++|+ ++|.+++|+|++|+..++++.||++.... .++||||||++..+.. ...+++.+|++||+|+++
T Consensus 82 i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~ 154 (342)
T 2qzx_A 82 IKYGDGSYAKGKLYKDTVGIGGVSVRDQLFANVWSTS-------ARKGILGIGFQSGEATEFDYDNLPISLRNQGIIGKA 154 (342)
T ss_dssp EECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEEC-------SSSCEEECSCGGGCSSSSCCCCHHHHHHHTTSSSSS
T ss_pred EEeCCCCeEEEEEEEEEEEECCEEecceEEEEEEecC-------CCcCEEEEccccccCCCccCccHHHHHHHCCCcCcc
Confidence 9999998 68999999999999999999999998753 3589999999876542 356799999999999999
Q ss_pred eEEEEeCCCCCCCCCeeEEECccCCCCCccceeEEeecccceeEEEEeeEEECCeeceeecCCceEEEcCCCCcccccHH
Q 011190 227 VFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTT 306 (491)
Q Consensus 227 ~FSl~l~~~~~~~~~G~L~fGgiD~~~~~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~ 306 (491)
+||+||.+.. ...|.|+|||+|+++|.|++.|+|+.+..+|.|.+++|.|+++.+. ....++|||||+++++|++
T Consensus 155 ~Fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~---~~~~aiiDSGTt~~~lP~~ 229 (342)
T 2qzx_A 155 AYSLYLNSAE--ASTGQIIFGGIDKAKYSGSLVDLPITSEKKLTVGLRSVNVRGRNVD---ANTNVLLDSGTTISYFTRS 229 (342)
T ss_dssp EEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEE---EEEEEEECTTCSSEEECHH
T ss_pred EEEEEeCCCC--CCCeEEEECccchhhEecceEEEeccCCceEEEEEeEEEECCEecC---CCcCEEEeCCCCCEEcCHH
Confidence 9999998752 2379999999999999999999999988899999999999998775 2468999999999999999
Q ss_pred HHHHHHHHhCCCceeecccchhhhccchhhhhhhhhccCcccccccCcccccCCCccccccccccccccCccccCccCcc
Q 011190 307 VITMINHAIGASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNA 386 (491)
Q Consensus 307 ~~~~l~~~l~a~~~~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (491)
++++|++++++...+
T Consensus 230 ~~~~l~~~~~~~~~~----------------------------------------------------------------- 244 (342)
T 2qzx_A 230 IVRNILYAIGAQMKF----------------------------------------------------------------- 244 (342)
T ss_dssp HHHHHHHHHTCEEEE-----------------------------------------------------------------
T ss_pred HHHHHHHHhCCeeee-----------------------------------------------------------------
Confidence 999999999876100
Q ss_pred cchhhHHHHHHHHHHhhhchhHHHHHHHHHhhhccCCCCCCceeecCcCCCCCCcEEEEE-CCEEEeeCcCccEEEeC--
Q 011190 387 MCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTI-GGKVFDLSPEEYILKVG-- 463 (491)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~C~~~~~~p~i~f~~-~g~~~~l~~~~yi~~~~-- 463 (491)
-+...+.|.++|+ .+|.|+|+| +|++++|++++|+++..
T Consensus 245 -----------------------------------~~~~~~~~~~~C~---~~p~i~f~f~~g~~~~i~~~~~~~~~~~~ 286 (342)
T 2qzx_A 245 -----------------------------------DSAGNKVYVADCK---TSGTIDFQFGNNLKISVPVSEFLFQTYYT 286 (342)
T ss_dssp -----------------------------------CTTSCEEEEECTT---CCCEEEEEETTTEEEEEEGGGGEECCBCT
T ss_pred -----------------------------------ccCCCcEEEEECC---CCCcEEEEECCCcEEEEcHHHhccccccc
Confidence 0112347889998 489999999 69999999999999853
Q ss_pred -CCCcceeeeceeecc
Q 011190 464 -EGPEAQCISGFTAMD 478 (491)
Q Consensus 464 -~~~~~~C~~~~~~~~ 478 (491)
......|+++|++.+
T Consensus 287 ~~~~~~~C~~~i~~~~ 302 (342)
T 2qzx_A 287 SGKPFPKCEVRIRESE 302 (342)
T ss_dssp TSCBCSSEEESEEECS
T ss_pred CCCCCCccEEEEecCC
Confidence 122367999998753
No 22
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=1.8e-48 Score=392.91 Aligned_cols=285 Identities=26% Similarity=0.389 Sum_probs=243.9
Q ss_pred eeeeeecCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCccccCCCCCCCCCCCcceecCceEEEEecCce-E
Q 011190 79 IVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGA-I 157 (491)
Q Consensus 79 ~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C~~~~~C~~~~~f~p~~SsT~~~~~~~~~~~Yg~gs-~ 157 (491)
..|+. .+.+|+++|+|| ||++.|+|||||+++||++..|. ...|..++.|+|++|+ ++..++.|.+.|++|+ +
T Consensus 8 ~~~~~--~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~ 81 (323)
T 1izd_A 8 TNPTS--NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTP-SSERSGHDYYTPGSSA-QKIDGATWSISYGDGSSA 81 (323)
T ss_dssp EEECG--GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTCCCBCCCTTC-EEEEEEEEEEECTTSCEE
T ss_pred eeEcC--CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCC-cccccCCCCCCccccC-CccCCCeEEEEcCCCCeE
Confidence 34543 478999999999 79999999999999999999996 4467788999999999 7777899999999998 8
Q ss_pred EEEEEEEEEEECcEeecccEEEEEEecCCcccccccccccccCccccccC---CCCcchHHHHHHcCCCCCCeEEEEeCC
Q 011190 158 AGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISV---GNAVPVWYNMVKQGLIQDPVFSFWLNR 234 (491)
Q Consensus 158 ~G~~~~D~v~ig~~~i~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~---~~~~~~~~~L~~~g~i~~~~FSl~l~~ 234 (491)
+|.+++|+|++|+..++++.||+++...+..+....++||||||++..+. ...++++++|+++ |.+++||+||.+
T Consensus 82 ~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~L~~ 159 (323)
T 1izd_A 82 SGDVYKDKVTVGGVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSS--LSEPIFAVALKH 159 (323)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEECCT
T ss_pred EEEEEEEEEEECCEEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHHHHh--ccCcEEEEEccC
Confidence 99999999999999999999999998754322235679999999998775 2567899999987 899999999987
Q ss_pred CCCCCCCeeEEECccCCCCCccceeEEeec-ccceeEEEEeeEEECCeeceeecCCceEEEcCCCCcccccHHHHHHHHH
Q 011190 235 NQQEDEGGEIVFGGVDPNHYKGKHTYVPVT-QKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINH 313 (491)
Q Consensus 235 ~~~~~~~G~L~fGgiD~~~~~G~l~~~pv~-~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~ 313 (491)
. ..|+|+|||+|+++|.|++.|+|+. ..++|.|.+++|.|++ .+ +.....+||||||+++++|++++++|++
T Consensus 160 ~----~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~--~~~~~~aiiDSGTs~~~lp~~~~~~i~~ 232 (323)
T 1izd_A 160 N----APGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DS--SSDSITGIADTGTTLLLLDDSIVDAYYE 232 (323)
T ss_dssp T----SCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EE--ECCCEEEEECTTCCSEEECHHHHHHHHT
T ss_pred C----CCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-cc--cCCCceEEEeCCCcceeCCHHHHHHHHH
Confidence 4 2799999999999999999999996 5789999999999999 43 4567899999999999999999999999
Q ss_pred HhCCCceeecccchhhhccchhhhhhhhhccCcccccccCcccccCCCccccccccccccccCccccCccCcccchhhHH
Q 011190 314 AIGASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEM 393 (491)
Q Consensus 314 ~l~a~~~~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (491)
++.+..+
T Consensus 233 ~i~ga~~------------------------------------------------------------------------- 239 (323)
T 1izd_A 233 QVNGASY------------------------------------------------------------------------- 239 (323)
T ss_dssp TSTTCEE-------------------------------------------------------------------------
T ss_pred hCCCcEE-------------------------------------------------------------------------
Confidence 9854311
Q ss_pred HHHHHHHHhhhchhHHHHHHHHHhhhccCCCCCCceeecCcCCCCCCcEEEEECCEEEeeCcCccEEEeCCCCcceeeec
Q 011190 394 AVVWMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISG 473 (491)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~C~~~~~~p~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~~ 473 (491)
....|.|.++|+ ..+|.|+|+|+|++++|++++|+++... ...|+++
T Consensus 240 -----------------------------~~~~g~~~~~C~--~~~P~i~f~fgg~~~~i~~~~~~~~~~~--~~~C~~~ 286 (323)
T 1izd_A 240 -----------------------------DSSQGGYVFPSS--ASLPDFSVTIGDYTATVPGEYISFADVG--NGQTFGG 286 (323)
T ss_dssp -----------------------------ETTTTEEEEETT--CCCCCEEEEETTEEEEECHHHHEEEECS--TTEEEES
T ss_pred -----------------------------cCcCCEEEEECC--CCCceEEEEECCEEEecCHHHeEEecCC--CCeEEEE
Confidence 123577999999 4899999999999999999999988642 3689999
Q ss_pred eeeccCCCCCCCeeE
Q 011190 474 FTAMDVPPPRGPLWY 488 (491)
Q Consensus 474 ~~~~~~~~~~~~~~~ 488 (491)
|++.+ .++.||
T Consensus 287 i~~~~----~~~~~I 297 (323)
T 1izd_A 287 IQSNS----GIGFSI 297 (323)
T ss_dssp EEECT----TTSSEE
T ss_pred EEcCC----CCCcEE
Confidence 98865 245676
No 23
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=3.7e-48 Score=390.87 Aligned_cols=283 Identities=26% Similarity=0.406 Sum_probs=242.9
Q ss_pred CCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCccccCCCCCCCCCCCcceecCceEEEEecCce-EEEEEEEE
Q 011190 86 MDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGA-IAGFFSYD 164 (491)
Q Consensus 86 ~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C~~~~~C~~~~~f~p~~SsT~~~~~~~~~~~Yg~gs-~~G~~~~D 164 (491)
.+.+|+++|+|| +|++.|++||||+++||++..|. ...|..++.|+|++|+ ++..++.|.+.|++|+ ++|.+++|
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 87 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELP-SSEQTGHDLYTPSSSA-TKLSGYSWDISYGDGSSASGDVYRD 87 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSC-HHHHTTSCCCBCCSSC-EECTTCBEEEECSSSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCC-ccccCCCCCCCchhcC-CccCCCEEEEEeCCCCEEEEEEEEe
Confidence 478999999999 89999999999999999999996 4467788999999999 7767999999999998 89999999
Q ss_pred EEEECcEeecccEEEEEEecCCcccccccccccccCccccccC---CCCcchHHHHHHcCCCCCCeEEEEeCCCCCCCCC
Q 011190 165 SVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISV---GNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEG 241 (491)
Q Consensus 165 ~v~ig~~~i~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~---~~~~~~~~~L~~~g~i~~~~FSl~l~~~~~~~~~ 241 (491)
+|++|+..++++.||++....+..+....++||||||++..+. ...++++++|+++ |.+++||+||.+. ..
T Consensus 88 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~l~~~----~~ 161 (325)
T 1ibq_A 88 TVTVGGVTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKSQ--LDSPLFAVQLKHD----AP 161 (325)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEEEETT----EE
T ss_pred EEEECCEEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHHHHh--cCCcEEEEEecCC----CC
Confidence 9999999999999999998754322235679999999988765 2567899999987 8899999999874 27
Q ss_pred eeEEECccCCCCCccceeEEeec-ccceeEEEEeeEEECCeeceeecCCceEEEcCCCCcccccHHHHHHHHHHhCCCce
Q 011190 242 GEIVFGGVDPNHYKGKHTYVPVT-QKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAIGASGV 320 (491)
Q Consensus 242 G~L~fGgiD~~~~~G~l~~~pv~-~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l~a~~~ 320 (491)
|+|+|||+|+++|.|++.|+|+. ..++|.|.+++|.|+++.+ +.....+||||||+++++|++++++|++++.+..+
T Consensus 162 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~~ 239 (325)
T 1ibq_A 162 GVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSS--SSSGFSAIADTGTTLILLDDEIVSAYYEQVSGAQE 239 (325)
T ss_dssp EEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCC--BSCCEEEEECTTCCSEEECHHHHHHHHTTSTTCBC
T ss_pred ceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeec--cCCCceEEEeCCCCcEeCCHHHHHHHHHhCCCceE
Confidence 99999999999999999999997 5789999999999999875 34678999999999999999999999999843310
Q ss_pred eecccchhhhccchhhhhhhhhccCcccccccCcccccCCCccccccccccccccCccccCccCcccchhhHHHHHHHHH
Q 011190 321 VSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAVVWMQN 400 (491)
Q Consensus 321 ~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (491)
T Consensus 240 -------------------------------------------------------------------------------- 239 (325)
T 1ibq_A 240 -------------------------------------------------------------------------------- 239 (325)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhhchhHHHHHHHHHhhhccCCCCCCceeecCcCCCCCCcEEEEECCEEEeeCcCccEEEeCCCCcceeeeceeeccCC
Q 011190 401 QLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMDVP 480 (491)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~C~~~~~~p~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~ 480 (491)
....|.|.++|+ ..+|.|+|+|+|++++|++++|+++..+.+...|+++|++.+
T Consensus 240 ----------------------~~~~g~~~~~C~--~~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~~~C~~~i~~~~-- 293 (325)
T 1ibq_A 240 ----------------------SYEAGGYVFSCS--TDLPDFTVVIGDYKAVVPGKYINYAPVSTGSSTCYGGIQSNS-- 293 (325)
T ss_dssp ----------------------CSSSSSCEEETT--CCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEECT--
T ss_pred ----------------------cCcCCeEEEEcC--CCCCcEEEEECCEEEEECHHHhcccccCCCCCeEEEEEEcCC--
Confidence 123567899999 489999999999999999999998864433468999998764
Q ss_pred CCCCCeeE
Q 011190 481 PPRGPLWY 488 (491)
Q Consensus 481 ~~~~~~~~ 488 (491)
.++.||
T Consensus 294 --~~~~~i 299 (325)
T 1ibq_A 294 --GLGLSI 299 (325)
T ss_dssp --TTCSEE
T ss_pred --CCCceE
Confidence 245676
No 24
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=3.8e-48 Score=393.41 Aligned_cols=284 Identities=29% Similarity=0.448 Sum_probs=242.1
Q ss_pred ceeeeeecCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCC--CC------CCccccCCCCCCCCCCCcceecCceEE
Q 011190 78 DIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTN--CY------FSVACYFHSKYKSSQSSTYKKNGESAS 149 (491)
Q Consensus 78 ~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~--C~------~~~~C~~~~~f~p~~SsT~~~~~~~~~ 149 (491)
..+++.+. +.+|+++|+||||||++.|++||||+++||++.. |. ....|..++.|+|++|+||+..++.|.
