Query 011195
Match_columns 491
No_of_seqs 234 out of 819
Neff 6.2
Searched_HMMs 46136
Date Thu Mar 28 22:39:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011195.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011195hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1021 Acetylglucosaminyltran 100.0 1.8E-64 4E-69 539.6 20.1 362 89-461 66-459 (464)
2 PF03016 Exostosin: Exostosin 100.0 2.2E-54 4.7E-59 433.9 20.9 290 99-415 3-302 (302)
3 KOG2264 Exostosin EXT1L [Signa 99.9 1.5E-23 3.3E-28 219.1 20.0 281 145-458 210-527 (907)
4 KOG1022 Acetylglucosaminyltran 99.6 2.4E-15 5.2E-20 157.8 12.7 234 168-428 135-383 (691)
5 cd03814 GT1_like_2 This family 96.4 0.02 4.4E-07 57.0 10.3 93 338-436 258-352 (364)
6 cd03820 GT1_amsD_like This fam 95.9 0.015 3.2E-07 57.0 5.9 95 338-437 244-340 (348)
7 PF00852 Glyco_transf_10: Glyc 95.8 0.013 2.9E-07 61.3 5.6 138 266-416 142-296 (349)
8 cd03801 GT1_YqgM_like This fam 95.6 0.022 4.7E-07 55.8 5.9 93 338-436 267-362 (374)
9 cd03794 GT1_wbuB_like This fam 95.3 0.11 2.4E-06 51.7 10.0 94 338-437 286-387 (394)
10 PLN02871 UDP-sulfoquinovose:DA 95.2 0.19 4.1E-06 54.1 12.2 94 338-437 323-421 (465)
11 PF00534 Glycos_transf_1: Glyc 95.1 0.018 4E-07 52.4 3.5 84 338-427 84-169 (172)
12 cd03818 GT1_ExpC_like This fam 94.9 0.21 4.6E-06 52.2 11.0 118 311-436 266-387 (396)
13 cd03822 GT1_ecORF704_like This 94.8 0.037 7.9E-07 55.4 5.0 92 338-436 259-354 (366)
14 cd03806 GT1_ALG11_like This fa 94.7 0.27 5.8E-06 52.5 11.3 135 294-437 273-414 (419)
15 TIGR03088 stp2 sugar transfera 94.4 0.25 5.5E-06 50.8 10.0 93 338-436 264-359 (374)
16 cd03819 GT1_WavL_like This fam 94.1 0.12 2.5E-06 52.1 6.6 93 338-436 255-352 (355)
17 cd03808 GT1_cap1E_like This fa 93.9 0.11 2.4E-06 51.1 6.0 92 338-435 255-349 (359)
18 cd05844 GT1_like_7 Glycosyltra 93.7 0.6 1.3E-05 47.3 11.2 94 338-437 256-358 (367)
19 cd04962 GT1_like_5 This family 93.7 0.12 2.6E-06 52.5 6.0 92 339-436 263-357 (371)
20 cd03800 GT1_Sucrose_synthase T 93.5 0.11 2.4E-06 53.2 5.2 95 338-437 294-390 (398)
21 PRK09814 beta-1,6-galactofuran 93.2 0.11 2.3E-06 53.6 4.8 89 338-435 218-317 (333)
22 TIGR03449 mycothiol_MshA UDP-N 93.2 0.17 3.7E-06 52.7 6.1 95 338-437 294-389 (405)
23 cd03809 GT1_mtfB_like This fam 93.1 0.15 3.1E-06 51.0 5.3 92 338-437 264-357 (365)
24 TIGR02149 glgA_Coryne glycogen 93.0 0.55 1.2E-05 48.3 9.7 94 338-437 272-374 (388)
25 cd03807 GT1_WbnK_like This fam 92.9 0.14 3.1E-06 50.4 4.9 92 338-437 260-354 (365)
26 PRK15427 colanic acid biosynth 92.9 0.99 2.2E-05 47.9 11.6 93 338-436 290-392 (406)
27 cd04951 GT1_WbdM_like This fam 92.8 0.77 1.7E-05 46.0 10.1 92 339-436 255-347 (360)
28 cd03821 GT1_Bme6_like This fam 92.4 0.22 4.8E-06 49.3 5.6 92 338-437 273-367 (375)
29 cd03823 GT1_ExpE7_like This fa 92.0 0.33 7E-06 48.1 6.2 88 338-430 254-343 (359)
30 cd03798 GT1_wlbH_like This fam 91.5 0.25 5.3E-06 48.6 4.7 94 338-437 270-364 (377)
31 PRK15484 lipopolysaccharide 1, 91.4 1.3 2.8E-05 46.4 10.2 94 338-437 268-365 (380)
32 cd03804 GT1_wbaZ_like This fam 91.3 0.57 1.2E-05 47.7 7.3 63 338-404 253-315 (351)
33 cd03817 GT1_UGDG_like This fam 91.2 0.77 1.7E-05 45.5 7.9 91 338-434 270-361 (374)
34 cd04949 GT1_gtfA_like This fam 90.6 0.39 8.5E-06 49.2 5.3 94 339-436 271-365 (372)
35 cd03816 GT1_ALG1_like This fam 90.5 1.8 3.9E-05 46.0 10.3 122 295-431 270-399 (415)
36 PRK10307 putative glycosyl tra 90.0 1.1 2.3E-05 47.1 8.1 94 338-437 295-395 (412)
37 cd03792 GT1_Trehalose_phosphor 89.8 2.2 4.8E-05 44.0 10.1 94 338-437 265-359 (372)
38 PRK09922 UDP-D-galactose:(gluc 89.6 1.2 2.5E-05 46.0 7.9 64 339-404 250-313 (359)
39 TIGR02095 glgA glycogen/starch 89.4 1.8 3.9E-05 46.6 9.5 95 339-437 358-460 (473)
40 cd04955 GT1_like_6 This family 89.3 2.4 5.1E-05 42.6 9.7 90 338-436 259-351 (363)
41 PF13524 Glyco_trans_1_2: Glyc 89.2 0.71 1.5E-05 38.0 4.9 81 350-437 2-84 (92)
42 PLN02949 transferase, transfer 89.0 3.3 7.1E-05 45.1 11.1 96 338-437 346-444 (463)
43 PRK00654 glgA glycogen synthas 87.9 3 6.4E-05 45.1 9.8 83 340-427 350-442 (466)
44 PRK14099 glycogen synthase; Pr 87.7 3.6 7.8E-05 45.0 10.4 92 339-437 361-466 (485)
45 cd03802 GT1_AviGT4_like This f 87.7 1.1 2.4E-05 44.5 6.1 41 339-380 236-277 (335)
46 PRK14098 glycogen synthase; Pr 87.1 3.6 7.7E-05 45.1 9.9 92 339-437 374-473 (489)
47 cd03811 GT1_WabH_like This fam 86.5 1.7 3.7E-05 42.3 6.4 92 339-433 256-350 (353)
48 cd03805 GT1_ALG2_like This fam 86.5 0.99 2.1E-05 46.5 5.0 93 339-437 292-386 (392)
49 PF13692 Glyco_trans_1_4: Glyc 85.8 0.59 1.3E-05 40.7 2.5 62 338-404 62-124 (135)
50 TIGR03087 stp1 sugar transfera 85.3 1.8 3.9E-05 45.3 6.3 91 339-437 290-384 (397)
51 TIGR02472 sucr_P_syn_N sucrose 84.4 1.4 3.1E-05 47.1 5.2 85 348-437 342-428 (439)
52 cd03795 GT1_like_4 This family 84.3 2.3 5E-05 42.5 6.4 95 338-436 255-353 (357)
53 cd03799 GT1_amsK_like This is 82.9 3.1 6.6E-05 41.6 6.6 94 338-437 247-349 (355)
54 cd03825 GT1_wcfI_like This fam 82.4 4.3 9.2E-05 40.7 7.4 89 338-431 256-345 (365)
55 cd03813 GT1_like_3 This family 82.3 4.1 8.8E-05 44.1 7.7 87 338-429 362-455 (475)
56 cd03812 GT1_CapH_like This fam 82.1 5.9 0.00013 39.8 8.3 41 338-379 258-298 (358)
57 PHA01630 putative group 1 glyc 82.1 2.4 5.3E-05 43.9 5.6 41 338-379 201-241 (331)
58 PRK15490 Vi polysaccharide bio 81.3 7.9 0.00017 43.3 9.4 63 339-404 465-527 (578)
59 cd03791 GT1_Glycogen_synthase_ 81.0 8.3 0.00018 41.2 9.4 87 340-428 364-457 (476)
60 KOG2619 Fucosyltransferase [Ca 80.1 12 0.00026 39.8 9.8 123 291-423 194-324 (372)
61 PHA01633 putative glycosyl tra 79.7 2.5 5.5E-05 44.2 4.8 41 338-379 215-255 (335)
62 cd04946 GT1_AmsK_like This fam 79.7 16 0.00034 38.7 10.8 92 339-435 301-397 (407)
63 cd03793 GT1_Glycogen_synthase_ 79.4 1.9 4.1E-05 48.3 3.8 110 339-450 467-588 (590)
64 cd03796 GT1_PIG-A_like This fa 78.7 9.5 0.00021 39.9 8.8 95 338-438 261-356 (398)
65 TIGR02918 accessory Sec system 76.5 22 0.00048 39.2 11.1 92 340-436 386-486 (500)
66 TIGR02468 sucrsPsyn_pln sucros 72.4 8.8 0.00019 45.9 7.0 84 349-437 574-658 (1050)
67 PRK13608 diacylglycerol glucos 70.3 40 0.00086 35.5 10.9 82 339-432 266-354 (391)
68 KOG1387 Glycosyltransferase [C 67.8 51 0.0011 35.0 10.6 94 338-434 348-443 (465)
69 PLN02939 transferase, transfer 65.0 13 0.00027 44.2 6.2 94 341-438 851-955 (977)
70 PRK05749 3-deoxy-D-manno-octul 63.3 10 0.00022 40.0 4.9 105 339-458 312-422 (425)
71 PLN00142 sucrose synthase 62.5 24 0.00053 41.2 7.9 95 341-438 660-759 (815)
72 PLN02605 monogalactosyldiacylg 61.4 86 0.0019 32.7 11.3 78 339-429 275-361 (382)
73 TIGR01133 murG undecaprenyldip 60.5 13 0.00027 37.7 4.8 84 339-429 243-334 (348)
74 PRK00726 murG undecaprenyldiph 56.2 24 0.00053 36.0 6.1 102 339-457 245-355 (357)
75 cd03788 GT1_TPS Trehalose-6-Ph 52.1 17 0.00037 39.4 4.3 91 337-433 351-445 (460)
76 cd04950 GT1_like_1 Glycosyltra 49.0 18 0.00038 37.7 3.7 40 338-378 265-309 (373)
77 PF06024 DUF912: Nucleopolyhed 48.4 8.6 0.00019 33.2 1.0 24 16-39 67-90 (101)
78 cd01635 Glycosyltransferase_GT 48.4 19 0.00042 32.8 3.5 40 339-379 174-213 (229)
79 TIGR03590 PseG pseudaminic aci 47.5 50 0.0011 33.2 6.6 75 293-377 171-266 (279)
80 TIGR02400 trehalose_OtsA alpha 46.7 48 0.001 36.1 6.7 87 337-430 346-437 (456)
81 TIGR02470 sucr_synth sucrose s 46.1 71 0.0015 37.4 8.2 90 347-439 644-737 (784)
82 PLN02316 synthase/transferase 45.1 40 0.00087 40.5 6.1 37 342-378 915-951 (1036)
83 COG0438 RfaG Glycosyltransfera 40.0 58 0.0013 30.9 5.5 41 339-380 269-309 (381)
84 PF07172 GRP: Glycine rich pro 37.1 30 0.00066 29.6 2.6 24 13-37 3-26 (95)
85 PRK10125 putative glycosyl tra 36.4 68 0.0015 34.1 5.8 63 338-404 298-360 (405)
86 PRK15179 Vi polysaccharide bio 36.0 1.8E+02 0.0038 33.7 9.3 61 339-402 584-644 (694)
87 cd03785 GT1_MurG MurG is an N- 32.7 58 0.0013 32.8 4.4 83 338-429 244-337 (350)
88 PLN02275 transferase, transfer 32.5 1.5E+02 0.0034 30.6 7.6 76 294-379 261-341 (371)
89 PF13974 YebO: YebO-like prote 32.4 22 0.00047 29.6 0.9 22 20-41 3-24 (80)
90 smart00672 CAP10 Putative lipo 30.6 3.2E+02 0.0069 27.4 9.2 135 289-432 79-230 (256)
91 PLN03194 putative disease resi 29.9 5.2E+02 0.011 25.0 10.0 142 293-461 27-181 (187)
92 TIGR00236 wecB UDP-N-acetylglu 29.2 3.9E+02 0.0085 27.3 10.0 59 310-378 242-300 (365)
93 PF12273 RCR: Chitin synthesis 24.0 63 0.0014 28.8 2.5 16 17-32 4-19 (130)
94 PLN03063 alpha,alpha-trehalose 23.6 1.4E+02 0.003 35.1 5.8 87 338-430 367-458 (797)
95 PRK00025 lpxB lipid-A-disaccha 23.2 1.2E+02 0.0027 31.0 4.9 104 339-456 254-374 (380)
96 PF05366 Sarcolipin: Sarcolipi 22.6 91 0.002 20.9 2.3 23 13-35 4-26 (31)
97 PRK13609 diacylglycerol glucos 22.4 2.1E+02 0.0045 29.6 6.4 80 339-429 266-351 (380)
98 KOG3185 Translation initiation 20.7 86 0.0019 30.4 2.8 32 346-377 20-51 (245)
No 1
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=100.00 E-value=1.8e-64 Score=539.65 Aligned_cols=362 Identities=34% Similarity=0.515 Sum_probs=297.0
Q ss_pred CCCCcCCCCCCccEEEEecCCccccHHHhhhhcCCCCCCCC---cCCCCCCCCC--------CCCcccchhHHHHHHhhh
Q 011195 89 KDIKCNKNKKGVLKVYMYDLPPQFHFELLDWKSQGGSVWPD---IRTRIPHYPG--------GLNLQHSIEYWLTLDLLA 157 (491)
Q Consensus 89 ~~~~c~~~~~~~~kVYVYDLPp~Fn~~ll~~~~~~~~~W~d---~c~~~~~~~~--------g~~~~~s~e~w~~~dll~ 157 (491)
.+..|.+ .+||||++|+.||.+++++|......|.. +|.+..+.+. |....+..++|+.+++++
T Consensus 66 ~~~~~~~-----~~v~~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 140 (464)
T KOG1021|consen 66 GQAICAG-----ASVYVYNLPSGFDVSLLLFHKQIPTSPNNKKFMCSYKLNEKRGKVYVYHEGNKPLFHTPSWCLTDQYA 140 (464)
T ss_pred chhcccC-----cceeeeccchhhhhhhhccCccccccCcchhhhhhhhhhcccCceEEecCCCCccccCCCcccccchh
Confidence 4456777 89999999999999999988653325666 7766544332 222345567899999999
Q ss_pred ccCCCCCCC---CCceecCCCCCCcEEEEcccccccccccC-CCCCccchhhhHHHHHHHHHHHhccccccccCCcceEE
Q 011195 158 SELPDNPSA---CGAIRVHNSSGADIIFVPFFSSLSYNKYS-KKSPQQNKINNKVLQEKVVRFVTSQEEWKRSGGRDHLI 233 (491)
Q Consensus 158 ~e~~~h~r~---~s~~rT~dP~eAdlFfVP~y~~l~~~~~~-~~~~~~~~~~~~~l~~~l~~~L~~~PyWnRsgGrDHfl 233 (491)
.|.++|.+. .++|||.||+|||+||||||++++++++. +.....+...++.++..++.|+++||||||++|+||||
T Consensus 141 ~E~~~~~~~~~~~~~~Rt~dp~~Ad~f~vPf~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~W~Rs~G~DH~~ 220 (464)
T KOG1021|consen 141 SEGIFHNRMLRRESAFRTLDPLEADAFYVPFYASLDYNRALLWPDERVNAILRSILQDYIVALLSKQPYWNRSSGRDHFF 220 (464)
T ss_pred HHHHHHHHHhcccCceecCChhhCcEEEEcceeeEehhhhcccCCcccchHHHHHHHHHHHHHHhcCchhhccCCCceEE
Confidence 999999994 57899999999999999999999997763 32222234456788999999999999999999999999
Q ss_pred EeccCCchhhhhhcccCcEEEeecCCC---CCCCCCCCC-CccccCCccccccccC------CCCCCCCCCeEEEEecce
Q 011195 234 VAHHPNSMLDARTKLWPAMFILADFGR---YPPHIANVD-KDVIAPYKHMVKSYVN------DTSEFDSRPILLYFQGAI 303 (491)
Q Consensus 234 v~~~~~~~~~~r~~l~~ai~~l~~fg~---~~~~~~~~~-kDVviPy~~~~~~~~~------~~~~~~~R~~L~~FaG~~ 303 (491)
|++|+++....+.....++..+.++++ ...+ +++. +||++||++..++... ......+|++|++|+|+.
T Consensus 221 v~~~~~~~~~~~~~~~~~~~~i~~~~n~a~ls~~-~~~~~~dv~iP~~~~~~~~~~~~~~~~~~~~~~~R~~L~~F~G~~ 299 (464)
T KOG1021|consen 221 VACHDWGDFRRRSDWGASISLIPEFCNGALLSLE-FFPWNKDVAIPYPTIPHPLSPPENSWQGGVPFSNRPILAFFAGAP 299 (464)
T ss_pred EeCCcchheeeccchhhHHHHHHhhCCcceeecc-cccCCCcccCCCccCcCccCccccccccCCCCCCCceEEEEeccc
Confidence 999999987765555555555566653 2222 4456 9999999866544321 123457999999999995
Q ss_pred ecCCCcchHHHHHHHhhcCC----CeEEEeCcccCCChhhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCC
Q 011195 304 YRKDGGSVRQELFYLLKDEK----DVHFSFGSVQKNGIHQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDE 379 (491)
Q Consensus 304 ~~~~~~~iR~~L~~~~~~~~----d~~~~~g~~~~~~~~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~ 379 (491)
.++.||+.|+++|++++ +..+..|...|+++..|++.|++|+|||||+||++||+|+||||++|||||||+|+
T Consensus 300 ---~~~~iR~~L~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~ 376 (464)
T KOG1021|consen 300 ---AGGQIRSILLDLWKKDPDTEVFVNCPRGKVSCDRPLNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDG 376 (464)
T ss_pred ---cCCcHHHHHHHHhhcCcCccccccCCCCccccCCcchHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCC
Confidence 48899999999999822 23444566677888999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcEEEEEecccccccchHHHHHhcCCHHHHHHHHHHHHH-hhhceEEcC--CCCCCCHHHHHHHHHHHH
Q 011195 380 IELPYEDILDYSEFCIFVRTSDAVKGNFLINLVRNIKKDEWTHMRDRLKE-VQRFFEFQF--PSKEGDAVQMIWQAVARK 456 (491)
Q Consensus 380 ~~LPF~d~iDw~~fSV~I~e~dv~~~~~l~~iL~~I~~e~v~~Mr~~l~~-v~~~f~y~~--p~~~~DAf~~il~~l~~R 456 (491)
+++||++++||++|||+|+++++++. +.++|.+|+.+++.+||+++++ +.++|.+.. |.+.+||||+++++|+.|
T Consensus 377 ~~lpf~~~~d~~~fSV~v~~~~v~~~--~~~iL~~i~~~~~~~m~~~v~~~v~r~~~~~~~~~~~~~da~~~~~~~v~~r 454 (464)
T KOG1021|consen 377 IQLPFGDVLDWTEFSVFVPEKDVPEL--IKNILLSIPEEEVLRMRENVIRLVPRHFLKKPPGPPKRGDAFHMILHSLWRR 454 (464)
T ss_pred cccCcCCCccceEEEEEEEHHHhhhH--HHHHHHhcCHHHHHHHHHHHHHHHHhhEEeCCCCCCCcchhHHHHHhhhhhc
Confidence 99999999999999999999999883 5999999999999999999995 999999998 778899999999999999
Q ss_pred hhhhH
Q 011195 457 VPAMR 461 (491)
Q Consensus 457 ~~~~r 461 (491)
+.+++
T Consensus 455 ~~~~~ 459 (464)
T KOG1021|consen 455 LHKLR 459 (464)
T ss_pred ccccc
Confidence 98776
No 2
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=100.00 E-value=2.2e-54 Score=433.95 Aligned_cols=290 Identities=33% Similarity=0.509 Sum_probs=218.5
Q ss_pred CccEEEEecCCccccHHHhhhhcCCCCCCCCcCCCCCCCCCCCCcccchhHHHHHHhhhccCCCCCCCCCceecCCCCCC
Q 011195 99 GVLKVYMYDLPPQFHFELLDWKSQGGSVWPDIRTRIPHYPGGLNLQHSIEYWLTLDLLASELPDNPSACGAIRVHNSSGA 178 (491)
Q Consensus 99 ~~~kVYVYDLPp~Fn~~ll~~~~~~~~~W~d~c~~~~~~~~g~~~~~s~e~w~~~dll~~e~~~h~r~~s~~rT~dP~eA 178 (491)
+++||||||||++||.+++.........| ....+++.|.|++..+.. ++++|.||+||
T Consensus 3 ~~lkVYVY~lp~~~~~~~~~~~~~~~~~~------------~~~~~~~~e~~l~~~l~~----------s~~~T~dp~eA 60 (302)
T PF03016_consen 3 RGLKVYVYPLPPKFNKDLLDPREDEQCSW------------YETSQYALEVILHEALLN----------SPFRTDDPEEA 60 (302)
T ss_pred CCCEEEEEeCCccccccceeccccccCCC------------cccccchHHHHHHHHHHh----------CCcEeCCHHHC
Confidence 34999999999999999983211111111 122467888888766654 56999999999
Q ss_pred cEEEEcccccccccccCCCCCccchhhhHHHHHHHHHHHhccccccccCCcceEEEeccCCchhhhh---hcccCcEEEe
Q 011195 179 DIIFVPFFSSLSYNKYSKKSPQQNKINNKVLQEKVVRFVTSQEEWKRSGGRDHLIVAHHPNSMLDAR---TKLWPAMFIL 255 (491)
Q Consensus 179 dlFfVP~y~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~PyWnRsgGrDHflv~~~~~~~~~~r---~~l~~ai~~l 255 (491)
|+||||++.++.. ...+..+.. ....+.+...+..++.++|||||++|+||||+++++++.+... ....+.+.++
T Consensus 61 dlF~vP~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~w~r~~G~dH~~~~~~~~g~~~~~~~~~~~~~~~~~~ 138 (302)
T PF03016_consen 61 DLFFVPFYSSCYF-HHWWGSPNS-GADRDSLSDALRHLLASYPYWNRSGGRDHFFVNSHDRGGCSFDRNPRLMNNSIRAV 138 (302)
T ss_pred eEEEEEccccccc-ccccCCccc-hhhHHHHHHHHHHHHhcCchhhccCCCCeEEEeccccccccccccHhhhccchhhe
Confidence 9999999998863 111111111 1223456667788888999999999999999999996544321 1112233333
Q ss_pred ecCCCCCCCCCCCCCccccCCccccccc---cC-CCCCCCCCCeEEEEecceecC---CCcchHHHHHHHhhcCCCeEEE
Q 011195 256 ADFGRYPPHIANVDKDVIAPYKHMVKSY---VN-DTSEFDSRPILLYFQGAIYRK---DGGSVRQELFYLLKDEKDVHFS 328 (491)
Q Consensus 256 ~~fg~~~~~~~~~~kDVviPy~~~~~~~---~~-~~~~~~~R~~L~~FaG~~~~~---~~~~iR~~L~~~~~~~~d~~~~ 328 (491)
...+.+...++++++||++|+....... .. ......+|++|++|+|..++. .++.+|+.|++.|++.++..+.