T Consensus 3 v~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (342)
T 3pvk_A 3 VPVTLHNE-QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLNTPFK 81 (342)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEEEEEE
T ss_pred cceEEecC-CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecCCeEE
Confidence 45778775 6899999999999999999999999999998764 63 235798899999999999999999999
Q ss_pred EEecCce-EEEEEEEEEEEECcEeecccEEEEEEecCCcccccccccccccCccccccCC-CCcchHHHHHHcCCCCCCe
Q 011190 150 IQYGTGA-IAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVG-NAVPVWYNMVKQGLIQDPV 227 (491)
Q Consensus 150 ~~Yg~gs-~~G~~~~D~v~ig~~~i~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~-~~~~~~~~L~~~g~i~~~~ 227 (491)
+.|++|+ +.|.+++|+|+||+..++++.||+++... ..+||||||++..+.. ..++++++|++||+|++++
T Consensus 82 i~Yg~gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~L~~qg~i~~~~ 154 (342)
T 3pvk_A 82 IGYGDGSSSQGTLYKDTVGFGGVSIKNQVLADVDSTS-------IDQGILGVGYKTNEAGGSYDNVPVTLKKQGVIAKNA 154 (342)
T ss_dssp EECSSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-------SSSCEEECSCGGGCSSCSSCCHHHHHHHTTSSSSSE
T ss_pred EEecCCCeEEEEEEEEEEEECCEEecceEEEEEEccC-------CCccEEEecCccccccccCCcHHHHHHhcCCCCCce
Confidence 9999998 89999999999999999999999998754 3599999999876543 3567999999999999999
Q ss_pred EEEEeCCCCCCCCCeeEEECccCCCCCccceeEEeecccceeEEEEeeEEECCeeceeecCCceEEEcCCCCcccccHHH
Q 011190 228 FSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTV 307 (491)
Q Consensus 228 FSl~l~~~~~~~~~G~L~fGgiD~~~~~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~ 307 (491)
||+||.+.. ...|.|+|||+|+++|.|+++|+|+....+|.|.+++|.|+++.+.. .+..++|||||+++++|.++
T Consensus 155 fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~--~~~~~iiDSGtt~~~lP~~~ 230 (342)
T 3pvk_A 155 YSLYLNSPD--AATGQIIFGGVDNAKYSGSLIALPVTSDRELRISLGSVEVSGKTINT--DNVDVLLDSGTTITYLQQDL 230 (342)
T ss_dssp EEEECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEE--EEEEEEECTTCSSEEECHHH
T ss_pred EEEEeCCCC--CCCcEEEECccCccceeeeeEEeecCccceEEEEEeEEEECCEEecC--CCceEEEeCCCCCeecCHHH
Confidence 999998753 23799999999999999999999999888999999999999998753 34789999999999999999
Q ss_pred HHHHHHHhCCCceeecccchhhhccchhhhhhhhhccCcccccccCcccccCCCccccccccccccccCccccCccCccc
Q 011190 308 ITMINHAIGASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAM 387 (491)
Q Consensus 308 ~~~l~~~l~a~~~~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (491)
+++|++++++....
T Consensus 231 ~~~i~~~~~~~~~~------------------------------------------------------------------ 244 (342)
T 3pvk_A 231 ADQIIKAFNGKLTQ------------------------------------------------------------------ 244 (342)
T ss_dssp HHHHHHHTTCEEEE------------------------------------------------------------------
T ss_pred HHHHHHHcCCeecc------------------------------------------------------------------
Confidence 99999999876110
Q ss_pred chhhHHHHHHHHHHhhhchhHHHHHHHHHhhhccCCCCCCceeecCcCCCCCCcEEEEEC-CEEEeeCcCccEEEeCCC-
Q 011190 388 CSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIG-GKVFDLSPEEYILKVGEG- 465 (491)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~C~~~~~~p~i~f~~~-g~~~~l~~~~yi~~~~~~- 465 (491)
-....+.|.++|+ ..|.|+|+|+ |.+++|++++|+++....
T Consensus 245 ----------------------------------~~~~~~~~~~~C~---~~p~i~f~f~~g~~~~vp~~~~~~~~~~~~ 287 (342)
T 3pvk_A 245 ----------------------------------DSNGNSFYEVDCN---LSGDVVFNFSKNAKISVPASEFAASLQGDD 287 (342)
T ss_dssp ----------------------------------CTTSCEEEEECSC---CCSEEEEEESTTCEEEEEGGGGEEC-----
T ss_pred ----------------------------------cCCCceEEEEecC---CCCceEEEECCCCEEEEcHHHheeeccccC
Confidence 0011335999999 4699999998 899999999999984321
Q ss_pred --Ccceeeeceee
Q 011190 466 --PEAQCISGFTA 476 (491)
Q Consensus 466 --~~~~C~~~~~~ 476 (491)
....|+++|.+
T Consensus 288 g~~~~~C~~~i~~ 300 (342)
T 3pvk_A 288 GQPYDKCQLLFDV 300 (342)
T ss_dssp -----CEEESEEE
T ss_pred CCcCCeeEEEEee
Confidence 13679999987
No 25
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=2e-48 Score=375.93 Aligned_cols=237 Identities=68% Similarity=1.176 Sum_probs=216.7
Q ss_pred ceeeeeecCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCccccCCCCCCCCCCCcceecCceEEEEecCceE
Q 011190 78 DIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGAI 157 (491)
Q Consensus 78 ~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C~~~~~C~~~~~f~p~~SsT~~~~~~~~~~~Yg~gs~ 157 (491)
..+||.|+.+.+|+++|.||||+|++.|+|||||+++||++..|..+..|..++.|+|++|+||+..++.+.+.|++|++
T Consensus 3 ~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~ 82 (239)
T 1b5f_A 3 AVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAHSMYESSDSSTYKENGTFGAIIYGTGSI 82 (239)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEE
T ss_pred ceeeeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCCCCCCCccCCCeeeCCcEEEEEECCCcE
Confidence 46899999999999999999999999999999999999999999655689989999999999999999999999999999
Q ss_pred EEEEEEEEEEECcEeecccEEEEEEecCCcccccccccccccCccccccCCCCcchHHHHHHcCCCCCCeEEEEeCCCCC
Q 011190 158 AGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQ 237 (491)
Q Consensus 158 ~G~~~~D~v~ig~~~i~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~~g~i~~~~FSl~l~~~~~ 237 (491)
+|.+++|+|++|+..++++.||++....+..|....++||||||++..+ .|++++|++||+|.+++||+||.+..+
T Consensus 83 ~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s----~p~~~~l~~qg~i~~~~FS~~l~~~~~ 158 (239)
T 1b5f_A 83 TGFFSQDSVTIGDLVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTIS----VPVWYNMLNQGLVKERRFSFWLNRNVD 158 (239)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSS----CCHHHHHHHTTCCSSSEEEEEECCSCS
T ss_pred EEEEEEEEEEECCcEEccEEEEEEEeccCccccccCcceEEecCccccc----cHHHHHHHHCCCCCCCEEEEEEeCCCC
Confidence 9999999999999999999999998876544556678999999998776 568899999999999999999988643
Q ss_pred CCCCeeEEECccCCCCCccceeEEeecccceeEEEEeeEEECCeeceeecCCceEEEcCCCCcccccHHHHHHHHHHhCC
Q 011190 238 EDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAIGA 317 (491)
Q Consensus 238 ~~~~G~L~fGgiD~~~~~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l~a 317 (491)
....|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|.|+++.+.++.....++|||||+++++|++++++|++++++
T Consensus 159 ~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 159 EEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp SSCCEEEEETSCCGGGEEEEEEEEEEEEETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred CCCCeEEEECCcChhhccCceEEEEcccCCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 33489999999999999999999999988999999999999999876666678999999999999999999999999987
Q ss_pred C
Q 011190 318 S 318 (491)
Q Consensus 318 ~ 318 (491)
.
T Consensus 239 ~ 239 (239)
T 1b5f_A 239 N 239 (239)
T ss_dssp C
T ss_pred C
Confidence 4
No 26
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=5.4e-48 Score=392.10 Aligned_cols=286 Identities=26% Similarity=0.471 Sum_probs=244.5
Q ss_pred ceeeeeecCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCccccCCCCCCCCCCCcceecCceEEEEecCceE
Q 011190 78 DIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGAI 157 (491)
Q Consensus 78 ~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C~~~~~C~~~~~f~p~~SsT~~~~~~~~~~~Yg~gs~ 157 (491)
..+||.|+ +..|+++|+||||+|++.|+|||||+++||+|. +.|+|++|+++ .++.|.+.|++|++
T Consensus 3 ~~~~l~n~-~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-----------~~y~~s~Ss~~--~~~~~~i~Yg~Gs~ 68 (340)
T 1wkr_A 3 GSVPATNQ-LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-----------KSYVKTSTSSA--TSDKVSVTYGSGSF 68 (340)
T ss_dssp EEEEEEEC-SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS-----------SCCCCCTTCEE--EEEEEEEECSSCEE
T ss_pred ccEeeecc-CcEEEEEEEECCCCcEEEEEEeCCChhheecCC-----------CccCCcCCccc--cCceEEEEECCcEE
Confidence 45899997 579999999999999999999999999999642 46899887754 57899999999999
Q ss_pred EEEEEEEEEEECcEeecccEEEEEEecCCcccccccccccccCccccccC--------CCCcchHHHHHHcCCCCCCeEE
Q 011190 158 AGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISV--------GNAVPVWYNMVKQGLIQDPVFS 229 (491)
Q Consensus 158 ~G~~~~D~v~ig~~~i~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~--------~~~~~~~~~L~~~g~i~~~~FS 229 (491)
+|.+++|+|+||+..++++.||++....+ + ..++||||||++..+. ...++++++|++||+|++++||
T Consensus 69 ~G~~~~Dtv~~g~~~v~~~~fg~~~~~~~--~--~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS 144 (340)
T 1wkr_A 69 SGTEYTDTVTLGSLTIPKQSIGVASRDSG--F--DGVDGILGVGPVDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLA 144 (340)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEES--C--TTCSEEEECSCGGGGTTSEESCTTCCCCCHHHHHHHTTSSSSSEEE
T ss_pred EEEEEEEEEEECCEEEcceEEEEEEccCC--C--cCCCcEEECCccccccccccccccccCCCHHHHHHHcCCCCCCEEE
Confidence 99999999999999999999999998643 2 2579999999988765 3467899999999999999999
Q ss_pred EEeCCCC-CCCCCeeEEECccCCCCCccceeEEeecc----cceeEEEEeeEEECC-eeceeecCCceEEEcCCCCcccc
Q 011190 230 FWLNRNQ-QEDEGGEIVFGGVDPNHYKGKHTYVPVTQ----KGYWQFNMGDVLIGG-KPTGYCAGGCSAIADSGTSLLAG 303 (491)
Q Consensus 230 l~l~~~~-~~~~~G~L~fGgiD~~~~~G~l~~~pv~~----~~~w~v~l~~i~vgg-~~~~~~~~~~~aiiDTGTt~i~l 303 (491)
+||.+.. +....|+|+|||+|+++|.|++.|+|+.+ .++|.|. ++|.|++ +.+. ....++|||||+++++
T Consensus 145 ~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~~~l~---~~~~aiiDSGTt~~~l 220 (340)
T 1wkr_A 145 VSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSSTSIL---SSTAGIVDTGTTLTLI 220 (340)
T ss_dssp EECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTTEEEE---EEEEEEECTTBCSEEE
T ss_pred EEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCCeEcc---CCCeEEEeCCcccccC
Confidence 9998742 12247999999999999999999999977 7899999 9999998 7653 2368999999999999
Q ss_pred cHHHHHHHHHHhCCCceeecccchhhhccchhhhhhhhhccCcccccccCcccccCCCccccccccccccccCccccCcc
Q 011190 304 PTTVITMINHAIGASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVL 383 (491)
Q Consensus 304 P~~~~~~l~~~l~a~~~~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (491)
|.+++++|.+++++.-
T Consensus 221 P~~~~~~l~~~~~a~~---------------------------------------------------------------- 236 (340)
T 1wkr_A 221 ASDAFAKYKKATGAVA---------------------------------------------------------------- 236 (340)
T ss_dssp CHHHHHHHHHHHTCEE----------------------------------------------------------------
T ss_pred CHHHHHHHHHhhCCEE----------------------------------------------------------------
Confidence 9999999999987760
Q ss_pred CcccchhhHHHHHHHHHHhhhchhHHHHHHHHHhhhccCCCCCCceeecCcCCCCCCcEEEEECCEEEeeCcCccEEEeC
Q 011190 384 NNAMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVG 463 (491)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~C~~~~~~p~i~f~~~g~~~~l~~~~yi~~~~ 463 (491)
....|.|.++|+....+|+|+|+|+|++|+|+|++|+++..
T Consensus 237 ---------------------------------------~~~~g~~~~~C~~~~~~p~i~f~f~g~~~~i~~~~yi~~~~ 277 (340)
T 1wkr_A 237 ---------------------------------------DNNTGLLRLTTAQYANLQSLFFTIGGQTFELTANAQIWPRN 277 (340)
T ss_dssp ---------------------------------------CTTTSSEEECHHHHHTCCCEEEEETTEEEEECTGGGBCCGG
T ss_pred ---------------------------------------cCCCCeEEeeccccccCCcEEEEECCEEEEEcHHHhccccc
Confidence 12357799999977789999999999999999999998754
Q ss_pred CC-----CcceeeeceeeccCCCCCCCeeE
Q 011190 464 EG-----PEAQCISGFTAMDVPPPRGPLWY 488 (491)
Q Consensus 464 ~~-----~~~~C~~~~~~~~~~~~~~~~~~ 488 (491)
.. ....|+++|.+++.+.+.++.||
T Consensus 278 ~~~~~g~~~~~c~~~~~~~~~~~~~~~~~i 307 (340)
T 1wkr_A 278 LNTAIGGSASSVYLIVGDLGSDSGEGLDFI 307 (340)
T ss_dssp GGGGGTCCSSCEEBCEEECSSCTTSSCCEE
T ss_pred cccccCCCCceEEEEEecCCCCCCCCcceE
Confidence 21 23579999999887665677787
No 27
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=1.7e-48 Score=393.12 Aligned_cols=286 Identities=27% Similarity=0.412 Sum_probs=242.9
Q ss_pred ceeeeeecCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCccccCCCCCCCCCCCcceecCceEEEEecCce-
Q 011190 78 DIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGA- 156 (491)
Q Consensus 78 ~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C~~~~~C~~~~~f~p~~SsT~~~~~~~~~~~Yg~gs- 156 (491)
...|+. .+.+|+++|+|| ||++.|+|||||+++||++..|. ...|..++.|+|++|+ ++..++.|.+.|++|+
T Consensus 7 ~~~~~~--~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~ 80 (323)
T 1bxo_A 7 TNTPTA--NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELP-ASQQSGHSVYNPSATG-KELSGYTWSISYGDGSS 80 (323)
T ss_dssp EEEECG--GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCHHHHC-EEEEEEEEEEECTTSCE
T ss_pred eeeecC--CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-chhccCCCCCCcccCC-cccCCCeEEEEeCCCCe
Confidence 334543 478999999999 89999999999999999999996 4467788999999999 8778899999999998
Q ss_pred EEEEEEEEEEEECcEeecccEEEEEEecCCcccccccccccccCccccccCC---CCcchHHHHHHcCCCCCCeEEEEeC
Q 011190 157 IAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVG---NAVPVWYNMVKQGLIQDPVFSFWLN 233 (491)
Q Consensus 157 ~~G~~~~D~v~ig~~~i~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~---~~~~~~~~L~~~g~i~~~~FSl~l~ 233 (491)
++|.+++|+|++|+..++++.||+++..++..+....++||||||++..+.. ..++++++|+++ |.+++||+||.