T Consensus 139 ~~~~~~~~~~~~~~~Di~~P~~~~~~~~~~~~~~~~~~~~~R~~l~~f~g~~~~~~~~~~~~~r~~l~~~~~~~~~~~~~ 218 (302)
T PF03016_consen 139 VAFSSFSSSCFRPGFDIVIPPFVPPSSLPDWRPWPQRPPARRPYLLFFAGTIRPSSNDYSGGVRQRLLDECKSDPDFRCS 218 (302)
T ss_pred eccCCCCcCcccCCCCeeccccccccccCCccccccCCccCCceEEEEeeeccccccccchhhhhHHHHhcccCCcceee
Confidence 3444455677899999999986533221 11 123457999999999998765 3468999999999988876654
Q ss_pred eCcccCCChhhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccchH
Q 011195 329 FGSVQKNGIHQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFL 408 (491)
Q Consensus 329 ~g~~~~~~~~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~~l 408 (491)
.+...+.+..+|.+.|++|+|||||+|+++++.||+|||++|||||||+|+++|||+++|||++|||+|+++|+++ |
T Consensus 219 ~~~~~~~~~~~~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~---l 295 (302)
T PF03016_consen 219 DGSETCPSPSEYMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPE---L 295 (302)
T ss_pred ecccccccchHHHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHH---H
Confidence 3433444566799999999999999999999999999999999999999999999999999999999999999988 9
Q ss_pred HHHHhcC
Q 011195 409 INLVRNI 415 (491)
Q Consensus 409 ~~iL~~I 415 (491)
.++|++|
T Consensus 296 ~~iL~~i 302 (302)
T PF03016_consen 296 PEILRSI 302 (302)
T ss_pred HHHHhcC
Confidence 9999987
No 3
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]
Probab=99.91 E-value=1.5e-23 Score=219.15 Aligned_cols=281 Identities=19% Similarity=0.245 Sum_probs=192.4
Q ss_pred cchhHHHHHHhhhccCCCCCCCCCceecCCCCCCcEEEEcccccccccccCCCCCccchhhhHHHHHHHHHHHhcccccc
Q 011195 145 HSIEYWLTLDLLASELPDNPSACGAIRVHNSSGADIIFVPFFSSLSYNKYSKKSPQQNKINNKVLQEKVVRFVTSQEEWK 224 (491)
Q Consensus 145 ~s~e~w~~~dll~~e~~~h~r~~s~~rT~dP~eAdlFfVP~y~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~PyWn 224 (491)
++.+.|+.+- |+ +.+ ....+.|+||+.| |+||-..+..- . +... . ..++ +-|-+.|||.
T Consensus 210 ~~~d~~lk~~-fq-~t~----~~n~~~ve~pd~A-Ciyi~lvge~q-~------P~~l--~----p~el-eklyslp~w~ 268 (907)
T KOG2264|consen 210 QSEDEWLKQV-FQ-ETI----PNNVYLVETPDKA-CIYIHLVGEIQ-S------PVVL--T----PAEL-EKLYSLPHWR 268 (907)
T ss_pred cchHHHHHHH-HH-Hhc----ccceeEeeCCCcc-EEEEEEecccc-C------CCcC--C----hHhh-hhhhcCcccc
Confidence 4567887532 22 111 2356899999999 99988766431 1 1000 1 1232 3378899995
Q ss_pred ccCCcceEEEeccCCch---hhhhhcccCcEEEeecCCCCCCCCCCCCCccccCCcccc---ccccC-CCCCCCCCCeEE
Q 011195 225 RSGGRDHLIVAHHPNSM---LDARTKLWPAMFILADFGRYPPHIANVDKDVIAPYKHMV---KSYVN-DTSEFDSRPILL 297 (491)
Q Consensus 225 RsgGrDHflv~~~~~~~---~~~r~~l~~ai~~l~~fg~~~~~~~~~~kDVviPy~~~~---~~~~~-~~~~~~~R~~L~ 297 (491)
++|+||++++-...+. .-.+...+.||.+.+.|-+ ..++|+.|.++|+.... +.|+. ...-+.+|++|+
T Consensus 269 -~dg~Nhvl~Nl~r~s~~~n~lyn~~t~raivvQssf~~---~q~RpgfDl~V~pv~h~~~e~~~~e~~p~vP~~RkyL~ 344 (907)
T KOG2264|consen 269 -TDGFNHVLFNLGRPSDTQNLLYNFQTGRAIVVQSSFYT---VQIRPGFDLPVDPVNHIAVEKNFVELTPLVPFQRKYLI 344 (907)
T ss_pred -CCCcceEEEEccCccccccceeEeccCceEEEeeccee---eeeccCCCcccCcccccccCccceecCcccchhhheeE
Confidence 7999999997432221 1223445678888888743 45789999988754322 12322 123357999999
Q ss_pred EEecceecCCCc--chHHHHHHHhhcCC-----C---eEEEeC--c---c--------cCCChhhhhhcccCccEEEe-e
Q 011195 298 YFQGAIYRKDGG--SVRQELFYLLKDEK-----D---VHFSFG--S---V--------QKNGIHQASQGMHSSKFCLN-I 353 (491)
Q Consensus 298 ~FaG~~~~~~~~--~iR~~L~~~~~~~~-----d---~~~~~g--~---~--------~~~~~~~y~~~m~~S~FCL~-P 353 (491)
.|+|.+++..+. ..+.-..++..+.+ | ..+.|. . . .|+..+.-.+++.+|+|||. |
T Consensus 345 t~qgki~~~~ssLn~~~aF~~e~~adp~~~a~qds~i~qv~c~~t~k~Qe~~SLpewalcg~~~~RrqLlk~STF~lilp 424 (907)
T KOG2264|consen 345 TLQGKIESDNSSLNEFSAFSEELSADPSRRAVQDSPIVQVKCSFTCKNQENCSLPEWALCGERERRRQLLKSSTFCLILP 424 (907)
T ss_pred EEEeeecccccccchhhhhHHHhccCCcccccccCceEEEEEeeccccCCCCCcchhhhccchHHHHHHhccceeEEEec
Confidence 999988765432 23333333332211 1 112221 0 0 13445567899999999997 7
Q ss_pred CCCCCC-----chhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccchHHHHHhcCCHHHHHHHHHHHH
Q 011195 354 AGDTPS-----SNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINLVRNIKKDEWTHMRDRLK 428 (491)
Q Consensus 354 ~Gds~~-----s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~~l~~iL~~I~~e~v~~Mr~~l~ 428 (491)
+||+-. -.|++||+..||||||+++...|||+|.|||.+.++.+|..++.+ ++-+|+++...++.+||++.+
T Consensus 425 p~d~rv~S~~~~~r~~eaL~~GavPviLg~~~~LPyqd~idWrraal~lPkaR~tE---~HFllrs~~dsDll~mRRqGR 501 (907)
T KOG2264|consen 425 PGDPRVISEMFFQRFLEALQLGAVPVILGNSQLLPYQDLIDWRRAALRLPKARLTE---AHFLLRSFEDSDLLEMRRQGR 501 (907)
T ss_pred CCCcchhhHHHHHHHHHHHhcCCeeEEeccccccchHHHHHHHHHhhhCCccccch---HHHHHHhcchhhHHHHHhhhh
Confidence 898632 379999999999999999999999999999999999999999998 999999999999999999774
Q ss_pred HhhhceEEcCC-CCCCCHHHHHHHHHHHHhh
Q 011195 429 EVQRFFEFQFP-SKEGDAVQMIWQAVARKVP 458 (491)
Q Consensus 429 ~v~~~f~y~~p-~~~~DAf~~il~~l~~R~~ 458 (491)
+.|... +...-.+++++.+|..|+.
T Consensus 502 -----l~wEtYls~~~~~~~tvlA~lR~rlq 527 (907)
T KOG2264|consen 502 -----LFWETYLSDRHLLARTVLAALRYRLQ 527 (907)
T ss_pred -----hhHHHHhhHHHHHHHHHHHHHHHhhC
Confidence 555433 2334568889999988875
No 4
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=99.62 E-value=2.4e-15 Score=157.84 Aligned_cols=234 Identities=21% Similarity=0.166 Sum_probs=168.9
Q ss_pred CceecCCCCCCcEEEEcccccccccccCCCCCccchhhhHHHHHHHHHHHhccccccccCCcceEEEeccCCchhhhhhc
Q 011195 168 GAIRVHNSSGADIIFVPFFSSLSYNKYSKKSPQQNKINNKVLQEKVVRFVTSQEEWKRSGGRDHLIVAHHPNSMLDARTK 247 (491)
Q Consensus 168 s~~rT~dP~eAdlFfVP~y~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~PyWnRsgGrDHflv~~~~~~~~~~r~~ 247 (491)
|.+.|.|+++| |.|+|-..-+..+.+.|. + ...-|.+.-.|+| |.+|..+..-+++..+....
T Consensus 135 S~yyt~n~N~a-clf~Ps~d~lnQn~l~~k-----------l---~~~ala~l~~wdr--g~nH~~fnmLpGg~p~ynta 197 (691)
T KOG1022|consen 135 SFYYTFNYNGA-CLFMPSSDELNQNPLSWK-----------L---EKVALAKLLVWDR--GVNHEGFNMLPGGDPTYNTA 197 (691)
T ss_pred ccceecCCCce-EEEecchhhhccCcchHH-----------H---HHHHHhcccchhc--ccceeeEeeccCCCCCcccc
Confidence 56899999999 999999987776654431 1 1122455669996 99999999888776554322
Q ss_pred c----cCcEEEeecCCCCCCCCCCCCCccccCCccccccccCCCCCCCCCCeEEEEecceecCCCcchHHHHHHHhhcCC
Q 011195 248 L----WPAMFILADFGRYPPHIANVDKDVIAPYKHMVKSYVNDTSEFDSRPILLYFQGAIYRKDGGSVRQELFYLLKDEK 323 (491)
Q Consensus 248 l----~~ai~~l~~fg~~~~~~~~~~kDVviPy~~~~~~~~~~~~~~~~R~~L~~FaG~~~~~~~~~iR~~L~~~~~~~~ 323 (491)
+ .+|+...+.||.|. ++.+.||.+|..+....-. ......+|.+++--.|- +.+..+|..|+++.....
T Consensus 198 ldv~~d~a~~~gggf~tW~---yr~g~dv~ipv~Sp~~v~~-~~~~~g~r~~~l~~~q~---n~~pr~r~~l~el~~kh~ 270 (691)
T KOG1022|consen 198 LDVGQDEAWYSGGGFGTWK---YRKGNDVYIPVRSPGNVGR-AFLYDGSRYRVLQDCQE---NYGPRIRVSLIELLSKHE 270 (691)
T ss_pred ccCCcceeEEecCCcCccc---ccCCCccccccccccccCc-cccCCccceeeeecccc---ccchHhHHhHHHHHhhcc
Confidence 1 35666777888776 4689999999754321100 11123456554443332 235678888888876554
Q ss_pred CeEEEeCc-----------ccCCChhhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCc
Q 011195 324 DVHFSFGS-----------VQKNGIHQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSE 392 (491)
Q Consensus 324 d~~~~~g~-----------~~~~~~~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~ 392 (491)
.-.+..+. +..+-.-+|.+.+...+||+.-+|-+-...-+.+-+.+||||||..|.+.|||++++||..
T Consensus 271 e~~l~l~~c~nlsl~~r~~~qhH~~~~yp~~l~~~~fc~~~R~~r~gq~~lv~~~~a~c~pvi~vd~y~lpf~~Vvdw~~ 350 (691)
T KOG1022|consen 271 ERELELPFCLNLSLNSRGVRQHHFDVKYPSSLEFIGFCDGDRVTRGGQFHLVILGYASCAPVISVDIYLLPFLGVVDWIV 350 (691)
T ss_pred ceEEecchhccccccccchhhcccccccccccceeeeEeccccccCCccceehhhhcccceeeeeehhhhhhhhhhhcee
Confidence 33322211 1112234689999999999999888877888999999999999999999999999999999
Q ss_pred EEEEEecccccccchHHHHHhcCCHHHHHHHHHHHH
Q 011195 393 FCIFVRTSDAVKGNFLINLVRNIKKDEWTHMRDRLK 428 (491)
Q Consensus 393 fSV~I~e~dv~~~~~l~~iL~~I~~e~v~~Mr~~l~ 428 (491)
.||+++|..+.+ +.+.|++|+...+-+||.+..
T Consensus 351 aSv~~~e~~~~~---v~~~l~~i~~~~i~sl~~r~~ 383 (691)
T KOG1022|consen 351 ASVWCMEYYAGK---VMDALLNIETAGICSLQLRRI 383 (691)
T ss_pred eeEEeehhhHHH---HHHHhhcchhcchhhhhhhhh
Confidence 999999999877 899999999888888877653
No 5
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.44 E-value=0.02 Score=57.00 Aligned_cols=93 Identities=16% Similarity=0.160 Sum_probs=63.9
Q ss_pred hhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccchHHHHHhcC--
Q 011195 338 HQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINLVRNI-- 415 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~~l~~iL~~I-- 415 (491)
++..+.|..|..++.|.+....+..++|||++|| |||.++.-. ..+++.=....+.++..+..+ +.+.+..+
T Consensus 258 ~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~-PvI~~~~~~--~~~~i~~~~~g~~~~~~~~~~---l~~~i~~l~~ 331 (364)
T cd03814 258 EELAAAYASADVFVFPSRTETFGLVVLEAMASGL-PVVAPDAGG--PADIVTDGENGLLVEPGDAEA---FAAALAALLA 331 (364)
T ss_pred HHHHHHHHhCCEEEECcccccCCcHHHHHHHcCC-CEEEcCCCC--chhhhcCCcceEEcCCCCHHH---HHHHHHHHHc
Confidence 4577889999999999888777889999999999 788877432 233443344556666666544 33333322
Q ss_pred CHHHHHHHHHHHHHhhhceEE
Q 011195 416 KKDEWTHMRDRLKEVQRFFEF 436 (491)
Q Consensus 416 ~~e~v~~Mr~~l~~v~~~f~y 436 (491)
.+++..+|.++..+....+.|
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~ 352 (364)
T cd03814 332 DPELRRRMAARARAEAERRSW 352 (364)
T ss_pred CHHHHHHHHHHHHHHHhhcCH
Confidence 577788888888776655444
No 6
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=95.87 E-value=0.015 Score=56.96 Aligned_cols=95 Identities=15% Similarity=0.115 Sum_probs=64.3
Q ss_pred hhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccchHHHHHhcC--
Q 011195 338 HQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINLVRNI-- 415 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~~l~~iL~~I-- 415 (491)
++..+.|+++.+++.|.........++|||++||. ||.++....+ +++++-....+.++..|+.+ +.+.+..+
T Consensus 244 ~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~P-vi~~~~~~~~-~~~~~~~~~g~~~~~~~~~~---~~~~i~~ll~ 318 (348)
T cd03820 244 KNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLP-VISFDCPTGP-SEIIEDGVNGLLVPNGDVEA---LAEALLRLME 318 (348)
T ss_pred chHHHHHHhCCEEEeCccccccCHHHHHHHHcCCC-EEEecCCCch-HhhhccCcceEEeCCCCHHH---HHHHHHHHHc
Confidence 45778899999999998776678889999999986 4555532222 23344444566777766555 44444433
Q ss_pred CHHHHHHHHHHHHHhhhceEEc
Q 011195 416 KKDEWTHMRDRLKEVQRFFEFQ 437 (491)
Q Consensus 416 ~~e~v~~Mr~~l~~v~~~f~y~ 437 (491)
.++...+|.++..++.+.|.|.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~ 340 (348)
T cd03820 319 DEELRKRMGANARESAERFSIE 340 (348)
T ss_pred CHHHHHHHHHHHHHHHHHhCHH
Confidence 5778888888887776665543
No 7
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 10 GT10 from CAZY comprises enzymes with two known activities; galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) and galactoside 3-fucosyltransferase (2.4.1.152 from EC). The galactoside 3-fucosyltransferases display similarities with the alpha-2 and alpha-6-fucosyltranferases []. The biosynthesis of the carbohydrate antigen sialyl Lewis X (sLe(x)) is dependent on the activity of an galactoside 3-fucosyltransferase. This enzyme catalyses the transfer of fucose from GDP-beta-fucose to the 3-OH of N-acetylglucosamine present in lactosamine acceptors []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) belongs to the Lewis blood group system and is associated with Le(a/b) antigen. ; GO: 0008417 fucosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 2NZX_B 2NZW_C 2NZY_C.
Probab=95.82 E-value=0.013 Score=61.29 Aligned_cols=138 Identities=15% Similarity=0.173 Sum_probs=64.0
Q ss_pred CCCCCccccCCccccccc--cC--C-CCCCCCCCe-EEEEecceecCCCcchHHHHHHHhhcCCCeEEEeCccc---CCC
Q 011195 266 ANVDKDVIAPYKHMVKSY--VN--D-TSEFDSRPI-LLYFQGAIYRKDGGSVRQELFYLLKDEKDVHFSFGSVQ---KNG 336 (491)
Q Consensus 266 ~~~~kDVviPy~~~~~~~--~~--~-~~~~~~R~~-L~~FaG~~~~~~~~~iR~~L~~~~~~~~d~~~~~g~~~---~~~ 336 (491)
++.+-||..||....... .. . .....+++. .++++.... ...-|..+++.+...-.+. ..|.+. +..
T Consensus 142 Yr~dSDi~~py~~~~~~~~~~~~~~~~~~~~~K~~~~~w~~Snc~---~~~~R~~~~~~L~~~~~vd-~yG~c~~~~~~~ 217 (349)
T PF00852_consen 142 YRRDSDIPLPYGYFSPRESPSEKDDLPNILKKKTKLAAWIVSNCN---PHSGREEYVRELSKYIPVD-SYGKCGNNNPCP 217 (349)
T ss_dssp -------------------------------TSSEEEEE--S-S-----H-HHHHHHHHHHTTS-EE-E-SSTT--SSS-
T ss_pred cccccccccccccccccccccccccccccccCCCceEEEEeeCcC---CcccHHHHHHHHHhhcCeE-ccCCCCCCCCcc
Confidence 355679999986532211 10 0 011234444 445555432 2234999999888764333 246551 112
Q ss_pred hhhhhhcccCccEEEeeC---CCCCCchhHHHHHHhCceeEEee--C-Cc--ccCCCCCCCCCcEEEEEecccccccchH
Q 011195 337 IHQASQGMHSSKFCLNIA---GDTPSSNRLFDAIASHCVPVIIS--D-EI--ELPYEDILDYSEFCIFVRTSDAVKGNFL 408 (491)
Q Consensus 337 ~~~y~~~m~~S~FCL~P~---Gds~~s~RlfDAi~aGCIPVIis--d-~~--~LPF~d~iDw~~fSV~I~e~dv~~~~~l 408 (491)
.....+.+++-+|.|+.. .....+--+|+|+.+|||||+++ . ++ .+|-...|+.+ |......|
T Consensus 218 ~~~~~~~~~~ykF~lafENs~c~dYiTEK~~~al~~g~VPI~~G~~~~~~~~~~P~~SfI~~~---------df~s~~~L 288 (349)
T PF00852_consen 218 RDCKLELLSKYKFYLAFENSNCPDYITEKFWNALLAGTVPIYWGPPRPNYEEFAPPNSFIHVD---------DFKSPKEL 288 (349)
T ss_dssp -S-HHHHHHTEEEEEEE-SS--TT---HHHHHHHHTTSEEEEES---TTHHHHS-GGGSEEGG---------GSSSHHHH
T ss_pred cccccccccCcEEEEEecCCCCCCCCCHHHHHHHHCCeEEEEECCEecccccCCCCCCccchh---------cCCCHHHH
Confidence 234788899999999965 35667899999999999999999 3 23 35655545444 44443347
Q ss_pred HHHHhcCC
Q 011195 409 INLVRNIK 416 (491)
Q Consensus 409 ~~iL~~I~ 416 (491)
.+.|+.+.
T Consensus 289 a~yl~~l~ 296 (349)
T PF00852_consen 289 ADYLKYLD 296 (349)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 77887774
No 8
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=95.60 E-value=0.022 Score=55.83 Aligned_cols=93 Identities=14% Similarity=0.158 Sum_probs=65.0
Q ss_pred hhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccchHHHHHhcC--
Q 011195 338 HQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINLVRNI-- 415 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~~l~~iL~~I-- 415 (491)
+++.+.|..|.+.++|.-.+..+..++||+++|| |||..+. -.+.+.+......+.++..|..+ +.+.|..+
T Consensus 267 ~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~-pvI~~~~--~~~~~~~~~~~~g~~~~~~~~~~---l~~~i~~~~~ 340 (374)
T cd03801 267 EDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGL-PVVASDV--GGIPEVVEDGETGLLVPPGDPEA---LAEAILRLLD 340 (374)
T ss_pred hhHHHHHHhcCEEEecchhccccchHHHHHHcCC-cEEEeCC--CChhHHhcCCcceEEeCCCCHHH---HHHHHHHHHc
Confidence 5688889999999999876667889999999997 6777765 23455555566677777776554 55444442
Q ss_pred CHHHHHHHHHHHH-HhhhceEE
Q 011195 416 KKDEWTHMRDRLK-EVQRFFEF 436 (491)
Q Consensus 416 ~~e~v~~Mr~~l~-~v~~~f~y 436 (491)
.++...+|.++.. .+...+.|
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~ 362 (374)
T cd03801 341 DPELRRRLGEAARERVAERFSW 362 (374)
T ss_pred ChHHHHHHHHHHHHHHHHhcCH
Confidence 4566777887776 45555544
No 9
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=95.34 E-value=0.11 Score=51.66 Aligned_cols=94 Identities=16% Similarity=0.228 Sum_probs=61.5
Q ss_pred hhhhhcccCccEEEeeCCCCCC-----chhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccchHHHHH
Q 011195 338 HQASQGMHSSKFCLNIAGDTPS-----SNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINLV 412 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds~~-----s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~~l~~iL 412 (491)
+++.+.|..+.++++|...+.. ...+.||+++|| |||.++.-..+ +.+.-....+.++..|+.+ +.+.|
T Consensus 286 ~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~-pvi~~~~~~~~--~~~~~~~~g~~~~~~~~~~---l~~~i 359 (394)
T cd03794 286 EELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGK-PVLASVDGESA--ELVEEAGAGLVVPPGDPEA---LAAAI 359 (394)
T ss_pred HHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCC-cEEEecCCCch--hhhccCCcceEeCCCCHHH---HHHHH
Confidence 4677889999999999876543 556899999996 88887754222 1222224455666666554 44444
Q ss_pred hcC--CHHHHHHHHHHHHHhhh-ceEEc
Q 011195 413 RNI--KKDEWTHMRDRLKEVQR-FFEFQ 437 (491)
Q Consensus 413 ~~I--~~e~v~~Mr~~l~~v~~-~f~y~ 437 (491)
..+ .++++.+|.++..+... +|.|.
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 387 (394)
T cd03794 360 LELLDDPEERAEMGENGRRYVEEKFSRE 387 (394)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHhhcHH
Confidence 443 67888888887766544 55443
No 10
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=95.25 E-value=0.19 Score=54.11 Aligned_cols=94 Identities=15% Similarity=0.184 Sum_probs=67.2
Q ss_pred hhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCC---CcEEEEEecccccccchHHHHHhc
Q 011195 338 HQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDY---SEFCIFVRTSDAVKGNFLINLVRN 414 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw---~~fSV~I~e~dv~~~~~l~~iL~~ 414 (491)
++..+.|+.+..++.|......+.-++|||++| +|||.++.-- ..++++- ....+.++..|..+ +.+.|..
T Consensus 323 ~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G-~PVI~s~~gg--~~eiv~~~~~~~~G~lv~~~d~~~---la~~i~~ 396 (465)
T PLN02871 323 DELSQAYASGDVFVMPSESETLGFVVLEAMASG-VPVVAARAGG--IPDIIPPDQEGKTGFLYTPGDVDD---CVEKLET 396 (465)
T ss_pred HHHHHHHHHCCEEEECCcccccCcHHHHHHHcC-CCEEEcCCCC--cHhhhhcCCCCCceEEeCCCCHHH---HHHHHHH
Confidence 467888999999999988777788999999999 8999887532 2344433 56677777777655 4333332
Q ss_pred C--CHHHHHHHHHHHHHhhhceEEc
Q 011195 415 I--KKDEWTHMRDRLKEVQRFFEFQ 437 (491)
Q Consensus 415 I--~~e~v~~Mr~~l~~v~~~f~y~ 437 (491)
+ .++...+|.++..+....|.|.
T Consensus 397 ll~~~~~~~~~~~~a~~~~~~fsw~ 421 (465)
T PLN02871 397 LLADPELRERMGAAAREEVEKWDWR 421 (465)
T ss_pred HHhCHHHHHHHHHHHHHHHHhCCHH
Confidence 2 5777788888887766665554
No 11
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=95.14 E-value=0.018 Score=52.38 Aligned_cols=84 Identities=17% Similarity=0.222 Sum_probs=51.1
Q ss_pred hhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccchHHHHHhcCC-
Q 011195 338 HQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINLVRNIK- 416 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~~l~~iL~~I~- 416 (491)
.++.+.++.|.+.++|......+..+.|||.+|| |||.++.- .+.+.+.=..-.+.++..++.+ +.+.+..+-
T Consensus 84 ~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~-pvI~~~~~--~~~e~~~~~~~g~~~~~~~~~~---l~~~i~~~l~ 157 (172)
T PF00534_consen 84 DELDELYKSSDIFVSPSRNEGFGLSLLEAMACGC-PVIASDIG--GNNEIINDGVNGFLFDPNDIEE---LADAIEKLLN 157 (172)
T ss_dssp HHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT--EEEEESST--HHHHHSGTTTSEEEESTTSHHH---HHHHHHHHHH
T ss_pred cccccccccceecccccccccccccccccccccc-ceeecccc--CCceeeccccceEEeCCCCHHH---HHHHHHHHHC
Confidence 4678889999999999988888999999999999 66667632 2222222222345565555554 444444433
Q ss_pred -HHHHHHHHHHH
Q 011195 417 -KDEWTHMRDRL 427 (491)
Q Consensus 417 -~e~v~~Mr~~l 427 (491)
++....|.++.
T Consensus 158 ~~~~~~~l~~~~ 169 (172)
T PF00534_consen 158 DPELRQKLGKNA 169 (172)
T ss_dssp HHHHHHHHHHHH
T ss_pred CHHHHHHHHHHh
Confidence 24455555544
No 12
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=94.90 E-value=0.21 Score=52.22 Aligned_cols=118 Identities=19% Similarity=0.189 Sum_probs=71.8
Q ss_pred hHHHHHHHhhc--CCCeEEEeCcccCCChhhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCC
Q 011195 311 VRQELFYLLKD--EKDVHFSFGSVQKNGIHQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDIL 388 (491)
Q Consensus 311 iR~~L~~~~~~--~~d~~~~~g~~~~~~~~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~i 388 (491)
.++.+.+.+.. ..+.....|... .+++.+.|+.|..++.|.-....+..++|||++|| |||.++.- +..+++
T Consensus 266 ~~~~~~~~~~~~~~~~~V~f~G~v~---~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~-PVIas~~~--g~~e~i 339 (396)
T cd03818 266 WKQHMLDELGGRLDLSRVHFLGRVP---YDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGC-LVVGSDTA--PVREVI 339 (396)
T ss_pred HHHHHHHHhhcccCcceEEEeCCCC---HHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCC-CEEEcCCC--Cchhhc
Confidence 45566555543 122222235432 24677888899988888655545678999999998 88877643 445666
Q ss_pred CCCcEEEEEecccccccc-hHHHHHhcCCHHHHHHHHHHHHHhh-hceEE
Q 011195 389 DYSEFCIFVRTSDAVKGN-FLINLVRNIKKDEWTHMRDRLKEVQ-RFFEF 436 (491)
Q Consensus 389 Dw~~fSV~I~e~dv~~~~-~l~~iL~~I~~e~v~~Mr~~l~~v~-~~f~y 436 (491)
.-..-.+.++..|..... .|.++|. .+++..+|.++.++.. .+|.|
T Consensus 340 ~~~~~G~lv~~~d~~~la~~i~~ll~--~~~~~~~l~~~ar~~~~~~fs~ 387 (396)
T cd03818 340 TDGENGLLVDFFDPDALAAAVIELLD--DPARRARLRRAARRTALRYDLL 387 (396)
T ss_pred ccCCceEEcCCCCHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHhccH
Confidence 655556777776655411 1334443 3567778877776543 33544
No 13
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=94.85 E-value=0.037 Score=55.35 Aligned_cols=92 Identities=20% Similarity=0.207 Sum_probs=63.3
Q ss_pred hhhhhcccCccEEEeeCCCC--CCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccchHHHHHhcC
Q 011195 338 HQASQGMHSSKFCLNIAGDT--PSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINLVRNI 415 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds--~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~~l~~iL~~I 415 (491)
++..+.|+.+.+++.|.... ..+..+.|||++|| |||.++.-. .+.+.+. .-.+.++..|+.+ +.+.|..+
T Consensus 259 ~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~-PvI~~~~~~--~~~i~~~-~~g~~~~~~d~~~---~~~~l~~l 331 (366)
T cd03822 259 EELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGK-PVISTPVGH--AEEVLDG-GTGLLVPPGDPAA---LAEAIRRL 331 (366)
T ss_pred HHHHHHHhhcCEEEecccccccccchHHHHHHHcCC-CEEecCCCC--hheeeeC-CCcEEEcCCCHHH---HHHHHHHH
Confidence 45778899999999998777 77888999999999 999887532 3333333 3345566666544 44333332
Q ss_pred --CHHHHHHHHHHHHHhhhceEE
Q 011195 416 --KKDEWTHMRDRLKEVQRFFEF 436 (491)
Q Consensus 416 --~~e~v~~Mr~~l~~v~~~f~y 436 (491)
.+++..+|+++..+..+.+.|
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~s~ 354 (366)
T cd03822 332 LADPELAQALRARAREYARAMSW 354 (366)
T ss_pred HcChHHHHHHHHHHHHHHhhCCH
Confidence 356788899888877666444
No 14
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=94.68 E-value=0.27 Score=52.47 Aligned_cols=135 Identities=15% Similarity=0.177 Sum_probs=76.5
Q ss_pred CeEEEEecceecCCCcchHHHHHHHhhcC--CC-eEEEeCcccCCChhhhhhcccCccEEEeeCCCCCCchhHHHHHHhC
Q 011195 294 PILLYFQGAIYRKDGGSVRQELFYLLKDE--KD-VHFSFGSVQKNGIHQASQGMHSSKFCLNIAGDTPSSNRLFDAIASH 370 (491)
Q Consensus 294 ~~L~~FaG~~~~~~~~~iR~~L~~~~~~~--~d-~~~~~g~~~~~~~~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aG 370 (491)
++-+.++|+.+...+...+..|.++.++. .+ +.+ .|.. ..++..+.|+.|..++.|.=+...+..++|||++|
T Consensus 273 ~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f-~g~v---~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G 348 (419)
T cd03806 273 KIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEF-VVNA---PFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAG 348 (419)
T ss_pred ceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEE-ecCC---CHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcC
Confidence 46677777643222223344444443321 12 222 2432 23467888999999999876666788999999999
Q ss_pred ceeEEeeCCcccCCCCCCC---CCcEEEEEecccccccc-hHHHHHhcCCHHHHHHHHHHHHHhhhceEEc
Q 011195 371 CVPVIISDEIELPYEDILD---YSEFCIFVRTSDAVKGN-FLINLVRNIKKDEWTHMRDRLKEVQRFFEFQ 437 (491)
Q Consensus 371 CIPVIisd~~~LPF~d~iD---w~~fSV~I~e~dv~~~~-~l~~iL~~I~~e~v~~Mr~~l~~v~~~f~y~ 437 (491)
|.||. ++. --|.++++. -..-.+.+. |..+.. .|.++|+ .++++...|+++-+++..+|.+.
T Consensus 349 ~pvIa-~~~-ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~-~~~~~~~~~~~~~~~~~~~fs~~ 414 (419)
T cd03806 349 LIPLA-HAS-GGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILS-LSEEERLRIRRAARSSVKRFSDE 414 (419)
T ss_pred CcEEE-EcC-CCCchheeeccCCCCceEEeC--CHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHhhCHH
Confidence 96664 442 135566654 233333332 333211 1334443 36666667777777777776554
No 15
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=94.37 E-value=0.25 Score=50.77 Aligned_cols=93 Identities=16% Similarity=0.132 Sum_probs=61.1
Q ss_pred hhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccchHHHHHhcC--
Q 011195 338 HQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINLVRNI-- 415 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~~l~~iL~~I-- 415 (491)
.+..+.|+.|..+++|.-.......++|||++|| |||.+|.-. ..+++.-......++..|..+ +.+.|..+
T Consensus 264 ~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~-Pvv~s~~~g--~~e~i~~~~~g~~~~~~d~~~---la~~i~~l~~ 337 (374)
T TIGR03088 264 DDVPALMQALDLFVLPSLAEGISNTILEAMASGL-PVIATAVGG--NPELVQHGVTGALVPPGDAVA---LARALQPYVS 337 (374)
T ss_pred CCHHHHHHhcCEEEeccccccCchHHHHHHHcCC-CEEEcCCCC--cHHHhcCCCceEEeCCCCHHH---HHHHHHHHHh
Confidence 3567888899998888766666888999999996 999987532 344555555667777766654 44333322
Q ss_pred CHHHHHHHHHHHHHh-hhceEE
Q 011195 416 KKDEWTHMRDRLKEV-QRFFEF 436 (491)
Q Consensus 416 ~~e~v~~Mr~~l~~v-~~~f~y 436 (491)
.+++..+|.++.++. ..+|.|
T Consensus 338 ~~~~~~~~~~~a~~~~~~~fs~ 359 (374)
T TIGR03088 338 DPAARRAHGAAGRARAEQQFSI 359 (374)
T ss_pred CHHHHHHHHHHHHHHHHHhCCH
Confidence 455666676655543 345544
No 16
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=94.06 E-value=0.12 Score=52.09 Aligned_cols=93 Identities=15% Similarity=0.167 Sum_probs=63.5
Q ss_pred hhhhhcccCccEEEeeC-CCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccchHHHHH---h
Q 011195 338 HQASQGMHSSKFCLNIA-GDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINLV---R 413 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~-Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~~l~~iL---~ 413 (491)
.+..+.|..|..++.|. -.......++|||++|| |||.++. -+..+.+.-....+.++..|+.. +.+.| .
T Consensus 255 ~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~-PvI~~~~--~~~~e~i~~~~~g~~~~~~~~~~---l~~~i~~~~ 328 (355)
T cd03819 255 SDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGR-PVIASDH--GGARETVRPGETGLLVPPGDAEA---LAQALDQIL 328 (355)
T ss_pred ccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCC-CEEEcCC--CCcHHHHhCCCceEEeCCCCHHH---HHHHHHHHH
Confidence 45778899999999987 34445678999999999 7877764 23455555555566677777665 44433 2
Q ss_pred cCCHHHHHHHHHHHHHhh-hceEE
Q 011195 414 NIKKDEWTHMRDRLKEVQ-RFFEF 436 (491)
Q Consensus 414 ~I~~e~v~~Mr~~l~~v~-~~f~y 436 (491)
..++++..+|.++.++.. .+|.|
T Consensus 329 ~~~~~~~~~~~~~a~~~~~~~f~~ 352 (355)
T cd03819 329 SLLPEGRAKMFAKARMCVETLFSY 352 (355)
T ss_pred hhCHHHHHHHHHHHHHHHHHhhhh
Confidence 346788888888877643 44544
No 17
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=93.94 E-value=0.11 Score=51.05 Aligned_cols=92 Identities=14% Similarity=0.146 Sum_probs=59.3
Q ss_pred hhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccchHHHHHhcC--
Q 011195 338 HQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINLVRNI-- 415 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~~l~~iL~~I-- 415 (491)
++..+.++.|.+++.|......+..++|||++|| |||.++.-.. .+.+.=....+.++..|..+ +.+.+..+
T Consensus 255 ~~~~~~~~~adi~i~ps~~e~~~~~~~Ea~~~G~-Pvi~s~~~~~--~~~i~~~~~g~~~~~~~~~~---~~~~i~~l~~ 328 (359)
T cd03808 255 DDVPELLAAADVFVLPSYREGLPRVLLEAMAMGR-PVIATDVPGC--REAVIDGVNGFLVPPGDAEA---LADAIERLIE 328 (359)
T ss_pred ccHHHHHHhccEEEecCcccCcchHHHHHHHcCC-CEEEecCCCc--hhhhhcCcceEEECCCCHHH---HHHHHHHHHh
Confidence 3466788999999999877667889999999995 7887764322 33343234456666666544 44333332
Q ss_pred CHHHHHHHHHHHHHh-hhceE
Q 011195 416 KKDEWTHMRDRLKEV-QRFFE 435 (491)
Q Consensus 416 ~~e~v~~Mr~~l~~v-~~~f~ 435 (491)
.++.+.+|.++..+. ..++.
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~s 349 (359)
T cd03808 329 DPELRARMGQAARKRAEEEFD 349 (359)
T ss_pred CHHHHHHHHHHHHHHHHHhcC
Confidence 456677777666554 44443
No 18
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=93.74 E-value=0.6 Score=47.32 Aligned_cols=94 Identities=17% Similarity=0.211 Sum_probs=60.1
Q ss_pred hhhhhcccCccEEEeeCCC------CCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccchHHHH
Q 011195 338 HQASQGMHSSKFCLNIAGD------TPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINL 411 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gd------s~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~~l~~i 411 (491)
++..+.+..|...+.|.-. ......++|||++|| |||.++.-- ..+.+.-....+.++..|+.+ +.+.
T Consensus 256 ~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~-PvI~s~~~~--~~e~i~~~~~g~~~~~~d~~~---l~~~ 329 (367)
T cd05844 256 AEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGV-PVVATRHGG--IPEAVEDGETGLLVPEGDVAA---LAAA 329 (367)
T ss_pred HHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCC-CEEEeCCCC--chhheecCCeeEEECCCCHHH---HHHH
Confidence 4567788888888887532 224678999999996 999887643 234444455667777767655 4333
Q ss_pred HhcC--CHHHHHHHHHHHHH-hhhceEEc
Q 011195 412 VRNI--KKDEWTHMRDRLKE-VQRFFEFQ 437 (491)
Q Consensus 412 L~~I--~~e~v~~Mr~~l~~-v~~~f~y~ 437 (491)
|..+ .++...+|.++..+ +.++|.|.
T Consensus 330 i~~l~~~~~~~~~~~~~a~~~~~~~~s~~ 358 (367)
T cd05844 330 LGRLLADPDLRARMGAAGRRRVEERFDLR 358 (367)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHCCHH
Confidence 3322 45667788776655 34555553
No 19
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=93.70 E-value=0.12 Score=52.50 Aligned_cols=92 Identities=13% Similarity=0.217 Sum_probs=62.1
Q ss_pred hhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccchHHHHHhcC--C
Q 011195 339 QASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINLVRNI--K 416 (491)
Q Consensus 339 ~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~~l~~iL~~I--~ 416 (491)
+..+.|..+..++.|.-.......+.|||++| +|||.++.-. ..+++.-..-...++..|+.+ +.+.+..+ .
T Consensus 263 ~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g-~PvI~s~~~~--~~e~i~~~~~G~~~~~~~~~~---l~~~i~~l~~~ 336 (371)
T cd04962 263 HVEELLSIADLFLLPSEKESFGLAALEAMACG-VPVVASNAGG--IPEVVKHGETGFLVDVGDVEA---MAEYALSLLED 336 (371)
T ss_pred cHHHHHHhcCEEEeCCCcCCCccHHHHHHHcC-CCEEEeCCCC--chhhhcCCCceEEcCCCCHHH---HHHHHHHHHhC
Confidence 56788999999999976655678899999999 7888887542 334444433445566666544 33333222 5
Q ss_pred HHHHHHHHHHHHHh-hhceEE
Q 011195 417 KDEWTHMRDRLKEV-QRFFEF 436 (491)
Q Consensus 417 ~e~v~~Mr~~l~~v-~~~f~y 436 (491)
++.+.+|+++..+. ..+|.|
T Consensus 337 ~~~~~~~~~~~~~~~~~~fs~ 357 (371)
T cd04962 337 DELWQEFSRAARNRAAERFDS 357 (371)
T ss_pred HHHHHHHHHHHHHHHHHhCCH
Confidence 77888899888765 555544
No 20
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=93.46 E-value=0.11 Score=53.19 Aligned_cols=95 Identities=14% Similarity=0.069 Sum_probs=62.8
Q ss_pred hhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccc-hHHHHHhcCC
Q 011195 338 HQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGN-FLINLVRNIK 416 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~-~l~~iL~~I~ 416 (491)
.+..+.+..|..+++|.-.......++|||++| +|||.++.- ...+.+.-....+.++..|..+.. .|.+++. .
T Consensus 294 ~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G-~Pvi~s~~~--~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~--~ 368 (398)
T cd03800 294 EDLPALYRAADVFVNPALYEPFGLTALEAMACG-LPVVATAVG--GPRDIVVDGVTGLLVDPRDPEALAAALRRLLT--D 368 (398)
T ss_pred HHHHHHHHhCCEEEecccccccCcHHHHHHhcC-CCEEECCCC--CHHHHccCCCCeEEeCCCCHHHHHHHHHHHHh--C
Confidence 356777889999999987666677899999999 599988743 233444444556667666654411 1233333 4
Q ss_pred HHHHHHHHHHHHHhh-hceEEc
Q 011195 417 KDEWTHMRDRLKEVQ-RFFEFQ 437 (491)
Q Consensus 417 ~e~v~~Mr~~l~~v~-~~f~y~ 437 (491)
++++.+|.++..+.. ++|.|.
T Consensus 369 ~~~~~~~~~~a~~~~~~~~s~~ 390 (398)
T cd03800 369 PALRRRLSRAGLRRARARYTWE 390 (398)
T ss_pred HHHHHHHHHHHHHHHHHhCCHH
Confidence 777888888776644 666543
No 21
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=93.25 E-value=0.11 Score=53.60 Aligned_cols=89 Identities=20% Similarity=0.382 Sum_probs=62.8
Q ss_pred hhhhhcccCccEEEeeCCCC-----------CCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccc
Q 011195 338 HQASQGMHSSKFCLNIAGDT-----------PSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGN 406 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds-----------~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~ 406 (491)
++..+.++. .|+|++.+++ ..-..++++|++| +|||.++.-.++ +++.=....+.++ ++.+
T Consensus 218 eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G-~PVI~~~~~~~~--~~V~~~~~G~~v~--~~~e-- 289 (333)
T PRK09814 218 EELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAG-LPVIVWSKAAIA--DFIVENGLGFVVD--SLEE-- 289 (333)
T ss_pred HHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCC-CCEEECCCccHH--HHHHhCCceEEeC--CHHH--
Confidence 345555655 8999988762 1234588899988 699998764333 4444455566665 3333
Q ss_pred hHHHHHhcCCHHHHHHHHHHHHHhhhceE
Q 011195 407 FLINLVRNIKKDEWTHMRDRLKEVQRFFE 435 (491)
Q Consensus 407 ~l~~iL~~I~~e~v~~Mr~~l~~v~~~f~ 435 (491)
+.+.|..++++++.+|+++.+++.+.+-
T Consensus 290 -l~~~l~~~~~~~~~~m~~n~~~~~~~~~ 317 (333)
T PRK09814 290 -LPEIIDNITEEEYQEMVENVKKISKLLR 317 (333)
T ss_pred -HHHHHHhcCHHHHHHHHHHHHHHHHHHh
Confidence 8888989999999999999999887754
No 22
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=93.16 E-value=0.17 Score=52.74 Aligned_cols=95 Identities=13% Similarity=0.040 Sum_probs=63.3
Q ss_pred hhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccc-hHHHHHhcCC
Q 011195 338 HQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGN-FLINLVRNIK 416 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~-~l~~iL~~I~ 416 (491)
++..+.|+.+..++.|.=....+..+.|||++|| |||.++.-- ..+++.=....+.++..|..... .|.++|. .
T Consensus 294 ~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~-Pvi~~~~~~--~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~--~ 368 (405)
T TIGR03449 294 EELVHVYRAADVVAVPSYNESFGLVAMEAQACGT-PVVAARVGG--LPVAVADGETGLLVDGHDPADWADALARLLD--D 368 (405)
T ss_pred HHHHHHHHhCCEEEECCCCCCcChHHHHHHHcCC-CEEEecCCC--cHhhhccCCceEECCCCCHHHHHHHHHHHHh--C
Confidence 4567889999999988655556778999999996 888877432 22344434456667766665421 1334443 4
Q ss_pred HHHHHHHHHHHHHhhhceEEc
Q 011195 417 KDEWTHMRDRLKEVQRFFEFQ 437 (491)
Q Consensus 417 ~e~v~~Mr~~l~~v~~~f~y~ 437 (491)
++...+|.++..+..+.|.|.