T Consensus 81 ~~G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~ 158 (323)
T 1bxo_A 81 ASGNVFTDSVTVGGVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSS--LAQPLFAVALK 158 (323)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGGG--BSSSEEEEECC
T ss_pred EEEEEEEEEEEECCEEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHHHHh--cCCcEEEEEEe
Confidence 8999999999999999999999999986543222356799999999887652 467899999987 89999999998
Q ss_pred CCCCCCCCeeEEECccCCCCCccceeEEeec-ccceeEEEEeeEEECCeeceeecCCceEEEcCCCCcccccHHHHHHHH
Q 011190 234 RNQQEDEGGEIVFGGVDPNHYKGKHTYVPVT-QKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMIN 312 (491)
Q Consensus 234 ~~~~~~~~G~L~fGgiD~~~~~G~l~~~pv~-~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~ 312 (491)
+. ..|+|+|||+|+++|.|++.|+|+. ..++|.|.+++|.|++ + ......+||||||+++++|++++++|+
T Consensus 159 ~~----~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~--~--~~~~~~aiiDSGTs~~~lP~~~~~~l~ 230 (323)
T 1bxo_A 159 HQ----QPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS--Q--SGDGFSGIADTGTTLLLLDDSVVSQYY 230 (323)
T ss_dssp SS----SCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT--E--EEEEEEEEECTTCSSEEECHHHHHHHH
T ss_pred CC----CCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC--c--cCCCceEEEeCCCCceeCCHHHHHHHH
Confidence 74 2799999999999999999999996 5789999999999999 2 345678999999999999999999999
Q ss_pred HHhCCCceeecccchhhhccchhhhhhhhhccCcccccccCcccccCCCccccccccccccccCccccCccCcccchhhH
Q 011190 313 HAIGASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACE 392 (491)
Q Consensus 313 ~~l~a~~~~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (491)
+++.+..+
T Consensus 231 ~~i~~a~~------------------------------------------------------------------------ 238 (323)
T 1bxo_A 231 SQVSGAQQ------------------------------------------------------------------------ 238 (323)
T ss_dssp TTSTTCEE------------------------------------------------------------------------
T ss_pred HhCCCceE------------------------------------------------------------------------
Confidence 99844310
Q ss_pred HHHHHHHHHhhhchhHHHHHHHHHhhhccCCCCCCceeecCcCCCCCCcEEEEECCEEEeeCcCccEEEeCCCCcceeee
Q 011190 393 MAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCIS 472 (491)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~C~~~~~~p~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~ 472 (491)
....|.|.++|+. .+|.|+|+|+|++++|++++|+++... +...|++
T Consensus 239 ------------------------------~~~~g~~~~~C~~--~~P~i~f~fgg~~~~l~~~~~~~~~~~-~~~~C~~ 285 (323)
T 1bxo_A 239 ------------------------------DSNAGGYVFDCST--NLPDFSVSISGYTATVPGSLINYGPSG-DGSTCLG 285 (323)
T ss_dssp ------------------------------ETTTTEEEECTTC--CCCCEEEEETTEEEEECHHHHEEEECS-SSSCEEE
T ss_pred ------------------------------cCcCCEEEEECCC--CCceEEEEECCEEEEECHHHeEEeccC-CCCeEEE
Confidence 1235778999994 899999999999999999999988643 3367999
Q ss_pred ceeeccCCCCCCCeeE
Q 011190 473 GFTAMDVPPPRGPLWY 488 (491)
Q Consensus 473 ~~~~~~~~~~~~~~~~ 488 (491)
+|++.+ .++.||
T Consensus 286 ~i~~~~----~~~~~I 297 (323)
T 1bxo_A 286 GIQSNS----GIGFSI 297 (323)
T ss_dssp SEEECT----TCSSEE
T ss_pred EEECCC----CCCcEE
Confidence 998865 345676
No 28
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=7.2e-47 Score=398.35 Aligned_cols=233 Identities=28% Similarity=0.434 Sum_probs=199.5
Q ss_pred eeeeecCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCccccCCCCCCCCCCCcceecCceEEEEecCceEEE
Q 011190 80 VALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGAIAG 159 (491)
Q Consensus 80 ~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C~~~~~C~~~~~f~p~~SsT~~~~~~~~~~~Yg~gs~~G 159 (491)
.+|.+..+..|+++|+||||||+++|+|||||+++||++..| |..++.|+|++|+||+..++.|.+.|++|++.|
T Consensus 66 ~~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c-----c~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G 140 (455)
T 3lpj_A 66 DNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEG 140 (455)
T ss_dssp TCEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEE
T ss_pred ccccCCCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc-----cccCCcccCCCCCCcccCCccEEEEeCCeEEEE
Confidence 356666778999999999999999999999999999999887 566889999999999999999999999999999
Q ss_pred EEEEEEEEECc-Eeec-ccEEEEEEecCCcccccccccccccCccccccCC--CCcchHHHHHHcCCCCCCeEEEEeCCC
Q 011190 160 FFSYDSVKVGD-LVVK-DQEFIEATREPGVTFMVAKFDGILGLGFQEISVG--NAVPVWYNMVKQGLIQDPVFSFWLNRN 235 (491)
Q Consensus 160 ~~~~D~v~ig~-~~i~-~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~--~~~~~~~~L~~~g~i~~~~FSl~l~~~ 235 (491)
.+++|+|+|++ ..+. .+.|+++............++||||||++..+.. ..++++++|++|+.|+ ++||+||.+.
T Consensus 141 ~~~~Dtv~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~L~~~ 219 (455)
T 3lpj_A 141 ELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGA 219 (455)
T ss_dssp EEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCC
T ss_pred EEEEEEEEECCCcceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHccCCC-ceeEEEeccc
Confidence 99999999984 3332 3567777665432222356799999999988764 3788999999999997 9999999763
Q ss_pred CC--------CCCCeeEEECccCCCCCccceeEEeecccceeEEEEeeEEECCeeceeec---CCceEEEcCCCCccccc
Q 011190 236 QQ--------EDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCA---GGCSAIADSGTSLLAGP 304 (491)
Q Consensus 236 ~~--------~~~~G~L~fGgiD~~~~~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~---~~~~aiiDTGTt~i~lP 304 (491)
.. ....|+|+|||+|+++|.|+++|+|+.+..+|.|.+++|.|+++.+.+.. ....+||||||+++++|
T Consensus 220 ~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP 299 (455)
T 3lpj_A 220 GFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLP 299 (455)
T ss_dssp SSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTSSSEEEE
T ss_pred cccccccccccCCCceEEECCcCcccccCceEEEecCCCceeEEEEeEEEECCEEccccccccCCCeEEEECCCcceeCC
Confidence 10 22479999999999999999999999999999999999999999876432 25689999999999999
Q ss_pred HHHHHHHHHHhCCC
Q 011190 305 TTVITMINHAIGAS 318 (491)
Q Consensus 305 ~~~~~~l~~~l~a~ 318 (491)
.+++++|++++++.
T Consensus 300 ~~~~~~i~~~i~~~ 313 (455)
T 3lpj_A 300 KKVFEAAVKSIKAA 313 (455)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhh
Confidence 99999999999766
No 29
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=7.6e-46 Score=382.26 Aligned_cols=233 Identities=30% Similarity=0.478 Sum_probs=196.7
Q ss_pred eeeeecCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCccccCCCCCCCCCCCcceecCceEEEEecCceEEE
Q 011190 80 VALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGAIAG 159 (491)
Q Consensus 80 ~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C~~~~~C~~~~~f~p~~SsT~~~~~~~~~~~Yg~gs~~G 159 (491)
.+|++..+..|+++|+||||+|++.|+|||||+++||++..|. .| ++.|+|++|+||+..++.|.+.|++|+++|
T Consensus 5 ~~l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~---~~--~~~f~~~~SsT~~~~~~~~~i~Yg~Gs~~G 79 (383)
T 2ewy_A 5 DNLQGDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHS---YI--DTYFDTERSSTYRSKGFDVTVKYTQGSWTG 79 (383)
T ss_dssp TCEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBT---TB--SCCCCGGGCTTCEEEEEEEEEECSSCEEEE
T ss_pred eeccCCCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCC---cc--ccCcccccCccceeCCceEEEEECCcEEEE
Confidence 3677888899999999999999999999999999999999885 34 678999999999999999999999999999
Q ss_pred EEEEEEEEECcEe-ec-ccEEEEEEecCCcccccccccccccCccccccC--CCCcchHHHHHHcCCCCCCeEEEEeCCC
Q 011190 160 FFSYDSVKVGDLV-VK-DQEFIEATREPGVTFMVAKFDGILGLGFQEISV--GNAVPVWYNMVKQGLIQDPVFSFWLNRN 235 (491)
Q Consensus 160 ~~~~D~v~ig~~~-i~-~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~--~~~~~~~~~L~~~g~i~~~~FSl~l~~~ 235 (491)
.+++|+|+|++.. .. .+.|++.....+.......++||||||++..+. ....+++++|++|+.| +++||+||.+.
T Consensus 80 ~~~~Dtv~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q~~i-~~~FS~~l~~~ 158 (383)
T 2ewy_A 80 FVGEDLVTIPKGFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQANI-PNVFSMQMCGA 158 (383)
T ss_dssp EEEEEEEEETTTEEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHHTC-CSCEEEEECCC
T ss_pred EEEEEEEEECCCccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHHHccCC-CcceEEEeecc
Confidence 9999999998632 22 355777654433211234679999999998765 4577899999999999 79999999752
Q ss_pred -----CCCCCCeeEEECccCCCCCccceeEEeecccceeEEEEeeEEECCeeceeecC---CceEEEcCCCCcccccHHH
Q 011190 236 -----QQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAG---GCSAIADSGTSLLAGPTTV 307 (491)
Q Consensus 236 -----~~~~~~G~L~fGgiD~~~~~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~---~~~aiiDTGTt~i~lP~~~ 307 (491)
......|.|+|||+|+++|.|++.|+|+.+..+|.|.+++|.|+++.+.+... ...+||||||+++++|+++
T Consensus 159 ~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~ 238 (383)
T 2ewy_A 159 GLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQSLNLDCREYNADKAIVDSGTTLLRLPQKV 238 (383)
T ss_dssp ---------CCEEEEETSCCGGGCCSCEEEEECSSBTTBBCCEEEEEETTEECCCCTTTTTSSCEEECTTCSSEEEEHHH
T ss_pred ccccccCCCCCeEEEeCccchhhccCccEEEecCCCceEEEEEEEEEECCEEccccccccCCccEEEEcCCccccCCHHH
Confidence 11234899999999999999999999999889999999999999998754322 4689999999999999999
Q ss_pred HHHHHHHhCCC
Q 011190 308 ITMINHAIGAS 318 (491)
Q Consensus 308 ~~~l~~~l~a~ 318 (491)
+++|++++++.
T Consensus 239 ~~~l~~~i~~~ 249 (383)
T 2ewy_A 239 FDAVVEAVARA 249 (383)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHhhh
Confidence 99999999766
No 30
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=1.5e-45 Score=382.54 Aligned_cols=232 Identities=28% Similarity=0.440 Sum_probs=195.5
Q ss_pred eeeecCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCccccCCCCCCCCCCCcceecCceEEEEecCceEEEE
Q 011190 81 ALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGAIAGF 160 (491)
Q Consensus 81 ~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C~~~~~C~~~~~f~p~~SsT~~~~~~~~~~~Yg~gs~~G~ 160 (491)
.|.+..+..|+++|+||||||+++|+|||||+++||++..| |..++.|+|++|+||+..++.|.+.|++|++.|.
T Consensus 21 ~l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c-----~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 95 (402)
T 3vf3_A 21 NLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGE 95 (402)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred eccCCCCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC-----CcccCCcCcccCcccccCCCEEEEEECcEEEEEE
Confidence 34455578999999999999999999999999999999987 5668899999999999999999999999999999
Q ss_pred EEEEEEEEC-cEeecc-cEEEEEEecCCcccccccccccccCccccccCC--CCcchHHHHHHcCCCCCCeEEEEeCCCC
Q 011190 161 FSYDSVKVG-DLVVKD-QEFIEATREPGVTFMVAKFDGILGLGFQEISVG--NAVPVWYNMVKQGLIQDPVFSFWLNRNQ 236 (491)
Q Consensus 161 ~~~D~v~ig-~~~i~~-~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~--~~~~~~~~L~~~g~i~~~~FSl~l~~~~ 236 (491)
+++|+|+|+ +..+.. +.|+++............++||||||++..+.. ..++++++|++|+.|+ ++||+||.+..
T Consensus 96 ~~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~l~~~~ 174 (402)
T 3vf3_A 96 LGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAG 174 (402)
T ss_dssp EEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCC
T ss_pred EEEEEEEECCccccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHHccCCc-cceEEEeeccc
Confidence 999999998 444443 346666654432222456799999999988764 3788999999999997 99999997531
Q ss_pred -----C---CCCCeeEEECccCCCCCccceeEEeecccceeEEEEeeEEECCeeceeec---CCceEEEcCCCCcccccH
Q 011190 237 -----Q---EDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCA---GGCSAIADSGTSLLAGPT 305 (491)
Q Consensus 237 -----~---~~~~G~L~fGgiD~~~~~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~---~~~~aiiDTGTt~i~lP~ 305 (491)
. ....|.|+|||+|+++|.|+++|+|+.+..+|.|.+++|.|+++.+.+.. ....++|||||+++++|.
T Consensus 175 ~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~ 254 (402)
T 3vf3_A 175 FPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPK 254 (402)
T ss_dssp -------------EEEEESSCCGGGEEEEEEEEECSSBTTBEECEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEH
T ss_pred ccccccccccCCCCEEEeCCcCcccccCceEEEeCCcCcEEEEEEeEEEECCEEecccccccCCCeEEEECCCCcccCCH
Confidence 0 23479999999999999999999999999999999999999999876432 256899999999999999
Q ss_pred HHHHHHHHHhCCC
Q 011190 306 TVITMINHAIGAS 318 (491)
Q Consensus 306 ~~~~~l~~~l~a~ 318 (491)
+++++|++++++.