T Consensus 369 ~~~~~~~~~~~~~~~~~fsw~ 389 (405)
T TIGR03449 369 PRTRIRMGAAAVEHAAGFSWA 389 (405)
T ss_pred HHHHHHHHHHHHHHHHhCCHH
Confidence 677788888887766666554
No 23
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=93.07 E-value=0.15 Score=51.00 Aligned_cols=92 Identities=12% Similarity=0.157 Sum_probs=61.3
Q ss_pred hhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccchHHHHHhc-C-
Q 011195 338 HQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINLVRN-I- 415 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~~l~~iL~~-I- 415 (491)
.++.+.+..+.+++.|.-....+..++|||++|| |||.++.-. ..+.++ +..+.++..+..+ +.+.|.. +
T Consensus 264 ~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~-pvI~~~~~~--~~e~~~--~~~~~~~~~~~~~---~~~~i~~l~~ 335 (365)
T cd03809 264 EELAALYRGARAFVFPSLYEGFGLPVLEAMACGT-PVIASNISS--LPEVAG--DAALYFDPLDPEA---LAAAIERLLE 335 (365)
T ss_pred hHHHHHHhhhhhhcccchhccCCCCHHHHhcCCC-cEEecCCCC--ccceec--CceeeeCCCCHHH---HHHHHHHHhc
Confidence 4577889999999998755545778999999997 777776422 233332 3455566666554 4444443 2
Q ss_pred CHHHHHHHHHHHHHhhhceEEc
Q 011195 416 KKDEWTHMRDRLKEVQRFFEFQ 437 (491)
Q Consensus 416 ~~e~v~~Mr~~l~~v~~~f~y~ 437 (491)
.++...+|.++.+++...+.|.
T Consensus 336 ~~~~~~~~~~~~~~~~~~~sw~ 357 (365)
T cd03809 336 DPALREELRERGLARAKRFSWE 357 (365)
T ss_pred CHHHHHHHHHHHHHHHHhCCHH
Confidence 5777788888777777666554
No 24
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=93.04 E-value=0.55 Score=48.27 Aligned_cols=94 Identities=12% Similarity=0.129 Sum_probs=60.9
Q ss_pred hhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccc------cccchHHHH
Q 011195 338 HQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDA------VKGNFLINL 411 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv------~~~~~l~~i 411 (491)
.+..+.|..|..++.|.-.......+.|||++|| |||.++.-.. .+++.-....+.++..|. .. +.+.
T Consensus 272 ~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~-PvI~s~~~~~--~e~i~~~~~G~~~~~~~~~~~~~~~~---l~~~ 345 (388)
T TIGR02149 272 EELVELLSNAEVFVCPSIYEPLGIVNLEAMACGT-PVVASATGGI--PEVVVDGETGFLVPPDNSDADGFQAE---LAKA 345 (388)
T ss_pred HHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCC-CEEEeCCCCH--HHHhhCCCceEEcCCCCCcccchHHH---HHHH
Confidence 4567888999999999766666778999999998 8998875322 234433344555665554 22 3333
Q ss_pred HhcC--CHHHHHHHHHHHHH-hhhceEEc
Q 011195 412 VRNI--KKDEWTHMRDRLKE-VQRFFEFQ 437 (491)
Q Consensus 412 L~~I--~~e~v~~Mr~~l~~-v~~~f~y~ 437 (491)
|..+ .+++..+|.++..+ +.+.|.|.
T Consensus 346 i~~l~~~~~~~~~~~~~a~~~~~~~~s~~ 374 (388)
T TIGR02149 346 INILLADPELAKKMGIAGRKRAEEEFSWG 374 (388)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHhCCHH
Confidence 3322 56777888877665 34555543
No 25
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=92.90 E-value=0.14 Score=50.43 Aligned_cols=92 Identities=13% Similarity=0.186 Sum_probs=57.1
Q ss_pred hhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccchHHHHHhcC--
Q 011195 338 HQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINLVRNI-- 415 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~~l~~iL~~I-- 415 (491)
.+..+.|..+..+++|......+..+.|||++|| |||.++.-.. .+.+.- ..+.++..+..+ +.+.+..+
T Consensus 260 ~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g~-PvI~~~~~~~--~e~~~~--~g~~~~~~~~~~---l~~~i~~l~~ 331 (365)
T cd03807 260 SDVPALLNALDVFVLSSLSEGFPNVLLEAMACGL-PVVATDVGDN--AELVGD--TGFLVPPGDPEA---LAEAIEALLA 331 (365)
T ss_pred ccHHHHHHhCCEEEeCCccccCCcHHHHHHhcCC-CEEEcCCCCh--HHHhhc--CCEEeCCCCHHH---HHHHHHHHHh
Confidence 3466788999999999887767889999999996 7887764221 222221 345565555444 33333222
Q ss_pred CHHHHHHHHHHHHH-hhhceEEc
Q 011195 416 KKDEWTHMRDRLKE-VQRFFEFQ 437 (491)
Q Consensus 416 ~~e~v~~Mr~~l~~-v~~~f~y~ 437 (491)
.++++.+|.++..+ +.+.|.|.
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~s~~ 354 (365)
T cd03807 332 DPALRQALGEAARERIEENFSIE 354 (365)
T ss_pred ChHHHHHHHHHHHHHHHHhCCHH
Confidence 24666777666654 34455543
No 26
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=92.90 E-value=0.99 Score=47.92 Aligned_cols=93 Identities=19% Similarity=0.257 Sum_probs=62.5
Q ss_pred hhhhhcccCccEEEeeCCC------CCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccchHHHH
Q 011195 338 HQASQGMHSSKFCLNIAGD------TPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINL 411 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gd------s~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~~l~~i 411 (491)
++..+.++.+..++.|.=. ......+.|||++|| |||.++.--.| +++.-..-.+.+++.|... +.+.
T Consensus 290 ~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~-PVI~t~~~g~~--E~v~~~~~G~lv~~~d~~~---la~a 363 (406)
T PRK15427 290 HEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGI-PVVSTLHSGIP--ELVEADKSGWLVPENDAQA---LAQR 363 (406)
T ss_pred HHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCC-CEEEeCCCCch--hhhcCCCceEEeCCCCHHH---HHHH
Confidence 4577889999999998521 223567999999995 99988754333 4454455566788777765 4444
Q ss_pred Hhc---CCHHHHHHHHHHHHH-hhhceEE
Q 011195 412 VRN---IKKDEWTHMRDRLKE-VQRFFEF 436 (491)
Q Consensus 412 L~~---I~~e~v~~Mr~~l~~-v~~~f~y 436 (491)
|.. .++++..+|.++.++ +..+|-|
T Consensus 364 i~~l~~~d~~~~~~~~~~ar~~v~~~f~~ 392 (406)
T PRK15427 364 LAAFSQLDTDELAPVVKRAREKVETDFNQ 392 (406)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHhcCH
Confidence 433 367778888888765 4455544
No 27
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=92.78 E-value=0.77 Score=46.03 Aligned_cols=92 Identities=13% Similarity=0.147 Sum_probs=55.2
Q ss_pred hhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccch-HHHHHhcCCH
Q 011195 339 QASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNF-LINLVRNIKK 417 (491)
Q Consensus 339 ~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~~-l~~iL~~I~~ 417 (491)
+..+.|..+.+.+.|.........++|||++|| |||.+|.-. ..+.+.-. ...++..|+.+... +.++| ..++
T Consensus 255 ~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~-PvI~~~~~~--~~e~i~~~--g~~~~~~~~~~~~~~i~~ll-~~~~ 328 (360)
T cd04951 255 DIAAYYNAADLFVLSSAWEGFGLVVAEAMACEL-PVVATDAGG--VREVVGDS--GLIVPISDPEALANKIDEIL-KMSG 328 (360)
T ss_pred cHHHHHHhhceEEecccccCCChHHHHHHHcCC-CEEEecCCC--hhhEecCC--ceEeCCCCHHHHHHHHHHHH-hCCH
Confidence 456778899999999877667889999999999 888876421 12222212 33445555544211 22333 2355
Q ss_pred HHHHHHHHHHHHhhhceEE
Q 011195 418 DEWTHMRDRLKEVQRFFEF 436 (491)
Q Consensus 418 e~v~~Mr~~l~~v~~~f~y 436 (491)
+....|.++-..+...|.|
T Consensus 329 ~~~~~~~~~~~~~~~~~s~ 347 (360)
T cd04951 329 EERDIIGARRERIVKKFSI 347 (360)
T ss_pred HHHHHHHHHHHHHHHhcCH
Confidence 6666666653345555544
No 28
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=92.45 E-value=0.22 Score=49.28 Aligned_cols=92 Identities=12% Similarity=0.248 Sum_probs=57.6
Q ss_pred hhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccchHHHHHhcC--
Q 011195 338 HQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINLVRNI-- 415 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~~l~~iL~~I-- 415 (491)
++..+.+..+.++++|.-....+..++|||++|| |||.++..- ..+.+.- ...+.++.+ ..+ +.+.+..+
T Consensus 273 ~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~~--~~~~~~~-~~~~~~~~~-~~~---~~~~i~~l~~ 344 (375)
T cd03821 273 EDKAAALADADLFVLPSHSENFGIVVAEALACGT-PVVTTDKVP--WQELIEY-GCGWVVDDD-VDA---LAAALRRALE 344 (375)
T ss_pred HHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCC-CEEEcCCCC--HHHHhhc-CceEEeCCC-hHH---HHHHHHHHHh
Confidence 3567788999999999876667888999999996 888877432 2233322 334444433 222 33222222
Q ss_pred CHHHHHHHHHHHHHh-hhceEEc
Q 011195 416 KKDEWTHMRDRLKEV-QRFFEFQ 437 (491)
Q Consensus 416 ~~e~v~~Mr~~l~~v-~~~f~y~ 437 (491)
.+++..+|.++.++. .+++.|.
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~s~~ 367 (375)
T cd03821 345 LPQRLKAMGENGRALVEERFSWT 367 (375)
T ss_pred CHHHHHHHHHHHHHHHHHhcCHH
Confidence 236778888877765 5655543
No 29
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=92.05 E-value=0.33 Score=48.12 Aligned_cols=88 Identities=16% Similarity=0.087 Sum_probs=58.9
Q ss_pred hhhhhcccCccEEEeeCC-CCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccch-HHHHHhcC
Q 011195 338 HQASQGMHSSKFCLNIAG-DTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNF-LINLVRNI 415 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~G-ds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~~-l~~iL~~I 415 (491)
++..+.+..+..+++|.- .......++|||++| +|||.++.- ...+.++.....+.++..|+.+... +.+++.
T Consensus 254 ~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G-~Pvi~~~~~--~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~-- 328 (359)
T cd03823 254 EEIDDFYAEIDVLVVPSIWPENFPLVIREALAAG-VPVIASDIG--GMAELVRDGVNGLLFPPGDAEDLAAALERLID-- 328 (359)
T ss_pred HHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCC-CCEEECCCC--CHHHHhcCCCcEEEECCCCHHHHHHHHHHHHh--
Confidence 567788999999999974 344677899999999 677777642 2344455555677777777654211 333333
Q ss_pred CHHHHHHHHHHHHHh
Q 011195 416 KKDEWTHMRDRLKEV 430 (491)
Q Consensus 416 ~~e~v~~Mr~~l~~v 430 (491)
.++...+|+++..+.
T Consensus 329 ~~~~~~~~~~~~~~~ 343 (359)
T cd03823 329 DPDLLERLRAGIEPP 343 (359)
T ss_pred ChHHHHHHHHhHHHh
Confidence 577777787766543
No 30
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=91.50 E-value=0.25 Score=48.65 Aligned_cols=94 Identities=15% Similarity=0.132 Sum_probs=56.2
Q ss_pred hhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccchHHHHHhcC-C
Q 011195 338 HQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINLVRNI-K 416 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~~l~~iL~~I-~ 416 (491)
.+..+.+.+|.++++|......+..++||+++|| |||.++.-. ..+.+.-....+.+...+..+ +.+.|..+ .
T Consensus 270 ~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~-pvI~~~~~~--~~~~~~~~~~g~~~~~~~~~~---l~~~i~~~~~ 343 (377)
T cd03798 270 EEVPAYYAAADVFVLPSLREGFGLVLLEAMACGL-PVVATDVGG--IPEIITDGENGLLVPPGDPEA---LAEAILRLLA 343 (377)
T ss_pred HHHHHHHHhcCeeecchhhccCChHHHHHHhcCC-CEEEecCCC--hHHHhcCCcceeEECCCCHHH---HHHHHHHHhc
Confidence 4577889999999999877767889999999998 677776432 123333344345666666554 33333222 1
Q ss_pred HHHHHHHHHHHHHhhhceEEc
Q 011195 417 KDEWTHMRDRLKEVQRFFEFQ 437 (491)
Q Consensus 417 ~e~v~~Mr~~l~~v~~~f~y~ 437 (491)
..+....++....+...+.|.
T Consensus 344 ~~~~~~~~~~~~~~~~~~s~~ 364 (377)
T cd03798 344 DPWLRLGRAARRRVAERFSWE 364 (377)
T ss_pred CcHHHHhHHHHHHHHHHhhHH
Confidence 111133344444455555443
No 31
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=91.42 E-value=1.3 Score=46.40 Aligned_cols=94 Identities=12% Similarity=0.132 Sum_probs=56.2
Q ss_pred hhhhhcccCccEEEeeCCC-CCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEE-EEecccccccchHHHHH-hc
Q 011195 338 HQASQGMHSSKFCLNIAGD-TPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCI-FVRTSDAVKGNFLINLV-RN 414 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gd-s~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV-~I~e~dv~~~~~l~~iL-~~ 414 (491)
++..+.++.|..+++|..+ .....-++|||++| +|||.++.--. .+++.-..-.. .++..|... +.+.| +-
T Consensus 268 ~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G-~PVI~s~~gg~--~Eiv~~~~~G~~l~~~~d~~~---la~~I~~l 341 (380)
T PRK15484 268 EKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAG-KPVLASTKGGI--TEFVLEGITGYHLAEPMTSDS---IISDINRT 341 (380)
T ss_pred HHHHHHHHhCCEEEeCCCCccccccHHHHHHHcC-CCEEEeCCCCc--HhhcccCCceEEEeCCCCHHH---HHHHHHHH
Confidence 4567788999999999864 45567899999999 78998875322 23332222222 344445443 33222 22
Q ss_pred CCHHHHHHHHHHHHH-hhhceEEc
Q 011195 415 IKKDEWTHMRDRLKE-VQRFFEFQ 437 (491)
Q Consensus 415 I~~e~v~~Mr~~l~~-v~~~f~y~ 437 (491)
+...+..+|.++.++ +..+|.|.
T Consensus 342 l~d~~~~~~~~~ar~~~~~~fsw~ 365 (380)
T PRK15484 342 LADPELTQIAEQAKDFVFSKYSWE 365 (380)
T ss_pred HcCHHHHHHHHHHHHHHHHhCCHH
Confidence 233345667776654 45666654
No 32
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=91.31 E-value=0.57 Score=47.66 Aligned_cols=63 Identities=14% Similarity=-0.011 Sum_probs=43.1
Q ss_pred hhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccc
Q 011195 338 HQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVK 404 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~ 404 (491)
++..+.++.+..++.|.- ...+..++|||++|| |||.++.--. .+.+.=.+..+.++..+...
T Consensus 253 ~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~-Pvi~~~~~~~--~e~i~~~~~G~~~~~~~~~~ 315 (351)
T cd03804 253 EELRDLYARARAFLFPAE-EDFGIVPVEAMASGT-PVIAYGKGGA--LETVIDGVTGILFEEQTVES 315 (351)
T ss_pred HHHHHHHHhCCEEEECCc-CCCCchHHHHHHcCC-CEEEeCCCCC--cceeeCCCCEEEeCCCCHHH
Confidence 457788999999999865 445667899999998 9998875322 23333334466676666544
No 33
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=91.15 E-value=0.77 Score=45.49 Aligned_cols=91 Identities=14% Similarity=0.187 Sum_probs=57.2
Q ss_pred hhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccc-hHHHHHhcCC
Q 011195 338 HQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGN-FLINLVRNIK 416 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~-~l~~iL~~I~ 416 (491)
++..+.+..|.+.++|......+..++|||++|| |||..+.- ...+.+.-....+.++..+. +.. .+.+++. .
T Consensus 270 ~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~-PvI~~~~~--~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~--~ 343 (374)
T cd03817 270 EELPDYYKAADLFVFASTTETQGLVLLEAMAAGL-PVVAVDAP--GLPDLVADGENGFLFPPGDE-ALAEALLRLLQ--D 343 (374)
T ss_pred HHHHHHHHHcCEEEecccccCcChHHHHHHHcCC-cEEEeCCC--ChhhheecCceeEEeCCCCH-HHHHHHHHHHh--C
Confidence 4577889999999999876666789999999986 56666543 22344444344555655543 211 1333333 3
Q ss_pred HHHHHHHHHHHHHhhhce
Q 011195 417 KDEWTHMRDRLKEVQRFF 434 (491)
Q Consensus 417 ~e~v~~Mr~~l~~v~~~f 434 (491)
++...+|+++.++....+
T Consensus 344 ~~~~~~~~~~~~~~~~~~ 361 (374)
T cd03817 344 PELRRRLSKNAEESAEKF 361 (374)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 455578888777665553
No 34
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=90.58 E-value=0.39 Score=49.24 Aligned_cols=94 Identities=16% Similarity=0.144 Sum_probs=60.7
Q ss_pred hhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccc-hHHHHHhcCCH
Q 011195 339 QASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGN-FLINLVRNIKK 417 (491)
Q Consensus 339 ~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~-~l~~iL~~I~~ 417 (491)
+..+.++.+..++.|.-.......+.|||++|| |||..+--.-| .+.+.-.+-.+.++..|..+.. .|..+|. .+
T Consensus 271 ~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~-PvI~~~~~~g~-~~~v~~~~~G~lv~~~d~~~la~~i~~ll~--~~ 346 (372)
T cd04949 271 DLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGL-PVISYDVNYGP-SEIIEDGENGYLVPKGDIEALAEAIIELLN--DP 346 (372)
T ss_pred CHHHHHhhhhEEEecccccccChHHHHHHhCCC-CEEEecCCCCc-HHHcccCCCceEeCCCcHHHHHHHHHHHHc--CH
Confidence 466778899999998765556788999999998 77776521112 2333334455666666654411 1333443 46
Q ss_pred HHHHHHHHHHHHhhhceEE
Q 011195 418 DEWTHMRDRLKEVQRFFEF 436 (491)
Q Consensus 418 e~v~~Mr~~l~~v~~~f~y 436 (491)
+.+.+|+++..+....|.+
T Consensus 347 ~~~~~~~~~a~~~~~~~s~ 365 (372)
T cd04949 347 KLLQKFSEAAYENAERYSE 365 (372)
T ss_pred HHHHHHHHHHHHHHHHhhH
Confidence 7888998888777666544
No 35
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=90.45 E-value=1.8 Score=45.96 Aligned_cols=122 Identities=16% Similarity=0.235 Sum_probs=68.8
Q ss_pred eEEEEecceecCCCcchHHHHHHHhhcCC--CeEEEeCcccCCChhhhhhcccCccEEEeeC----CCCCCchhHHHHHH
Q 011195 295 ILLYFQGAIYRKDGGSVRQELFYLLKDEK--DVHFSFGSVQKNGIHQASQGMHSSKFCLNIA----GDTPSSNRLFDAIA 368 (491)
Q Consensus 295 ~L~~FaG~~~~~~~~~iR~~L~~~~~~~~--d~~~~~g~~~~~~~~~y~~~m~~S~FCL~P~----Gds~~s~RlfDAi~ 368 (491)
+.+.+.|. |..++.|.++.++.. ++.+..|.. ..+++.+.|..|..++.|. |.+ ....++|||+
T Consensus 270 i~l~ivG~------G~~~~~l~~~~~~~~l~~~~~~~g~~---~~~~~~~~l~~aDv~v~~~~~~~~~~-~p~~~~Eama 339 (415)
T cd03816 270 LLCIITGK------GPLKEKYLERIKELKLKKVTIRTPWL---SAEDYPKLLASADLGVSLHTSSSGLD-LPMKVVDMFG 339 (415)
T ss_pred EEEEEEec------CccHHHHHHHHHHcCCCcEEEEcCcC---CHHHHHHHHHhCCEEEEccccccccC-CcHHHHHHHH
Confidence 66666663 334566665554332 222222222 2356778888888887642 333 3668999999
Q ss_pred hCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccc-hHHHHHhc-CCHHHHHHHHHHHHHhh
Q 011195 369 SHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGN-FLINLVRN-IKKDEWTHMRDRLKEVQ 431 (491)
Q Consensus 369 aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~-~l~~iL~~-I~~e~v~~Mr~~l~~v~ 431 (491)
+|+ |||.++.-.. .+++.-..-.+.++ |..+.. .|.++|.. .++++..+|.++.++..
T Consensus 340 ~G~-PVI~s~~~~~--~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 340 CGL-PVCALDFKCI--DELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred cCC-CEEEeCCCCH--HHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh
Confidence 998 9999875322 23443333344442 433311 13344443 12778888888776654
No 36
>PRK10307 putative glycosyl transferase; Provisional
Probab=90.03 E-value=1.1 Score=47.09 Aligned_cols=94 Identities=11% Similarity=0.123 Sum_probs=60.5
Q ss_pred hhhhhcccCccEEEeeCCCCC----CchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccchHHHHHh
Q 011195 338 HQASQGMHSSKFCLNIAGDTP----SSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINLVR 413 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds~----~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~~l~~iL~ 413 (491)
++..+.++.|..++.|.=.+. ....++|||++| +|||.++.--....+++. .-.+.++..|+.+ +.+.|.
T Consensus 295 ~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G-~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~---la~~i~ 368 (412)
T PRK10307 295 DRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASG-RNVVATAEPGTELGQLVE--GIGVCVEPESVEA---LVAAIA 368 (412)
T ss_pred HHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcC-CCEEEEeCCCchHHHHHh--CCcEEeCCCCHHH---HHHHHH
Confidence 457788899999888753322 234589999999 688888642222334555 3466677777655 544444
Q ss_pred cC--CHHHHHHHHHHHHH-hhhceEEc
Q 011195 414 NI--KKDEWTHMRDRLKE-VQRFFEFQ 437 (491)
Q Consensus 414 ~I--~~e~v~~Mr~~l~~-v~~~f~y~ 437 (491)
.+ .++...+|+++.++ +..+|.|.