T Consensus 255 ~~~~~i~~~i~~~ 267 (402)
T 3vf3_A 255 KVFEAAVKSIKAA 267 (402)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhh
Confidence 9999999999766
No 31
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=2.5e-45 Score=379.87 Aligned_cols=231 Identities=29% Similarity=0.443 Sum_probs=196.1
Q ss_pred eeeecCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCccccCCCCCCCCCCCcceecCceEEEEecCceEEEE
Q 011190 81 ALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGAIAGF 160 (491)
Q Consensus 81 ~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C~~~~~C~~~~~f~p~~SsT~~~~~~~~~~~Yg~gs~~G~ 160 (491)
+|.+..+..|+++|+||||+|++.|+|||||+++||++..|. .| ++.|+|++|+||+..++.|.+.|++|+++|.
T Consensus 14 ~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~---~~--~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 88 (395)
T 2qp8_A 14 NLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHP---FL--HRYYQRQLSSTYRDLRKGVYVPYTQGKWEGE 88 (395)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCT---TC--SCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred ecCCCCCceEEEEEEecCCCceEEEEEecCCCceEEECCCCc---cc--cCCcCcccCCCceeCCceEEEEECCcEEEEE
Confidence 566667889999999999999999999999999999999885 33 6889999999999999999999999999999
Q ss_pred EEEEEEEEC-cEeec-ccEEEEEEecCCcccc-cccccccccCccccccCC--CCcchHHHHHHcCCCCCCeEEEEeCCC
Q 011190 161 FSYDSVKVG-DLVVK-DQEFIEATREPGVTFM-VAKFDGILGLGFQEISVG--NAVPVWYNMVKQGLIQDPVFSFWLNRN 235 (491)
Q Consensus 161 ~~~D~v~ig-~~~i~-~~~fg~~~~~~~~~~~-~~~~~GIlGLg~~~~s~~--~~~~~~~~L~~~g~i~~~~FSl~l~~~ 235 (491)
+++|+|+++ +..+. .+.|++...... .|. ...++||||||++..+.. ...+++++|++|+.|+ ++||+||.+.
T Consensus 89 ~~~Dtv~ig~g~~~~~~~~~~~~~~~~~-~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~q~~i~-~~FS~~L~~~ 166 (395)
T 2qp8_A 89 LGTDLVSIPHGPNVTVRANIAAITESDK-FFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGA 166 (395)
T ss_dssp EEEEEEECTTSCSCEEEEEEEEEEEEES-CSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCC
T ss_pred EEeEEEEECCCCCceEEEEEEEEEccCc-ccccccCccceEEcCchhhccCCCCCCCHHHHHHHccCCc-ceEEEEeccc
Confidence 999999998 55444 255676654332 232 346799999999987653 5778999999999997 8999999863
Q ss_pred C--------CCCCCeeEEECccCCCCCccceeEEeecccceeEEEEeeEEECCeeceeec---CCceEEEcCCCCccccc
Q 011190 236 Q--------QEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCA---GGCSAIADSGTSLLAGP 304 (491)
Q Consensus 236 ~--------~~~~~G~L~fGgiD~~~~~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~---~~~~aiiDTGTt~i~lP 304 (491)
. .....|+|+|||+|+++|.|++.|+|+.+..+|.|.+++|.|+++.+.+.. ....+||||||+++++|
T Consensus 167 ~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP 246 (395)
T 2qp8_A 167 GFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLP 246 (395)
T ss_dssp SSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEE
T ss_pred cccccccccccCCCcEEEECCcCcccccCceEEeccCCCceEEEEEEEEEECCEEcccCccccCCceEEEEcCCCcEecC
Confidence 1 012479999999999999999999999988999999999999998875422 24679999999999999
Q ss_pred HHHHHHHHHHhCCC
Q 011190 305 TTVITMINHAIGAS 318 (491)
Q Consensus 305 ~~~~~~l~~~l~a~ 318 (491)
++++++|++++++.
T Consensus 247 ~~~~~~l~~~i~~~ 260 (395)
T 2qp8_A 247 KKVFEAAVKSIKAA 260 (395)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999999765
No 32
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=1.1e-44 Score=376.01 Aligned_cols=298 Identities=16% Similarity=0.221 Sum_probs=233.2
Q ss_pred cceeeee-ecCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCC-----------CCCCCccccCCCCC------CCCCC
Q 011190 77 TDIVALK-NYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPST-----------NCYFSVACYFHSKY------KSSQS 138 (491)
Q Consensus 77 ~~~~~l~-n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~-----------~C~~~~~C~~~~~f------~p~~S 138 (491)
...+||. |+.+.+|+++|.||||||++.|+|||||+++||+|. .|. +..|..++.| ++..|
T Consensus 9 ~~~~pl~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~~~Sst~~~~~C~-s~~C~~~~~~~c~~c~~~~~s 87 (403)
T 3aup_A 9 LVVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCH-STQCSRANTHQCLSCPAASRP 87 (403)
T ss_dssp CEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSCCCCSSCBCCCTT-BHHHHHTTCCCEEECSSSCBT
T ss_pred cEEEeeecCCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCCCCCCCCCccCCC-CccccCccccCccccCCCCCC
Confidence 3468999 888999999999999999999999999999999999 664 4568777778 55554
Q ss_pred CcceecCceEEEEec-Cce-EEEEEEEEEEEECc-----------EeecccEEEEEEecCCcccccccccccccCccccc
Q 011190 139 STYKKNGESASIQYG-TGA-IAGFFSYDSVKVGD-----------LVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEI 205 (491)
Q Consensus 139 sT~~~~~~~~~~~Yg-~gs-~~G~~~~D~v~ig~-----------~~i~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~ 205 (491)
+ +....+.|.+.|+ +|+ +.|.+++|+|+||+ ..++++.||++.......+....++||||||++.+
T Consensus 88 ~-~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~ 166 (403)
T 3aup_A 88 G-CHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPI 166 (403)
T ss_dssp T-BCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEEECSSSTT
T ss_pred C-CCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCCceEEECCCCCc
Confidence 3 4556789999998 555 89999999999988 88999999999876322133457899999999876
Q ss_pred cCCCCcchHHHHHHcCCCCCCeEEEEeCCCCCCCCCeeEEECccCCCCC--c-c-----ceeEEeeccc--ceeEEEEee
Q 011190 206 SVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHY--K-G-----KHTYVPVTQK--GYWQFNMGD 275 (491)
Q Consensus 206 s~~~~~~~~~~L~~~g~i~~~~FSl~l~~~~~~~~~G~L~fGgiD~~~~--~-G-----~l~~~pv~~~--~~w~v~l~~ 275 (491)
+ +..+|. ++.+.+++||+||.+.. ...|.|+||| |+++| . | ++.|+|+... ++|.|.+++
T Consensus 167 s------~~~ql~-~~~~~~~~FS~~L~~~~--~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l~~ 236 (403)
T 3aup_A 167 S------LPNQLA-SHFGLQRQFTTCLSRYP--TSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNS 236 (403)
T ss_dssp S------HHHHHH-HHHTCCSEEEEECCSCT--TSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEEECEEE
T ss_pred C------HHHHHH-hhcCCCCeEEEEcCCCC--CCCeeEEECC-CchhccccccccccCceeecccccCCCCcceEEEEE
Confidence 5 556664 55577899999998752 2379999999 99888 6 6 9999999765 899999999
Q ss_pred EEECCeec-eeecC--------CceEEEcCCCCcccccHHHHHHHHHHhCCCceeecccchhhhccchhhhhhhhhccCc
Q 011190 276 VLIGGKPT-GYCAG--------GCSAIADSGTSLLAGPTTVITMINHAIGASGVVSQQCKAVVEQYGQTILDLLLFEAHP 346 (491)
Q Consensus 276 i~vgg~~~-~~~~~--------~~~aiiDTGTt~i~lP~~~~~~l~~~l~a~~~~~~~C~~~~~~~g~~~i~~~~~~~~~ 346 (491)
|.|+++.+ ..... ...+||||||+++++|++++++|++++.+.- +. +
T Consensus 237 i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~-------------~~----~------- 292 (403)
T 3aup_A 237 IRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQL-------------PK----Q------- 292 (403)
T ss_dssp EEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTS-------------CG----G-------
T ss_pred EEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHh-------------cc----c-------
Confidence 99999877 43221 2359999999999999999999999994330 00 0
Q ss_pred ccccccCcccccCCCccccccccccccccCccccCccCcccchhhHHHHHHHHHHhhhchhHHHHHHHHHhhhccC-CCC
Q 011190 347 KKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRM-PSP 425 (491)
Q Consensus 347 ~~~~~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 425 (491)
.+. +..
T Consensus 293 -------------------------------------------------------------------------~~~~~~~ 299 (403)
T 3aup_A 293 -------------------------------------------------------------------------AQVKSVA 299 (403)
T ss_dssp -------------------------------------------------------------------------GEECCCT
T ss_pred -------------------------------------------------------------------------cccCCCC
Confidence 000 011
Q ss_pred CCceeecCcCCCCCCcEEEEECC---EEEeeCcCccEEEeCCCCcceeeeceeeccCCCCCCCeeE
Q 011190 426 MGESAVDCGKLSSMPIVSFTIGG---KVFDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRGPLWY 488 (491)
Q Consensus 426 ~g~~~~~C~~~~~~p~i~f~~~g---~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~~ 488 (491)
...|.++|+.+..+|.|+|+|+| ++|+|+|++|+++..+ ...|+ +|+..+.+ .++.||
T Consensus 300 ~~~~c~~c~~~~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~--~~~C~-~~~~~~~~--~~~~~I 360 (403)
T 3aup_A 300 PFGLCFNSNKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQP--GVTCL-GVMNGGMQ--PRAEIT 360 (403)
T ss_dssp TCSCEECGGGCCCCCCEEEEESSTTCCEEEECHHHHEEEC-----CEEE-CEEECCSC--CSSSEE
T ss_pred CCCceEECCCcCcCCcEEEEEcCCCceEEEEcccceEEEcCC--CeEEE-EEEcCCCC--CCCcEE
Confidence 23467899988899999999987 4999999999998653 36899 99987753 245776
No 33
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=2.4e-44 Score=373.90 Aligned_cols=233 Identities=18% Similarity=0.190 Sum_probs=190.6
Q ss_pred Ccceeeeee-cCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCC----------CCccccCCCCCCCCC-----CC
Q 011190 76 DTDIVALKN-YMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCY----------FSVACYFHSKYKSSQ-----SS 139 (491)
Q Consensus 76 ~~~~~~l~n-~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C~----------~~~~C~~~~~f~p~~-----Ss 139 (491)
....+|++. ..+++|+++|+||||||++.|++||||+++||+|..|. .+..|..++.|++.. ++
T Consensus 7 ~~~~~pv~~d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c~~Sst~~~v~C~s~~C~~~~~~~~~~c~s~~~~ 86 (413)
T 3vla_A 7 SALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRPVRCRTSQCSLSGSIACGDCFNGPRP 86 (413)
T ss_dssp SEEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSSCCCTTCEECBTTSHHHHHTTCCEEECCSSCCBT
T ss_pred ccEEEEeeecCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCCCCCCCcCccCCCcccccccccCCCcccccCCCC
Confidence 445577774 45789999999999999999999999999999996542 145677778887642 34
Q ss_pred cceecCceEEEEec-Cce-EEEEEEEEEEEEC---------cEeecccEEEEEEecCCcccccccccccccCccccccCC
Q 011190 140 TYKKNGESASIQYG-TGA-IAGFFSYDSVKVG---------DLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVG 208 (491)
Q Consensus 140 T~~~~~~~~~~~Yg-~gs-~~G~~~~D~v~ig---------~~~i~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~ 208 (491)
++....|.|.+.|+ +|+ +.|.+++|+|+|+ +..++++.|||+....... ....++||||||++.++
T Consensus 87 ~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g-~~~~~dGIlGLg~~~lS-- 163 (413)
T 3vla_A 87 GCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQN-LASGVVGMAGLGRTRIA-- 163 (413)
T ss_dssp TBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTT-SCTTCCEEEECSSSSSS--
T ss_pred CCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccC-cccccccccccCCCCcc--
Confidence 56666799999995 655 7899999999997 3688899999998753211 23567999999998876
Q ss_pred CCcchHHHHHHcCCCCCCeEEEEeCCCCCCCCCeeEEECccCCCC-----Cccc-eeEEeeccc--------------ce
Q 011190 209 NAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNH-----YKGK-HTYVPVTQK--------------GY 268 (491)
Q Consensus 209 ~~~~~~~~L~~~g~i~~~~FSl~l~~~~~~~~~G~L~fGgiD~~~-----~~G~-l~~~pv~~~--------------~~ 268 (491)
+..+|.+++.+ +++||+||.+.. ..+|.|+|||+|..+ |.|+ ++|+|+..+ .+
T Consensus 164 ----l~sql~~~~~i-~~~FS~cL~~~~--~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~ 236 (413)
T 3vla_A 164 ----LPSQFASAFSF-KRKFAMCLSGST--SSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVE 236 (413)
T ss_dssp ----HHHHHHHHHTC-CSEEEEECCSCS--SSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCS
T ss_pred ----hHHHHhhhcCC-CceEEEeCCCCC--CCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCce
Confidence 77889999988 899999999852 247999999998753 7888 999999764 69
Q ss_pred eEEEEeeEEECCeeceeec--------CCceEEEcCCCCcccccHHHHHHHHHHhCCC
Q 011190 269 WQFNMGDVLIGGKPTGYCA--------GGCSAIADSGTSLLAGPTTVITMINHAIGAS 318 (491)
Q Consensus 269 w~v~l~~i~vgg~~~~~~~--------~~~~aiiDTGTt~i~lP~~~~~~l~~~l~a~ 318 (491)
|.|.+++|+||++.+.... +...+||||||+++++|.++|++|.++|++.
T Consensus 237 y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~ 294 (413)
T 3vla_A 237 YFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKE 294 (413)
T ss_dssp CEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHH
Confidence 9999999999999876432 3578999999999999999999999998654
No 34
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=2.5e-41 Score=348.24 Aligned_cols=222 Identities=14% Similarity=0.158 Sum_probs=175.6
Q ss_pred eeeee-ecCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCC-------CCccccCCCCCCCCCCCcce-------e
Q 011190 79 IVALK-NYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCY-------FSVACYFHSKYKSSQSSTYK-------K 143 (491)
Q Consensus 79 ~~~l~-n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C~-------~~~~C~~~~~f~p~~SsT~~-------~ 143 (491)
.+||. ++.+.+|+++|+|||| |+|||||+++||+|..|. .+..|..++.|++..+ ++. .
T Consensus 4 ~~pv~~~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~~~~~~~C~s~~C~~~~~~~~~sc-~~~~~~~~~~~ 77 (381)
T 1t6e_X 4 LAPVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAPGC-PAPSCGSDKHD 77 (381)
T ss_dssp EEEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTCCCCCCBTTSHHHHHHHSSCCTTC-CCCCC------
T ss_pred EEeEEecCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCCCCCccCCCCchhccccCCCCCCC-CCccCCcCcCC
Confidence 46887 7789999999999997 999999999999995442 1345766677877533 332 1
Q ss_pred cCc-eEEEEecCceE-EEEEEEEEEEECc----Eeeccc----EEEEEEecCCcccccccccccccCccccccCCCCcch
Q 011190 144 NGE-SASIQYGTGAI-AGFFSYDSVKVGD----LVVKDQ----EFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPV 213 (491)
Q Consensus 144 ~~~-~~~~~Yg~gs~-~G~~~~D~v~ig~----~~i~~~----~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~ 213 (491)
..| .|.+.|++|+. +|.+++|+|++++ ..++++ .|||+.......+ ...++||||||++.++ +
T Consensus 78 ~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~-~~~~dGIlGLg~~~~s------~ 150 (381)
T 1t6e_X 78 KPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASL-PRGSTGVAGLANSGLA------L 150 (381)
T ss_dssp CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTS-CTTEEEEEECSSSTTS------H
T ss_pred CccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCC-CCCCceEEEeCCCcch------h
Confidence 234 59999999995 8999999999985 466665 5699876522222 3567999999998775 6
Q ss_pred HHHHHHcCCCCCCeEEEEeCCCCCCCCCeeEEECccCCC--CCccceeEEeeccc---ceeEEEEeeEEECCeeceeecC
Q 011190 214 WYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPN--HYKGKHTYVPVTQK---GYWQFNMGDVLIGGKPTGYCAG 288 (491)
Q Consensus 214 ~~~L~~~g~i~~~~FSl~l~~~~~~~~~G~L~fGgiD~~--~~~G~l~~~pv~~~---~~w~v~l~~i~vgg~~~~~~~~ 288 (491)
..+|.++++ .+++||+||.+. ..|+|+|||+|.. +|.|++.|+|+... .+|.|.+++|+||++.+.....
T Consensus 151 ~~ql~~~~~-~~~~FS~~L~~~----~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~~ 225 (381)
T 1t6e_X 151 PAQVASAQK-VANRFLLCLPTG----GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEG 225 (381)
T ss_dssp HHHHHHHHT-CCSEEEEECCSS----SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCCTT
T ss_pred HHHHhhhcc-cCceEEEEeCCC----CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEecCCHH
Confidence 778999885 489999999875 2799999998765 58999999999753 4677999999999988764433
Q ss_pred ---CceEEEcCCCCcccccHHHHHHHHHHhCCC
Q 011190 289 ---GCSAIADSGTSLLAGPTTVITMINHAIGAS 318 (491)
Q Consensus 289 ---~~~aiiDTGTt~i~lP~~~~~~l~~~l~a~ 318 (491)
...+||||||+++++|++++++|.+++.+.
T Consensus 226 ~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~ 258 (381)
T 1t6e_X 226 ALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKA 258 (381)
T ss_dssp CSCTTCEEECSSCSSEEECHHHHHHHHHHHHHH
T ss_pred HccCCCEEEECCCccEEeCHHHHHHHHHHHHHh
Confidence 357999999999999999999999988654
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=3.8e-36 Score=290.26 Aligned_cols=215 Identities=45% Similarity=0.898 Sum_probs=188.8
Q ss_pred CcEeecccEEEEEEecCCcccccccccccccCccccccCCCCcchHHHHHHcCCCCCCeEEEEeCCCCCCCCCeeEEECc
Q 011190 169 GDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGG 248 (491)
Q Consensus 169 g~~~i~~~~fg~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~~~~~~~~L~~~g~i~~~~FSl~l~~~~~~~~~G~L~fGg 248 (491)
|++++++|.||+++..++..|....++||||||++..+.....+++++|++||+|++++||+||.+..+....|+|+|||
T Consensus 1 gg~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg 80 (241)
T 1lya_B 1 GGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGG 80 (241)
T ss_dssp CCEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETS
T ss_pred CCeEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECC
Confidence 57889999999999876655666778999999999888777788999999999999999999999874333479999999
Q ss_pred cCCCCCccceeEEeecccceeEEEEeeEEECCeeceeecCCceEEEcCCCCcccccHHHHHHHHHHhCCCceeecccchh
Q 011190 249 VDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAIGASGVVSQQCKAV 328 (491)
Q Consensus 249 iD~~~~~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l~a~~~~~~~C~~~ 328 (491)
+|+++|.|+++|+|+.+.++|.|.+++|+|+++.+. +.....+++||||+++++|.+++++|++++++..
T Consensus 81 ~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~--------- 150 (241)
T 1lya_B 81 TDSKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLTL-CKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVP--------- 150 (241)
T ss_dssp CCGGGEEEEEEEEECSSBTTBEEEEEEEEETTSCEE-STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE---------
T ss_pred cCHHHcCCceEEEECccccEEEEEEeEEEECCeeEe-ccCCCEEEEECCCccccCCHHHHHHHHHHhCCee---------
Confidence 999999999999999999999999999999998752 4567899999999999999999999999997761
Q ss_pred hhccchhhhhhhhhccCcccccccCcccccCCCccccccccccccccCccccCccCcccchhhHHHHHHHHHHhhhchhH
Q 011190 329 VEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAVVWMQNQLQQNQTQ 408 (491)
Q Consensus 329 ~~~~g~~~i~~~~~~~~~~~~~~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (491)
T Consensus 151 -------------------------------------------------------------------------------- 150 (241)
T 1lya_B 151 -------------------------------------------------------------------------------- 150 (241)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhhhccCCCCCCceeecCcCCCCCCcEEEEECCEEEeeCcCccEEEeCCCCcceeeeceeeccCCCCCCCeeE
Q 011190 409 ENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRGPLWY 488 (491)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~g~~~~~C~~~~~~p~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~~ 488 (491)
...|.|.++|+....+|+|+|+|+|++++|+|++|+++....+...|+++|++.+.|.+.++.||
T Consensus 151 ---------------~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~i 215 (241)
T 1lya_B 151 ---------------LIQGEYMIPCEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWI 215 (241)
T ss_dssp ---------------EETTEEEEEGGGGGGSCCEEEEETTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEE
T ss_pred ---------------ccCCcEEEECCCCccCCeEEEEECCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEE
Confidence 12467899999888999999999999999999999999865445789999999998766777887
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.89 E-value=2e-23 Score=171.86 Aligned_cols=93 Identities=63% Similarity=1.089 Sum_probs=86.9
Q ss_pred ceeeeeecCCceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCC-CccccCCCCCCCCCCCcceecCceEEEEecCce
Q 011190 78 DIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYF-SVACYFHSKYKSSQSSTYKKNGESASIQYGTGA 156 (491)
Q Consensus 78 ~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C~~-~~~C~~~~~f~p~~SsT~~~~~~~~~~~Yg~gs 156 (491)
..+||.|+.+.+|+++|.||||||++.|+|||||+++||++..|.. ...|..++.|+|++|+||+..++.|.+.|++|+
T Consensus 3 ~~~~l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~~~y~p~~SsT~~~~~~~~~i~Yg~Gs 82 (97)
T 1lya_A 3 IPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGS 82 (97)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCE
T ss_pred ceEeeEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCCCCCCCchhCCCceeCCCcEEEEECCcE
Confidence 3589999999999999999999999999999999999999999952 247988999999999999999999999999999
Q ss_pred EEEEEEEEEEEECc
Q 011190 157 IAGFFSYDSVKVGD 170 (491)
Q Consensus 157 ~~G~~~~D~v~ig~ 170 (491)
+.|.+++|+|+|++
T Consensus 83 ~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 83 LSGYLSQDTVSVPC 96 (97)
T ss_dssp EEEEEEEEEEEESC
T ss_pred EEEEEEEEEEEECC
Confidence 99999999999986
No 37
>3rfi_A Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuberosum}
Probab=99.67 E-value=9.7e-18 Score=140.36 Aligned_cols=107 Identities=50% Similarity=0.937 Sum_probs=77.9
Q ss_pred CCCceeecccchhhhccchhhhhhhhhccCcccccccCcccccCCCccccccccccccccCccccCccCcccchhhHHHH
Q 011190 316 GASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAV 395 (491)
Q Consensus 316 ~a~~~~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (491)
||.|.++..|+.++.+||+.+|++++++.+|..+|+.+|+|..+++...++....++++.+..++ ..++.+|.+|+|++
T Consensus 2 ~a~g~~~~~C~~~V~~Y~~~ii~~l~~~~~P~~iC~~lglC~~~~~~~~~~~i~~vv~~~~~~~~-~~~~~~C~~Ce~~V 80 (108)
T 3rfi_A 2 SAMAIVSMECKTIVSQYGEMIWDLLVSGVRPDQVCSQAGLCFVDGAQHVSSNIKTVVERETEGSS-VGEAPLCTACEMAV 80 (108)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHTTSSCC-------------------------CCHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHcCCcCCCccccccccccccccccccccc-CCCCCcChhHHHHH
Confidence 45677888999999999999999999999999999999999998876666666666655433222 24899999999999
Q ss_pred HHHHHHhhhchhHHHHHHHHHhhhccCC
Q 011190 396 VWMQNQLQQNQTQENILQYVNELCDRMP 423 (491)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (491)
+|++++|.+|.|+++|+++|+++|+++|
T Consensus 81 ~~ie~~L~~N~Te~eI~~~l~k~C~~LP 108 (108)
T 3rfi_A 81 VWMQNQLKQEGTKEKVLEYVNQLCEKIP 108 (108)
T ss_dssp HHHHHHHTSHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhcCchHHHHHHHHHHHHhhCc
Confidence 9999999999999999999999999987
No 38
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.10 E-value=6.6e-11 Score=94.92 Aligned_cols=62 Identities=68% Similarity=1.114 Sum_probs=54.9
Q ss_pred CceeecCcCCCCCCcEEEEECCEEEeeCcCccEEEeCCCCcceeeeceeeccCCCCCCCeeEE
Q 011190 427 GESAVDCGKLSSMPIVSFTIGGKVFDLSPEEYILKVGEGPEAQCISGFTAMDVPPPRGPLWYS 489 (491)
Q Consensus 427 g~~~~~C~~~~~~p~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~ 489 (491)
|.|.+||+.++++|+|+|+|+|++|+|+|++|+++...++...|+++|+++|.+ +.++.||-
T Consensus 1 G~y~v~C~~~~~~P~i~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~-~~~~~~IL 62 (87)
T 1b5f_B 1 EELQVDCNTLSSMPNVSFTIGGKKFGLTPEQYILKVGKGEATQCISGFTAMDAT-LLGPLWIL 62 (87)
T ss_dssp CCCEECGGGGGGCCCEEEEETTEEEEECHHHHEEEESCTTTCEEEESEEECCCB-SSSBEEEE
T ss_pred CcEEEECCCCCcCCcEEEEECCEEEEECHHHhEEEccCCCCCEEEEEEEECCCC-CCCCeEEe
Confidence 679999999889999999999999999999999997655457899999999987 56788983
No 39
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=97.94 E-value=4.1e-06 Score=67.29 Aligned_cols=50 Identities=22% Similarity=0.676 Sum_probs=43.9
Q ss_pred cCcccchhhHHHHHHHHHHhhhchhHHHHHHHHHhhhccCCCCCCceeecCcC
Q 011190 383 LNNAMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGK 435 (491)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~C~~ 435 (491)
.++..|.+|++++.++++++.+|.|+++|.+.++++|+++|... ...|..
T Consensus 3 ~~~~~C~~C~~vv~~i~~~l~~n~t~~~I~~~l~~~C~~lp~~~---~~~C~~ 52 (91)
T 2qyp_A 3 VSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSL---SEECQE 52 (91)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHTSCSST---TTTHHH
T ss_pred CCCCcchHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHCCCCc---ccchHH
Confidence 46789999999999999999999999999999999999999753 337764
No 40
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=97.84 E-value=1e-05 Score=63.15 Aligned_cols=48 Identities=25% Similarity=0.651 Sum_probs=43.0
Q ss_pred cccchhhHHHHHHHHHHhhhchhHHHHHHHHHhhhccCCCCCCceeecCcC
Q 011190 385 NAMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGK 435 (491)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~C~~ 435 (491)
+..|.+|++++.++++++.+|.|+++|.+.++++|+++|.+ +...|..
T Consensus 2 ~~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~~---~~~~C~~ 49 (80)
T 3bqp_A 2 GGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDP---YQKQCDQ 49 (80)
T ss_dssp CTTHHHHHHHHHHHHHHSCTTCCHHHHHHHHHHHGGGSCGG---GHHHHHH
T ss_pred cCcchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCCCc---cchhhHH
Confidence 57899999999999999999999999999999999999963 4557763
No 41
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=97.82 E-value=1.1e-05 Score=62.08 Aligned_cols=40 Identities=15% Similarity=0.223 Sum_probs=37.2
Q ss_pred cccchhhHHHHHHHHHHhhhchhHHHHHHHHHhhhccCCCC
Q 011190 385 NAMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPSP 425 (491)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (491)
+..|.+|+|++..+++++ +|.|+++|...++++|+++|.+
T Consensus 1 ~~~C~~C~~~v~~le~~l-~n~Te~~I~~~L~~vC~~l~~~ 40 (74)
T 1l9l_A 1 GRDYRTCLTIVQKLKKMV-DKPTQRSVSNAATRVCRTGRSR 40 (74)
T ss_dssp CHHHHHHHHHHHHHHHHC-SSCCHHHHHHHHHHGGGSSCHH
T ss_pred CCCChHHHHHHHHHHHHh-cccCHHHHHHHHHHHHHhCChH
Confidence 357999999999999999 9999999999999999999853
No 42
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=97.76 E-value=1.9e-05 Score=62.22 Aligned_cols=41 Identities=34% Similarity=0.699 Sum_probs=38.8
Q ss_pred cccchhhHHHHHHHHHHhhhchhHHHHHHHHHhhhccCCCC
Q 011190 385 NAMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPSP 425 (491)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (491)
+..|.+|++++.++++++.+|.|+++|++.++++|+++|..
T Consensus 3 ~~~C~~C~~~v~~~~~~l~~n~t~~~I~~~l~~~C~~lp~~ 43 (83)
T 4ddj_A 3 SLPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKP 43 (83)
T ss_dssp CHHHHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHTTSCTT
T ss_pred CCcchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHhCCCc
Confidence 56799999999999999999999999999999999999864
No 43
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=97.57 E-value=5e-05 Score=59.69 Aligned_cols=49 Identities=22% Similarity=0.609 Sum_probs=41.8
Q ss_pred cCcccchhhHHHHHHHHHHhhhchhHHHHHHHHHhhhccCCCCCCceeecCc
Q 011190 383 LNNAMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCG 434 (491)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~C~ 434 (491)
.++..|.+|++++.++++++.+|.|+++|.+.++++|+++|.. +.-.|.
T Consensus 2 ~~~~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~~---~~~~C~ 50 (83)
T 2gtg_A 2 DSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKS---LSEECQ 50 (83)
T ss_dssp --CCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTSSCHH---HHHHHH
T ss_pred CCCCcChhHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHCCCc---chhHHH
Confidence 4678999999999999999999999999999999999999853 333565
No 44
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=97.55 E-value=4e-05 Score=59.59 Aligned_cols=46 Identities=13% Similarity=0.429 Sum_probs=40.7
Q ss_pred cccchhhHHHHHHHHHHhhhchhHHHHHHHHHhhhccCCCCCCceeecCc
Q 011190 385 NAMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCG 434 (491)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~C~ 434 (491)
+..|.+|++++..+++++.+|.|+++|++.|+++|+++|. +.-.|.