T Consensus 369 ~l~~~~~~~~~~~~~a~~~~~~~fs~~ 395 (412)
T PRK10307 369 ALARQALLRPKLGTVAREYAERTLDKE 395 (412)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHcCHH
Confidence 33 46677888888776 44566654
No 37
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=89.77 E-value=2.2 Score=44.00 Aligned_cols=94 Identities=16% Similarity=0.122 Sum_probs=59.3
Q ss_pred hhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccchHHHHHhcCCH
Q 011195 338 HQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINLVRNIKK 417 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~~l~~iL~~I~~ 417 (491)
.+....++.+..++.|.........+.|||++| +|||.++.-.++ +.+.-....+.++..|... ..+.+.|. .+
T Consensus 265 ~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G-~Pvv~s~~~~~~--~~i~~~~~g~~~~~~~~~a-~~i~~ll~--~~ 338 (372)
T cd03792 265 LEVNALQRASTVVLQKSIREGFGLTVTEALWKG-KPVIAGPVGGIP--LQIEDGETGFLVDTVEEAA-VRILYLLR--DP 338 (372)
T ss_pred HHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcC-CCEEEcCCCCch--hhcccCCceEEeCCcHHHH-HHHHHHHc--CH
Confidence 456678889999999887666788999999999 599998754333 3333333334444222111 11344443 46
Q ss_pred HHHHHHHHHHHHh-hhceEEc
Q 011195 418 DEWTHMRDRLKEV-QRFFEFQ 437 (491)
Q Consensus 418 e~v~~Mr~~l~~v-~~~f~y~ 437 (491)
+...+|.++..+. ...|.|.
T Consensus 339 ~~~~~~~~~a~~~~~~~~s~~ 359 (372)
T cd03792 339 ELRRKMGANAREHVRENFLIT 359 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCHH
Confidence 7778888887764 4566554
No 38
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=89.63 E-value=1.2 Score=46.02 Aligned_cols=64 Identities=17% Similarity=0.123 Sum_probs=43.3
Q ss_pred hhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccc
Q 011195 339 QASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVK 404 (491)
Q Consensus 339 ~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~ 404 (491)
.+.+.++.+..++.|.........++|||++| +|||.++...-+ .+++.-..-.+.++..|+.+
T Consensus 250 ~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G-~Pvv~s~~~~g~-~eiv~~~~~G~lv~~~d~~~ 313 (359)
T PRK09922 250 VVQQKIKNVSALLLTSKFEGFPMTLLEAMSYG-IPCISSDCMSGP-RDIIKPGLNGELYTPGNIDE 313 (359)
T ss_pred HHHHHHhcCcEEEECCcccCcChHHHHHHHcC-CCEEEeCCCCCh-HHHccCCCceEEECCCCHHH
Confidence 45566778888888887766789999999999 688888722222 23443344455566667655
No 39
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=89.44 E-value=1.8 Score=46.64 Aligned_cols=95 Identities=15% Similarity=0.135 Sum_probs=56.9
Q ss_pred hhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCC-----cEEEEEecccccccc-hHHHHH
Q 011195 339 QASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYS-----EFCIFVRTSDAVKGN-FLINLV 412 (491)
Q Consensus 339 ~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~-----~fSV~I~e~dv~~~~-~l~~iL 412 (491)
...+.++.+.+++.|.-..+......|||++||.||. ++.--++ +-+.|.+ ...+.+++.|..+.. .|.++|
T Consensus 358 ~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~-s~~gg~~-e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l 435 (473)
T TIGR02095 358 LAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIV-RRTGGLA-DTVVDGDPEAESGTGFLFEEYDPGALLAALSRAL 435 (473)
T ss_pred HHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEE-ccCCCcc-ceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHH
Confidence 3557789999999999888888899999999996664 5432222 1222321 445666666654411 123333
Q ss_pred hcC--CHHHHHHHHHHHHHhhhceEEc
Q 011195 413 RNI--KKDEWTHMRDRLKEVQRFFEFQ 437 (491)
Q Consensus 413 ~~I--~~e~v~~Mr~~l~~v~~~f~y~ 437 (491)
... .++.+.+|.++.. ...|.|.
T Consensus 436 ~~~~~~~~~~~~~~~~~~--~~~fsw~ 460 (473)
T TIGR02095 436 RLYRQDPSLWEALQKNAM--SQDFSWD 460 (473)
T ss_pred HHHhcCHHHHHHHHHHHh--ccCCCcH
Confidence 321 4566777776543 3445544
No 40
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=89.31 E-value=2.4 Score=42.64 Aligned_cols=90 Identities=17% Similarity=0.284 Sum_probs=52.7
Q ss_pred hhhhhcccCccEEEeeCCC-CCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEeccc-ccccchHHHHHhcC
Q 011195 338 HQASQGMHSSKFCLNIAGD-TPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSD-AVKGNFLINLVRNI 415 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gd-s~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~d-v~~~~~l~~iL~~I 415 (491)
++..+.+..+..++.|.-. ......++|||++|| |||.++.- +..+++.-. ...++..+ +.+ .++.|..
T Consensus 259 ~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~-PvI~s~~~--~~~e~~~~~--g~~~~~~~~l~~---~i~~l~~- 329 (363)
T cd04955 259 QELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGC-PVLASDNP--FNREVLGDK--AIYFKVGDDLAS---LLEELEA- 329 (363)
T ss_pred HHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCC-CEEEecCC--ccceeecCC--eeEecCchHHHH---HHHHHHh-
Confidence 3466778888888887655 556778999999999 77777643 223444432 23334444 322 2332322
Q ss_pred CHHHHHHHHHHHHHhh-hceEE
Q 011195 416 KKDEWTHMRDRLKEVQ-RFFEF 436 (491)
Q Consensus 416 ~~e~v~~Mr~~l~~v~-~~f~y 436 (491)
.++.+.+|.++..+.. .+|.|
T Consensus 330 ~~~~~~~~~~~~~~~~~~~fs~ 351 (363)
T cd04955 330 DPEEVSAMAKAARERIREKYTW 351 (363)
T ss_pred CHHHHHHHHHHHHHHHHHhCCH
Confidence 2366777777666533 33544
No 41
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=89.25 E-value=0.71 Score=37.98 Aligned_cols=81 Identities=17% Similarity=0.256 Sum_probs=45.6
Q ss_pred EEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEe-cccccccchHHHHHhcCCHHHHHHHHHHHH
Q 011195 350 CLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVR-TSDAVKGNFLINLVRNIKKDEWTHMRDRLK 428 (491)
Q Consensus 350 CL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~-e~dv~~~~~l~~iL~~I~~e~v~~Mr~~l~ 428 (491)
||.|.-.+..+.|+||+|++||..|. .+.- .+.+.++..+-.+.++ .+++.+ .++.|.+ .+++.++|.++..
T Consensus 2 ~Ln~~~~~~~~~r~~E~~a~G~~vi~-~~~~--~~~~~~~~~~~~~~~~~~~el~~---~i~~ll~-~~~~~~~ia~~a~ 74 (92)
T PF13524_consen 2 NLNPSRSDGPNMRIFEAMACGTPVIS-DDSP--GLREIFEDGEHIITYNDPEELAE---KIEYLLE-NPEERRRIAKNAR 74 (92)
T ss_pred EeeCCCCCCCchHHHHHHHCCCeEEE-CChH--HHHHHcCCCCeEEEECCHHHHHH---HHHHHHC-CHHHHHHHHHHHH
Confidence 44443333357899999999986544 4332 1222345554455554 333333 3444444 7788888888776
Q ss_pred H-hhhceEEc
Q 011195 429 E-VQRFFEFQ 437 (491)
Q Consensus 429 ~-v~~~f~y~ 437 (491)
+ +..++.|.
T Consensus 75 ~~v~~~~t~~ 84 (92)
T PF13524_consen 75 ERVLKRHTWE 84 (92)
T ss_pred HHHHHhCCHH
Confidence 5 43355443
No 42
>PLN02949 transferase, transferring glycosyl groups
Probab=89.04 E-value=3.3 Score=45.12 Aligned_cols=96 Identities=14% Similarity=0.129 Sum_probs=56.1
Q ss_pred hhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCC-CC-cEEEEEecccccccc-hHHHHHhc
Q 011195 338 HQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILD-YS-EFCIFVRTSDAVKGN-FLINLVRN 414 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iD-w~-~fSV~I~e~dv~~~~-~l~~iL~~ 414 (491)
++..+.++++.+++.|.-+.....-+.|||++||+||.-... =|-++++. .. .-.-++. .++.+-. .|.++++
T Consensus 346 ~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~g--Gp~~eIV~~~~~g~tG~l~-~~~~~la~ai~~ll~- 421 (463)
T PLN02949 346 RDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSA--GPKMDIVLDEDGQQTGFLA-TTVEEYADAILEVLR- 421 (463)
T ss_pred HHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCC--CCcceeeecCCCCcccccC-CCHHHHHHHHHHHHh-
Confidence 356677888999888876666788999999999877775432 13333322 11 0111111 2333211 1333333
Q ss_pred CCHHHHHHHHHHHHHhhhceEEc
Q 011195 415 IKKDEWTHMRDRLKEVQRFFEFQ 437 (491)
Q Consensus 415 I~~e~v~~Mr~~l~~v~~~f~y~ 437 (491)
.++++..+|+++.++....|.+.
T Consensus 422 ~~~~~r~~m~~~ar~~~~~FS~e 444 (463)
T PLN02949 422 MRETERLEIAAAARKRANRFSEQ 444 (463)
T ss_pred CCHHHHHHHHHHHHHHHHHcCHH
Confidence 26677788988887666665543
No 43
>PRK00654 glgA glycogen synthase; Provisional
Probab=87.89 E-value=3 Score=45.09 Aligned_cols=83 Identities=14% Similarity=0.245 Sum_probs=52.0
Q ss_pred hhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCC-----cEEEEEecccccccchHHHHHhc
Q 011195 340 ASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYS-----EFCIFVRTSDAVKGNFLINLVRN 414 (491)
Q Consensus 340 y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~-----~fSV~I~e~dv~~~~~l~~iL~~ 414 (491)
....++.|.+++.|.=..+......|||++||+||+-.-+ -++ +-+.|.. .-.+.++..|... +.+.|..
T Consensus 350 ~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~g-G~~-e~v~~~~~~~~~~~G~lv~~~d~~~---la~~i~~ 424 (466)
T PRK00654 350 AHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTG-GLA-DTVIDYNPEDGEATGFVFDDFNAED---LLRALRR 424 (466)
T ss_pred HHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCC-Ccc-ceeecCCCCCCCCceEEeCCCCHHH---HHHHHHH
Confidence 4567899999999988888888999999999988774322 111 1122321 3456677666554 4333332
Q ss_pred C-----CHHHHHHHHHHH
Q 011195 415 I-----KKDEWTHMRDRL 427 (491)
Q Consensus 415 I-----~~e~v~~Mr~~l 427 (491)
+ .++.+.+|.++.
T Consensus 425 ~l~~~~~~~~~~~~~~~~ 442 (466)
T PRK00654 425 ALELYRQPPLWRALQRQA 442 (466)
T ss_pred HHHHhcCHHHHHHHHHHH
Confidence 1 345566666554
No 44
>PRK14099 glycogen synthase; Provisional
Probab=87.75 E-value=3.6 Score=45.00 Aligned_cols=92 Identities=13% Similarity=0.135 Sum_probs=57.3
Q ss_pred hhhhcc-cCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCC--------cEEEEEecccccccchHH
Q 011195 339 QASQGM-HSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYS--------EFCIFVRTSDAVKGNFLI 409 (491)
Q Consensus 339 ~y~~~m-~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~--------~fSV~I~e~dv~~~~~l~ 409 (491)
+....+ +.|.+.+.|.=..+......|||++||+||+ ++---++ +-+.|.. .-.+.++..|... +.
T Consensus 361 ~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVv-s~~GGl~-d~V~~~~~~~~~~~~~~G~l~~~~d~~~---La 435 (485)
T PRK14099 361 ALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVV-ARVGGLA-DTVVDANEMAIATGVATGVQFSPVTADA---LA 435 (485)
T ss_pred HHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEE-eCCCCcc-ceeecccccccccCCCceEEeCCCCHHH---HH
Confidence 344555 4688888898888889999999999999988 5421121 2223442 2456677776554 44
Q ss_pred HHHhc----C-CHHHHHHHHHHHHHhhhceEEc
Q 011195 410 NLVRN----I-KKDEWTHMRDRLKEVQRFFEFQ 437 (491)
Q Consensus 410 ~iL~~----I-~~e~v~~Mr~~l~~v~~~f~y~ 437 (491)
+.|.. + .++.+.+|+++.. ...|.|.
T Consensus 436 ~ai~~a~~l~~d~~~~~~l~~~~~--~~~fSw~ 466 (485)
T PRK14099 436 AALRKTAALFADPVAWRRLQRNGM--TTDVSWR 466 (485)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHhh--hhcCChH
Confidence 33332 2 4667777877653 3455554
No 45
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=87.73 E-value=1.1 Score=44.54 Aligned_cols=41 Identities=17% Similarity=0.139 Sum_probs=33.2
Q ss_pred hhhhcccCccEEEeeCC-CCCCchhHHHHHHhCceeEEeeCCc
Q 011195 339 QASQGMHSSKFCLNIAG-DTPSSNRLFDAIASHCVPVIISDEI 380 (491)
Q Consensus 339 ~y~~~m~~S~FCL~P~G-ds~~s~RlfDAi~aGCIPVIisd~~ 380 (491)
+..+.++.+.+++.|.- .......++|||++|+ |||.+|.-
T Consensus 236 ~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~-PvI~~~~~ 277 (335)
T cd03802 236 EKAELLGNARALLFPILWEEPFGLVMIEAMACGT-PVIAFRRG 277 (335)
T ss_pred HHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCC-CEEEeCCC
Confidence 45678899999999975 3445778999999997 99998864
No 46
>PRK14098 glycogen synthase; Provisional
Probab=87.07 E-value=3.6 Score=45.08 Aligned_cols=92 Identities=11% Similarity=0.108 Sum_probs=56.2
Q ss_pred hhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCC---CcEEEEEecccccccchHHHHHhc-
Q 011195 339 QASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDY---SEFCIFVRTSDAVKGNFLINLVRN- 414 (491)
Q Consensus 339 ~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw---~~fSV~I~e~dv~~~~~l~~iL~~- 414 (491)
...+.++.|.+++.|.=..+......|||++||+||+...+- ++ +-+.|+ ..-.+.++..|... +.+.|..
T Consensus 374 ~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GG-l~-d~v~~~~~~~~~G~l~~~~d~~~---la~ai~~~ 448 (489)
T PRK14098 374 FFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGG-IV-ETIEEVSEDKGSGFIFHDYTPEA---LVAKLGEA 448 (489)
T ss_pred HHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCC-Cc-eeeecCCCCCCceeEeCCCCHHH---HHHHHHHH
Confidence 356788999999999888888889999999999999865321 11 111121 23345566666544 4333322
Q ss_pred ---C-CHHHHHHHHHHHHHhhhceEEc
Q 011195 415 ---I-KKDEWTHMRDRLKEVQRFFEFQ 437 (491)
Q Consensus 415 ---I-~~e~v~~Mr~~l~~v~~~f~y~ 437 (491)
. .++++.+|+++. +...|.|.
T Consensus 449 l~~~~~~~~~~~~~~~~--~~~~fsw~ 473 (489)
T PRK14098 449 LALYHDEERWEELVLEA--MERDFSWK 473 (489)
T ss_pred HHHHcCHHHHHHHHHHH--hcCCCChH
Confidence 1 356666666543 23445544
No 47
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=86.49 E-value=1.7 Score=42.33 Aligned_cols=92 Identities=14% Similarity=0.085 Sum_probs=54.7
Q ss_pred hhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccchHHHHHhc-C-C
Q 011195 339 QASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINLVRN-I-K 416 (491)
Q Consensus 339 ~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~~l~~iL~~-I-~ 416 (491)
+..+.+..+.++++|.-....+..+.|||++||. ||.++.- ...+++.=....+.++..+......+.+.+.. . .
T Consensus 256 ~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~P-vI~~~~~--~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 332 (353)
T cd03811 256 NPYPYLKAADLFVLSSRYEGFPNVLLEAMALGTP-VVATDCP--GPREILEDGENGLLVPVGDEAALAAAALALLDLLLD 332 (353)
T ss_pred CHHHHHHhCCEEEeCcccCCCCcHHHHHHHhCCC-EEEcCCC--ChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCC
Confidence 4567889999999998666567889999999975 5555543 22344444455666776665441111332222 2 2
Q ss_pred HHHHHHHHH-HHHHhhhc
Q 011195 417 KDEWTHMRD-RLKEVQRF 433 (491)
Q Consensus 417 ~e~v~~Mr~-~l~~v~~~ 433 (491)
++...+|.+ +...+..+
T Consensus 333 ~~~~~~~~~~~~~~~~~~ 350 (353)
T cd03811 333 PELRERLAAAARERVARE 350 (353)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 445566666 33334433
No 48
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=86.45 E-value=0.99 Score=46.46 Aligned_cols=93 Identities=16% Similarity=0.148 Sum_probs=56.4
Q ss_pred hhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccc-hHHHHHhcCCH
Q 011195 339 QASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGN-FLINLVRNIKK 417 (491)
Q Consensus 339 ~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~-~l~~iL~~I~~ 417 (491)
+..+.+..|.+++.|.........+.|||++| +|||.++.-- +-+-+.+.. -.+.++. |..+.. .+.+++. .+
T Consensus 292 ~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G-~PvI~s~~~~-~~e~i~~~~-~g~~~~~-~~~~~a~~i~~l~~--~~ 365 (392)
T cd03805 292 QKELLLSSARALLYTPSNEHFGIVPLEAMYAG-KPVIACNSGG-PLETVVDGE-TGFLCEP-TPEEFAEAMLKLAN--DP 365 (392)
T ss_pred HHHHHHhhCeEEEECCCcCCCCchHHHHHHcC-CCEEEECCCC-cHHHhccCC-ceEEeCC-CHHHHHHHHHHHHh--Ch
Confidence 45677899999999887766677899999999 6777776422 222233433 3444543 433311 1333333 34
Q ss_pred HHHHHHHHHHHH-hhhceEEc
Q 011195 418 DEWTHMRDRLKE-VQRFFEFQ 437 (491)
Q Consensus 418 e~v~~Mr~~l~~-v~~~f~y~ 437 (491)
+...+|+++.++ +...|.|.
T Consensus 366 ~~~~~~~~~a~~~~~~~~s~~ 386 (392)
T cd03805 366 DLADRMGAAGRKRVKEKFSTE 386 (392)
T ss_pred HHHHHHHHHHHHHHHHhcCHH
Confidence 567888777665 44555543
No 49
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=85.83 E-value=0.59 Score=40.66 Aligned_cols=62 Identities=21% Similarity=0.254 Sum_probs=35.1
Q ss_pred hhhhhcccCccEEEeeCC-CCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccc
Q 011195 338 HQASQGMHSSKFCLNIAG-DTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVK 404 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~G-ds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~ 404 (491)
+++.+.++++..+++|.- +...+..++|++++||- ||.++. ++++.+.-..-.+.+ ..+..+
T Consensus 62 ~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~p-vi~~~~---~~~~~~~~~~~~~~~-~~~~~~ 124 (135)
T PF13692_consen 62 EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKP-VIASDN---GAEGIVEEDGCGVLV-ANDPEE 124 (135)
T ss_dssp HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT---EEEEHH---HCHCHS---SEEEE--TT-HHH
T ss_pred HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCC-EEECCc---chhhheeecCCeEEE-CCCHHH
Confidence 368899999999999974 23467899999999974 555554 344433334455555 444433
No 50
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=85.32 E-value=1.8 Score=45.32 Aligned_cols=91 Identities=15% Similarity=0.216 Sum_probs=54.8
Q ss_pred hhhhcccCccEEEeeC--CCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccc-hHHHHHhcC
Q 011195 339 QASQGMHSSKFCLNIA--GDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGN-FLINLVRNI 415 (491)
Q Consensus 339 ~y~~~m~~S~FCL~P~--Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~-~l~~iL~~I 415 (491)
+....++.+..++.|. |.+ ....+.|||++|| |||.++.- .+.+..-..-.+.++ .+..+.. .|.++|.
T Consensus 290 ~~~~~~~~adv~v~Ps~~~eG-~~~~~lEAma~G~-PVV~t~~~---~~~i~~~~~~g~lv~-~~~~~la~ai~~ll~-- 361 (397)
T TIGR03087 290 DVRPYLAHAAVAVAPLRIARG-IQNKVLEAMAMAK-PVVASPEA---AEGIDALPGAELLVA-ADPADFAAAILALLA-- 361 (397)
T ss_pred CHHHHHHhCCEEEecccccCC-cccHHHHHHHcCC-CEEecCcc---cccccccCCcceEeC-CCHHHHHHHHHHHHc--
Confidence 4566788899998885 444 3567999999998 99988742 122211122344555 4544311 1333333
Q ss_pred CHHHHHHHHHHHHH-hhhceEEc
Q 011195 416 KKDEWTHMRDRLKE-VQRFFEFQ 437 (491)
Q Consensus 416 ~~e~v~~Mr~~l~~-v~~~f~y~ 437 (491)
.++...+|.++.++ +..+|.|.
T Consensus 362 ~~~~~~~~~~~ar~~v~~~fsw~ 384 (397)
T TIGR03087 362 NPAEREELGQAARRRVLQHYHWP 384 (397)
T ss_pred CHHHHHHHHHHHHHHHHHhCCHH
Confidence 46667888887765 44566664
No 51
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=84.45 E-value=1.4 Score=47.06 Aligned_cols=85 Identities=20% Similarity=0.257 Sum_probs=52.9
Q ss_pred cEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccc-hHHHHHhcCCHHHHHHHHHH
Q 011195 348 KFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGN-FLINLVRNIKKDEWTHMRDR 426 (491)
Q Consensus 348 ~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~-~l~~iL~~I~~e~v~~Mr~~ 426 (491)
..++.|.-......-+.|||++|| |||.++.-- ..++++-..-.+.++..|..... .|.++|. .+++..+|.++
T Consensus 342 Dv~v~pS~~E~fg~~~lEAma~G~-PvV~s~~gg--~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~--~~~~~~~~~~~ 416 (439)
T TIGR02472 342 GIFVNPALTEPFGLTLLEAAACGL-PIVATDDGG--PRDIIANCRNGLLVDVLDLEAIASALEDALS--DSSQWQLWSRN 416 (439)
T ss_pred CEEecccccCCcccHHHHHHHhCC-CEEEeCCCC--cHHHhcCCCcEEEeCCCCHHHHHHHHHHHHh--CHHHHHHHHHH
Confidence 445556545555778999999999 999998532 33455444556677777765421 1333333 45666777776
Q ss_pred HHH-hhhceEEc
Q 011195 427 LKE-VQRFFEFQ 437 (491)
Q Consensus 427 l~~-v~~~f~y~ 437 (491)
.++ +..+|.|.
T Consensus 417 a~~~~~~~fsw~ 428 (439)
T TIGR02472 417 GIEGVRRHYSWD 428 (439)
T ss_pred HHHHHHHhCCHH
Confidence 654 55666654
No 52
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=84.33 E-value=2.3 Score=42.51 Aligned_cols=95 Identities=12% Similarity=0.028 Sum_probs=57.6
Q ss_pred hhhhhcccCccEEEeeCC--CCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccc-hHHHHHhc
Q 011195 338 HQASQGMHSSKFCLNIAG--DTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGN-FLINLVRN 414 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~G--ds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~-~l~~iL~~ 414 (491)
.++.+.++.+..+++|.- .......+.|||.+| +|||.++.-..+ +.+.+.......++..|..+.. .|.+++.