T Consensus 1 g~~C~~C~~iv~~ve~~l~~~~t~~~I~~~l~~~C~~lp~----~~~~C~ 46 (78)
T 1nkl_A 1 GYFCESCRKIIQKLEDMVGPQPNEDTVTQAASQVCDKLKI----LRGLCK 46 (78)
T ss_dssp CCHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHSCS----THHHHH
T ss_pred CCcchHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhhCch----hHHHHH
Confidence 3579999999999999999999999999999999999985 333565
No 45
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=97.55 E-value=4.3e-05 Score=59.23 Aligned_cols=47 Identities=19% Similarity=0.527 Sum_probs=40.9
Q ss_pred CcccchhhHHHHHHHHHHhhhchhHHHHHHHHHhhhccCCCCCCceeecCc
Q 011190 384 NNAMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCG 434 (491)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~C~ 434 (491)
++..|.+|++++..+++++.+| |+++|+++++++|+++|.+. .-.|.
T Consensus 1 ~~~~C~~C~~vv~~ve~~l~~n-t~~~I~~~l~~~C~~lp~~~---~~~C~ 47 (77)
T 1of9_A 1 GEILCNLCTGLINTLENLLTTK-GADKVKDYISSLCNKASGFI---ATLCT 47 (77)
T ss_dssp CCSSHHHHHHHHHHHHHHCSSS-CSHHHHHHHHHHHTTCSSTT---HHHHH
T ss_pred CCCcchhHHHHHHHHHHHHHHC-cHHHHHHHHHHHHHcCChHH---HHHHH
Confidence 3568999999999999999999 99999999999999998653 33565
No 46
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=97.34 E-value=0.00015 Score=56.76 Aligned_cols=48 Identities=27% Similarity=0.483 Sum_probs=41.7
Q ss_pred CcccchhhHHHHHHHHHHhhhchhH-HHHHHHHHhhhccCCCCCCceeecCc
Q 011190 384 NNAMCSACEMAVVWMQNQLQQNQTQ-ENILQYVNELCDRMPSPMGESAVDCG 434 (491)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~C~ 434 (491)
++..|..|++++..+++.+.+|.|+ ++|.+.++++|+++|.. +.-.|.
T Consensus 2 ~~~~C~~C~~~V~~ve~~l~~n~t~~~~I~~~l~~~C~~lp~~---~~~~C~ 50 (81)
T 1n69_A 2 DGDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPG---MADICK 50 (81)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHGGGGCTT---HHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHcCcH---HHHHHH
Confidence 4678999999999999999999999 99999999999999954 333665
No 47
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=97.25 E-value=5e-05 Score=61.73 Aligned_cols=52 Identities=13% Similarity=0.305 Sum_probs=45.0
Q ss_pred ccCcccchhhHHHHHHHHHHhhhchhHHHHHHHHHhhhccCCCCCCceeecCcC
Q 011190 382 VLNNAMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGK 435 (491)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~C~~ 435 (491)
..++..|.+|++++..+++.+ |.|+++|++.|+++|+++|.+...+.-.|..
T Consensus 18 ~~~~~~C~~C~~vV~~ve~~l--n~t~~~I~~~L~~~C~~lp~~ipf~~~~C~~ 69 (99)
T 2js9_A 18 GRSALSCQMCELVVKKYEGSA--DKDANVIKKDFDAECKKLFHTIPFGTRECDH 69 (99)
T ss_dssp -CCSSTHHHHHHHHHHHTTTS--SCCHHHHHHHHHHHHHTGGGGSTTHHHHHHT
T ss_pred CCCCCcchhHHHHHHHHHHHH--HhhHHHHHHHHHHHHHcCCCcchHHHHHHHH
Confidence 567899999999999999999 8899999999999999999654445668875
No 48
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=94.01 E-value=0.06 Score=46.56 Aligned_cols=90 Identities=18% Similarity=0.223 Sum_probs=52.3
Q ss_pred CceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCccccCCCCCCCCCCCcceecCceEEEEecCce--EEEEEEEE
Q 011190 87 DAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGA--IAGFFSYD 164 (491)
Q Consensus 87 ~~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C~~~~~C~~~~~f~p~~SsT~~~~~~~~~~~Yg~gs--~~G~~~~D 164 (491)
...+++++.|+ ++++++++|||++.+.+...... .+.-....+. .+. ....|.|. ..|....+
T Consensus 24 ~~~~~v~v~In--G~~~~~LvDTGAs~s~is~~~a~---~lgl~~~~~~----~~~------~~a~g~g~~~~~~~~~~~ 88 (148)
T 2i1a_A 24 VPMLYINIEIN--NYPVKAFVDTGAQTTIMSTRLAK---KTGLSRMIDK----RFI------GEARGVGTGKIIGRIHQA 88 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEHHHHH---HHTGGGGCBC----CCC-----------------CEEEEEE
T ss_pred cceEEEEEEEC--CEEEEEEEECCCCccccCHHHHH---HcCCCccCCc----ceE------EEEecCCCcccccEEEEE
Confidence 56789999998 68999999999999888532111 1110011111 110 01122222 24666678
Q ss_pred EEEECcEeecccEEEEEEecCCcccccccccccccCc
Q 011190 165 SVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLG 201 (491)
Q Consensus 165 ~v~ig~~~i~~~~fg~~~~~~~~~~~~~~~~GIlGLg 201 (491)
.+.+|+...+ ..|.+.. . ..+||||+-
T Consensus 89 ~i~ig~~~~~-~~~~vl~--~-------~~d~iLG~d 115 (148)
T 2i1a_A 89 QVKIETQYIP-CSFTVLD--T-------DIDVLIGLD 115 (148)
T ss_dssp EEEETTEEEE-EEEEEEC--S-------SCSEEECHH
T ss_pred EEEECCEEec-eeEEEec--C-------CCCeEecHH
Confidence 9999998764 5555543 1 248999985
No 49
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=93.81 E-value=0.016 Score=46.00 Aligned_cols=40 Identities=40% Similarity=0.830 Sum_probs=34.7
Q ss_pred eecccchhhhccchhhhhhhhhccCcccccccCcccccCC
Q 011190 321 VSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDG 360 (491)
Q Consensus 321 ~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C~~~~ 360 (491)
+...|+.++..|++.+|++.....+|..+|..+|+|..+.
T Consensus 46 ~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~~~~ 85 (91)
T 2qyp_A 46 LSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTR 85 (91)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHTCCHHHHHHTTTCC----
T ss_pred cccchHHHHHHHHHHHHHHHHHcCCHHHHHhhcCCCCCcc
Confidence 6788999999999999999999999999999999998754
No 50
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=92.58 E-value=0.028 Score=43.13 Aligned_cols=37 Identities=24% Similarity=0.683 Sum_probs=35.1
Q ss_pred eecccchhhhccchhhhhhhhhccCcccccccCcccc
Q 011190 321 VSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCT 357 (491)
Q Consensus 321 ~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C~ 357 (491)
+...|+.++..||+.++++.....+|..+|..+|+|.
T Consensus 43 ~~~~C~~~v~~y~~~ii~~l~~~~~P~~iC~~l~~C~ 79 (80)
T 3bqp_A 43 YQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACP 79 (80)
T ss_dssp GHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHTTSSC
T ss_pred cchhhHHHHHHHHHHHHHHHHHCCCHHHHHhhcCCCC
Confidence 6778999999999999999999999999999999995
No 51
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=90.65 E-value=0.065 Score=41.11 Aligned_cols=37 Identities=22% Similarity=0.516 Sum_probs=35.2
Q ss_pred eecccchhhhccchhhhhhhhhccCcccccccCcccc
Q 011190 321 VSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCT 357 (491)
Q Consensus 321 ~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C~ 357 (491)
+...|+.++.+|++.+|+....+.+|+.+|..+|+|.
T Consensus 41 ~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC~ 77 (78)
T 1nkl_A 41 LRGLCKKIMRSFLRRISWDILTGKKPQAICVDIKICK 77 (78)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTCSC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHCCCHHHHHhccCCCC
Confidence 6778999999999999999999999999999999995
No 52
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=90.42 E-value=0.039 Score=42.28 Aligned_cols=36 Identities=17% Similarity=0.459 Sum_probs=34.4
Q ss_pred eecccchhhhccchhhhhhhhhccCcccccccCccc
Q 011190 321 VSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLC 356 (491)
Q Consensus 321 ~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C 356 (491)
+...|+.++.+|++.+|++...+.+|+.+|..+|+|
T Consensus 42 ~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC 77 (77)
T 1of9_A 42 IATLCTKVLDFGIDKLIQLIEDKVDANAICAKIHAC 77 (77)
T ss_dssp THHHHHHHHHHCHHHHHHHHHHTCCHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCC
Confidence 677899999999999999999999999999999998
No 53
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=90.37 E-value=0.032 Score=43.26 Aligned_cols=37 Identities=43% Similarity=0.952 Sum_probs=34.8
Q ss_pred eecccchhhhccchhhhhhhhhccCcccccccCcccc
Q 011190 321 VSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCT 357 (491)
Q Consensus 321 ~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C~ 357 (491)
+...|+.++..|++.++++...+.+|..+|..+|+|.
T Consensus 45 ~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~ 81 (83)
T 2gtg_A 45 LSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCS 81 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTSCC
T ss_pred chhHHHHHHHHHHHHHHHHHHHCCCHHHHHHhcCCCC
Confidence 5678999999999999999999999999999999996
No 54
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=90.23 E-value=0.045 Score=44.13 Aligned_cols=37 Identities=22% Similarity=0.468 Sum_probs=34.9
Q ss_pred eecccchhhhccchhhhhhhhhccCcccccccCcccc
Q 011190 321 VSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCT 357 (491)
Q Consensus 321 ~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C~ 357 (491)
+...|+.++.+|++.+|+++..+.+|+.+|..+|+|.
T Consensus 63 ~~~~C~~~V~~y~~~II~~L~~~~~P~~VC~~L~lC~ 99 (99)
T 2js9_A 63 GTRECDHYVNSKVDPIIHELEGGTAPKDVCTKLNECP 99 (99)
T ss_dssp HHHHHHTTTTTTHHHHHHHHHHTCCTTHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCCC
Confidence 5678999999999999999999999999999999994
No 55
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=89.81 E-value=0.4 Score=41.53 Aligned_cols=90 Identities=14% Similarity=0.259 Sum_probs=53.1
Q ss_pred ceEEEEEEEcCCCceEEEEEeCCCCceeeeCCCCCCCccccCCCCCCCCCCCcceecCceEEEEecCc--eEEEEEEEEE
Q 011190 88 AQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTG--AIAGFFSYDS 165 (491)
Q Consensus 88 ~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C~~~~~C~~~~~f~p~~SsT~~~~~~~~~~~Yg~g--s~~G~~~~D~ 165 (491)
..|++++.|. ++++++++|||++.+.+...-.. .|.-...-+. .+. . ...+-| .+.|......
T Consensus 23 ~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~~A~---rlGL~~~~~~----~~~-----~-~a~g~G~~~~~g~v~~~~ 87 (148)
T 3s8i_A 23 TMLYINCKVN--GHPLKAFVDSGAQMTIMSQACAE---RCNIMRLVDR----RWA-----G-VAKGVGTQRIIGRVHLAQ 87 (148)
T ss_dssp CCCEEEEEET--TEEEEEEECTTCSSCEEEHHHHH---HTTCGGGEEG----GGC-----E-ECCC---CEEEEEEEEEE
T ss_pred CEEEEEEEEC--CEEEEEEEeCCCCcEeeCHHHHH---HcCCccccCc----cee-----E-EEEcCCccEEEEEEEEEE
Confidence 4689999998 69999999999999998643211 1110000000 000 0 111222 2467777789
Q ss_pred EEECcEeecccEEEEEEecCCcccccccccccccCc
Q 011190 166 VKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLG 201 (491)
Q Consensus 166 v~ig~~~i~~~~fg~~~~~~~~~~~~~~~~GIlGLg 201 (491)
+.+|+..++ ..|.+... ...++|||+-
T Consensus 88 I~Ig~~~~~-~~~~Vle~--------~~~d~LLGmD 114 (148)
T 3s8i_A 88 IQIEGDFLQ-CSFSILED--------QPMDMLLGLD 114 (148)
T ss_dssp EEETTEEEE-EEEEEETT--------CSSSEEECHH
T ss_pred EEECCEEEE-EEEEEeCC--------CCcCeeccHH
Confidence 999998763 45544432 1248999985
No 56
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=89.19 E-value=0.063 Score=41.48 Aligned_cols=36 Identities=28% Similarity=0.844 Sum_probs=32.1
Q ss_pred eecccchhhhccchhhhhhhhhccCcccccccCcccc
Q 011190 321 VSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCT 357 (491)
Q Consensus 321 ~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C~ 357 (491)
++..|+.++.+||+.++++.. +.+|+.+|..+|+|.
T Consensus 45 ~~~~C~~~V~~y~~~ii~~l~-~~~P~~iC~~lglC~ 80 (81)
T 1n69_A 45 MADICKNYISQYSEIAIQMMM-HMQPKEICALVGFCD 80 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TSCHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHh-cCCHHHHHhhcCCCC
Confidence 677899999999998877666 799999999999995
No 57
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=87.30 E-value=0.065 Score=41.49 Aligned_cols=37 Identities=38% Similarity=0.813 Sum_probs=34.0
Q ss_pred eecccchhhhccchhhhhhhhhc-cCcccccccCcccc
Q 011190 321 VSQQCKAVVEQYGQTILDLLLFE-AHPKKICSQMGLCT 357 (491)
Q Consensus 321 ~~~~C~~~~~~~g~~~i~~~~~~-~~~~~~~~~~g~C~ 357 (491)
+...|+.++..|++.++++...+ .+|..+|+.+|+|.
T Consensus 45 ~~~~C~~~v~~y~~~ii~~l~~~~~~p~~vC~~l~lC~ 82 (83)
T 4ddj_A 45 MSASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNLCE 82 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHTTSCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHccCCHHHHHhHcCCCC
Confidence 46789999999999999999988 49999999999996
No 58
>3s64_A AC-SLP-1, saposin-like protein 1; lipid-binding, lipid binding protein; HET: CIT EPE; 2.30A {Ancylostoma caninum}
Probab=83.31 E-value=0.19 Score=39.21 Aligned_cols=40 Identities=18% Similarity=0.320 Sum_probs=34.5
Q ss_pred cCcccchhhHHHHHHHHHHhhhchhHHHHHHHHHhhhccCCC
Q 011190 383 LNNAMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPS 424 (491)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (491)
.+...|.+|++.++.++..++++.+ +|+..|+..|++++.