T Consensus 255 ~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g-~Pvi~~~~~~~~-~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~- 331 (357)
T cd03795 255 EEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFG-KPVISTEIGTGG-SYVNLHGVTGLVVPPGDPAALAEAIRRLLE- 331 (357)
T ss_pred HHHHHHHHhCCEEEeCCcccccccchHHHHHHHcC-CCEEecCCCCch-hHHhhCCCceEEeCCCCHHHHHHHHHHHHH-
Confidence 356788888999998852 233466799999997 577777643222 1122224555666666655411 1233333
Q ss_pred CCHHHHHHHHHHHHHh-hhceEE
Q 011195 415 IKKDEWTHMRDRLKEV-QRFFEF 436 (491)
Q Consensus 415 I~~e~v~~Mr~~l~~v-~~~f~y 436 (491)
.+++..+|.++..+. .++|.+
T Consensus 332 -~~~~~~~~~~~~~~~~~~~~s~ 353 (357)
T cd03795 332 -DPELRERLGEAARERAEEEFTA 353 (357)
T ss_pred -CHHHHHHHHHHHHHHHHHhcch
Confidence 577888898888764 344544
No 53
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=82.89 E-value=3.1 Score=41.59 Aligned_cols=94 Identities=12% Similarity=0.165 Sum_probs=58.0
Q ss_pred hhhhhcccCccEEEeeCCC------CCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccchHHHH
Q 011195 338 HQASQGMHSSKFCLNIAGD------TPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINL 411 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gd------s~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~~l~~i 411 (491)
.+..+.++++.+++.|... ......++|||++||-.| .++.- ...+++.=..-...+++.+..+ +.+.
T Consensus 247 ~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi-~~~~~--~~~~~i~~~~~g~~~~~~~~~~---l~~~ 320 (355)
T cd03799 247 EEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVI-STDVS--GIPELVEDGETGLLVPPGDPEA---LADA 320 (355)
T ss_pred HHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEE-ecCCC--CcchhhhCCCceEEeCCCCHHH---HHHH
Confidence 4677888999999998654 445788999999998555 45432 2234444333455566656544 3333
Q ss_pred HhcC--CHHHHHHHHHHHHH-hhhceEEc
Q 011195 412 VRNI--KKDEWTHMRDRLKE-VQRFFEFQ 437 (491)
Q Consensus 412 L~~I--~~e~v~~Mr~~l~~-v~~~f~y~ 437 (491)
|..+ .++++.+|.++..+ +..+|.|.
T Consensus 321 i~~~~~~~~~~~~~~~~a~~~~~~~~s~~ 349 (355)
T cd03799 321 IERLLDDPELRREMGEAGRARVEEEFDIR 349 (355)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHhcCHH
Confidence 3322 45667788877764 33445443
No 54
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=82.44 E-value=4.3 Score=40.74 Aligned_cols=89 Identities=16% Similarity=0.114 Sum_probs=57.9
Q ss_pred hhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccc-hHHHHHhcCC
Q 011195 338 HQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGN-FLINLVRNIK 416 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~-~l~~iL~~I~ 416 (491)
.++.+.|+.|.+.+.|......+..+.|||++|| |||.++.- +..+.+.-..-.+.++..+..+.. .+.+++. .
T Consensus 256 ~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~-PvI~~~~~--~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~--~ 330 (365)
T cd03825 256 ESLALIYSAADVFVVPSLQENFPNTAIEALACGT-PVVAFDVG--GIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLA--D 330 (365)
T ss_pred HHHHHHHHhCCEEEeccccccccHHHHHHHhcCC-CEEEecCC--CChhheeCCCceEEeCCCCHHHHHHHHHHHHh--C
Confidence 3466789999999999887777899999999997 56666532 333444434455666665554411 1333333 4
Q ss_pred HHHHHHHHHHHHHhh
Q 011195 417 KDEWTHMRDRLKEVQ 431 (491)
Q Consensus 417 ~e~v~~Mr~~l~~v~ 431 (491)
+++..+|.++..+..
T Consensus 331 ~~~~~~~~~~~~~~~ 345 (365)
T cd03825 331 PDEREELGEAARELA 345 (365)
T ss_pred HHHHHHHHHHHHHHH
Confidence 566788888776543
No 55
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=82.31 E-value=4.1 Score=44.14 Aligned_cols=87 Identities=10% Similarity=0.115 Sum_probs=55.3
Q ss_pred hhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCC------CcEEEEEecccccccch-HHH
Q 011195 338 HQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDY------SEFCIFVRTSDAVKGNF-LIN 410 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw------~~fSV~I~e~dv~~~~~-l~~ 410 (491)
.+..+.|..+..++.|.-.......++|||++|| |||.+|.-- ..++++- ....+.++..|..+... +.+
T Consensus 362 ~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~-PVVatd~g~--~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ 438 (475)
T cd03813 362 QNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGI-PVVATDVGS--CRELIEGADDEALGPAGEVVPPADPEALARAILR 438 (475)
T ss_pred ccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCC-CEEECCCCC--hHHHhcCCcccccCCceEEECCCCHHHHHHHHHH
Confidence 3456778888888888644445678999999998 888876421 1222222 23566677777655221 333
Q ss_pred HHhcCCHHHHHHHHHHHHH
Q 011195 411 LVRNIKKDEWTHMRDRLKE 429 (491)
Q Consensus 411 iL~~I~~e~v~~Mr~~l~~ 429 (491)
+|. .++...+|.++.++
T Consensus 439 ll~--~~~~~~~~~~~a~~ 455 (475)
T cd03813 439 LLK--DPELRRAMGEAGRK 455 (475)
T ss_pred Hhc--CHHHHHHHHHHHHH
Confidence 333 57777888877765
No 56
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=82.15 E-value=5.9 Score=39.77 Aligned_cols=41 Identities=20% Similarity=0.075 Sum_probs=33.2
Q ss_pred hhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCC
Q 011195 338 HQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDE 379 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~ 379 (491)
++..+.+..+.++++|.-.......+.|||++||- ||.++.
T Consensus 258 ~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~P-vI~s~~ 298 (358)
T cd03812 258 NDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGLP-CILSDT 298 (358)
T ss_pred CCHHHHHHhcCEEEecccccCCCHHHHHHHHhCCC-EEEEcC
Confidence 35677889999999998777778999999999985 555653
No 57
>PHA01630 putative group 1 glycosyl transferase
Probab=82.08 E-value=2.4 Score=43.93 Aligned_cols=41 Identities=7% Similarity=0.069 Sum_probs=32.3
Q ss_pred hhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCC
Q 011195 338 HQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDE 379 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~ 379 (491)
++..+.++.+..++.|.-......-+.|||++|| |||.++.
T Consensus 201 ~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~-PVIas~~ 241 (331)
T PHA01630 201 DDIYSLFAGCDILFYPVRGGAFEIPVIEALALGL-DVVVTEK 241 (331)
T ss_pred HHHHHHHHhCCEEEECCccccCChHHHHHHHcCC-CEEEeCC
Confidence 4567788999999998766656778999999997 6666664
No 58
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=81.31 E-value=7.9 Score=43.35 Aligned_cols=63 Identities=11% Similarity=0.045 Sum_probs=44.4
Q ss_pred hhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccc
Q 011195 339 QASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVK 404 (491)
Q Consensus 339 ~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~ 404 (491)
+..+.|..+..++.|.=.......+.|||++|| |||.++.--.| +.+.-..-.+.++..|...
T Consensus 465 Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~Gl-PVVATdvGG~~--EiV~dG~nG~LVp~~D~~a 527 (578)
T PRK15490 465 DVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGV-PVISTPAGGSA--ECFIEGVSGFILDDAQTVN 527 (578)
T ss_pred hHHHHHHhCCEEEEcccccCccHHHHHHHHhCC-CEEEeCCCCcH--HHcccCCcEEEECCCChhh
Confidence 456678888888888766767899999999998 99988753222 3343344556677766533
No 59
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=80.97 E-value=8.3 Score=41.24 Aligned_cols=87 Identities=15% Similarity=0.169 Sum_probs=52.2
Q ss_pred hhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCC-----cEEEEEecccccccc-hHHHHHh
Q 011195 340 ASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYS-----EFCIFVRTSDAVKGN-FLINLVR 413 (491)
Q Consensus 340 y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~-----~fSV~I~e~dv~~~~-~l~~iL~ 413 (491)
..+.++.+.+.+.|.-..+......|||++||.||.-..+ -++ +-+.|.. .-.+.++..+..... .+.++|.
T Consensus 364 ~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~g-g~~-e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~ 441 (476)
T cd03791 364 AHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATG-GLA-DTVIDYNEDTGEGTGFVFEGYNADALLAALRRALA 441 (476)
T ss_pred HHHHHHhCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCC-Ccc-ceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHH
Confidence 4567888999999988888888999999999988764322 111 2223332 135556666654411 1223332
Q ss_pred cC-CHHHHHHHHHHHH
Q 011195 414 NI-KKDEWTHMRDRLK 428 (491)
Q Consensus 414 ~I-~~e~v~~Mr~~l~ 428 (491)
.. .++++.+|.++..
T Consensus 442 ~~~~~~~~~~~~~~~~ 457 (476)
T cd03791 442 LYRDPEAWRKLQRNAM 457 (476)
T ss_pred HHcCHHHHHHHHHHHh
Confidence 21 2566777776653
No 60
>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=80.14 E-value=12 Score=39.81 Aligned_cols=123 Identities=13% Similarity=0.258 Sum_probs=76.5
Q ss_pred CCCCeEEEEecceecCCCcchHHHHHHHhhcCCCeEEEeCccc-----CCChhhhhhcccCccEEEeeCC---CCCCchh
Q 011195 291 DSRPILLYFQGAIYRKDGGSVRQELFYLLKDEKDVHFSFGSVQ-----KNGIHQASQGMHSSKFCLNIAG---DTPSSNR 362 (491)
Q Consensus 291 ~~R~~L~~FaG~~~~~~~~~iR~~L~~~~~~~~d~~~~~g~~~-----~~~~~~y~~~m~~S~FCL~P~G---ds~~s~R 362 (491)
.+++.++.+..... ...-|.++++.+...-.+. ..|++. +.......+.+..-||-|.-.. ..+-+.-
T Consensus 194 ~k~~~~aw~vSnc~---~~~~R~~~~~~L~k~l~iD-~YG~c~~~~~~~~~~~~~~~~~s~YKFyLAfENS~c~DYVTEK 269 (372)
T KOG2619|consen 194 AKTKLAAWLVSNCI---PRSARLDYYKELMKHLEID-SYGECLRKNANRDPSDCLLETLSHYKFYLAFENSNCEDYVTEK 269 (372)
T ss_pred cccceeeeeccccC---cchHHHHHHHHHHhhCcee-eccccccccccCCCCCcceeecccceEEEEecccCCcccccHH
Confidence 35556666665542 3456777776665432111 133332 1223356788889999998543 3456889
Q ss_pred HHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccchHHHHHhcCCHHHHHHH
Q 011195 363 LFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINLVRNIKKDEWTHM 423 (491)
Q Consensus 363 lfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~~l~~iL~~I~~e~v~~M 423 (491)
|+-|+.+|.|||+++......| ++ .+. +|..+|.....+|...|+.+..++.+-|
T Consensus 270 fw~al~~gsVPVvlg~~n~e~f---vP-~~S--fI~vdDF~s~~ela~ylk~L~~n~~~Y~ 324 (372)
T KOG2619|consen 270 FWNALDAGSVPVVLGPPNYENF---VP-PDS--FIHVDDFQSPQELAAYLKKLDKNPAAYL 324 (372)
T ss_pred HHhhhhcCcccEEECCcccccc---CC-Ccc--eEehhhcCCHHHHHHHHHHhhcCHHHHH
Confidence 9999999999999998544333 33 222 3555777765568888888865554433
No 61
>PHA01633 putative glycosyl transferase group 1
Probab=79.72 E-value=2.5 Score=44.15 Aligned_cols=41 Identities=15% Similarity=0.080 Sum_probs=35.1
Q ss_pred hhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCC
Q 011195 338 HQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDE 379 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~ 379 (491)
++..+.++.|.+.+.|.-......-+.|||++|| |||.++-
T Consensus 215 ~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~-PVVas~~ 255 (335)
T PHA01633 215 EYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGT-PVIHQLM 255 (335)
T ss_pred HHHHHHHHhCCEEEECCccccCCHHHHHHHHcCC-CEEEccC
Confidence 4567888999999999877778889999999999 9998865
No 62
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=79.68 E-value=16 Score=38.74 Aligned_cols=92 Identities=15% Similarity=0.248 Sum_probs=52.3
Q ss_pred hhhhcccC--ccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecc-cccccc-hHHHHHhc
Q 011195 339 QASQGMHS--SKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTS-DAVKGN-FLINLVRN 414 (491)
Q Consensus 339 ~y~~~m~~--S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~-dv~~~~-~l~~iL~~ 414 (491)
+..+.++. +...+.|.-.......+.|||++|+ |||.++---.| ++++=..-.+.++.. ++.+.. .|.+++.
T Consensus 301 e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~-PVIas~vgg~~--e~i~~~~~G~l~~~~~~~~~la~~I~~ll~- 376 (407)
T cd04946 301 EVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGI-PVIATNVGGTP--EIVDNGGNGLLLSKDPTPNELVSSLSKFID- 376 (407)
T ss_pred HHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCC-CEEeCCCCCcH--HHhcCCCcEEEeCCCCCHHHHHHHHHHHHh-
Confidence 34455554 3333345444445778999999995 99988743332 344444334555543 443311 1334443
Q ss_pred CCHHHHHHHHHHHHHhh-hceE
Q 011195 415 IKKDEWTHMRDRLKEVQ-RFFE 435 (491)
Q Consensus 415 I~~e~v~~Mr~~l~~v~-~~f~ 435 (491)
.+++..+|+++.++.. .+|-
T Consensus 377 -~~~~~~~m~~~ar~~~~~~f~ 397 (407)
T cd04946 377 -NEEEYQTMREKAREKWEENFN 397 (407)
T ss_pred -CHHHHHHHHHHHHHHHHHHcC
Confidence 6788899988877643 4443
No 63
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=79.42 E-value=1.9 Score=48.26 Aligned_cols=110 Identities=10% Similarity=0.152 Sum_probs=68.9
Q ss_pred hhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccC---CCCCCCCCcEEEEEeccc-------ccccc-h
Q 011195 339 QASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELP---YEDILDYSEFCIFVRTSD-------AVKGN-F 407 (491)
Q Consensus 339 ~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LP---F~d~iDw~~fSV~I~e~d-------v~~~~-~ 407 (491)
.|.+.++.+.-++.|.=+.+++.-..|||++| +|||.++..-++ -+-+-+-....|.|...+ +.+.. .
T Consensus 467 ~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G-~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~ 545 (590)
T cd03793 467 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG-IPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQY 545 (590)
T ss_pred chHHHhhhceEEEeccccCCCCcHHHHHHHcC-CCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHH
Confidence 58888999999999998888899999999999 699999875442 122223435677776322 22211 1
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHhhhceEEcCCCCC-CCHHHHHH
Q 011195 408 LINLVRNIKKDEWTHMRDRLKEVQRFFEFQFPSKE-GDAVQMIW 450 (491)
Q Consensus 408 l~~iL~~I~~e~v~~Mr~~l~~v~~~f~y~~p~~~-~DAf~~il 450 (491)
|.+++ +-+..+....|....++...|.|..-... ..|.++++
T Consensus 546 m~~~~-~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al 588 (590)
T cd03793 546 MYEFC-QLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLAL 588 (590)
T ss_pred HHHHh-CCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Confidence 23333 33545544555444477888888754322 24555554
No 64
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=78.72 E-value=9.5 Score=39.89 Aligned_cols=95 Identities=8% Similarity=0.054 Sum_probs=54.6
Q ss_pred hhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccc-hHHHHHhcCC
Q 011195 338 HQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGN-FLINLVRNIK 416 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~-~l~~iL~~I~ 416 (491)
++..+.+..+..++.|.-.......+.|||++|| |||.++.--. .+++.-. ..+.++. |..+.. .+.++|.. +
T Consensus 261 ~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~-PVI~s~~gg~--~e~i~~~-~~~~~~~-~~~~l~~~l~~~l~~-~ 334 (398)
T cd03796 261 ERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCGL-LVVSTRVGGI--PEVLPPD-MILLAEP-DVESIVRKLEEAISI-L 334 (398)
T ss_pred HHHHHHHHhCCEEEeCChhhccCHHHHHHHHcCC-CEEECCCCCc--hhheeCC-ceeecCC-CHHHHHHHHHHHHhC-h
Confidence 4677888889999888755556779999999997 6666664322 3444433 3344433 433211 24444443 2
Q ss_pred HHHHHHHHHHHHHhhhceEEcC
Q 011195 417 KDEWTHMRDRLKEVQRFFEFQF 438 (491)
Q Consensus 417 ~e~v~~Mr~~l~~v~~~f~y~~ 438 (491)
.++...+++...++..+|.|..
T Consensus 335 ~~~~~~~~~~~~~~~~~fs~~~ 356 (398)
T cd03796 335 RTGKHDPWSFHNRVKKMYSWED 356 (398)
T ss_pred hhhhhHHHHHHHHHHhhCCHHH
Confidence 2232233444455677776653
No 65
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=76.46 E-value=22 Score=39.16 Aligned_cols=92 Identities=10% Similarity=0.041 Sum_probs=53.5
Q ss_pred hhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEec----cc----ccccc-hHHH
Q 011195 340 ASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRT----SD----AVKGN-FLIN 410 (491)
Q Consensus 340 y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e----~d----v~~~~-~l~~ 410 (491)
..+.++.+.-++.|.=.......+.|||++|| |||.+|--.-| .+.|.-..-.+.++. .| +.... .|..
T Consensus 386 ~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~-PVI~~dv~~G~-~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ 463 (500)
T TIGR02918 386 LSEVYKDYELYLSASTSEGFGLTLMEAVGSGL-GMIGFDVNYGN-PTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVE 463 (500)
T ss_pred HHHHHHhCCEEEEcCccccccHHHHHHHHhCC-CEEEecCCCCC-HHHccCCCCEEEEeCCccccchhHHHHHHHHHHHH
Confidence 45666777777777645556788999999996 77776621112 233433333444542 12 21100 1333
Q ss_pred HHhcCCHHHHHHHHHHHHHhhhceEE
Q 011195 411 LVRNIKKDEWTHMRDRLKEVQRFFEF 436 (491)
Q Consensus 411 iL~~I~~e~v~~Mr~~l~~v~~~f~y 436 (491)
+| .++++.+|.++..+....|.+
T Consensus 464 ll---~~~~~~~~~~~a~~~a~~fs~ 486 (500)
T TIGR02918 464 YF---NSNDIDAFHEYSYQIAEGFLT 486 (500)
T ss_pred Hh---ChHHHHHHHHHHHHHHHhcCH
Confidence 33 466788998888887776554
No 66
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=72.41 E-value=8.8 Score=45.93 Aligned_cols=84 Identities=21% Similarity=0.233 Sum_probs=56.0
Q ss_pred EEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccc-hHHHHHhcCCHHHHHHHHHHH
Q 011195 349 FCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGN-FLINLVRNIKKDEWTHMRDRL 427 (491)
Q Consensus 349 FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~-~l~~iL~~I~~e~v~~Mr~~l 427 (491)
.++.|.=..+...-+.|||++| +|||.++.- ...+++.-..-.+.|+..|..... .|..+|. .++...+|.++.
T Consensus 574 VFV~PS~~EgFGLvlLEAMAcG-lPVVASdvG--G~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~--Dpelr~~m~~~g 648 (1050)
T TIGR02468 574 VFINPAFIEPFGLTLIEAAAHG-LPMVATKNG--GPVDIHRVLDNGLLVDPHDQQAIADALLKLVA--DKQLWAECRQNG 648 (1050)
T ss_pred eeeCCcccCCCCHHHHHHHHhC-CCEEEeCCC--CcHHHhccCCcEEEECCCCHHHHHHHHHHHhh--CHHHHHHHHHHH
Confidence 5555765666788999999999 599998753 233455555567778877765521 1333333 567788899888
Q ss_pred HHhhhceEEc
Q 011195 428 KEVQRFFEFQ 437 (491)
Q Consensus 428 ~~v~~~f~y~ 437 (491)
.+..+.|.|.
T Consensus 649 r~~v~~FSWe 658 (1050)
T TIGR02468 649 LKNIHLFSWP 658 (1050)
T ss_pred HHHHHHCCHH
Confidence 7766666554
No 67
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=70.27 E-value=40 Score=35.49 Aligned_cols=82 Identities=16% Similarity=0.295 Sum_probs=48.6
Q ss_pred hhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCC-----CCcEEEEEecccccccchHHHHHh
Q 011195 339 QASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILD-----YSEFCIFVRTSDAVKGNFLINLVR 413 (491)
Q Consensus 339 ~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iD-----w~~fSV~I~e~dv~~~~~l~~iL~ 413 (491)
+..+.|+.|.+++..+| ...+.||+++| +|||+.+.. |-++..+ =..+.+.+. +..+ +.+.|.
T Consensus 266 ~~~~~~~~aDl~I~k~g----g~tl~EA~a~G-~PvI~~~~~--pgqe~~N~~~~~~~G~g~~~~--~~~~---l~~~i~ 333 (391)
T PRK13608 266 HMNEWMASSQLMITKPG----GITISEGLARC-IPMIFLNPA--PGQELENALYFEEKGFGKIAD--TPEE---AIKIVA 333 (391)
T ss_pred hHHHHHHhhhEEEeCCc----hHHHHHHHHhC-CCEEECCCC--CCcchhHHHHHHhCCcEEEeC--CHHH---HHHHHH
Confidence 46678899999887544 23589999999 588887632 3322211 223344332 2222 333232
Q ss_pred cC--CHHHHHHHHHHHHHhhh
Q 011195 414 NI--KKDEWTHMRDRLKEVQR 432 (491)
Q Consensus 414 ~I--~~e~v~~Mr~~l~~v~~ 432 (491)
.+ .++++.+|+++..+..+
T Consensus 334 ~ll~~~~~~~~m~~~~~~~~~ 354 (391)
T PRK13608 334 SLTNGNEQLTNMISTMEQDKI 354 (391)
T ss_pred HHhcCHHHHHHHHHHHHHhcC
Confidence 22 56788899988866544
No 68
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=67.85 E-value=51 Score=34.99 Aligned_cols=94 Identities=13% Similarity=0.223 Sum_probs=54.8
Q ss_pred hhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCC-CCCCCcEEE-EEecccccccchHHHHHhcC
Q 011195 338 HQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYED-ILDYSEFCI-FVRTSDAVKGNFLINLVRNI 415 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d-~iDw~~fSV-~I~e~dv~~~~~l~~iL~~I 415 (491)
++..+.+.++++-+.-.=+.-....++|+|++|-|||.=..+ =|--| +++|+.=.. +..+++..-...+++|+. .
T Consensus 348 ~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~Sg--GP~lDIV~~~~G~~tGFla~t~~EYaE~iLkIv~-~ 424 (465)
T KOG1387|consen 348 EKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSG--GPLLDIVTPWDGETTGFLAPTDEEYAEAILKIVK-L 424 (465)
T ss_pred HHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCC--CCceeeeeccCCccceeecCChHHHHHHHHHHHH-c
Confidence 456778889999888877777789999999999999974432 12222 233432221 222222111112444444 3
Q ss_pred CHHHHHHHHHHHHHhhhce
Q 011195 416 KKDEWTHMRDRLKEVQRFF 434 (491)
Q Consensus 416 ~~e~v~~Mr~~l~~v~~~f 434 (491)
..++...||++-+.-.-+|
T Consensus 425 ~~~~r~~~r~~AR~s~~RF 443 (465)
T KOG1387|consen 425 NYDERNMMRRNARKSLARF 443 (465)
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 5555677777665544443
No 69
>PLN02939 transferase, transferring glycosyl groups
Probab=65.00 E-value=13 Score=44.19 Aligned_cols=94 Identities=15% Similarity=0.142 Sum_probs=57.5
Q ss_pred hhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCC--------cEEEEEecccccccc-hHHHH
Q 011195 341 SQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYS--------EFCIFVRTSDAVKGN-FLINL 411 (491)
Q Consensus 341 ~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~--------~fSV~I~e~dv~~~~-~l~~i 411 (491)
...++.|.+++.|.=+.+......|||++||+||+...+- ++ +-+.|++ .-.+.++..|..... .|...
T Consensus 851 h~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGG-L~-DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rA 928 (977)
T PLN02939 851 HSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGG-LN-DSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERA 928 (977)
T ss_pred HHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCC-Cc-ceeecCCccccccCCCceEEecCCCHHHHHHHHHHH
Confidence 3578899999999888888999999999999999754321 11 2223332 234455555554311 12233
Q ss_pred HhcC--CHHHHHHHHHHHHHhhhceEEcC
Q 011195 412 VRNI--KKDEWTHMRDRLKEVQRFFEFQF 438 (491)
Q Consensus 412 L~~I--~~e~v~~Mr~~l~~v~~~f~y~~ 438 (491)
|..+ .++.+.+|+++. +...|.|..
T Consensus 929 L~~~~~dpe~~~~L~~~a--m~~dFSWe~ 955 (977)
T PLN02939 929 FNYYKRKPEVWKQLVQKD--MNIDFSWDS 955 (977)
T ss_pred HHHhccCHHHHHHHHHHH--HHhcCCHHH
Confidence 3322 477788887753 345566653
No 70
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=63.30 E-value=10 Score=40.04 Aligned_cols=105 Identities=15% Similarity=0.087 Sum_probs=59.6
Q ss_pred hhhhcccCccEEEeeCCC-CCCchhHHHHHHhCceeEEeeCCcccCCCCC---CCCCcEEEEEecccccccchHHHHHhc
Q 011195 339 QASQGMHSSKFCLNIAGD-TPSSNRLFDAIASHCVPVIISDEIELPYEDI---LDYSEFCIFVRTSDAVKGNFLINLVRN 414 (491)
Q Consensus 339 ~y~~~m~~S~FCL~P~Gd-s~~s~RlfDAi~aGCIPVIisd~~~LPF~d~---iDw~~fSV~I~e~dv~~~~~l~~iL~~ 414 (491)
+..+.++.+..|+++... .....-+.|||++|| |||.+++.. -+.++ +.-..+.+. ..|..+ +.+.|..
T Consensus 312 el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~-PVI~g~~~~-~~~e~~~~~~~~g~~~~--~~d~~~---La~~l~~ 384 (425)
T PRK05749 312 ELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGV-PVISGPHTF-NFKEIFERLLQAGAAIQ--VEDAED---LAKAVTY 384 (425)
T ss_pred HHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCC-CEEECCCcc-CHHHHHHHHHHCCCeEE--ECCHHH---HHHHHHH
Confidence 566778888887775332 113456999999995 888876421 11111 111233433 334333 3333322
Q ss_pred C--CHHHHHHHHHHHHHhhhceEEcCCCCCCCHHHHHHHHHHHHhh
Q 011195 415 I--KKDEWTHMRDRLKEVQRFFEFQFPSKEGDAVQMIWQAVARKVP 458 (491)
Q Consensus 415 I--~~e~v~~Mr~~l~~v~~~f~y~~p~~~~DAf~~il~~l~~R~~ 458 (491)
+ .++...+|.++..+..... .+|.+.+++.+.+-++
T Consensus 385 ll~~~~~~~~m~~~a~~~~~~~--------~~~~~~~~~~l~~~l~ 422 (425)
T PRK05749 385 LLTDPDARQAYGEAGVAFLKQN--------QGALQRTLQLLEPYLP 422 (425)
T ss_pred HhcCHHHHHHHHHHHHHHHHhC--------ccHHHHHHHHHHHhcc
Confidence 1 4677788888776655332 3778888877765443
No 71
>PLN00142 sucrose synthase
Probab=62.47 E-value=24 Score=41.25 Aligned_cols=95 Identities=6% Similarity=0.073 Sum_probs=58.9
Q ss_pred hhcccC-ccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccc-hHHHHHhc--CC
Q 011195 341 SQGMHS-SKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGN-FLINLVRN--IK 416 (491)
Q Consensus 341 ~~~m~~-S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~-~l~~iL~~--I~ 416 (491)
...+.. +..+++|.=+.+...-+.|||++|| |||.++.--+ .++|.-..-.+.|+..|..... .|.+.|.. -.
T Consensus 660 yr~iadaaDVfVlPS~~EgFGLvvLEAMA~Gl-PVVATdvGG~--~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~D 736 (815)
T PLN00142 660 YRYIADTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCQGGP--AEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKED 736 (815)
T ss_pred HHHHHhhCCEEEeCCcccCCCHHHHHHHHcCC-CEEEcCCCCH--HHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCC
Confidence 343443 3455678767777889999999996 7877764322 2344445556777776655411 13333332 25
Q ss_pred HHHHHHHHHHH-HHhhhceEEcC
Q 011195 417 KDEWTHMRDRL-KEVQRFFEFQF 438 (491)
Q Consensus 417 ~e~v~~Mr~~l-~~v~~~f~y~~ 438 (491)
++.+.+|.++. .++..+|.|..
T Consensus 737 p~lr~~mg~~Ar~rv~e~FSWe~ 759 (815)
T PLN00142 737 PSYWNKISDAGLQRIYECYTWKI 759 (815)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHH
Confidence 77788888775 45667788764
No 72
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=61.40 E-value=86 Score=32.72 Aligned_cols=78 Identities=21% Similarity=0.365 Sum_probs=46.1
Q ss_pred hhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCC------CCCCCcEEEEEecccccccchHHHHH
Q 011195 339 QASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYED------ILDYSEFCIFVRTSDAVKGNFLINLV 412 (491)
Q Consensus 339 ~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d------~iDw~~fSV~I~e~dv~~~~~l~~iL 412 (491)
+..+.|..|...+.++|- .-+.|||++|| |||+.+.. |-++ +++ ....+.+ .|... +.+.+
T Consensus 275 ~~~~l~~aaDv~V~~~g~----~ti~EAma~g~-PvI~~~~~--pgqe~gn~~~i~~-~g~g~~~--~~~~~---la~~i 341 (382)
T PLN02605 275 NMEEWMGACDCIITKAGP----GTIAEALIRGL-PIILNGYI--PGQEEGNVPYVVD-NGFGAFS--ESPKE---IARIV 341 (382)
T ss_pred cHHHHHHhCCEEEECCCc----chHHHHHHcCC-CEEEecCC--CccchhhHHHHHh-CCceeec--CCHHH---HHHHH
Confidence 467888999988887762 24899999995 77777632 3322 122 3344443 23222 33333
Q ss_pred hcC---CHHHHHHHHHHHHH
Q 011195 413 RNI---KKDEWTHMRDRLKE 429 (491)
Q Consensus 413 ~~I---~~e~v~~Mr~~l~~ 429 (491)
..+ .++...+|+++.++
T Consensus 342 ~~ll~~~~~~~~~m~~~~~~ 361 (382)
T PLN02605 342 AEWFGDKSDELEAMSENALK 361 (382)
T ss_pred HHHHcCCHHHHHHHHHHHHH
Confidence 222 26777788876644
No 73
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=60.48 E-value=13 Score=37.67 Aligned_cols=84 Identities=14% Similarity=0.193 Sum_probs=48.3
Q ss_pred hhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCC-----CCCCCCcEEEEEeccc--ccccc-hHHH
Q 011195 339 QASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYE-----DILDYSEFCIFVRTSD--AVKGN-FLIN 410 (491)
Q Consensus 339 ~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~-----d~iDw~~fSV~I~e~d--v~~~~-~l~~ 410 (491)
++.+.|..+..++.+.| ...++|||++| +|||..+.-.-+-+ +.+.-....+.++..| ..+.. .|.+
T Consensus 243 ~~~~~l~~ad~~v~~~g----~~~l~Ea~~~g-~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ 317 (348)
T TIGR01133 243 NMAAAYAAADLVISRAG----ASTVAELAAAG-VPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLK 317 (348)
T ss_pred CHHHHHHhCCEEEECCC----hhHHHHHHHcC-CCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHH
Confidence 57788999999998776 24689999999 57777632100000 1222344555566554 33211 1333
Q ss_pred HHhcCCHHHHHHHHHHHHH
Q 011195 411 LVRNIKKDEWTHMRDRLKE 429 (491)
Q Consensus 411 iL~~I~~e~v~~Mr~~l~~ 429 (491)
.|. .++...+|.++..+
T Consensus 318 ll~--~~~~~~~~~~~~~~ 334 (348)
T TIGR01133 318 LLL--DPANLEAMAEAARK 334 (348)
T ss_pred HHc--CHHHHHHHHHHHHh
Confidence 332 46667777776643
No 74
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=56.19 E-value=24 Score=36.02 Aligned_cols=102 Identities=12% Similarity=0.190 Sum_probs=57.1
Q ss_pred hhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCC-cc------cCCCCCCCCCcEEEEEecccccccchHHHH
Q 011195 339 QASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDE-IE------LPYEDILDYSEFCIFVRTSDAVKGNFLINL 411 (491)
Q Consensus 339 ~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~-~~------LPF~d~iDw~~fSV~I~e~dv~~~~~l~~i 411 (491)
++.+.|..+..+++..| ..-++|||++|+ |||..+. .. ...+.+.+ ....+.++.+|+. ...|.+.
T Consensus 245 ~~~~~~~~~d~~i~~~g----~~~~~Ea~~~g~-Pvv~~~~~~~~~~~~~~~~~~i~~-~~~g~~~~~~~~~-~~~l~~~ 317 (357)
T PRK00726 245 DMAAAYAAADLVICRAG----ASTVAELAAAGL-PAILVPLPHAADDHQTANARALVD-AGAALLIPQSDLT-PEKLAEK 317 (357)
T ss_pred hHHHHHHhCCEEEECCC----HHHHHHHHHhCC-CEEEecCCCCCcCcHHHHHHHHHH-CCCEEEEEcccCC-HHHHHHH
Confidence 56788889999998766 245899999996 5555432 10 11122334 3456778776631 1224333
Q ss_pred HhcC--CHHHHHHHHHHHHHhhhceEEcCCCCCCCHHHHHHHHHHHHh
Q 011195 412 VRNI--KKDEWTHMRDRLKEVQRFFEFQFPSKEGDAVQMIWQAVARKV 457 (491)
Q Consensus 412 L~~I--~~e~v~~Mr~~l~~v~~~f~y~~p~~~~DAf~~il~~l~~R~ 457 (491)
++.+ .++...+|+++..+. . ..++.+.+.+.+...+
T Consensus 318 i~~ll~~~~~~~~~~~~~~~~------~----~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 318 LLELLSDPERLEAMAEAARAL------G----KPDAAERLADLIEELA 355 (357)
T ss_pred HHHHHcCHHHHHHHHHHHHhc------C----CcCHHHHHHHHHHHHh
Confidence 3322 356667777765332 2 2355666666555443
No 75
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=52.15 E-value=17 Score=39.37 Aligned_cols=91 Identities=12% Similarity=0.016 Sum_probs=57.8
Q ss_pred hhhhhhcccCccEEEeeCCCCCCchhHHHHHHhCce---eEEeeCCcccCCCCCCCCCcEEEEEecccccccch-HHHHH
Q 011195 337 IHQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCV---PVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNF-LINLV 412 (491)
Q Consensus 337 ~~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCI---PVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~~-l~~iL 412 (491)
.++..+.++.+.-++.|.-......-..|||++||= |||+++..-.+-+ ..-.+.|+..|+.+... |.+.|
T Consensus 351 ~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~-----~~~g~lv~p~d~~~la~ai~~~l 425 (460)
T cd03788 351 REELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE-----LSGALLVNPYDIDEVADAIHRAL 425 (460)
T ss_pred HHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh-----cCCCEEECCCCHHHHHHHHHHHH
Confidence 346778888888888876554457778999999996 6999975322211 12356777777655221 22333
Q ss_pred hcCCHHHHHHHHHHHHHhhhc
Q 011195 413 RNIKKDEWTHMRDRLKEVQRF 433 (491)
Q Consensus 413 ~~I~~e~v~~Mr~~l~~v~~~ 433 (491)
.-++++..+|.++..+....
T Consensus 426 -~~~~~e~~~~~~~~~~~v~~ 445 (460)
T cd03788 426 -TMPLEERRERHRKLREYVRT 445 (460)
T ss_pred -cCCHHHHHHHHHHHHHHHHh
Confidence 34667777776666655443
No 76
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=49.01 E-value=18 Score=37.69 Aligned_cols=40 Identities=15% Similarity=0.156 Sum_probs=29.8
Q ss_pred hhhhhcccCccEEEeeCCCC-----CCchhHHHHHHhCceeEEeeC
Q 011195 338 HQASQGMHSSKFCLNIAGDT-----PSSNRLFDAIASHCVPVIISD 378 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds-----~~s~RlfDAi~aGCIPVIisd 378 (491)
++..+.++.+..|+.|.-.+ .....++|+|++|+ |||-++
T Consensus 265 ~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~-PVVat~ 309 (373)
T cd04950 265 KELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGK-PVVATP 309 (373)
T ss_pred HHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCC-CEEecC
Confidence 45777889999999996432 22457999999995 788654
No 77
>PF06024 DUF912: Nucleopolyhedrovirus protein of unknown function (DUF912); InterPro: IPR009261 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf78; it is a family of uncharacterised viral proteins.
Probab=48.42 E-value=8.6 Score=33.18 Aligned_cols=24 Identities=29% Similarity=0.618 Sum_probs=19.7
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhc
Q 011195 16 FLFFLLAITSILFSLSWFFVLRST 39 (491)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~ 39 (491)
.|+.+|+|..+|+++.+|++||--
T Consensus 67 ~lls~v~IlVily~IyYFVILRer 90 (101)
T PF06024_consen 67 SLLSFVCILVILYAIYYFVILRER 90 (101)
T ss_pred HHHHHHHHHHHHhhheEEEEEecc
Confidence 467778888889999999999944
No 78
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=48.36 E-value=19 Score=32.82 Aligned_cols=40 Identities=15% Similarity=0.080 Sum_probs=31.3
Q ss_pred hhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCC
Q 011195 339 QASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDE 379 (491)
Q Consensus 339 ~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~ 379 (491)
.+...+..|..+++|......+..++|||++|| |||.++.
T Consensus 174 ~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~-pvi~s~~ 213 (229)
T cd01635 174 LLALLLAAADVFVLPSLREGFGLVVLEAMACGL-PVIATDV 213 (229)
T ss_pred HHHHHhhcCCEEEecccccCcChHHHHHHhCCC-CEEEcCC
Confidence 455555669999999988788999999999986 5555554
No 79
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=47.52 E-value=50 Score=33.24 Aligned_cols=75 Identities=17% Similarity=0.311 Sum_probs=47.4
Q ss_pred CCeEEEEecceecCCCcchHHHHHHHhhcC-C--CeEEEeCcccC------------------CChhhhhhcccCccEEE
Q 011195 293 RPILLYFQGAIYRKDGGSVRQELFYLLKDE-K--DVHFSFGSVQK------------------NGIHQASQGMHSSKFCL 351 (491)
Q Consensus 293 R~~L~~FaG~~~~~~~~~iR~~L~~~~~~~-~--d~~~~~g~~~~------------------~~~~~y~~~m~~S~FCL 351 (491)
+++|++|-|.- ...+-..+++.+... . .+.+.+|.... ....+..+.|..|...+
T Consensus 171 ~~iLi~~GG~d----~~~~~~~~l~~l~~~~~~~~i~vv~G~~~~~~~~l~~~~~~~~~i~~~~~~~~m~~lm~~aDl~I 246 (279)
T TIGR03590 171 RRVLVSFGGAD----PDNLTLKLLSALAESQINISITLVTGSSNPNLDELKKFAKEYPNIILFIDVENMAELMNEADLAI 246 (279)
T ss_pred CeEEEEeCCcC----CcCHHHHHHHHHhccccCceEEEEECCCCcCHHHHHHHHHhCCCEEEEeCHHHHHHHHHHCCEEE
Confidence 56788887753 223334455555432 2 23455664311 12346778999999999
Q ss_pred eeCCCCCCchhHHHHHHhCceeEEee
Q 011195 352 NIAGDTPSSNRLFDAIASHCVPVIIS 377 (491)
Q Consensus 352 ~P~Gds~~s~RlfDAi~aGCIPVIis 377 (491)
+..| + -++|++.+| +|+|+-
T Consensus 247 s~~G-~----T~~E~~a~g-~P~i~i 266 (279)
T TIGR03590 247 GAAG-S----TSWERCCLG-LPSLAI 266 (279)
T ss_pred ECCc-h----HHHHHHHcC-CCEEEE
Confidence 9877 3 299999999 777764
No 80
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=46.67 E-value=48 Score=36.06 Aligned_cols=87 Identities=10% Similarity=0.020 Sum_probs=55.3
Q ss_pred hhhhhhcccCccEEEeeCCCCCCchhHHHHHHhCcee----EEeeCCcccCCCCCCCCCcEEEEEecccccccch-HHHH
Q 011195 337 IHQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVP----VIISDEIELPYEDILDYSEFCIFVRTSDAVKGNF-LINL 411 (491)
Q Consensus 337 ~~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIP----VIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~~-l~~i 411 (491)
.++....++.+.-|+.|.=......-..|||++|+ | ||+++..-.+ +.+. -++.|+..|...... |.+.
T Consensus 346 ~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~-P~~g~vVlS~~~G~~--~~l~---~gllVnP~d~~~lA~aI~~a 419 (456)
T TIGR02400 346 REELMALYRAADVGLVTPLRDGMNLVAKEYVAAQD-PKDGVLILSEFAGAA--QELN---GALLVNPYDIDGMADAIARA 419 (456)
T ss_pred HHHHHHHHHhCcEEEECccccccCccHHHHHHhcC-CCCceEEEeCCCCCh--HHhC---CcEEECCCCHHHHHHHHHHH
Confidence 35678889999999987644445778999999996 8 8998753222 1122 267778877765221 3333
Q ss_pred HhcCCHHHHHHHHHHHHHh
Q 011195 412 VRNIKKDEWTHMRDRLKEV 430 (491)
Q Consensus 412 L~~I~~e~v~~Mr~~l~~v 430 (491)
|. .++++..++.+++.+.
T Consensus 420 L~-~~~~er~~r~~~~~~~ 437 (456)
T TIGR02400 420 LT-MPLEEREERHRAMMDK 437 (456)
T ss_pred Hc-CCHHHHHHHHHHHHHH
Confidence 33 4666666555555443
No 81
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=46.12 E-value=71 Score=37.40 Aligned_cols=90 Identities=6% Similarity=0.065 Sum_probs=57.8
Q ss_pred ccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccccc-hHHHHHhc--CCHHHHHHH
Q 011195 347 SKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGN-FLINLVRN--IKKDEWTHM 423 (491)
Q Consensus 347 S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~-~l~~iL~~--I~~e~v~~M 423 (491)
+..+++|.=+.+...-+.|||++|| |||.++.--+ .+.|.-..-.+.|+..|..... .|.++|.. -.++.+.+|
T Consensus 644 adVfV~PS~~EpFGLvvLEAMAcGl-PVVAT~~GG~--~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~m 720 (784)
T TIGR02470 644 KGIFVQPALYEAFGLTVLEAMTCGL-PTFATRFGGP--LEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKI 720 (784)
T ss_pred CcEEEECCcccCCCHHHHHHHHcCC-CEEEcCCCCH--HHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 3566778878888999999999997 5555653221 2334445556677777765521 13333321 267788888
Q ss_pred HHHHH-HhhhceEEcCC
Q 011195 424 RDRLK-EVQRFFEFQFP 439 (491)
Q Consensus 424 r~~l~-~v~~~f~y~~p 439 (491)
.++.+ ++..+|.|..-
T Consensus 721 s~~a~~rV~~~FSW~~~ 737 (784)
T TIGR02470 721 SQGGLQRIYEKYTWKIY 737 (784)
T ss_pred HHHHHHHHHHhCCHHHH
Confidence 88754 56788888753
No 82
>PLN02316 synthase/transferase
Probab=45.13 E-value=40 Score=40.55 Aligned_cols=37 Identities=16% Similarity=0.122 Sum_probs=33.0
Q ss_pred hcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeC
Q 011195 342 QGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISD 378 (491)
Q Consensus 342 ~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd 378 (491)
..++.+.+.+.|.=..+......|||++||+||+-..
T Consensus 915 ~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~v 951 (1036)
T PLN02316 915 LIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKT 951 (1036)
T ss_pred HHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcC
Confidence 5788999999998888899999999999999999543
No 83
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=40.00 E-value=58 Score=30.88 Aligned_cols=41 Identities=22% Similarity=0.154 Sum_probs=30.0
Q ss_pred hhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCc
Q 011195 339 QASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEI 380 (491)
Q Consensus 339 ~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~ 380 (491)
+..+.++.+...+.|.-.......+.||+++| +|||.++.-
T Consensus 269 ~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g-~pvi~~~~~ 309 (381)
T COG0438 269 ELAELLASADVFVLPSLSEGFGLVLLEAMAAG-TPVIASDVG 309 (381)
T ss_pred HHHHHHHhCCEEEeccccccchHHHHHHHhcC-CcEEECCCC
Confidence 45566777889999854333344499999999 999887653
No 84
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=37.13 E-value=30 Score=29.62 Aligned_cols=24 Identities=29% Similarity=0.393 Sum_probs=10.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhhh
Q 011195 13 SRNFLFFLLAITSILFSLSWFFVLR 37 (491)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~ 37 (491)
|+++|+..+.+|++|+| |+-..++
T Consensus 3 SK~~llL~l~LA~lLli-sSevaa~ 26 (95)
T PF07172_consen 3 SKAFLLLGLLLAALLLI-SSEVAAR 26 (95)
T ss_pred hhHHHHHHHHHHHHHHH-HhhhhhH
Confidence 44455444444444444 4433333
No 85
>PRK10125 putative glycosyl transferase; Provisional
Probab=36.43 E-value=68 Score=34.10 Aligned_cols=63 Identities=14% Similarity=0.095 Sum_probs=45.0
Q ss_pred hhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccccc
Q 011195 338 HQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDAVK 404 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~ 404 (491)
.+..+.++.+...+.|.-......-+.|||++| +|||.+|---.| ++++-. -.+.++..|+..