T Consensus 8 ~~~l~C~~C~~~Vk~~e~~i~~~~~--eie~~~d~~Ckk~~~ 47 (87)
T 3s64_A 8 SNVIVCEICKMAVKLIVPEADKDLD--QLEKEFIQGCMTLIG 47 (87)
T ss_dssp CCTTHHHHHHHHHHHHTTCSSCSST--THHHHHHHHHHHHHC
T ss_pred CCccchHHHHHHHHHHHHhccCCHH--HHHHHHHHHHHHhcc
Confidence 3557899999999999999998666 699999999998854
No 59
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=80.23 E-value=2.1 Score=34.26 Aligned_cols=30 Identities=23% Similarity=0.264 Sum_probs=25.5
Q ss_pred EEEEEEEcCCCceEEEEEeCCCCceeeeCCCC
Q 011190 90 YYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNC 121 (491)
Q Consensus 90 Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C 121 (491)
-+++|.|| +|.+.+++|||.+++.+.....
T Consensus 9 P~vtvkI~--Gq~~eaLLDTGAD~TVl~~~~~ 38 (99)
T 2hs1_A 9 PLVTIKIG--GQLKEALLDTGADDTIIEEMSL 38 (99)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSEEESCCSS
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEecccC
Confidence 36779999 7999999999999999976544
No 60
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=80.14 E-value=0.23 Score=37.61 Aligned_cols=33 Identities=15% Similarity=0.490 Sum_probs=30.1
Q ss_pred eecccchhhhccchhhhhhhhhccCcccccccC
Q 011190 321 VSQQCKAVVEQYGQTILDLLLFEAHPKKICSQM 353 (491)
Q Consensus 321 ~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~ 353 (491)
+...|+.++.+|++++++..+++.+|..+|..+
T Consensus 41 ~~~~C~~~V~~y~~~Ii~~L~~~~~P~~IC~~i 73 (74)
T 1l9l_A 41 WRDVCRNFMRRYQSRVIQGLVAGETAQQICEDL 73 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhc
Confidence 567899999999999999999999999999764
No 61
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=79.09 E-value=1.9 Score=34.87 Aligned_cols=28 Identities=18% Similarity=0.237 Sum_probs=24.3
Q ss_pred eEEEEEEEcCCCceEEEEEeCCCCceeeeC
Q 011190 89 QYYGEIGIGTPPQKFTVIFDTGSSNLWVPS 118 (491)
Q Consensus 89 ~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~ 118 (491)
.-++.|.|| +|.+.+++|||.+++.+..
T Consensus 8 RP~v~v~I~--Gq~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 8 RPTTIVLIN--DTPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp CCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred CCEEEEEEC--CEEEEEEeccCCCcEEEcc
Confidence 346789999 7999999999999999973
No 62
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=75.98 E-value=3.1 Score=33.17 Aligned_cols=30 Identities=23% Similarity=0.181 Sum_probs=25.4
Q ss_pred EEEEEEEcCCCceEEEEEeCCCCceeeeCCCC
Q 011190 90 YYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNC 121 (491)
Q Consensus 90 Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C 121 (491)
-+++|.|| +|.+.+++|||.+++-+...++
T Consensus 9 P~vti~I~--Gq~~e~LLDTGAD~TVl~~~~~ 38 (99)
T 3ec0_A 9 PVVTAYIE--GQPVEVLLDTGADDSIVAGIEL 38 (99)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEESSCCC
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEcCccc
Confidence 36779999 7999999999999999965544
No 63
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=72.89 E-value=3.1 Score=34.01 Aligned_cols=33 Identities=15% Similarity=0.228 Sum_probs=27.4
Q ss_pred EEEEEEEc---CCCceEEEEEeCCCCceeeeCCCCC
Q 011190 90 YYGEIGIG---TPPQKFTVIFDTGSSNLWVPSTNCY 122 (491)
Q Consensus 90 Y~~~i~iG---tP~Q~~~v~lDTGSs~lWV~~~~C~ 122 (491)
=.+.|.|| +|+|.+..++|||.+++.+....+.
T Consensus 11 PlvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~lP 46 (116)
T 3liy_A 11 PVIKAQVDTQTSHPKTIEALLDTGADMTVIPIALFS 46 (116)
T ss_dssp CEEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGSC
T ss_pred CeEEEEEccccCCCeEeEEEeccCCCccEEecccCC
Confidence 45667777 7899999999999999999876653
No 64
>3vcm_P Prorenin; aspartic proteases, hydrolase; HET: NAG; 2.93A {Homo sapiens}
Probab=69.91 E-value=2.6 Score=28.02 Aligned_cols=24 Identities=21% Similarity=0.120 Sum_probs=19.9
Q ss_pred ceEEEeeeecCCChhhhhhhcchh
Q 011190 29 GLVRIGLKKMKLDPNNRLAARLES 52 (491)
Q Consensus 29 ~~~~ipl~~~~~~~~~~~~~~~~~ 52 (491)
.++||||+|.++.++.+.+.+...
T Consensus 7 ~l~RIPL~k~kS~R~~l~e~g~~~ 30 (43)
T 3vcm_P 7 TFKRIFLKRMPSIRESLKERGVDM 30 (43)
T ss_dssp CCEEEEEEECCCHHHHHHHHTCCG
T ss_pred ceeEEeeeecccHHHHHHHcCchH
Confidence 468999999999999888876543
No 65
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=65.67 E-value=5.4 Score=32.78 Aligned_cols=28 Identities=14% Similarity=0.097 Sum_probs=23.5
Q ss_pred EEEEEEEcCCCceEEEEEeCCCCceeeeCCC
Q 011190 90 YYGEIGIGTPPQKFTVIFDTGSSNLWVPSTN 120 (491)
Q Consensus 90 Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~ 120 (491)
=++ |.|| +|.+.+++|||.+++-+....
T Consensus 15 P~v-ikI~--Gq~~eaLLDTGAD~TVi~~~~ 42 (116)
T 2hah_A 15 EIL-IFVN--GYPIKFLLDTGADITVLNRRD 42 (116)
T ss_dssp EEE-EEET--TEEEEEEECTTCSSCEEEGGG
T ss_pred CEE-EEEC--CEEEEEEecCCCCcEEEcccc
Confidence 455 8999 799999999999999997543
No 66
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=61.13 E-value=8.2 Score=31.54 Aligned_cols=30 Identities=13% Similarity=0.121 Sum_probs=25.6
Q ss_pred EEEEEEEcCCCceEEEEEeCCCCceeeeCCCC
Q 011190 90 YYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNC 121 (491)
Q Consensus 90 Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C 121 (491)
-.+.|.|| +|.+..++|||.+++-+...+.
T Consensus 10 P~vti~I~--Gq~~eaLLDTGADdTVi~~~~l 39 (114)
T 3sqf_A 10 PSLTLWLD--DKMFTGLINTGADVTIIKLEDW 39 (114)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEEGGGS
T ss_pred CeEEEEEC--CEEEEEEEccCCCceEEecccC
Confidence 46778899 7999999999999999976554
No 67
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=55.06 E-value=13 Score=31.14 Aligned_cols=31 Identities=19% Similarity=0.252 Sum_probs=25.6
Q ss_pred ceEEEEEEEcCCCceEEEEEeCCCCceeeeCCC
Q 011190 88 AQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTN 120 (491)
Q Consensus 88 ~~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~ 120 (491)
..-++.+.|+ +|.+.+++|||.+++.+....
T Consensus 21 ~RP~v~i~I~--G~~~~~LlDTGAd~tVl~~~~ 51 (132)
T 3slz_A 21 PEPRITLKVG--GQPVTFLVDTGAQHSVLTQNP 51 (132)
T ss_dssp CSSEEEEEET--TEEEEEEECTTCSSCEECSCC
T ss_pred CCCEEEEEEC--CEEEEEEEeCCCCeEEEcccc
Confidence 3457778999 699999999999999996543
No 68
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=52.19 E-value=12 Score=31.57 Aligned_cols=29 Identities=21% Similarity=0.263 Sum_probs=23.5
Q ss_pred EEECCeeceeecCCceEEEcCCCCcccccHHHHHHH
Q 011190 276 VLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMI 311 (491)
Q Consensus 276 i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l 311 (491)
+.+||..+ .++||||++.+.++.+..+.+
T Consensus 31 v~InG~~~-------~~LvDTGAs~s~is~~~a~~l 59 (148)
T 2i1a_A 31 IEINNYPV-------KAFVDTGAQTTIMSTRLAKKT 59 (148)
T ss_dssp EEETTEEE-------EEEECTTCSSCEEEHHHHHHH
T ss_pred EEECCEEE-------EEEEECCCCccccCHHHHHHc
Confidence 56788754 479999999999998887765
No 69
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=50.53 E-value=12 Score=32.01 Aligned_cols=29 Identities=21% Similarity=0.315 Sum_probs=23.5
Q ss_pred EEECCeeceeecCCceEEEcCCCCcccccHHHHHHH
Q 011190 276 VLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMI 311 (491)
Q Consensus 276 i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l 311 (491)
+.|||..+ .+++|||++.+.++.+.++.+
T Consensus 29 ~~Ing~~v-------~~LVDTGAs~s~Is~~~A~rl 57 (148)
T 3s8i_A 29 CKVNGHPL-------KAFVDSGAQMTIMSQACAERC 57 (148)
T ss_dssp EEETTEEE-------EEEECTTCSSCEEEHHHHHHT
T ss_pred EEECCEEE-------EEEEeCCCCcEeeCHHHHHHc
Confidence 34677755 479999999999999888776
No 70
>1htr_P Progastricsin (Pro segment); aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_P
Probab=48.58 E-value=9.7 Score=24.54 Aligned_cols=22 Identities=27% Similarity=0.232 Sum_probs=18.0
Q ss_pred eEEEeeeecCCChhhhhhhcch
Q 011190 30 LVRIGLKKMKLDPNNRLAARLE 51 (491)
Q Consensus 30 ~~~ipl~~~~~~~~~~~~~~~~ 51 (491)
++||||+|.++.++.+.+.+..
T Consensus 2 l~RIpL~K~~s~R~~l~~~g~~ 23 (43)
T 1htr_P 2 VVKVPLKKFKSIRETMKEKGLL 23 (43)
T ss_dssp CEEEEEEECCCHHHHHHHTTCH
T ss_pred eEEEeeeEcchHHHHHHHcCcH
Confidence 6899999999988888776644
No 71
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=47.81 E-value=15 Score=33.23 Aligned_cols=30 Identities=27% Similarity=0.314 Sum_probs=25.2
Q ss_pred eEEEEEEEcCCCceEEEEEeCCCCceeeeCCC
Q 011190 89 QYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTN 120 (491)
Q Consensus 89 ~Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~ 120 (491)
.-.++|.|| +|.+.+++|||.+++-+...+
T Consensus 8 RP~vtv~I~--Gq~~e~LLDTGAD~TVl~~~~ 37 (203)
T 3ka2_A 8 RPLVTIRIG--GQLKEALLDTGADDTVIEELN 37 (203)
T ss_dssp CCEEEEEET--TEEEEEEECTTCSSCEECSCC
T ss_pred CCeEEEEEC--CEEEEEEEecCCCceEEeccc
Confidence 347789999 799999999999999996443
No 72
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=46.77 E-value=18 Score=29.95 Aligned_cols=24 Identities=13% Similarity=0.218 Sum_probs=20.5
Q ss_pred EcCCCceEEEEEeCCCCceeeeCCCC
Q 011190 96 IGTPPQKFTVIFDTGSSNLWVPSTNC 121 (491)
Q Consensus 96 iGtP~Q~~~v~lDTGSs~lWV~~~~C 121 (491)
|| +|.+..++|||.+++.+.....
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~~l 50 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEEDW 50 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETTTS
T ss_pred CC--CEEEEEEecCCCCcEEEecccC
Confidence 66 6888999999999999987655
No 73
>1tzs_P Activation peptide from cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=46.52 E-value=9.2 Score=23.30 Aligned_cols=23 Identities=17% Similarity=0.057 Sum_probs=17.7
Q ss_pred ceEEEeeeecCCChhhhhhhcch
Q 011190 29 GLVRIGLKKMKLDPNNRLAARLE 51 (491)
Q Consensus 29 ~~~~ipl~~~~~~~~~~~~~~~~ 51 (491)
.++||||+|.++.++.+.+.+..
T Consensus 2 ~l~rIpL~K~~s~r~~l~~~g~~ 24 (35)
T 1tzs_P 2 SLHRVPLRRHPSLKKKLRARSQL 24 (35)
T ss_pred cEEEEEeEEchHHHHHHHHcccH
Confidence 36899999998888877765533
No 74
>3vdj_A Circumsporozoite (CS) protein; TSR, ATSR, cell invasion; 1.70A {Plasmodium falciparum} PDB: 3vdk_A 3vdl_A
Probab=44.24 E-value=16 Score=27.56 Aligned_cols=30 Identities=20% Similarity=0.577 Sum_probs=25.6
Q ss_pred chhHHHHHHHHHhhhccCCCCCCceeecCc
Q 011190 405 NQTQENILQYVNELCDRMPSPMGESAVDCG 434 (491)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~C~ 434 (491)
.+++|.|+++++++...+.++-+...+.|.