T Consensus 298 ~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G-~PVVat~~gG~~--Eiv~~~-~G~lv~~~d~~~ 360 (405)
T PRK10125 298 RKLMSALNQMDALVFSSRVDNYPLILCEALSIG-VPVIATHSDAAR--EVLQKS-GGKTVSEEEVLQ 360 (405)
T ss_pred HHHHHHHHhCCEEEECCccccCcCHHHHHHHcC-CCEEEeCCCChH--HhEeCC-cEEEECCCCHHH
Confidence 356777888888888876666788999999999 588888753332 345433 467788877654
No 86
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=36.01 E-value=1.8e+02 Score=33.71 Aligned_cols=61 Identities=11% Similarity=0.008 Sum_probs=40.6
Q ss_pred hhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCCCCCCCcEEEEEecccc
Q 011195 339 QASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDILDYSEFCIFVRTSDA 402 (491)
Q Consensus 339 ~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv 402 (491)
+....|..+...+.|.-.......+.|||++|| |||.++.--. .++|.-..-.+.++..|.
T Consensus 584 dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~-PVVat~~gG~--~EiV~dg~~GlLv~~~d~ 644 (694)
T PRK15179 584 RVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGV-PVVTTLAGGA--GEAVQEGVTGLTLPADTV 644 (694)
T ss_pred hHHHHHHhcCEEEeccccccchHHHHHHHHcCC-eEEEECCCCh--HHHccCCCCEEEeCCCCC
Confidence 455667777777777655567889999999994 8888774322 234444444566776554
No 87
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=32.66 E-value=58 Score=32.84 Aligned_cols=83 Identities=8% Similarity=0.173 Sum_probs=47.6
Q ss_pred hhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCc-------ccCCCCCCCCCcEEEEEecc--cccccchH
Q 011195 338 HQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEI-------ELPYEDILDYSEFCIFVRTS--DAVKGNFL 408 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~-------~LPF~d~iDw~~fSV~I~e~--dv~~~~~l 408 (491)
.++.+.|..+.+.+++.|. .-+.|||.+|+ |||..+.- ..+.+.+.+ ....+.++.. |..+ +
T Consensus 244 ~~~~~~l~~ad~~v~~sg~----~t~~Eam~~G~-Pvv~~~~~~~~~~~~~~~~~~l~~-~g~g~~v~~~~~~~~~---l 314 (350)
T cd03785 244 DDMAAAYAAADLVISRAGA----STVAELAALGL-PAILIPLPYAADDHQTANARALVK-AGAAVLIPQEELTPER---L 314 (350)
T ss_pred hhHHHHHHhcCEEEECCCH----hHHHHHHHhCC-CEEEeecCCCCCCcHHHhHHHHHh-CCCEEEEecCCCCHHH---H
Confidence 3567788899998887762 34899999996 56654321 111222233 3445566544 3333 4
Q ss_pred HHHHhcC--CHHHHHHHHHHHHH
Q 011195 409 INLVRNI--KKDEWTHMRDRLKE 429 (491)
Q Consensus 409 ~~iL~~I--~~e~v~~Mr~~l~~ 429 (491)
.+.|+.+ .++...+|+++.++
T Consensus 315 ~~~i~~ll~~~~~~~~~~~~~~~ 337 (350)
T cd03785 315 AAALLELLSDPERLKAMAEAARS 337 (350)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHh
Confidence 3333322 46677777776543
No 88
>PLN02275 transferase, transferring glycosyl groups
Probab=32.55 E-value=1.5e+02 Score=30.65 Aligned_cols=76 Identities=12% Similarity=0.113 Sum_probs=47.4
Q ss_pred CeEEEEecceecCCCcchHHHHHHHhhcC--CCeEEEeCcccCCChhhhhhcccCccEEEeeCCC---CCCchhHHHHHH
Q 011195 294 PILLYFQGAIYRKDGGSVRQELFYLLKDE--KDVHFSFGSVQKNGIHQASQGMHSSKFCLNIAGD---TPSSNRLFDAIA 368 (491)
Q Consensus 294 ~~L~~FaG~~~~~~~~~iR~~L~~~~~~~--~d~~~~~g~~~~~~~~~y~~~m~~S~FCL~P~Gd---s~~s~RlfDAi~ 368 (491)
.+-+.+.|. |..|+.|.++.++. .++.+.-|-. ..+++.+.|+.+..|+.|... ......++|||+
T Consensus 261 ~i~l~ivG~------G~~~~~l~~~~~~~~l~~v~~~~~~~---~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA 331 (371)
T PLN02275 261 RLLFIITGK------GPQKAMYEEKISRLNLRHVAFRTMWL---EAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFG 331 (371)
T ss_pred CeEEEEEeC------CCCHHHHHHHHHHcCCCceEEEcCCC---CHHHHHHHHHhCCEEEEeccccccccccHHHHHHHH
Confidence 466777884 45677776666543 2333221212 235678889999988875321 113567999999
Q ss_pred hCceeEEeeCC
Q 011195 369 SHCVPVIISDE 379 (491)
Q Consensus 369 aGCIPVIisd~ 379 (491)
+|| |||.++.
T Consensus 332 ~G~-PVVa~~~ 341 (371)
T PLN02275 332 CGL-PVCAVSY 341 (371)
T ss_pred CCC-CEEEecC
Confidence 995 8888763
No 89
>PF13974 YebO: YebO-like protein
Probab=32.36 E-value=22 Score=29.64 Aligned_cols=22 Identities=23% Similarity=0.486 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHhhhhhcCC
Q 011195 20 LLAITSILFSLSWFFVLRSTGS 41 (491)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~ 41 (491)
+..++.++.++-|||+-|-+.+
T Consensus 3 ~~~~~~lv~livWFFVnRaSvR 24 (80)
T PF13974_consen 3 VSVLVLLVGLIVWFFVNRASVR 24 (80)
T ss_pred ehHHHHHHHHHHHHHHHHHHHh
Confidence 4456778888999999996544
No 90
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=30.55 E-value=3.2e+02 Score=27.44 Aligned_cols=135 Identities=14% Similarity=0.174 Sum_probs=76.3
Q ss_pred CCCCCCeEEEEecceecCCCcchHHHHHHHhhcCCC-e--EEEeCc--ccCC----Ch---hhhhhcccCccEEEeeCCC
Q 011195 289 EFDSRPILLYFQGAIYRKDGGSVRQELFYLLKDEKD-V--HFSFGS--VQKN----GI---HQASQGMHSSKFCLNIAGD 356 (491)
Q Consensus 289 ~~~~R~~L~~FaG~~~~~~~~~iR~~L~~~~~~~~d-~--~~~~g~--~~~~----~~---~~y~~~m~~S~FCL~P~Gd 356 (491)
+...|.-.++|+|+.. ++..|+.|++...+.++ + .+.... ..|. .+ ..-++...+-||=+...|.
T Consensus 79 pW~~K~~~a~WRG~~~---~~~~R~~Lv~~~~~~p~~~da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yKyli~~dG~ 155 (256)
T smart00672 79 KWSDKNAYAYWRGNPT---VASERLDLIKCNQSSPELVNARITIQDWPGKCDGEEDAPGFKKSPLEEQCKHKYKINIEGV 155 (256)
T ss_pred CccccCcCccccCCCC---CCcchHHHHHHhcCCcccceeEEEEecCCCCChHHhcccCcCCCCHHHHhhcceEEecCCc
Confidence 4567888899999872 22389999987766553 2 222110 0111 00 0123444678999999999
Q ss_pred CCCchhHHHHHHhCceeEEeeCCcccCC-CCCCCCCcEEEEEec--cc--ccccchHHHHHhcCCHHHHHHHHHHHHHhh
Q 011195 357 TPSSNRLFDAIASHCVPVIISDEIELPY-EDILDYSEFCIFVRT--SD--AVKGNFLINLVRNIKKDEWTHMRDRLKEVQ 431 (491)
Q Consensus 357 s~~s~RlfDAi~aGCIPVIisd~~~LPF-~d~iDw~~fSV~I~e--~d--v~~~~~l~~iL~~I~~e~v~~Mr~~l~~v~ 431 (491)
+ .|-|+.=-|.+++|++.....+.-=| +.+.+|.-|. -|.. +| +.+ .++.+++ -+++-+++-++..+..
T Consensus 156 ~-~S~rl~~~l~~~Svvl~~~~~~~~~~~~~L~P~~HYv-Pv~~d~sd~~l~~---~i~~~~~-~~~~a~~Ia~~~~~~~ 229 (256)
T smart00672 156 A-WSVRLKYILACDSVVLKVKPEYYEFFSRGLQPWVHYW-PIKSDLSCRELKE---AVDWGNE-HDKKAQEIGKRGSEFI 229 (256)
T ss_pred c-chhhHHHHHhcCceEEEeCCchhHHHHhcccCccceE-EeeCCCchhhHHH---HHHHHHh-CHHHHHHHHHHHHHHH
Confidence 8 58899999999999888775432112 1234555542 2322 12 333 4444444 3444455555554433
Q ss_pred h
Q 011195 432 R 432 (491)
Q Consensus 432 ~ 432 (491)
+
T Consensus 230 ~ 230 (256)
T smart00672 230 Q 230 (256)
T ss_pred H
Confidence 3
No 91
>PLN03194 putative disease resistance protein; Provisional
Probab=29.90 E-value=5.2e+02 Score=25.00 Aligned_cols=142 Identities=13% Similarity=0.122 Sum_probs=77.3
Q ss_pred CCeEEEEecceecCCCcchHHHHHHHhhcCCCeEEE-eCcccCCC--hhhhhhcccCccEEEeeCC--C--CCCc-hhHH
Q 011195 293 RPILLYFQGAIYRKDGGSVRQELFYLLKDEKDVHFS-FGSVQKNG--IHQASQGMHSSKFCLNIAG--D--TPSS-NRLF 364 (491)
Q Consensus 293 R~~L~~FaG~~~~~~~~~iR~~L~~~~~~~~d~~~~-~g~~~~~~--~~~y~~~m~~S~FCL~P~G--d--s~~s-~Rlf 364 (491)
=+.+++|+|.-- ..+.=..|.+.+....-..+. ......+. .....+.+..|++|++.-. + +.|- .-+.
T Consensus 27 yDVFISFrG~Dt---R~~FvshL~~aL~~~GI~vF~D~~el~~G~~i~~~L~~AIeeSri~IvVfS~~Ya~S~WCLdEL~ 103 (187)
T PLN03194 27 CDVFINHRGIDT---KRTIATLLYDHLSRLNLRPFLDNKNMKPGDKLFDKINSAIRNCKVGVAVFSPRYCESYFCLHELA 103 (187)
T ss_pred CcEEEeCCCccc---cccHHHHHHHHHHHCCCEEEEcCccccCCCcHHHHHHHHHHhCeEEEEEECCCcccchhHHHHHH
Confidence 346888888531 122334566565544322221 11222111 1246677889999988532 2 2222 2233
Q ss_pred HHHHhC--ceeEEeeCCcccCCCCCCCCCcEEEEEecccccccchHHHHHhcCCHHHHHHHHHHHHHhhhceEEcCCC--
Q 011195 365 DAIASH--CVPVIISDEIELPYEDILDYSEFCIFVRTSDAVKGNFLINLVRNIKKDEWTHMRDRLKEVQRFFEFQFPS-- 440 (491)
Q Consensus 365 DAi~aG--CIPVIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~~l~~iL~~I~~e~v~~Mr~~l~~v~~~f~y~~p~-- 440 (491)
.++..+ -|||+. .|++.||.+. .=..-+.+++.+-|++|.++...--|....
T Consensus 104 ~I~e~~~~ViPIFY-------------------~VdPsdVr~q-----~~~~~~~e~v~~Wr~AL~~va~l~G~~~~~~~ 159 (187)
T PLN03194 104 LIMESKKRVIPIFC-------------------DVKPSQLRVV-----DNGTCPDEEIRRFNWALEEAKYTVGLTFDSLK 159 (187)
T ss_pred HHHHcCCEEEEEEe-------------------cCCHHHhhcc-----ccCCCCHHHHHHHHHHHHHHhccccccCCCCC
Confidence 333332 466662 1333444330 001236789999999999988775554332
Q ss_pred -CCCCHHHHHHHHHHHHhhhhH
Q 011195 441 -KEGDAVQMIWQAVARKVPAMR 461 (491)
Q Consensus 441 -~~~DAf~~il~~l~~R~~~~r 461 (491)
...+.++.|++.+.+++-.|-
T Consensus 160 ~~e~e~i~~iv~~v~k~l~~~~ 181 (187)
T PLN03194 160 GNWSEVVTMASDAVIKNLIELE 181 (187)
T ss_pred CCHHHHHHHHHHHHHHHHHHHh
Confidence 245789999999999887653
No 92
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=29.24 E-value=3.9e+02 Score=27.31 Aligned_cols=59 Identities=24% Similarity=0.217 Sum_probs=36.7
Q ss_pred chHHHHHHHhhcCCCeEEEeCcccCCChhhhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeC
Q 011195 310 SVRQELFYLLKDEKDVHFSFGSVQKNGIHQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISD 378 (491)
Q Consensus 310 ~iR~~L~~~~~~~~d~~~~~g~~~~~~~~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd 378 (491)
.++..+.+.+.....+.+ .+.. +..++...|..+.+.+.+.|- -+.||+++|| |||...
T Consensus 242 ~~~~~~~~~~~~~~~v~~-~~~~---~~~~~~~~l~~ad~vv~~Sg~-----~~~EA~a~g~-PvI~~~ 300 (365)
T TIGR00236 242 VVREPLHKHLGDSKRVHL-IEPL---EYLDFLNLAANSHLILTDSGG-----VQEEAPSLGK-PVLVLR 300 (365)
T ss_pred HHHHHHHHHhCCCCCEEE-ECCC---ChHHHHHHHHhCCEEEECChh-----HHHHHHHcCC-CEEECC
Confidence 455555555533333333 2322 234677888999998877642 3799999985 788753
No 93
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=23.98 E-value=63 Score=28.84 Aligned_cols=16 Identities=25% Similarity=0.638 Sum_probs=6.7
Q ss_pred HHHHHHHHHHHHHHHH
Q 011195 17 LFFLLAITSILFSLSW 32 (491)
Q Consensus 17 ~~~~~~~~~~~~~~~~ 32 (491)
||++|+++.||++++.
T Consensus 4 l~~iii~~i~l~~~~~ 19 (130)
T PF12273_consen 4 LFAIIIVAILLFLFLF 19 (130)
T ss_pred eHHHHHHHHHHHHHHH
Confidence 4444444444444333
No 94
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=23.59 E-value=1.4e+02 Score=35.07 Aligned_cols=87 Identities=7% Similarity=0.001 Sum_probs=54.1
Q ss_pred hhhhhcccCccEEEeeCCCCCCchhHHHHHHhCcee----EEeeCCcccCCCCCCCCCcEEEEEecccccccch-HHHHH
Q 011195 338 HQASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVP----VIISDEIELPYEDILDYSEFCIFVRTSDAVKGNF-LINLV 412 (491)
Q Consensus 338 ~~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIP----VIisd~~~LPF~d~iDw~~fSV~I~e~dv~~~~~-l~~iL 412 (491)
+++...++.+.-|+.|+=.....--..|||++|+ | ||+++---.+ +.+ ..-++.|+..|+..... |...|
T Consensus 367 ~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~-p~~gvlVlSe~~G~~--~~l--~~~allVnP~D~~~lA~AI~~aL 441 (797)
T PLN03063 367 NYLCALYAITDVMLVTSLRDGMNLVSYEFVACQK-AKKGVLVLSEFAGAG--QSL--GAGALLVNPWNITEVSSAIKEAL 441 (797)
T ss_pred HHHHHHHHhCCEEEeCccccccCcchhhHheeec-CCCCCEEeeCCcCch--hhh--cCCeEEECCCCHHHHHHHHHHHH
Confidence 4677888999999998743334567999999998 5 8887642111 112 33478888888765322 33444
Q ss_pred hcCCHHHHHHHHHHHHHh
Q 011195 413 RNIKKDEWTHMRDRLKEV 430 (491)
Q Consensus 413 ~~I~~e~v~~Mr~~l~~v 430 (491)
. .++++..++.+.+.+.
T Consensus 442 ~-m~~~er~~r~~~~~~~ 458 (797)
T PLN03063 442 N-MSDEERETRHRHNFQY 458 (797)
T ss_pred h-CCHHHHHHHHHHHHHh
Confidence 3 4555555544444443
No 95
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=23.19 E-value=1.2e+02 Score=31.04 Aligned_cols=104 Identities=13% Similarity=0.137 Sum_probs=54.3
Q ss_pred hhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCc-ccCCC--CCCCCCcEEE------------EEeccccc
Q 011195 339 QASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEI-ELPYE--DILDYSEFCI------------FVRTSDAV 403 (491)
Q Consensus 339 ~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~-~LPF~--d~iDw~~fSV------------~I~e~dv~ 403 (491)
+..+.++.|..++++.|. ...||+++|| |||+.... .+|+. +.+....+.. -+.+.+.
T Consensus 254 ~~~~~~~~aDl~v~~sG~-----~~lEa~a~G~-PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~- 326 (380)
T PRK00025 254 QKREAMAAADAALAASGT-----VTLELALLKV-PMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEA- 326 (380)
T ss_pred cHHHHHHhCCEEEECccH-----HHHHHHHhCC-CEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCC-
Confidence 356778888898887653 3559999995 77776543 12211 0011111110 0111111
Q ss_pred ccchHHHHHhcC--CHHHHHHHHHHHHHhhhceEEcCCCCCCCHHHHHHHHHHHH
Q 011195 404 KGNFLINLVRNI--KKDEWTHMRDRLKEVQRFFEFQFPSKEGDAVQMIWQAVARK 456 (491)
Q Consensus 404 ~~~~l~~iL~~I--~~e~v~~Mr~~l~~v~~~f~y~~p~~~~DAf~~il~~l~~R 456 (491)
+...+.+.+..+ .++...+|.++..++.+.. . .+|.+-+++.+.+-
T Consensus 327 ~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~---~----~~a~~~~~~~i~~~ 374 (380)
T PRK00025 327 TPEKLARALLPLLADGARRQALLEGFTELHQQL---R----CGADERAAQAVLEL 374 (380)
T ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh---C----CCHHHHHHHHHHHH
Confidence 111233333322 5677778888876666543 1 26777777766553
No 96
>PF05366 Sarcolipin: Sarcolipin; InterPro: IPR008028 Sarcolipin is a 31 amino acid integral membrane protein that regulates Ca-ATPase activity in skeletal muscle [].; GO: 0030234 enzyme regulator activity, 0016020 membrane; PDB: 1JDM_A.
Probab=22.56 E-value=91 Score=20.88 Aligned_cols=23 Identities=30% Similarity=0.540 Sum_probs=17.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHhh
Q 011195 13 SRNFLFFLLAITSILFSLSWFFV 35 (491)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~ 35 (491)
+.+-||.=|++..|--||-|+++
T Consensus 4 strel~lnftvvlitvilmwllv 26 (31)
T PF05366_consen 4 STRELFLNFTVVLITVILMWLLV 26 (31)
T ss_dssp -SSSSHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHhhhHHHHHHHHHHHHH
Confidence 44567778888888888899875
No 97
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=22.39 E-value=2.1e+02 Score=29.55 Aligned_cols=80 Identities=15% Similarity=0.219 Sum_probs=43.0
Q ss_pred hhhhcccCccEEEeeCCCCCCchhHHHHHHhCceeEEeeCCcccCCCC-----CCCCCcEEEEEecccccccc-hHHHHH
Q 011195 339 QASQGMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYED-----ILDYSEFCIFVRTSDAVKGN-FLINLV 412 (491)
Q Consensus 339 ~y~~~m~~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIisd~~~LPF~d-----~iDw~~fSV~I~e~dv~~~~-~l~~iL 412 (491)
+..+.|+.|...+..+| ...+.|||++|+ |||+.+.. |-.+ .+.-..+.+.+ .|..+.. .|.++|
T Consensus 266 ~~~~l~~~aD~~v~~~g----g~t~~EA~a~g~-PvI~~~~~--~g~~~~n~~~~~~~G~~~~~--~~~~~l~~~i~~ll 336 (380)
T PRK13609 266 NIDELFRVTSCMITKPG----GITLSEAAALGV-PVILYKPV--PGQEKENAMYFERKGAAVVI--RDDEEVFAKTEALL 336 (380)
T ss_pred hHHHHHHhccEEEeCCC----chHHHHHHHhCC-CEEECCCC--CCcchHHHHHHHhCCcEEEE--CCHHHHHHHHHHHH
Confidence 35677888886655333 345889999996 68776532 2111 11112334433 3332211 133333
Q ss_pred hcCCHHHHHHHHHHHHH
Q 011195 413 RNIKKDEWTHMRDRLKE 429 (491)
Q Consensus 413 ~~I~~e~v~~Mr~~l~~ 429 (491)
. .++.+.+|.++..+
T Consensus 337 ~--~~~~~~~m~~~~~~ 351 (380)
T PRK13609 337 Q--DDMKLLQMKEAMKS 351 (380)
T ss_pred C--CHHHHHHHHHHHHH
Confidence 3 46778888887655
No 98
>KOG3185 consensus Translation initiation factor 6 (eIF-6) [Translation, ribosomal structure and biogenesis]
Probab=20.75 E-value=86 Score=30.45 Aligned_cols=32 Identities=19% Similarity=0.496 Sum_probs=28.2
Q ss_pred CccEEEeeCCCCCCchhHHHHHHhCceeEEee
Q 011195 346 SSKFCLNIAGDTPSSNRLFDAIASHCVPVIIS 377 (491)
Q Consensus 346 ~S~FCL~P~Gds~~s~RlfDAi~aGCIPVIis 377 (491)
.-+|||+..|.+-.=-+.|||=+.+.|||+-.
T Consensus 20 TNtYclva~ggS~nfys~~e~el~d~IPiV~t 51 (245)
T KOG3185|consen 20 TNTYCLVAIGGSENFYSAFEAELGDVIPIVHT 51 (245)
T ss_pred ccceEEEEecCchhHHHHHHHHhcCccceEEe
Confidence 46799999999888889999999999999844
Done!