T Consensus 5 ~p~~~~i~~~l~ki~~~vtS~WS~CSvTCG 34 (77)
T 3vdj_A 5 EPSDKHIKEYLNKIQNSLSTEWSPCSVTCG 34 (77)
T ss_dssp SCCHHHHHHHHHHHTTTCSSSCCCCSCSSS
T ss_pred cccHHHHHHHHHHHhccccccCCCCCCcCC
Confidence 478999999999999988887777777776
No 75
>3s64_A AC-SLP-1, saposin-like protein 1; lipid-binding, lipid binding protein; HET: CIT EPE; 2.30A {Ancylostoma caninum}
Probab=39.96 E-value=4.5 Score=31.43 Aligned_cols=52 Identities=21% Similarity=0.315 Sum_probs=40.5
Q ss_pred HHHHHHHHHHh-CCCceeecccchhhhccchhhhhhhhhccCcccccccCccc
Q 011190 305 TTVITMINHAI-GASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLC 356 (491)
Q Consensus 305 ~~~~~~l~~~l-~a~~~~~~~C~~~~~~~g~~~i~~~~~~~~~~~~~~~~g~C 356 (491)
...+++.=+.+ ++...-+..|+.++.+|.+.+|+....+..|..+|..++.|
T Consensus 35 e~~~d~~Ckk~~~~ip~a~k~C~~~v~~~~d~II~eLe~g~~P~~VC~~L~~C 87 (87)
T 3s64_A 35 EKEFIQGCMTLIGWLPYAEKECKALAKIEMGAIKTLLENGSAPEEICTTLHAC 87 (87)
T ss_dssp HHHHHHHHHHHHCSSTTHHHHHHHHHHHHHHHHHHHHHTTCCTTTHHHHHHCC
T ss_pred HHHHHHHHHHhcccCCchHHHHHHHHHHhHHHHHHHHHcCCCHHHHHHHhccC
Confidence 44555555554 43333356799999999999999999999999999998887
No 76
>3dex_A SAV_2001; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Streptomyces avermitilis} SCOP: c.47.1.0
Probab=39.11 E-value=8.5 Score=31.05 Aligned_cols=45 Identities=13% Similarity=0.148 Sum_probs=29.5
Q ss_pred cCcccchhhHHHHHHHHHHhhhchhHHHHHHHHHhh---hccCCCCCCceeecCc
Q 011190 383 LNNAMCSACEMAVVWMQNQLQQNQTQENILQYVNEL---CDRMPSPMGESAVDCG 434 (491)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~C~ 434 (491)
..=+||..|.++.+... ...+++++|.+. +...|...|.|.|.++
T Consensus 15 V~I~YC~~C~w~lRa~~-------laqeLl~tF~~~l~eVsL~Pg~gG~FeV~vd 62 (107)
T 3dex_A 15 VQIEYCTQCRWLPRAAW-------LAQELLTTFETELTELALKPGTGGVFVVRVD 62 (107)
T ss_dssp EEEEEETTTTCHHHHHH-------HHHHHHHHSTTTEEEEEEEEESSSCEEEEET
T ss_pred EEEEECCCCCChHHHHH-------HHHHHHHhcccccceEEEEeCCCceEEEEEC
Confidence 44579999999988662 355667776654 3344666666666554
No 77
>2oka_A Hypothetical protein; PAR82, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.50A {Pseudomonas aeruginosa} PDB: 2obk_A
Probab=36.00 E-value=11 Score=30.18 Aligned_cols=45 Identities=13% Similarity=0.233 Sum_probs=25.7
Q ss_pred cCcccchhhHHHHHHHHHHhhhchhHHHHHHHHHhhh---ccCCCCCCceeecCc
Q 011190 383 LNNAMCSACEMAVVWMQNQLQQNQTQENILQYVNELC---DRMPSPMGESAVDCG 434 (491)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~C~ 434 (491)
..=+||..|.|..++.. ..+++++.|.+-. ...|.+.|.|.|.++
T Consensus 8 V~I~YC~~C~~~~Ra~~-------laqeLl~tF~~~l~~v~l~P~~~G~FEV~vn 55 (104)
T 2oka_A 8 IVITYCTQCQWLLRAAW-------LAQELLSTFADDLGKVCLEPGTGGVFRITCD 55 (104)
T ss_dssp EEEEEETTTTCHHHHHH-------HHHHHHHHSTTTCSEEEEEEECTTCEEEEET
T ss_pred EEEEECCCCCChHHHHH-------HHHHHHHHcCcccceEEEEeCCCceEEEEEC
Confidence 34479999999887662 2345555554322 222555555555554
No 78
>2npb_A Selenoprotein W; structure, thioredoxin-like fold, oxidoreductase; NMR {Mus musculus}
Probab=35.29 E-value=19 Score=28.44 Aligned_cols=43 Identities=16% Similarity=0.196 Sum_probs=27.5
Q ss_pred cccchhhHHHHHHHHHHhhhchhHHHHHHHHHh----hhccCCCCCCceeecCc
Q 011190 385 NAMCSACEMAVVWMQNQLQQNQTQENILQYVNE----LCDRMPSPMGESAVDCG 434 (491)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~~C~ 434 (491)
=++|..|.|..++. ...+++++.|.+ -....|.+.|.|.|.++
T Consensus 7 I~YC~~C~y~~ra~-------~laqeLl~~Fp~~l~V~~~l~p~~~G~FEV~vn 53 (96)
T 2npb_A 7 VVYSGACGYKPKYL-------QLKEKLEHEFPGCLDICGEGTPQVTGFFEVTVA 53 (96)
T ss_dssp EECCCCSCHHHHHH-------HHHHHHHHHSBTTEEEEECCCSSCCSCCEEEET
T ss_pred EEEcCCCCCHHHHH-------HHHHHHHHhCCcceEEEEEEcCCCCcEEEEEEC
Confidence 36899999988876 234566666654 22344666666666654
No 79
>2ojl_A Hypothetical protein; BPR68, NESG, Q7WAF1, structural genomics, PSI-2, protein STR initiative, northeast structural genomics consortium; 2.10A {Bordetella parapertussis}
Probab=34.59 E-value=19 Score=29.06 Aligned_cols=45 Identities=11% Similarity=0.196 Sum_probs=28.7
Q ss_pred cCcccchhhHHHHHHHHHHhhhchhHHHHHHHHHhhh---ccCCCCCCceeecCc
Q 011190 383 LNNAMCSACEMAVVWMQNQLQQNQTQENILQYVNELC---DRMPSPMGESAVDCG 434 (491)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~C~ 434 (491)
..=+||..|.++.+... ...+++++|.+-. ...|++.|.|.|.++
T Consensus 11 V~I~YC~~C~w~lRa~~-------laqeLl~tF~~~l~eV~L~P~~~G~FeV~vn 58 (108)
T 2ojl_A 11 IAIQYCTQCQWLLRAAW-------MAQELLSTFGADLGEVALVPGTGGVFRIHYN 58 (108)
T ss_dssp EEEEEETTTTCHHHHHH-------HHHHHHHHHGGGSSEEEEEEECTTCEEEEET
T ss_pred EEEEECCCCCChHHHHH-------HHHHHHHhcCcccceEEEEeCCCceEEEEEC
Confidence 34579999999888652 3466777775321 223666777766665
No 80
>2p0g_A Selenoprotein W-related protein; VCR75, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Vibrio cholerae}
Probab=34.45 E-value=12 Score=30.04 Aligned_cols=43 Identities=16% Similarity=0.262 Sum_probs=26.2
Q ss_pred cccchhhHHHHHHHHHHhhhchhHHHHHHHHHhhh---ccCCCCCCceeecCc
Q 011190 385 NAMCSACEMAVVWMQNQLQQNQTQENILQYVNELC---DRMPSPMGESAVDCG 434 (491)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~C~ 434 (491)
=+||..|.|..++.. ..+++++.|.+-. ...|.+.|.|.|.++
T Consensus 8 I~YC~~C~w~~Ra~~-------laqeLl~tF~~~l~~v~l~P~~~G~FEV~vn 53 (105)
T 2p0g_A 8 IYYCRQCNWMLRSAW-------LSQELLHTFSEEIEYVALHPDTGGRFEIFCN 53 (105)
T ss_dssp EEEETTTTCHHHHHH-------HHHHHHHHTTTTEEEEEEEEESTTCEEEEET
T ss_pred EEECCCCCChHHHHH-------HHHHHHHHcCcccceEEEEeCCCceEEEEEC
Confidence 468999999887662 2455666654422 223556666666554
No 81
>2fa8_A Hypothetical protein ATU0228; ALPH-beta structure, 4 helix bundle, structural genomics, PS protein structure initiative; 1.90A {Agrobacterium tumefaciens str} SCOP: c.47.1.23
Probab=32.42 E-value=21 Score=28.61 Aligned_cols=45 Identities=18% Similarity=0.215 Sum_probs=28.5
Q ss_pred cCcccchhhHHHHHHHHHHhhhchhHHHHHHHHHhhh---ccCCCCCCceeecCc
Q 011190 383 LNNAMCSACEMAVVWMQNQLQQNQTQENILQYVNELC---DRMPSPMGESAVDCG 434 (491)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~C~ 434 (491)
..=++|..|.|..++.. ..+++++.|.+-. ...|.+.|.|.|.++
T Consensus 10 V~I~YC~~C~~~~Ra~~-------laqeLl~tF~~~l~~V~l~P~~~G~FEV~vn 57 (105)
T 2fa8_A 10 IAIRYCTQCNWLLRAGW-------MAQEILQTFASDIGEVSLIPSTGGLFEITVD 57 (105)
T ss_dssp EEEEEETTTTCHHHHHH-------HHHHHHHHHGGGCSEEEEEEECTTCEEEEET
T ss_pred EEEEECCCCCCHHHHHH-------HHHHHHHHcCcccceEEEEcCCCcEEEEEEC
Confidence 33478999999888662 3456677765432 233666666666664
No 82
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=28.32 E-value=41 Score=32.22 Aligned_cols=43 Identities=26% Similarity=0.223 Sum_probs=30.8
Q ss_pred ccceeEEeecccceeEEEEeeEEECCeeceeecCCceEEEcCCCCcccccHHH
Q 011190 255 KGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTV 307 (491)
Q Consensus 255 ~G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~ 307 (491)
.|.+...|+.....|.++ |.||.+ ...++||||++.+++|...
T Consensus 3 ~g~v~~~~~~~~~~Y~~~---i~iG~Q-------~~~v~~DTGSs~lWv~~~~ 45 (323)
T 1bxo_A 3 SGVATNTPTANDEEYITP---VTIGGT-------TLNLNFDTGSADLWVFSTE 45 (323)
T ss_dssp CEEEEEEECGGGSCEEEE---EEETTE-------EEEEEEETTCCCEEECBTT
T ss_pred CCceeeeecCCCCEEEEE---EEECCE-------EEEEEEeCCCcceEEecCC
Confidence 355666777666677665 667833 2468999999999998643
No 83
>2w50_A ArMet-like protein 1; MANF, CDNF, saposin, secreted, ER stress, alternative splicing, hormone, growth factor, neurotrophic factor; 1.60A {Homo sapiens}
Probab=27.24 E-value=61 Score=25.70 Aligned_cols=36 Identities=17% Similarity=0.386 Sum_probs=26.9
Q ss_pred cchhh-HHHHHHHHHHhhh--chhHHHHHHHHHhhhccC
Q 011190 387 MCSAC-EMAVVWMQNQLQQ--NQTQENILQYVNELCDRM 422 (491)
Q Consensus 387 ~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 422 (491)
-|++| .++=++.+.+.++ ....+.|++.|.+.|...
T Consensus 5 ~CEVCvk~l~~f~~sl~~~~~~~~~~~IE~~l~~~C~~~ 43 (102)
T 2w50_A 5 DCEVCKEFLNRFYKSLIDRGVNFSLDTIEKELISFCLDT 43 (102)
T ss_dssp TTHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTC
T ss_pred CchhhHHHHHHHHHhcchhccccCHHHHHHHHHHHHhhc
Confidence 49999 5566666666664 348899999999999654
No 84
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=26.55 E-value=45 Score=31.99 Aligned_cols=42 Identities=17% Similarity=0.103 Sum_probs=29.8
Q ss_pred cceeEEeecccceeEEEEeeEEECCeeceeecCCceEEEcCCCCcccccHHH
Q 011190 256 GKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTV 307 (491)
Q Consensus 256 G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~ 307 (491)
|.+...|+.....|.++ |.||.+ ...+++|||++.+++|...
T Consensus 3 ~~v~~~~~~~~~~Y~~~---i~iG~Q-------~~~v~~DTGSs~lWv~~~~ 44 (325)
T 1ibq_A 3 GSAVTTPQNNDEEYLTP---VTVGKS-------TLHLDFDTGSADLWVFSDE 44 (325)
T ss_dssp EEEEEEECTTTSCEEEE---EEEBTE-------EEEEEEETTCCCEEEECTT
T ss_pred ceEEeEEcCCCCEEEEE---EEECCE-------EEEEEEeCCCccceEeeCC
Confidence 45556666666677665 567733 2468999999999998643
No 85
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=25.75 E-value=49 Score=31.71 Aligned_cols=42 Identities=19% Similarity=0.158 Sum_probs=29.9
Q ss_pred cceeEEeecccceeEEEEeeEEECCeeceeecCCceEEEcCCCCcccccHHH
Q 011190 256 GKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTV 307 (491)
Q Consensus 256 G~l~~~pv~~~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~~ 307 (491)
|.+...|+.....|.++ |.||.+ ...++||||++.+++|...
T Consensus 4 ~~v~~~~~~~~~~Y~~~---i~iG~q-------~~~v~~DTGSs~lWv~~~~ 45 (323)
T 1izd_A 4 GSVTTNPTSNDEEYITQ---VTVGDD-------TLGLDFDTGSADLWVFSSQ 45 (323)
T ss_dssp EEEEEEECGGGCCEEEE---EEETTE-------EEEEEEETTCCCEEECBTT
T ss_pred CceeeeEcCCCCEEEEE---EEECCE-------EEEEEEcCCCcceEEecCC
Confidence 55566676666677665 667833 3468999999999998653
No 86
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=25.06 E-value=58 Score=29.30 Aligned_cols=30 Identities=27% Similarity=0.280 Sum_probs=25.1
Q ss_pred EEEEEEEcCCCceEEEEEeCCCCceeeeCCCC
Q 011190 90 YYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNC 121 (491)
Q Consensus 90 Y~~~i~iGtP~Q~~~v~lDTGSs~lWV~~~~C 121 (491)
-.+++.|| +|.+..++|||.+++-+...+.
T Consensus 113 P~~~iki~--Gq~~e~LlDTGAD~TVl~~~~l 142 (203)
T 3ka2_A 113 PLVTIRIG--GQLKEALLDTGADDTVIEELNL 142 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECSCCC
T ss_pred CcEEEEEC--CEEEeeeecccCCceeeecccC
Confidence 46789999 6999999999999999965443
No 87
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=23.88 E-value=81 Score=30.58 Aligned_cols=44 Identities=18% Similarity=0.117 Sum_probs=30.2
Q ss_pred ccceeEEeecc--cceeEEEEeeEEECCeeceeecCCceEEEcCCCCcccccHH
Q 011190 255 KGKHTYVPVTQ--KGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTT 306 (491)
Q Consensus 255 ~G~l~~~pv~~--~~~w~v~l~~i~vgg~~~~~~~~~~~aiiDTGTt~i~lP~~ 306 (491)
+|.....|+.+ ...|.+. |.||.-. ....++||||++.+++|..
T Consensus 4 ~g~~~~~~l~~~~~~~Y~~~---i~iGtP~-----q~~~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 4 DGSVDTPGLYDFDLEEYAIP---VSIGTPG-----QDFYLLFDTGSSDTWVPHK 49 (361)
T ss_dssp -CCEEEEEEEETTTTEEEEE---EEETTTT-----EEEEEEEETTCCCCEEEBT
T ss_pred CCccceEEeecCCCCEEEEE---EEECCCC-----cEEEEEEcCCCCCeEECCC
Confidence 46677778865 4567665 6677421 2346899999999999864
No 88
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=23.57 E-value=82 Score=28.61 Aligned_cols=39 Identities=21% Similarity=0.200 Sum_probs=27.2
Q ss_pred eeeeeecCCceEEEE---EEEcCC-----CceEEEEEeCCCCceeeeCC
Q 011190 79 IVALKNYMDAQYYGE---IGIGTP-----PQKFTVIFDTGSSNLWVPST 119 (491)
Q Consensus 79 ~~~l~n~~~~~Y~~~---i~iGtP-----~Q~~~v~lDTGSs~lWV~~~ 119 (491)
.+|+.+ ...|.++ |.||.- .....+++|||++.+++|..
T Consensus 181 ~~p~~~--~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~ 227 (239)
T 1b5f_A 181 YVPVTY--QYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTA 227 (239)
T ss_dssp EEEEEE--ETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHH
T ss_pred EEEccc--CCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHH
Confidence 356654 3456664 778752 34578999999999999753
Done!